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ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell development
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Accession:GO:0060117 term browser browse the term
Definition:The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
Synonyms:exact_synonym: auditory hair cell development


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auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10b ALG10 alpha-1,2-glucosyltransferase acts_upstream_of_or_within IMP (PMID:24303013) MGI PMID:24303013 NCBI chr15:90,108,506...90,117,674
Ensembl chr15:90,108,514...90,117,674 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within IMP (PMID:19414487) MGI PMID:19414487 NCBI chr 3:58,751,449...58,792,633
Ensembl chr 3:58,751,449...58,792,761 		JBrowse link
G Elmod3 ELMO/CED-12 domain containing 3 acts_upstream_of_or_within IMP (PMID:31628468) MGI PMID:31628468 NCBI chr 6:72,542,905...72,575,396
Ensembl chr 6:72,542,905...72,575,396 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15630379) MGI PMID:15630379 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in IMP (PMID:26084842) MGI PMID:26084842 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in IMP (PMID:23533177) CACAO PMID:23533177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within IMP (PMID:24334608) MGI PMID:24334608 NCBI chr19:45,015,346...45,048,273
Ensembl chr19:45,015,345...45,034,156 		JBrowse link
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12808454) GO_Central
MGI		 PMID:12808454 GO_REF:0000033 NCBI chr14:7,669,819...7,766,808
Ensembl chr14:7,669,823...7,767,484 		JBrowse link
G Tmc1 transmembrane channel-like gene family 1 acts_upstream_of_or_within IMP (PMID:22105175) MGI PMID:22105175 NCBI chr19:20,760,820...20,931,566
Ensembl chr19:20,760,822...20,931,566 		JBrowse link
G Tomt transmembrane O-methyltransferase involved_in IMP (PMID:18794526) UniProt PMID:18794526 NCBI chr 7:101,549,010...101,555,572
Ensembl chr 7:101,547,577...101,555,566 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within IMP (PMID:19363478) MGI PMID:19363478 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within IMP (PMID:19936227) MGI PMID:19936227 NCBI chr14:110,984,770...110,992,640
Ensembl chr14:110,986,012...110,992,581 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within IMP (PMID:24302887) MGI PMID:24302887 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in IMP (PMID:35175278) UniProt PMID:35175278 NCBI chr10:81,464,352...81,483,446
Ensembl chr10:81,464,374...81,483,444 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:11875276) MGI PMID:11875276 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) acts_upstream_of_or_within IMP
IGI		 (PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:11322776)
(PMID:15537665)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within IMP (PMID:17021174) MGI PMID:17021174 NCBI chr17:44,445,671...44,591,059
Ensembl chr17:44,445,659...44,591,059 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within IMP (PMID:19414487), (PMID:19423712) MGI PMID:19414487 PMID:19423712 NCBI chr 3:58,751,449...58,792,633
Ensembl chr 3:58,751,449...58,792,761 		JBrowse link
G Clrn2 clarin 2 involved_in IMP (PMID:33496845) UniProt PMID:33496845 NCBI chr 5:45,611,021...45,621,824
Ensembl chr 5:45,611,093...45,621,491 		JBrowse link
G Grxcr2 glutaredoxin, cysteine rich 2 acts_upstream_of_or_within IMP
IGI		 (PMID:30380417) MGI PMID:30380417 NCBI chr18:42,118,388...42,132,114
Ensembl chr18:42,118,388...42,132,114 		JBrowse link
G Lhfpl5 lipoma HMGIC fusion partner-like 5 acts_upstream_of_or_within IMP (PMID:15905332)
(PMID:17876667), (PMID:23217710)		 MGI PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr17:28,794,330...28,802,567
Ensembl chr17:28,794,615...28,804,653 		JBrowse link
G Myo3a myosin IIIA involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:22,232,360...22,508,693
Ensembl chr 2:22,232,316...22,508,264 		JBrowse link
G Myo3b myosin IIIB involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within IMP (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 MGI PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within IMP (PMID:24920589) MGI PMID:24920589 NCBI chr11:115,054,138...115,072,009
Ensembl chr11:115,054,167...115,072,007 		JBrowse link
G Pcdh15 protocadherin 15 acts_upstream_of_or_within IGI
IMP		 (PMID:15537665)
(PMID:10978835)
(PMID:23217710)
(PMID:11124469)
(PMID:16887306)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569 		JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:24334608) GO_Central
MGI		 PMID:24334608 GO_REF:0000033 NCBI chr19:45,015,346...45,048,273
Ensembl chr19:45,015,345...45,034,156 		JBrowse link
G Pls1 plastin 1 (I-isoform) involved_in IMP (PMID:25124451) UniProt PMID:25124451 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364 		JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP (PMID:29961578) UniProt PMID:29961578 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IMP (PMID:27269051) UniProt PMID:27269051 NCBI chr13:24,685,513...24,917,789
Ensembl chr13:24,685,508...24,917,799 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Sod1 superoxide dismutase 1, soluble acts_upstream_of_or_within IMP (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in		 IMP
IGI		 (PMID:18849963)
(PMID:21165971)
(PMID:30801007)		 MGI
UniProt		 PMID:18849963 PMID:21165971 PMID:30801007 NCBI chr 2:121,193,729...121,211,851
Ensembl chr 2:121,194,209...121,217,649 		JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within IGI (PMID:30801007) MGI PMID:30801007 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:30380417) GO_Central
MGI		 PMID:30380417 GO_REF:0000033 NCBI chr 2:25,152,610...25,159,898
Ensembl chr 2:25,152,630...25,159,897 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within IMP (PMID:20510926) MGI PMID:20510926 NCBI chr15:78,831,924...78,890,069
Ensembl chr15:78,831,924...78,890,069 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:27117407) GO_Central
MGI		 PMID:27117407 GO_REF:0000033 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28636
    developmental process 7494
      anatomical structure development 6964
        inner ear development 260
          inner ear receptor cell differentiation 95
            inner ear auditory receptor cell differentiation 66
              auditory receptor cell development 38
                auditory receptor cell morphogenesis + 30
Path 2
Term Annotations click to browse term
  biological_process 28636
    developmental process 7494
      anatomical structure development 6964
        multicellular organism development 5540
          system development 4764
            nervous system development 2923
              neurogenesis 2149
                generation of neurons 1841
                  neuron differentiation 1761
                    mechanoreceptor differentiation 103
                      inner ear receptor cell differentiation 95
                        inner ear receptor cell development 71
                          auditory receptor cell development 38
                            auditory receptor cell morphogenesis + 30
paths to the root