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ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell development
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Accession:GO:0060117 term browser browse the term
Definition:The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
Synonyms:exact_synonym: auditory hair cell development


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auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG10B ALG10 alpha-1,2-glucosyltransferase B acts_upstream_of_or_within ISO (PMID:24303013) MGI PMID:24303013 NCBI chr12:38,316,687...38,329,721
Ensembl chr12:38,316,762...38,329,721 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487) Ensembl
MGI		 PMID:19414487 GO_REF:0000107 NCBI chr 3:150,926,163...150,972,999
Ensembl chr 3:150,926,163...150,972,727 		JBrowse link
G ELMOD3 ELMO domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31628468) MGI
Ensembl		 PMID:31628468 GO_REF:0000107 NCBI chr 2:85,354,769...85,391,748
Ensembl chr 2:85,354,394...85,391,752 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,445,008...2,849,105
Ensembl chr11:2,444,654...2,849,105 		JBrowse link
G LRTOMT leucine rich transmembrane and O-methyltransferase domain containing involved_in ISS (PMID:18794526) UniProt PMID:18794526 NCBI chr11:72,080,850...72,110,782
Ensembl chr11:72,080,331...72,110,782 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,593,183...2,685,615
Ensembl chr17:2,593,183...2,685,615 		JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in		 ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,007,679...101,031,129
Ensembl chr10:101,007,679...101,032,295 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:12808454) GO_Central
MGI		 PMID:12808454 GO_REF:0000033 NCBI chr 3:27,372,723...27,484,384
Ensembl chr 3:27,372,723...27,484,420 		JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22105175) Ensembl
MGI		 PMID:22105175 GO_REF:0000107 NCBI chr 9:72,521,608...72,838,297
Ensembl chr 9:72,521,608...72,838,297 		JBrowse link
G TOMT transmembrane O-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,105,924...72,109,596
Ensembl chr11:72,105,924...72,109,596 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA 96 acts_upstream_of_or_within ISO (PMID:19363478) MGI PMID:19363478 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19936227) Ensembl
MGI		 PMID:19936227 GO_REF:0000107 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:17,493,900...17,544,416
Ensembl chr11:17,493,895...17,544,416 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr 2:63,119,559...63,840,826
Ensembl chr 2:63,119,559...63,827,843 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,182,689...4,224,814
Ensembl chr19:4,182,689...4,224,814 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007 		JBrowse link
G CDH23 cadherin related 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12121736)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:15537665)
(PMID:11322776)		 Ensembl
MGI		 PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 NCBI chr10:71,396,920...71,815,947
Ensembl chr10:71,396,920...71,815,947 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr 6:45,880,827...46,129,819
Ensembl chr 6:45,880,827...46,080,348 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr 3:150,926,163...150,972,999
Ensembl chr 3:150,926,163...150,972,727 		JBrowse link
G CLRN2 clarin 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:17,515,165...17,527,104
Ensembl chr 4:17,515,165...17,527,104 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 5:145,857,670...145,931,673
Ensembl chr 5:145,858,521...145,937,126 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17876667), (PMID:23217710)
(PMID:15905332)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr 6:35,805,352...35,824,070
Ensembl chr 6:35,797,206...35,845,397 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr10:25,934,229...26,212,532
Ensembl chr10:25,934,229...26,212,532 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr 2:170,178,147...170,655,167
Ensembl chr 2:170,178,145...170,655,171 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11753415)
(PMID:12121736)
(PMID:17050716)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr11:77,128,246...77,215,241
Ensembl chr11:77,128,246...77,215,241 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr17:74,748,628...74,769,353
Ensembl chr17:74,748,628...74,769,353 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:11124469)
(PMID:10978835)
(PMID:15537665)
(PMID:23217710)
(PMID:16887306)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr10:53,802,771...55,627,942
Ensembl chr10:53,802,771...55,627,942 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:101,007,679...101,031,129
Ensembl chr10:101,007,679...101,032,295 		JBrowse link
G PLS1 plastin 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:142,596,393...142,713,664
Ensembl chr 3:142,596,393...142,713,664 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,804,284...25,042,168
Ensembl chr 6:24,804,282...25,042,170 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896 		JBrowse link
G SOD1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:10464373), (PMID:10466888) Ensembl
MGI
UniProt		 PMID:10464373 PMID:10466888 GO_REF:0000024 GO_REF:0000107 NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931 		JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:30801007)
(PMID:18849963)		 Ensembl
MGI
UniProt		 PMID:18849963 PMID:30801007 GO_REF:0000024 GO_REF:0000107 NCBI chr15:43,599,563...43,618,800
Ensembl chr15:43,599,563...43,618,800 		JBrowse link
G TECTA tectorin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007) Ensembl
MGI		 PMID:30801007 GO_REF:0000107 NCBI chr11:121,101,243...121,191,490
Ensembl chr11:121,101,243...121,191,490 		JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:30380417) Ensembl
MGI
GO_Central		 PMID:30380417 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:137,191,619...137,200,741
Ensembl chr 9:137,191,617...137,204,193 		JBrowse link
G TRIOBP TRIO and F-actin binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20510926) Ensembl
MGI		 PMID:20510926 GO_REF:0000107 NCBI chr22:37,697,048...37,776,556
Ensembl chr22:37,697,048...37,776,556 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:27117407) Ensembl
MGI
GO_Central		 PMID:27117407 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:114,402,080...114,505,473
Ensembl chr 9:114,402,078...114,505,473 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20486
    developmental process 7683
      anatomical structure development 7066
        inner ear development 260
          inner ear receptor cell differentiation 96
            inner ear auditory receptor cell differentiation 67
              auditory receptor cell development 39
                auditory receptor cell morphogenesis + 30
Path 2
Term Annotations click to browse term
  biological_process 20486
    developmental process 7683
      anatomical structure development 7066
        multicellular organism development 5678
          system development 4952
            nervous system development 3097
              neurogenesis 2166
                generation of neurons 1860
                  neuron differentiation 1780
                    mechanoreceptor differentiation 104
                      inner ear receptor cell differentiation 96
                        inner ear receptor cell development 72
                          auditory receptor cell development 39
                            auditory receptor cell morphogenesis + 30
paths to the root