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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of posttranscriptional gene silencing
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Accession:GO:0060148 term browser browse the term
Definition:Any process that increases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.


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positive regulation of gene silencing by miRNA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002945.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:89,967,031...90,000,386 JBrowse link
G Ajuba ajuba LIM protein ISO
IBA
ISS
(PMID:20616046)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20616046, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:17531811) RGD PMID:17531811 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Fmr1 FMRP translational regulator 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4868681|PMID:20159450)
(PMID:17057366)
Ensembl
UniProt
RGD
PMID:17057366, PMID:20159450 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4868681 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 ISO
IEA
ISS
(PMID:17057366)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17057366 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:120,529,716...120,570,356
Ensembl chr 2:120,512,899...120,570,355
JBrowse link
G Limd1 LIM domains containing 1 ISO
IBA
ISS
(PMID:20616046)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20616046, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:132,553,218...132,598,826
Ensembl chr 8:132,553,218...132,598,812
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IMP PMID:24676391 BHF-UCL PMID:24676391 RGD:10400879 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Pum1 pumilio RNA-binding family member 1 ISO (PMID:20818387), (PMID:22345517) RGD PMID:20818387, PMID:22345517 NCBI chr 5:148,781,239...148,911,776
Ensembl chr 5:148,781,222...148,911,803
JBrowse link
G Pum2 pumilio RNA-binding family member 2 ISO (PMID:22345517) RGD PMID:22345517 NCBI chr 6:33,786,184...33,865,693
Ensembl chr 6:33,786,197...33,865,687
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:23820254) RGD PMID:23820254 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Trim71 tripartite motif containing 71 ISO (MGI:MGI:4438512|PMID:19898466) RGD PMID:19898466 MGI:MGI:4438512 NCBI chr 8:122,553,015...122,604,787
Ensembl chr 8:122,553,015...122,604,787
JBrowse link
G Wtip WT1 interacting protein ISO (PMID:20616046) RGD PMID:20616046 NCBI chr 1:89,966,496...89,999,892 JBrowse link
G Zfp36 zinc finger protein 36 ISO
ISS
(PMID:15766526)
GO_REF:0000024
RGD
UniProt
PMID:15766526 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
positive regulation of miRNA mediated inhibition of translation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 IEA
ISO
GO_REF:0000107
(PMID:23409027)
Ensembl
RGD
PMID:23409027 GO_REF:0000107 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
G Ddx6 DEAD-box helicase 6 ISO (PMID:27342281) RGD PMID:27342281 NCBI chr 8:48,924,768...48,961,394
Ensembl chr 8:48,925,604...48,958,026
JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 ISO (PMID:28487484) RGD PMID:28487484 NCBI chr 9:94,310,476...94,325,445
Ensembl chr 9:94,307,852...94,336,831
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:27342281), (PMID:28487484), (PMID:32354837) RGD PMID:24335285, PMID:27342281, PMID:28487484, PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:23409027) RGD PMID:23409027 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (PMID:23820254) RGD PMID:23820254 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B ISO (PMID:32354837) RGD PMID:32354837 NCBI chr 7:121,930,610...122,147,934
Ensembl chr 7:121,930,615...122,147,934
JBrowse link
positive regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:18548003)
Ensembl
RGD
PMID:18548003 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (PMID:18548003) RGD PMID:18548003 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:21673316) RGD PMID:21673316 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Il6 interleukin 6 ISO (PMID:27252421) RGD PMID:27252421 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Lin28a lin-28 homolog A ISO (MGI:MGI:5294254|PMID:21962509) RGD PMID:21962509 MGI:MGI:5294254 NCBI chr 5:152,230,343...152,247,873
Ensembl chr 5:152,230,343...152,247,332
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO
IEA
(PMID:24375836)
GO_REF:0000107
RGD
Ensembl
PMID:24375836 GO_REF:0000107 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 ISO (PMID:24375836) RGD PMID:24375836 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
G Myocd myocardin ISO
IEA
(MGI:MGI:6414695|PMID:28342807)
GO_REF:0000107
RGD
Ensembl
PMID:28342807 GO_REF:0000107, MGI:MGI:6414695 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 ISO MGI:MGI:2385930 (MGI:MGI:5574156|PMID:24349493) RGD PMID:24349493 MGI:MGI:5574156 NCBI chr 2:5,569,954...5,579,894
Ensembl chr 2:5,569,935...5,579,894
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 ISO (PMID:26020802) RGD PMID:26020802 NCBI chr17:31,537,580...31,569,904
Ensembl chr17:31,537,591...31,569,904
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (PMID:18548003) RGD PMID:18548003 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:22578566), (PMID:26100857) RGD PMID:22578566, PMID:26100857 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
positive regulation of RNA interference term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpo5 exportin 5 ISO (PMID:15613540) RGD PMID:15613540 NCBI chr 9:17,125,201...17,163,170
Ensembl chr 9:17,125,201...17,163,170
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20022
    positive regulation of biological process 6654
      positive regulation of cellular process 6150
        positive regulation of posttranscriptional gene silencing 32
          positive regulation of RNA interference 1
          positive regulation of gene silencing by miRNA + 31
          viral triggering of virus induced gene silencing 0
Path 2
Term Annotations click to browse term
  biological_process 20022
    biological regulation 13767
      regulation of biological process 13069
        negative regulation of biological process 5683
          negative regulation of metabolic process 3304
            negative regulation of macromolecule metabolic process 3040
              negative regulation of gene expression 2158
                gene silencing 256
                  posttranscriptional gene silencing 140
                    regulation of posttranscriptional gene silencing 52
                      positive regulation of posttranscriptional gene silencing 32
                        positive regulation of RNA interference 1
                        positive regulation of gene silencing by miRNA + 31
                        viral triggering of virus induced gene silencing 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.