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ONTOLOGY REPORT - ANNOTATIONS

Term:ciliary membrane
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Accession:GO:0060170 term browser browse the term
Definition:The portion of the plasma membrane surrounding a cilium.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: cilial membrane;   cilium membrane
 narrow_synonym: flagellar membrane;   flagellum membrane
 alt_id: GO:0020017

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ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 located_in ISO (PMID:28053034) ARUK-UCL PMID:28053034 NCBI chrNW_004955469:6,933,208...7,026,179
Ensembl chrNW_004955469:6,929,092...7,026,758 		JBrowse link
G Arl13b ARF like GTPase 13B located_in ISO (PMID:21976698), (PMID:23817546), (PMID:27727273), (PMID:29038301) UniProt PMID:21976698 PMID:23817546 PMID:27727273 PMID:29038301 NCBI chrNW_004955407:3,402,214...3,477,839
Ensembl chrNW_004955407:3,402,908...3,460,105 		JBrowse link
G Bbip1 BBSome interacting protein 1 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955485:518,161...530,575 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955422:18,825,756...18,843,820
Ensembl chrNW_004955422:18,825,756...18,844,036 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955433:14,266,190...14,321,780
Ensembl chrNW_004955433:14,266,190...14,296,929 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in
part_of		 ISO (PMID:17574030)
(PMID:19081074)		 BHF-UCL
ComplexPortal		 PMID:17574030 PMID:19081074 NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955449:5,043,034...5,061,806
Ensembl chrNW_004955449:5,041,748...5,061,806 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955428:18,682,072...18,724,560
Ensembl chrNW_004955428:18,681,856...18,724,560 		JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955582:222,926...628,514
Ensembl chrNW_004955582:222,919...628,115 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004955565:879,560...1,242,727
Ensembl chrNW_004955565:879,830...1,237,692 		JBrowse link
G Cd24 CD24 molecule located_in ISO (PMID:11978835) MGI PMID:11978835 NCBI chrNW_004955411:32,270,881...32,275,236
Ensembl chrNW_004955411:32,270,881...32,275,236 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cltb clathrin light chain B located_in ISO (PMID:20427320) MGI PMID:20427320 NCBI chrNW_004955408:28,692,933...28,717,566
Ensembl chrNW_004955408:28,692,933...28,717,566 		JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in ISO (PMID:28053034) ARUK-UCL PMID:28053034 NCBI chrNW_004955498:7,250,514...7,257,701
Ensembl chrNW_004955498:7,250,514...7,257,701 		JBrowse link
G Drd1 dopamine receptor D1 located_in ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595 		JBrowse link
G Drd2 dopamine receptor D2 located_in ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573 		JBrowse link
G Drd5 dopamine receptor D5 located_in ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004955514:5,450,495...5,452,282 JBrowse link
G Efcab7 EF-hand calcium binding domain 7 located_in ISO (PMID:24582806) UniProt PMID:24582806 NCBI chrNW_004955423:26,473,310...26,510,704
Ensembl chrNW_004955423:26,474,568...26,509,196 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (PMID:20427320) MGI PMID:20427320 NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098 		JBrowse link
G Evc EvC ciliary complex subunit 1 located_in ISO (PMID:24582806) UniProt PMID:24582806 NCBI chrNW_004955514:4,279,603...4,330,897
Ensembl chrNW_004955514:4,279,073...4,331,131 		JBrowse link
G Evc2 EvC ciliary complex subunit 2 located_in ISO (PMID:24582806) UniProt PMID:24582806 NCBI chrNW_004955514:4,332,624...4,430,844
Ensembl chrNW_004955514:4,333,066...4,430,902 		JBrowse link
G Gpi glucose-6-phosphate isomerase located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004955468:3,980,999...4,007,553
Ensembl chrNW_004955468:3,980,999...4,008,652 		JBrowse link
G Gpr157 G protein-coupled receptor 157 located_in ISO (PMID:27142930) UniProt PMID:27142930 NCBI chrNW_004955486:4,172,515...4,188,887
Ensembl chrNW_004955486:4,172,515...4,189,137 		JBrowse link
G Gpr88 G protein-coupled receptor 88 located_in ISO (PMID:23936473) UniProt PMID:23936473 NCBI chrNW_004955435:5,268,746...5,271,237 JBrowse link
G Iqce IQ motif containing E located_in ISO (PMID:24582806) UniProt PMID:24582806 NCBI chrNW_004955460:12,676,649...12,724,613 JBrowse link
G Mchr1 melanin concentrating hormone receptor 1 located_in ISO (PMID:22139371) MGI PMID:22139371 NCBI chrNW_004955413:26,343,771...26,347,374
Ensembl chrNW_004955413:26,343,759...26,347,520 		JBrowse link
G Mosmo modulator of smoothened located_in ISO (PMID:29290584) UniProt PMID:29290584 NCBI chrNW_004955493:760,729...771,996 JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:38247840) UniProt PMID:38247840 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:27760766) UniProt PMID:27760766 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO (PMID:29038301) MGI PMID:29038301 NCBI chrNW_004955524:1,403,811...1,416,005
Ensembl chrNW_004955524:1,403,811...1,416,005 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha located_in ISO (PMID:22207244) UniProt PMID:22207244 NCBI chrNW_004955413:4,000,083...4,023,596
Ensembl chrNW_004955413:3,999,613...4,023,596 		JBrowse link
G Septin2 septin 2 located_in ISO (PMID:20558667) UniProt PMID:20558667 NCBI chrNW_004955542:401,081...444,304
Ensembl chrNW_004955542:401,081...443,962 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 part_of
located_in		 ISO PMID:18596612 CACAO
BHF-UCL		 PMID:18596612 RGD:8554451 NCBI chrNW_004955422:15,295,800...15,818,067
Ensembl chrNW_004955422:15,295,772...15,814,711 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in
part_of		 ISO PMID:18596612 BHF-UCL
CACAO		 PMID:18596612 RGD:8554451 NCBI chrNW_004955413:33,660,025...33,714,649
Ensembl chrNW_004955413:33,660,022...33,712,796 		JBrowse link
G Smo smoothened, frizzled class receptor located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004955413:23,677,693...23,683,939
Ensembl chrNW_004955413:23,677,693...23,683,939 		JBrowse link
G Tmem17 transmembrane protein 17 located_in ISO (PMID:22179047) UniProt PMID:22179047 NCBI chrNW_004955424:21,627,889...21,634,798
Ensembl chrNW_004955424:21,627,151...21,637,041 		JBrowse link
G Tmem231 transmembrane protein 231 located_in ISO (PMID:22179047) UniProt PMID:22179047 NCBI chrNW_004955484:2,011,000...2,027,763
Ensembl chrNW_004955484:2,011,000...2,027,763 		JBrowse link
G Tmem67 transmembrane protein 67 located_in ISO (PMID:17185389) UniProt PMID:17185389 NCBI chrNW_004955417:10,097,488...10,137,959
Ensembl chrNW_004955417:10,097,472...10,138,644 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats located_in ISO (PMID:22678063) MGI PMID:22678063 NCBI chrNW_004955407:41,513,538...41,566,931
Ensembl chrNW_004955407:41,513,829...41,656,564 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523 		JBrowse link
ciliary necklace term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004955469:6,933,208...7,026,179
Ensembl chrNW_004955469:6,929,092...7,026,758 		JBrowse link
G Gnal G protein subunit alpha L ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004955402:1,182,515...1,249,301
Ensembl chrNW_004955402:1,181,133...1,248,616 		JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH domain containing 1 located_in ISO (PMID:25686250) UniProt PMID:25686250 NCBI chrNW_004955422:20,302,409...20,324,591
Ensembl chrNW_004955422:20,302,655...20,324,591 		JBrowse link
G Ehd3 EH domain containing 3 located_in ISO (PMID:25686250) UniProt PMID:25686250 NCBI chrNW_004955469:12,953,800...12,984,296
Ensembl chrNW_004955469:12,953,645...12,984,430 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in ISO (PMID:25686250) UniProt PMID:25686250 NCBI chrNW_004955442:19,419,381...19,446,782
Ensembl chrNW_004955442:19,419,821...19,446,665 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in ISO PMID:10377344
(PMID:16980309)		 UniProt PMID:10377344 PMID:16980309 RGD:632392 NCBI chrNW_004955498:7,250,514...7,257,701
Ensembl chrNW_004955498:7,250,514...7,257,701 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 located_in ISO PMID:10377344
(PMID:16980309)		 UniProt PMID:10377344 PMID:16980309 RGD:632392 NCBI chrNW_004955414:21,977,996...21,986,349
Ensembl chrNW_004955414:21,977,996...21,986,441 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin related family member 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004955510:3,709,206...3,727,448
Ensembl chrNW_004955510:3,708,723...3,728,926 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004955443:615,061...649,693
Ensembl chrNW_004955443:639,096...649,606 		JBrowse link
G Gnb1 G protein subunit beta 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004955486:9,165,850...9,192,306
Ensembl chrNW_004955486:9,165,850...9,193,066 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in ISO PMID:9153227
(PMID:21598940)		 UniProt PMID:9153227 PMID:21598940 RGD:1599625 NCBI chrNW_004955467:8,938,057...8,949,684
Ensembl chrNW_004955467:8,938,057...8,949,684 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20089132 RGD:5131540 NCBI chrNW_004955484:4,353,950...4,419,891
Ensembl chrNW_004955484:4,353,950...4,420,873 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:27613864)
(PMID:27509380), (PMID:27613864)		 UniProt PMID:27509380 PMID:27613864 NCBI chrNW_004955506:5,751,963...5,764,767
Ensembl chrNW_004955506:5,751,963...5,764,766 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) MGI PMID:10414956 NCBI chrNW_004955500:8,106,371...8,117,221
Ensembl chrNW_004955500:8,107,847...8,117,290 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) MGI PMID:15790565 NCBI chrNW_004955466:2,506,641...2,521,506
Ensembl chrNW_004955466:2,508,338...2,520,903 		JBrowse link
G Rho rhodopsin located_in ISO (PMID:19934218) RGD
UniProt		 PMID:2209754 PMID:19934218 RGD:6893561 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12777
    cellular anatomical structure 12621
      membrane 5116
        organelle membrane 1995
          bounding membrane of organelle 1115
            ciliary membrane 58
              ciliary necklace 2
              ciliary pocket membrane 3
              cone photoreceptor disc membrane 0
              non-motile cilium membrane 3
              photoreceptor outer segment membrane 11
Path 2
Term Annotations click to browse term
  cellular_component 12777
    cellular anatomical structure 12621
      cell periphery 3733
        plasma membrane 3402
          plasma membrane region 1259
            cell projection membrane 306
              ciliary membrane 58
                ciliary necklace 2
                ciliary pocket membrane 3
                cone photoreceptor disc membrane 0
                non-motile cilium membrane 3
                photoreceptor outer segment membrane 11
paths to the root