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ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell development
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Accession:GO:0060117 term browser browse the term
Definition:The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
Synonyms:exact_synonym: auditory hair cell development


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auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG10 ALG10 alpha-1,2-glucosyltransferase acts_upstream_of_or_within ISO (PMID:24303013) MGI PMID:24303013 NCBI chr 5:40,416,335...40,423,026 JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487) Ensembl
MGI		 PMID:19414487 GO_REF:0000107 NCBI chr13:91,104,850...91,152,397
Ensembl chr13:91,106,207...91,148,031 		JBrowse link
G ELMOD3 ELMO domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31628468) MGI
Ensembl		 PMID:31628468 GO_REF:0000107 NCBI chr 3:59,369,816...59,401,193
Ensembl chr 3:59,369,820...59,401,151 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,675,323...1,989,110
Ensembl chr 2:1,675,360...1,989,111 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834 		JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within ISO (PMID:24334608) MGI PMID:24334608 NCBI chr14:112,088,332...112,111,348 JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:12808454) MGI
GO_Central		 PMID:12808454 GO_REF:0000033 NCBI chr13:13,933,552...14,043,108
Ensembl chr13:13,933,711...14,043,058 		JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22105175) Ensembl
MGI		 PMID:22105175 GO_REF:0000107 NCBI chr 1:225,714,601...226,111,045
Ensembl chr 1:225,929,109...226,109,469 		JBrowse link
G TOMT transmembrane O-methyltransferase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:6,681,150...6,686,321 JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:19363478) MGI PMID:19363478 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,780...4,803,543 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:824,925...852,360
Ensembl chr 4:825,062...852,664 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:112,670,529...112,762,870
Ensembl chr 8:112,670,533...112,762,858 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:19936227) MGI PMID:19936227 NCBI chr11:56,508,713...56,522,270
Ensembl chr11:56,508,767...56,522,197 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:41,593,793...41,646,777
Ensembl chr 2:41,593,802...41,647,247 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr 3:78,435,154...78,726,313
Ensembl chr 3:78,268,922...78,856,893 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chr 2:74,540,868...74,568,402
Ensembl chr 2:74,540,870...74,567,837 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128 		JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:15537665)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:12121736)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:11322776)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr14:74,267,547...74,734,623
Ensembl chr14:74,223,089...74,733,834 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr 7:40,683,044...40,808,017
Ensembl chr 7:40,682,907...40,863,886 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr13:91,104,850...91,152,397
Ensembl chr13:91,106,207...91,148,031 		JBrowse link
G CLRN2 clarin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:12,551,855...12,564,512
Ensembl chr 8:12,551,892...12,564,379 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 2:147,215,061...147,231,792
Ensembl chr 2:147,216,279...147,232,478 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905332)
(PMID:17876667), (PMID:23217710)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr 7:31,624,050...31,642,269
Ensembl chr 7:31,624,450...31,642,268 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr10:49,392,119...49,623,575 JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr15:76,432,429...76,855,443
Ensembl chr15:76,401,963...76,855,429 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr 9:11,251,187...11,337,618
Ensembl chr 9:11,249,075...11,666,296 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr12:6,466,138...6,483,539
Ensembl chr12:6,466,121...6,483,548 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:11124469)
(PMID:15537665)
(PMID:10978835)
(PMID:23217710)
(PMID:16887306)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr14:95,530,168...96,388,032 JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within ISO (PMID:24334608) MGI PMID:24334608 NCBI chr14:112,088,332...112,111,348 JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,307,692...83,434,133
Ensembl chr13:83,308,007...83,434,128 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (PMID:29961578) UniProt PMID:29961578 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:19,609,358...19,842,345
Ensembl chr 7:19,609,358...19,838,093 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:824,925...852,360
Ensembl chr 4:825,062...852,664 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:112,670,529...112,762,870
Ensembl chr 8:112,670,533...112,762,858 		JBrowse link
G SOD1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:10464373), (PMID:10466888) UniProt
MGI
Ensembl		 PMID:10464373 PMID:10466888 GO_REF:0000024 GO_REF:0000107 NCBI chr13:195,326,573...195,335,273
Ensembl chr13:195,326,649...195,337,729 		JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007)
(PMID:18849963)		 Ensembl
MGI		 PMID:18849963 PMID:30801007 GO_REF:0000107 NCBI chr 1:127,830,759...127,852,392
Ensembl chr 1:127,835,622...127,852,339 		JBrowse link
G TECTA tectorin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007) Ensembl
MGI		 PMID:30801007 GO_REF:0000107 NCBI chr 9:48,120,786...48,286,275
Ensembl chr 9:48,211,798...48,286,274
Ensembl chr 9:48,211,798...48,286,274 		JBrowse link
G TPRN taperin acts_upstream_of_or_within ISO (PMID:30380417) MGI PMID:30380417
G TRIOBP TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chr 5:10,066,080...10,132,668
Ensembl chr 5:10,066,086...10,126,491 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:27117407) Ensembl
GO_Central
MGI		 PMID:27117407 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:255,009,765...255,095,281
Ensembl chr 1:255,009,771...255,095,222 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18933
    developmental process 6753
      anatomical structure development 6337
        inner ear development 254
          inner ear receptor cell differentiation 95
            inner ear auditory receptor cell differentiation 66
              auditory receptor cell development 38
                auditory receptor cell morphogenesis + 30
Path 2
Term Annotations click to browse term
  biological_process 18933
    developmental process 6753
      anatomical structure development 6337
        multicellular organism development 5118
          system development 4464
            nervous system development 2803
              neurogenesis 2080
                generation of neurons 1779
                  neuron differentiation 1702
                    mechanoreceptor differentiation 103
                      inner ear receptor cell differentiation 95
                        inner ear receptor cell development 71
                          auditory receptor cell development 38
                            auditory receptor cell morphogenesis + 30
paths to the root