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ONTOLOGY REPORT - ANNOTATIONS


Term:pharyngeal system development
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Accession:GO:0060037 term browser browse the term
Definition:The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear.


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pharyngeal system development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor, type 1 JBrowse link 2 58,446,438 58,566,828 RGD:2290270
G Bmp5 bone morphogenetic protein 5 JBrowse link 9 75,775,365 75,900,316 RGD:2290270
G Bmp7 bone morphogenetic protein 7 JBrowse link 2 172,868,012 172,940,321 RGD:2290270
G Ece1 endothelin converting enzyme 1 JBrowse link 4 137,862,237 137,965,229 RGD:2290270
G Eya1 EYA transcriptional coactivator and phosphatase 1 JBrowse link 1 14,168,953 14,311,035 RGD:2290270
G Fgf8 fibroblast growth factor 8 JBrowse link 19 45,736,798 45,742,941 RGD:2290270
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
G Isl1 ISL1 transcription factor, LIM/homeodomain JBrowse link 13 116,298,270 116,309,688 RGD:2290270
G Nkx2-5 NK2 homeobox 5 JBrowse link 17 26,838,664 26,844,988 RGD:2290270
G Nkx2-6 NK2 homeobox 6 JBrowse link 14 69,171,802 69,175,540 RGD:2290270
G Nkx3-1 NK3 homeobox 1 JBrowse link 14 69,190,692 69,194,658 RGD:2290270
G Plxna2 plexin A2 JBrowse link 1 194,619,791 194,816,869 RGD:2290270
G Ptch1 patched 1 JBrowse link 13 63,508,328 63,573,460 RGD:2290270
G Ripply3 ripply transcriptional repressor 3 JBrowse link 16 94,328,422 94,336,935 RGD:2290270
G Six1 sine oculis-related homeobox 1 JBrowse link 12 73,041,827 73,046,712 RGD:2290270
G Six4 sine oculis-related homeobox 4 JBrowse link 12 73,099,609 73,114,031 RGD:2290270
G Tbx1 T-box 1 JBrowse link 16 18,581,704 18,590,671 RGD:2290270
G Tgfbr1 transforming growth factor, beta receptor I JBrowse link 4 47,353,222 47,414,926 RGD:2290270
pharyngeal arch artery morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrf4 adhesion G protein-coupled receptor F4 JBrowse link 17 42,656,208 42,697,569 RGD:2290270
G Adgrf5 adhesion G protein-coupled receptor F5 JBrowse link 17 43,360,329 43,459,557 RGD:2290270
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:2290270
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,061 34,503,336 RGD:2290270
G Bmpr2 bone morphogenetic protein receptor, type II (serine/threonine kinase) JBrowse link 1 59,764,279 59,878,081 RGD:2290270
G Folr1 folate receptor 1 (adult) JBrowse link 7 101,858,331 101,870,788 RGD:2290270
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Nog noggin JBrowse link 11 89,300,638 89,302,559 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Tgfb2 transforming growth factor, beta 2 JBrowse link 1 186,622,787 186,709,697 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23015
    multicellular organismal process 8218
      multicellular organism development 5339
        system development 4730
          pharyngeal system development 28
            pharyngeal arch artery morphogenesis 10
Path 2
Term Annotations click to browse term
  biological_process 23015
    developmental process 6306
      anatomical structure development 5847
        multicellular organism development 5339
          embryo development 1233
            embryo development ending in birth or egg hatching 838
              chordate embryonic development 821
                pharyngeal system development 28
                  pharyngeal arch artery morphogenesis 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.