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ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary membrane
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Accession:GO:0060170 term browser browse the term
Definition:The portion of the plasma membrane surrounding a cilium.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: cilial membrane;   cilium membrane
 narrow_synonym: flagellar membrane;   flagellum membrane
 alt_id: GO:0020017



show annotations for term's descendants           Sort by:
 
ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 located_in ISO
IEA
(MGI:5817509|PMID:28053034)
GO_REF:0000107
RGD
Ensembl
PMID:28053034 GO_REF:0000107 MGI:5817509 NCBI chr 6:27,100,089...27,203,686
Ensembl chr 6:27,124,828...27,203,686
JBrowse link
G Arl13a ADP ribosylation factor like GTPase 13A is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,380,370...97,406,704
Ensembl chr  X:97,380,390...97,406,702
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B located_in
is_active_in
ISO
IBA
(MGI:5528615|PMID:23817546), (MGI:5553238|PMID:21976698), (MGI:5805574|PMID:27727273)
PMID:21873635
RGD PMID:21976698 PMID:23817546 PMID:27727273 PMID:21873635 MGI:5528615 MGI:5553238 MGI:5805574, RGD:13792537 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197
JBrowse link
G Bbip1 BBSome interacting protein 1 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 1:252,943,589...252,959,578
Ensembl chr 1:252,945,557...252,959,352
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in IEA
ISO
GO_REF:0000044
(PMID:19081074)
UniProt
RGD
PMID:19081074 GO_REF:0000044 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (PMID:17574030), (PMID:19081074) RGD PMID:17574030 PMID:19081074 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in IEA
ISO
GO_REF:0000044
(PMID:19081074)
UniProt
RGD
PMID:19081074 GO_REF:0000044 NCBI chr 3:54,410,429...54,431,831
Ensembl chr 3:54,410,775...54,431,829
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 8:21,013,865...21,437,934
Ensembl chr 8:21,013,944...21,437,930
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in IDA PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Cd24 CD24 molecule located_in ISO (MGI:2178911|PMID:11978835) RGD PMID:11978835 MGI:2178911 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 located_in ISO (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cltb clathrin, light chain B located_in ISO (MGI:4830632|PMID:20427320) RGD PMID:20427320 MGI:4830632 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in ISO (MGI:5817509|PMID:28053034) RGD PMID:28053034 MGI:5817509 NCBI chr  X:149,696,999...149,715,051 JBrowse link
G Drd1 dopamine receptor D1 located_in IEA
ISO
GO_REF:0000107
(PMID:20531939)
Ensembl
RGD
PMID:20531939 GO_REF:0000107 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 located_in ISO (PMID:20531939) RGD PMID:20531939 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd5 dopamine receptor D5 located_in ISO
IEA
(PMID:20531939)
GO_REF:0000107
RGD
Ensembl
PMID:20531939 GO_REF:0000107 NCBI chr14:72,489,347...72,490,774
Ensembl chr14:72,489,347...72,490,774
JBrowse link
G Efcab7 EF-hand calcium binding domain 7 located_in ISO (MGI:5908325|PMID:24582806) RGD PMID:24582806 MGI:5908325 NCBI chr 5:114,525,403...114,576,130
Ensembl chr 5:114,525,167...114,576,129
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (MGI:4830632|PMID:20427320) RGD PMID:20427320 MGI:4830632 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Evc EvC ciliary complex subunit 1 located_in
is_active_in
ISO
IBA
(MGI:5908325|PMID:24582806)
PMID:21873635
RGD PMID:24582806 PMID:21873635 MGI:5908325, RGD:13792537 NCBI chr14:73,456,181...73,498,955
Ensembl chr14:73,456,222...73,498,099
JBrowse link
G Evc2 EvC ciliary complex subunit 2 located_in
is_active_in
ISO
IBA
(MGI:5908325|PMID:24582806)
PMID:21873635
RGD PMID:24582806 PMID:21873635 MGI:5908325, RGD:13792537 NCBI chr14:73,366,832...73,454,539
Ensembl chr14:73,367,963...73,454,516
JBrowse link
G Ffar4 free fatty acid receptor 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:235,873,576...235,891,597
Ensembl chr 1:235,873,576...235,891,597
JBrowse link
G Gpi glucose-6-phosphate isomerase located_in ISO (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086
JBrowse link
G Gpr157 G protein-coupled receptor 157 located_in ISS
ISO
GO_REF:0000024
(MGI:5825412|PMID:27142930)
UniProt
RGD
PMID:27142930 GO_REF:0000024 MGI:5825412 NCBI chr 5:160,550,703...160,566,432
Ensembl chr 5:160,550,713...160,566,432
JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421
JBrowse link
G Gucy2e guanylate cyclase 2E located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:152,739,775...152,774,474
Ensembl chr 1:152,739,775...152,774,473
JBrowse link
G Iqce IQ motif containing E located_in ISO (MGI:5908325|PMID:24582806) RGD PMID:24582806 MGI:5908325 NCBI chr12:13,943,290...13,982,708
Ensembl chr12:13,943,487...13,982,693
JBrowse link
G LOC108348053 cyclic nucleotide-gated olfactory channel located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Mchr1 melanin-concentrating hormone receptor 1 located_in ISO (MGI:5306530|PMID:22139371) RGD PMID:22139371 MGI:5306530 NCBI chr 7:112,761,554...112,764,746
Ensembl chr 7:112,761,554...112,764,032
JBrowse link
G Mosmo modulator of smoothened located_in
is_active_in
ISO
IBA
(MGI:6111022|PMID:29290584)
PMID:21873635
RGD PMID:29290584 PMID:21873635 MGI:6111022, RGD:13792537 NCBI chr 1:175,217,658...175,288,521 JBrowse link
G Mxra8 matrix remodeling associated 8 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:166,448,919...166,453,645
Ensembl chr 5:166,449,154...166,453,636
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (MGI:5883145|PMID:27760766) RGD PMID:27760766 MGI:5883145 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:243,032,853...243,070,031
Ensembl chr 1:243,032,913...243,070,031
JBrowse link
G Prom2 prominin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:114,747,654...114,761,787
Ensembl chr 3:114,747,654...114,761,787
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha located_in ISO
IEA
ISS
(PMID:22207244)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22207244 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:158,122,962...158,146,184
Ensembl chr 4:158,122,962...158,146,181
JBrowse link
G Septin2 septin 2 located_in ISS
ISO
GO_REF:0000024
(MGI:4462072|PMID:20558667)
UniProt
RGD
PMID:20558667 GO_REF:0000024 MGI:4462072 NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 part_of
located_in
IDA PMID:18596612 CACAO
BHF-UCL
PMID:18596612 PMID:18596612 RGD:8554451, RGD:8554451 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in
part_of
IDA PMID:18596612 BHF-UCL
CACAO
PMID:18596612 PMID:18596612 RGD:8554451, RGD:8554451 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO
GO_REF:0000107
(MGI:5300833|PMID:22179047)
Ensembl
RGD
PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Sstr3 somatostatin receptor 3 located_in ISO (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769
JBrowse link
G Tas2r108 taste receptor, type 2, member 108 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:69,287,667...69,288,581
Ensembl chr 4:69,287,667...69,288,581
JBrowse link
G Tmem17 transmembrane protein 17 located_in ISS
ISO
GO_REF:0000024
(MGI:5300833|PMID:22179047)
UniProt
RGD
PMID:22179047 GO_REF:0000024 MGI:5300833 NCBI chr14:96,483,648...96,524,238
Ensembl chr14:96,518,793...96,524,233
JBrowse link
G Tmem231 transmembrane protein 231 located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000044
PMID:21873635
(MGI:5300833|PMID:22179047)
GO_REF:0000024
UniProt
RGD
PMID:22179047 PMID:21873635 GO_REF:0000024 GO_REF:0000044 MGI:5300833, RGD:13792537 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
JBrowse link
G Tmem67 transmembrane protein 67 located_in ISO
IEA
(PMID:17185389)
GO_REF:0000107
RGD
Ensembl
PMID:17185389 GO_REF:0000107 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO (MGI:5430693|PMID:22678063) RGD PMID:22678063 MGI:5430693 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in ISO (PMID:19081074) RGD PMID:19081074 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Txndc15 thioredoxin domain containing 15 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:8,898,074...8,910,538
Ensembl chr17:8,845,084...8,910,539
JBrowse link
G Umod uromodulin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH-domain containing 1 located_in ISO
ISS
(PMID:25686250)
GO_REF:0000024
RGD
UniProt
PMID:25686250 GO_REF:0000024 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212
JBrowse link
G Ehd3 EH-domain containing 3 located_in ISO
ISS
IEA
(PMID:25686250)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25686250 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,640,861...21,665,601
Ensembl chr 6:21,639,290...21,665,236
JBrowse link
G Snap29 synaptosome associated protein 29 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25686250)
UniProt
Ensembl
RGD
PMID:25686250 GO_REF:0000024 GO_REF:0000107 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in ISO (MGI:3814988|PMID:18654668) RGD PMID:18654668 MGI:3814988 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396
JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO
GO_REF:0000107
(MGI:3814988|PMID:18654668)
Ensembl
RGD
PMID:18654668 GO_REF:0000107 MGI:3814988 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065
JBrowse link
G Gnb1 G protein subunit beta 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in IEA
ISO
IDA
GO_REF:0000107
(MGI:5049799|PMID:21598940)
PMID:9153227
Ensembl
RGD
PMID:21598940 PMID:9153227 GO_REF:0000107 MGI:5049799, RGD:1599625 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067
JBrowse link
G Pde6a phosphodiesterase 6A is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,676,863...54,749,644
Ensembl chr18:54,676,863...54,748,816
JBrowse link
G Pde6b phosphodiesterase 6B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
JBrowse link
G Pde6g phosphodiesterase 6G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,721,502...105,727,204 JBrowse link
G Pde6h phosphodiesterase 6H is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969
JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IDA RGD PMID:20089132 RGD:5131540 NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513
JBrowse link
G Prcd photoreceptor disc component located_in ISO
IEA
(PMID:27613864)
(MGI:5812604|PMID:27613864), (MGI:6271388|PMID:27509380)
GO_REF:0000107
RGD
Ensembl
PMID:27509380 PMID:27613864 GO_REF:0000107 MGI:5812604 MGI:6271388 NCBI chr10:101,887,192...101,907,647 JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Prph peripherin located_in ISO (MGI:1343017|PMID:10414956) RGD PMID:10414956 MGI:1343017 NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136
JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252
JBrowse link
G Rho rhodopsin located_in IDA
IEA
ISO
ISS
GO_REF:0000107
(PMID:19934218)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19934218 PMID:2209754 GO_REF:0000024 GO_REF:0000107, RGD:6893561 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (MGI:3814988|PMID:18654668) RGD PMID:18654668 MGI:3814988 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      membrane 9945
        organelle membrane 2931
          bounding membrane of organelle 1543
            ciliary membrane 67
              ciliary necklace 0
              ciliary pocket membrane 3
              cone photoreceptor disc membrane 0
              non-motile cilium membrane 0
              photoreceptor outer segment membrane 15
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      cell periphery 6703
        plasma membrane 6245
          plasma membrane region 1351
            cell projection membrane 361
              ciliary membrane 67
                ciliary necklace 0
                ciliary pocket membrane 3
                cone photoreceptor disc membrane 0
                non-motile cilium membrane 0
                photoreceptor outer segment membrane 15
paths to the root