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ONTOLOGY REPORT - ANNOTATIONS

Term:auditory receptor cell development
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Accession:GO:0060117 term browser browse the term
Definition:The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
Synonyms:exact_synonym: auditory hair cell development


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auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG10B ALG10 alpha-1,2-glucosyltransferase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24303013) Ensembl
MGI		 PMID:24303013 GO_REF:0000107 NCBI chr12:50,384,038...50,391,416 JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487) Ensembl
MGI		 PMID:19414487 GO_REF:0000107 NCBI chr 3:147,954,124...148,000,895
Ensembl chr 3:155,526,011...155,573,684 		JBrowse link
G ELMOD3 ELMO domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31628468) MGI
Ensembl		 PMID:31628468 GO_REF:0000107 NCBI chr2A:85,407,326...85,444,298
Ensembl chr2A:86,958,957...86,994,897 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,469,750...2,874,467 JBrowse link
G LOC100967430 leucine-rich repeat-containing protein 51 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,160,599...67,189,746
Ensembl chr11:70,392,081...70,412,641 		JBrowse link
G LOC100971669 dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,142,613...52,178,585
Ensembl chr12:54,776,822...54,781,149 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24334608) Ensembl
MGI		 PMID:24334608 GO_REF:0000107 NCBI chr10:97,608,969...97,632,508
Ensembl chr10:101,085,370...101,107,034 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12808454) MGI
TreeGrafter		 PMID:12808454 GO_REF:0000118 NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815 		JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22105175) Ensembl
MGI		 PMID:22105175 GO_REF:0000107 NCBI chr 9:51,974,326...52,200,228
Ensembl chr 9:71,400,783...71,620,858 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19936227) Ensembl
MGI		 PMID:19936227 GO_REF:0000107 NCBI chr13:66,990,025...67,003,900
Ensembl chr13:86,161,905...86,164,430 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:17,548,501...17,598,923
Ensembl chr11:17,233,854...17,284,256 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr2A:63,180,279...63,658,804
Ensembl chr2A:64,325,379...64,785,256 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chr19:3,206,152...3,246,886 JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr 6:45,474,797...45,592,407
Ensembl chr 6:46,753,013...46,934,100 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr 3:147,954,124...148,000,895
Ensembl chr 3:155,526,011...155,573,684 		JBrowse link
G CLRN2 clarin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:11,933,869...11,948,049
Ensembl chr 4:17,228,544...17,240,743 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 5:141,309,249...141,322,523
Ensembl chr 5:147,324,358...147,337,633 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17876667), (PMID:23217710)
(PMID:15905332)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr 6:35,367,304...35,389,595
Ensembl chr 6:36,569,008...36,589,102 		JBrowse link
G LOC100980308 tubulin-specific chaperone cofactor E-like protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:115,867,514...116,038,193
Ensembl chr11:119,873,943...119,961,175
Ensembl chr11:119,873,943...119,961,175 		JBrowse link
G LOC100983880 cadherin-23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:15537665)
(PMID:11322776)		 Ensembl
MGI		 PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 NCBI chr10:67,866,979...68,286,008
Ensembl chr10:70,434,801...70,810,240 		JBrowse link
G LOC103785466 stereocilin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18849963)
(PMID:30801007)		 MGI
Ensembl		 PMID:18849963 PMID:30801007 GO_REF:0000107 NCBI chr15:22,660,952...22,706,416
Ensembl chr15:40,740,387...40,757,999 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr10:26,104,588...26,389,942
Ensembl chr10:26,469,742...26,754,989 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr2B:57,458,046...57,940,039
Ensembl chr2B:174,975,796...175,398,203 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr17:68,694,468...68,715,157
Ensembl chr17:74,250,406...74,271,234 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:15537665)
(PMID:23217710)
(PMID:16887306)
(PMID:10978835)
(PMID:11124469)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr10:50,452,290...52,236,538
Ensembl chr10:52,666,969...53,536,611 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24334608) Ensembl
TreeGrafter
MGI		 PMID:24334608 GO_REF:0000107 GO_REF:0000118 NCBI chr10:97,608,969...97,632,508
Ensembl chr10:101,085,370...101,107,034 		JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:139,629,825...139,747,080
Ensembl chr 3:147,289,205...147,338,600 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (PMID:29961578) UniProt PMID:29961578 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,642,239...24,768,074
Ensembl chr 6:24,973,412...25,204,745 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065 		JBrowse link
G SOD1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr21:18,029,831...18,037,526 JBrowse link
G STRC stereocilin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723
Ensembl chr15:40,769,539...40,795,723 		JBrowse link
G TPRN taperin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30380417) MGI
TreeGrafter		 PMID:30380417 GO_REF:0000118 NCBI chr 9:108,251,235...108,261,541 JBrowse link
G TRIOBP TRIO and F-actin binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20510926) Ensembl
MGI		 PMID:20510926 GO_REF:0000107 NCBI chr22:18,662,794...18,693,138
Ensembl chr22:36,451,860...36,522,391 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27117407) Ensembl
TreeGrafter
MGI		 PMID:27117407 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19447
    developmental process 6653
      anatomical structure development 6239
        inner ear development 256
          inner ear receptor cell differentiation 96
            inner ear auditory receptor cell differentiation 67
              auditory receptor cell development 39
                auditory receptor cell morphogenesis + 30
Path 2
Term Annotations click to browse term
  biological_process 19447
    developmental process 6653
      anatomical structure development 6239
        multicellular organism development 5011
          system development 4353
            nervous system development 2732
              neurogenesis 2024
                generation of neurons 1746
                  neuron differentiation 1662
                    mechanoreceptor differentiation 103
                      inner ear receptor cell differentiation 96
                        inner ear receptor cell development 72
                          auditory receptor cell development 39
                            auditory receptor cell morphogenesis + 30
paths to the root