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ONTOLOGY REPORT - ANNOTATIONS


Term:convergent extension
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Accession:GO:0060026 term browser browse the term
Definition:The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis.
Synonyms:xref: Wikipedia:Convergent_extension



show annotations for term's descendants           Sort by:
convergent extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (PMID:19795512) RGD PMID:19795512 NCBI chr 4:167,269,856...167,400,364 JBrowse link
G Nkd1 NKD inhibitor of WNT signaling pathway 1 involved_in ISO (PMID:11274398) RGD PMID:11274398 NCBI chr19:34,649,803...34,722,846 JBrowse link
G Nphp3 nephrocystin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:113,500,708...113,541,179 JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3640803 (PMID:20704721) RGD PMID:20704721 NCBI chr 9:21,849,756...21,916,077 JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (PMID:17433286) RGD PMID:17433286 NCBI chr16:3,702,300...3,724,860 JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (PMID:10393122) RGD PMID:10393122 NCBI chr 1:143,147,671...143,149,189 JBrowse link
convergent extension involved in axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:108078|MGI:1860298 (PMID:18257070) RGD PMID:18257070 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Sfrp5 secreted frizzled-related protein 5 acts_upstream_of_or_within ISO MGI:108078|MGI:892014 (PMID:18257070) RGD PMID:18257070 NCBI chr 1:241,006,762...241,011,224 JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (PMID:22110054) RGD PMID:22110054 NCBI chr 1:82,724,842...82,731,566 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (PMID:17229766) RGD PMID:17229766 NCBI chr13:84,462,731...84,489,404 JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:98958 (PMID:25813538) RGD PMID:25813538 NCBI chr 1:162,545,660...162,565,456 JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101948|MGI:1857617 (PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860 JBrowse link
G Zfp568 zinc finger protein 568 acts_upstream_of_or_within ISO MGI:3578538 (PMID:18701545) RGD PMID:18701545 NCBI chr 1:85,206,643...85,257,759 JBrowse link
convergent extension involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO UniProtKB:Q6AZT7 (PMID:18371931) RGD PMID:18371931 NCBI chr 8:113,500,708...113,541,179 JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (PMID:16571627) RGD PMID:16571627 NCBI chr 5:171,738,911...171,750,967 JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:2135272|MGI:2429760|MGI:94941 (PMID:16571627) RGD PMID:16571627 NCBI chr10:54,723,356...54,732,823 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:106613|MGI:1857642 (PMID:16571627), (PMID:17229766) RGD PMID:16571627 PMID:17229766 NCBI chr13:84,462,731...84,489,404 JBrowse link
G Zfp568 zinc finger protein 568 acts_upstream_of_or_within ISO MGI:3578538 (PMID:18701545) RGD PMID:18701545 NCBI chr 1:85,206,643...85,257,759 JBrowse link
convergent extension involved in organogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613|MGI:2137230 (PMID:16116426) RGD PMID:16116426 NCBI chr 5:171,738,911...171,750,967 JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:94941 (PMID:16116426) RGD PMID:16116426 NCBI chr10:54,723,356...54,732,823 JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within ISO MGI:98958 (PMID:17433286) RGD PMID:17433286 NCBI chr 3:65,332,274...65,365,208 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:98958 (PMID:17433286) RGD PMID:17433286 NCBI chr13:84,462,731...84,489,404 JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1298218|MGI:2135272 (PMID:17433286), (PMID:19795512)
Ensembl
RGD
PMID:17433286 PMID:19795512 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860 JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108078|MGI:1860298 (PMID:18257070)
Ensembl
RGD
PMID:18257070 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure morphogenesis 3006
        tissue morphogenesis 717
          morphogenesis of an epithelium 592
            convergent extension 16
              convergent extension involved in axis elongation + 8
              convergent extension involved in gastrulation + 6
              convergent extension involved in organogenesis + 7
Path 2
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        anatomical structure morphogenesis 3006
          tissue morphogenesis 717
            morphogenesis of an epithelium 592
              convergent extension 16
                convergent extension involved in axis elongation + 8
                convergent extension involved in gastrulation + 6
                convergent extension involved in organogenesis + 7
paths to the root