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ONTOLOGY REPORT - ANNOTATIONS


Term:auditory receptor cell stereocilium organization
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Accession:GO:0060088 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
Synonyms:exact_synonym: auditory receptor cell stereocilium organisation
 related_synonym: auditory receptor cell stereocilium organization and biogenesis


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auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chrNW_004624828:5,410,032...5,441,824 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chrNW_004624731:4,836,109...5,190,990
Ensembl chrNW_004624731:5,029,421...5,190,996
JBrowse link
G Cdh23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:15537665)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:11322776)
(PMID:12121736)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chrNW_004624754:5,356,006...5,725,774
Ensembl chrNW_004624754:5,393,733...5,724,876
JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chrNW_004624754:14,335,173...14,433,721
Ensembl chrNW_004624754:14,370,425...14,434,269
JBrowse link
G Clrn1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19414487), (PMID:19423712) Ensembl
MGI
PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chrNW_004624730:28,373,111...28,412,282
Ensembl chrNW_004624730:28,373,120...28,412,282
JBrowse link
G Clrn2 clarin 2 involved_in ISO (PMID:33496845) UniProt PMID:33496845 NCBI chrNW_004624755:14,319,151...14,330,329
Ensembl chrNW_004624755:14,317,093...14,329,604
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 acts_upstream_of_or_within ISO (PMID:35235570) MGI PMID:35235570 NCBI chrNW_004624761:23,876,226...24,039,591
Ensembl chrNW_004624761:23,876,301...24,039,603
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30380417) Ensembl
MGI
PMID:30380417 GO_REF:0000107 NCBI chrNW_004624774:5,344,696...5,367,009
Ensembl chrNW_004624774:5,344,696...5,367,009
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO (PMID:17876667), (PMID:23217710)
(PMID:15905332)
MGI PMID:15905332 PMID:17876667 PMID:23217710 NCBI chrNW_004624754:21,744,784...21,763,161
Ensembl chrNW_004624754:21,749,312...21,762,896
JBrowse link
G Myo3a myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chrNW_004624796:2,774,153...2,983,853 JBrowse link
G Myo3b myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chrNW_004624787:7,723,491...7,915,619
Ensembl chrNW_004624787:7,685,741...8,130,810
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO (PMID:11753415)
(PMID:17050716)
(PMID:12121736)
MGI PMID:11753415 PMID:12121736 PMID:17050716 NCBI chrNW_004624863:205,468...283,840
Ensembl chrNW_004624863:205,478...283,839
JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within ISO (PMID:24920589) MGI PMID:24920589 NCBI chrNW_004624801:4,612,890...4,630,454
Ensembl chrNW_004624801:4,612,849...4,630,451
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:10978835)
(PMID:15537665)
(PMID:23217710)
(PMID:16887306)
(PMID:11124469)
MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chrNW_004624791:9,042,311...9,992,341
Ensembl chrNW_004624791:9,195,902...9,990,131
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24334608) MGI
TreeGrafter
PMID:24334608 GO_REF:0000118 NCBI chrNW_004624831:608,270...624,679
Ensembl chrNW_004624831:608,970...624,617
JBrowse link
G Pls1 plastin 1 involved_in ISO (PMID:25124451) UniProt PMID:25124451 NCBI chrNW_004624730:19,164,360...19,302,369
Ensembl chrNW_004624730:19,163,783...19,302,222
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:29961578) UniProt PMID:29961578 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:2,133,261...2,260,133
Ensembl chrNW_004624756:2,133,339...2,247,643
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958
JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in
ISO (PMID:18849963)
(PMID:21165971)
(PMID:30801007)
MGI
UniProt
PMID:18849963 PMID:21165971 PMID:30801007 NCBI chrNW_004624838:2,894,945...2,913,030
Ensembl chrNW_004624838:2,896,147...2,910,268
JBrowse link
G Tecta tectorin alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:30801007) Ensembl
MGI
PMID:30801007 GO_REF:0000107 NCBI chrNW_004624880:4,040,402...4,122,377
Ensembl chrNW_004624880:4,041,020...4,122,377
JBrowse link
G Tprn taperin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30380417) MGI
TreeGrafter
PMID:30380417 GO_REF:0000118 NCBI chrNW_004624760:750,833...758,329
Ensembl chrNW_004624760:750,871...758,433
JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chrNW_004624752:10,130,857...10,186,242 JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27117407) TreeGrafter
MGI
PMID:27117407 GO_REF:0000118 NCBI chrNW_004624760:20,700,632...20,788,628
Ensembl chrNW_004624760:20,700,593...20,788,628
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17660
    developmental process 6427
      anatomical structure morphogenesis 2793
        embryonic morphogenesis 674
          auditory receptor cell morphogenesis 30
            auditory receptor cell stereocilium organization 26
Path 2
Term Annotations click to browse term
  biological_process 17660
    developmental process 6427
      anatomical structure development 6010
        multicellular organism development 4841
          system development 4232
            nervous system development 2677
              neurogenesis 2002
                generation of neurons 1737
                  neuron differentiation 1655
                    mechanoreceptor differentiation 100
                      inner ear receptor cell differentiation 93
                        inner ear receptor cell development 69
                          auditory receptor cell development 37
                            auditory receptor cell morphogenesis 30
                              auditory receptor cell stereocilium organization 26
paths to the root