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ONTOLOGY REPORT - ANNOTATIONS

Term:convergent extension
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Accession:GO:0060026 term browser browse the term
Definition:The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis.
Synonyms:xref: Wikipedia:Convergent_extension


show annotations for term's descendants           Sort by:
convergent extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G NKD1 NKD inhibitor of WNT signaling pathway 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,811,342...30,912,346 JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chr 6:42,668,077...42,753,547
Ensembl chr 6:43,962,560...44,051,146 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286) Ensembl
MGI		 PMID:17433286 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,440,626...68,441,935
Ensembl chr15:87,645,768...87,647,210 		JBrowse link
convergent extension involved in axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258 		JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr10:94,383,269...94,389,053
Ensembl chr10:97,877,790...97,882,850 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22110054) Ensembl
MGI		 PMID:22110054 GO_REF:0000107 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:17229766) MGI PMID:17229766 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
convergent extension involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chr 3:129,753,399...129,795,300 JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627), (PMID:17229766) MGI PMID:16571627 PMID:17229766 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281 		JBrowse link
convergent extension involved in organogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16116426) Ensembl
MGI		 PMID:16116426 GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16116426) Ensembl
MGI		 PMID:16116426 GO_REF:0000107 NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571 		JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286) Ensembl
MGI		 PMID:17433286 GO_REF:0000107 NCBI chr2B:70,106,378...70,139,333
Ensembl chr2B:187,915,579...187,948,855 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:17433286) MGI PMID:17433286 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286)
(PMID:19795512)		 Ensembl
MGI		 PMID:17433286 PMID:19795512 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr 8:40,507,027...40,555,053 JBrowse link
planar cell polarity pathway involved in gastrula mediolateral intercalation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    developmental process 6563
      anatomical structure morphogenesis 2851
        tissue morphogenesis 701
          morphogenesis of an epithelium 590
            convergent extension 15
              convergent extension involved in axis elongation + 7
              convergent extension involved in gastrulation + 7
              convergent extension involved in organogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 16440
    developmental process 6563
      anatomical structure development 6172
        anatomical structure morphogenesis 2851
          tissue morphogenesis 701
            morphogenesis of an epithelium 590
              convergent extension 15
                convergent extension involved in axis elongation + 7
                convergent extension involved in gastrulation + 7
                convergent extension involved in organogenesis + 6
paths to the root