Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell development
go back to main search page
Accession:GO:0060117 term browser browse the term
Definition:The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
Synonyms:exact_synonym: auditory hair cell development


show annotations for term's descendants           Sort by:
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487) Ensembl
MGI		 PMID:19414487 GO_REF:0000107 NCBI chr23:45,512,639...45,551,010
Ensembl chr23:45,513,416...45,551,178 		JBrowse link
G ELMOD3 ELMO domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31628468) MGI
Ensembl		 PMID:31628468 GO_REF:0000107 NCBI chr17:39,642,101...39,668,079
Ensembl chr17:39,643,676...39,665,726 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043 		JBrowse link
G LOC106560171 transmembrane O-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,975,547...25,981,097 JBrowse link
G LOC477647 ALG10 alpha-1,2-glucosyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24303013) Ensembl
MGI		 PMID:24303013 GO_REF:0000107 NCBI chr27:15,121,327...15,127,229 JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24334608) Ensembl
MGI		 PMID:24334608 GO_REF:0000107 NCBI chr28:13,693,032...13,711,654
Ensembl chr28:13,693,023...13,711,784 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:12808454) MGI
GO_Central		 PMID:12808454 GO_REF:0000033 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22105175) Ensembl
MGI		 PMID:22105175 GO_REF:0000107 NCBI chr 1:85,041,039...85,159,607
Ensembl chr 1:85,041,574...85,187,369 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:19363478) MGI PMID:19363478 NCBI chr14:7,068,754...7,068,842
Ensembl chr14:7,068,754...7,068,842 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:19936227) MGI PMID:19936227 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:40,055,786...40,100,685
Ensembl chr21:40,055,730...40,101,430 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr10:62,894,818...63,316,555
Ensembl chr10:62,877,527...63,316,345 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chr20:55,391,381...55,404,538
Ensembl chr20:55,391,652...55,404,544 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:15537665)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:11322776)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr 4:22,206,972...22,570,875
Ensembl chr 4:22,207,001...22,571,131 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr12:14,160,524...14,318,174
Ensembl chr12:14,144,390...14,318,582 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr23:45,512,639...45,551,010
Ensembl chr23:45,513,416...45,551,178 		JBrowse link
G CLRN2 clarin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:62,958,242...62,967,878
Ensembl chr 3:62,959,224...62,967,994 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 2:40,310,285...40,330,200
Ensembl chr 2:40,315,807...40,328,240 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17876667), (PMID:23217710)
(PMID:15905332)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr12:4,919,732...4,936,823
Ensembl chr12:4,902,832...4,936,413 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr 2:7,455,125...7,695,483
Ensembl chr 2:7,455,625...7,696,043 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr36:14,804,662...15,229,597
Ensembl chr36:14,803,514...15,209,820 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr 9:5,661,792...5,679,783
Ensembl chr 9:5,662,464...5,679,570 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:16887306)
(PMID:10978835)
(PMID:11124469)
(PMID:15537665)
(PMID:23217710)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr26:33,426,728...34,589,208
Ensembl chr26:33,719,839...34,588,017 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:24334608) Ensembl
GO_Central
MGI		 PMID:24334608 GO_REF:0000033 GO_REF:0000107 NCBI chr28:13,693,032...13,711,654
Ensembl chr28:13,693,023...13,711,784 		JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,243,631...38,347,195
Ensembl chr23:38,243,024...38,347,202 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (PMID:29961578) UniProt PMID:29961578 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,823,053...23,041,765
Ensembl chr35:22,824,106...23,041,743 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SOD1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr31:26,540,291...26,544,212
Ensembl chr31:26,486,274...26,662,815 		JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007)
(PMID:18849963)		 Ensembl
MGI		 PMID:18849963 PMID:30801007 GO_REF:0000107 NCBI chr30:10,444,726...10,459,058
Ensembl chr30:10,444,793...10,460,785 		JBrowse link
G TECTA tectorin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007) Ensembl
MGI		 PMID:30801007 GO_REF:0000107 NCBI chr 5:12,879,963...12,949,211
Ensembl chr 5:12,879,951...12,949,147 		JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:30380417) Ensembl
GO_Central
MGI		 PMID:30380417 GO_REF:0000033 GO_REF:0000107
G TRIOBP TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chr10:26,856,981...26,913,330
Ensembl chr10:26,857,678...26,911,083 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:27117407) Ensembl
GO_Central
MGI		 PMID:27117407 GO_REF:0000033 GO_REF:0000107 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22103
    developmental process 6888
      anatomical structure development 6450
        inner ear development 255
          inner ear receptor cell differentiation 96
            inner ear auditory receptor cell differentiation 67
              auditory receptor cell development 38
                auditory receptor cell morphogenesis + 30
Path 2
Term Annotations click to browse term
  biological_process 22103
    developmental process 6888
      anatomical structure development 6450
        multicellular organism development 5222
          system development 4545
            nervous system development 2844
              neurogenesis 2102
                generation of neurons 1799
                  neuron differentiation 1721
                    mechanoreceptor differentiation 103
                      inner ear receptor cell differentiation 96
                        inner ear receptor cell development 71
                          auditory receptor cell development 38
                            auditory receptor cell morphogenesis + 30
paths to the root