ONTOLOGY REPORT - ANNOTATIONS
Term: auditory receptor cell stereocilium organization
Accession: GO:0060088
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Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
Synonyms: exact_synonym: auditory receptor cell stereocilium organisation
related_synonym: auditory receptor cell stereocilium organization and biogenesis
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ANKRD24
ankyrin repeat domain 24
involved_in
ISS IEA
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr19:4,182,689...4,224,814
Ensembl chr19:4,182,689...4,224,814
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ATP2B2
ATPase plasma membrane Ca2+ transporting 2
acts_upstream_of_or_within
ISO
(PMID:11875276)
MGI
PMID:11875276
NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007
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CDH23
cadherin related 23
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:12121736) (PMID:7610888), (PMID:8790740), (PMID:9039475) (PMID:11138008), (PMID:17050716), (PMID:23217710) (PMID:15537665) (PMID:11322776)
Ensembl MGI
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 More...
GO_REF:0000107
NCBI chr10:71,396,920...71,815,947
Ensembl chr10:71,396,920...71,815,947
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CLIC5
chloride intracellular channel 5
acts_upstream_of_or_within
ISO
(PMID:17021174)
MGI
PMID:17021174
NCBI chr 6:45,880,827...46,129,819
Ensembl chr 6:45,880,827...46,080,348
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CLRN1
clarin 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:19414487), (PMID:19423712)
Ensembl MGI
PMID:19414487 PMID:19423712
GO_REF:0000107
NCBI chr 3:150,926,163...150,972,999
Ensembl chr 3:150,926,163...150,972,727
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CLRN2
clarin 2
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:17,515,165...17,527,104
Ensembl chr 4:17,515,165...17,527,104
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GRXCR2
glutaredoxin and cysteine rich domain containing 2
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:30380417)
Ensembl MGI
PMID:30380417
GO_REF:0000107
NCBI chr 5:145,857,670...145,931,673
Ensembl chr 5:145,858,521...145,937,126
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LHFPL5
LHFPL tetraspan subfamily member 5
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:17876667), (PMID:23217710) (PMID:15905332)
Ensembl MGI
PMID:15905332 PMID:17876667 PMID:23217710
GO_REF:0000107
NCBI chr 6:35,805,352...35,824,070
Ensembl chr 6:35,797,206...35,845,397
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MYO3A
myosin IIIA
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr10:25,934,229...26,212,532
Ensembl chr10:25,934,229...26,212,532
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MYO3B
myosin IIIB
involved_in
ISO
(PMID:26754646)
MGI
PMID:26754646
NCBI chr 2:170,178,147...170,655,167
Ensembl chr 2:170,178,145...170,655,171
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MYO7A
myosin VIIA
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:11753415) (PMID:12121736) (PMID:17050716)
Ensembl MGI
PMID:11753415 PMID:12121736 PMID:17050716
GO_REF:0000107
NCBI chr11:77,128,246...77,215,241
Ensembl chr11:77,128,246...77,215,241
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NHERF1
NHERF family PDZ scaffold protein 1
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:24920589)
Ensembl MGI
PMID:24920589
GO_REF:0000107
NCBI chr17:74,748,628...74,769,353
Ensembl chr17:74,748,628...74,769,353
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PCDH15
protocadherin related 15
acts_upstream_of_or_within
ISO
(PMID:11124469) (PMID:10978835) (PMID:15537665) (PMID:23217710) (PMID:16887306)
MGI
PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710
NCBI chr10:53,802,771...55,627,942
Ensembl chr10:53,802,771...55,627,942
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PDZD7
PDZ domain containing 7
involved_in acts_upstream_of_or_within
IEA IBA ISS
Ensembl GO_Central UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:101,007,679...101,031,129
Ensembl chr10:101,007,679...101,032,295
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PLS1
plastin 1
involved_in
IEA ISS
Ensembl UniProt
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:142,596,393...142,713,664
Ensembl chr 3:142,596,393...142,713,664
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REST
RE1 silencing transcription factor
involved_in
ISS
UniProt
GO_REF:0000024
NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808
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RIPOR2
RHO family interacting cell polarization regulator 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:24,804,284...25,042,168
Ensembl chr 6:24,804,282...25,042,170
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SCRIB
scribble planar cell polarity protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
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SEC24B
SEC24 homolog B, COPII coat complex component
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20215345)
Ensembl MGI
PMID:20215345
GO_REF:0000107
NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896
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SOD1
superoxide dismutase 1
involved_in acts_upstream_of_or_within
IEA ISO ISS
(PMID:10464373), (PMID:10466888)
Ensembl MGI UniProt
PMID:10464373 PMID:10466888
GO_REF:0000024 GO_REF:0000107
NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931
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STRC
stereocilin
involved_in acts_upstream_of_or_within
IEA ISO ISS
(PMID:30801007) (PMID:18849963)
Ensembl MGI UniProt
PMID:18849963 PMID:30801007
GO_REF:0000024 GO_REF:0000107
NCBI chr15:43,599,563...43,618,800
Ensembl chr15:43,599,563...43,618,800
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TECTA
tectorin alpha
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:30801007)
Ensembl MGI
PMID:30801007
GO_REF:0000107
NCBI chr11:121,101,243...121,191,490
Ensembl chr11:121,101,243...121,191,490
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TPRN
taperin
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:30380417)
Ensembl MGI GO_Central
PMID:30380417
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:137,191,619...137,200,741
Ensembl chr 9:137,191,617...137,204,193
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TRIOBP
TRIO and F-actin binding protein
involved_in acts_upstream_of_or_within
IEA ISO
(PMID:20510926)
Ensembl MGI
PMID:20510926
GO_REF:0000107
NCBI chr22:37,697,048...37,776,556
Ensembl chr22:37,697,048...37,776,556
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WHRN
whirlin
involved_in acts_upstream_of_or_within
IEA ISO IBA
(PMID:27117407)
Ensembl MGI GO_Central
PMID:27117407
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:114,402,080...114,505,473
Ensembl chr 9:114,402,078...114,505,473
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