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ONTOLOGY REPORT - ANNOTATIONS


Term:mammary gland involution
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Accession:GO:0060056 term browser browse the term
Definition:The tissue remodeling that removes differentiated mammary epithelia during weaning.



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mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IEP RGD PMID:20110414 RGD:4142798 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Bsx brain specific homeobox acts_upstream_of_or_within ISO MGI:3719242|MGI:3719245 (MGI:3718939|PMID:17485440) RGD PMID:17485440 MGI:3718939 NCBI chr 8:41,254,105...41,257,861
Ensembl chr 8:41,254,105...41,257,861
JBrowse link
G Capn1 calpain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5543358|PMID:22555453)
Ensembl
RGD
PMID:22555453 GO_REF:0000107 MGI:5543358 NCBI chr 1:203,275,912...203,300,848
Ensembl chr 1:203,277,344...203,300,177
JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:3703676|PMID:12388746)
Ensembl
RGD
PMID:12388746 GO_REF:0000107 MGI:3703676 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cp ceruloplasmin IEP RGD PMID:28089327 RGD:25671605 NCBI chr 2:102,439,433...102,498,075
Ensembl chr 2:102,439,624...102,498,075
JBrowse link
G Elf3 E74 like ETS transcription factor 3 involved_in ISO (MGI:3715065|PMID:9806763) RGD PMID:9806763 MGI:3715065 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:10653587 RGD:2290014 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEP RGD PMID:10653587 RGD:2290014 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 acts_upstream_of_or_within ISO MGI:3663363 (MGI:3713633|PMID:17255210) RGD PMID:17255210 MGI:3713633 NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IEP RGD PMID:9409757 RGD:4107723 NCBI chr17:45,278,867...45,330,806
Ensembl chr17:45,234,097...45,330,736
JBrowse link
G Stat5a signal transducer and activator of transcription 5A IDA RGD PMID:16227201 RGD:2291942 NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
JBrowse link
positive regulation of apoptotic process involved in mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO MGI:2178779 (MGI:3052392|PMID:15282149) RGD PMID:15282149 MGI:3052392 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857429 (MGI:1337911|PMID:10363969)
Ensembl
RGD
PMID:10363969 GO_REF:0000107 MGI:1337911 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A acts_upstream_of_or_within ISO MGI:1926877 (MGI:3047035|PMID:15105443) RGD PMID:15105443 MGI:3047035 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:11080164) RGD PMID:11080164 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Vdr vitamin D receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2183404 (MGI:3051725|PMID:15178742)
Ensembl
RGD
PMID:15178742 GO_REF:0000107 MGI:3051725 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    multicellular organismal process 8834
      tissue remodeling 223
        mammary gland involution 16
          apoptotic process involved in mammary gland involution + 5
          negative regulation of mammary gland involution 0
          positive regulation of mammary gland involution 0
          regulation of mammary gland involution + 0
Path 2
Term Annotations click to browse term
  biological_process 19504
    developmental process 6778
      anatomical structure development 6203
        multicellular organism development 5642
          system development 5310
            animal organ development 4069
              gland development 665
                mammary gland development 206
                  mammary gland morphogenesis 67
                    mammary gland involution 16
                      apoptotic process involved in mammary gland involution + 5
                      negative regulation of mammary gland involution 0
                      positive regulation of mammary gland involution 0
                      regulation of mammary gland involution + 0
paths to the root