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ONTOLOGY REPORT - ANNOTATIONS

Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development

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roof of mouth development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:16845371) MGI PMID:16845371 NCBI chrNW_004624731:2,557,993...2,600,250
Ensembl chrNW_004624731:2,566,063...2,600,035 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO (PMID:9847249) MGI PMID:9847249 NCBI chrNW_004624767:3,770,755...3,808,511
Ensembl chrNW_004624767:3,770,762...3,805,323 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) MGI PMID:33996804 NCBI chrNW_004624746:378,123...576,809
Ensembl chrNW_004624746:461,933...577,050 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within ISO (PMID:21636789) MGI PMID:21636789 NCBI chrNW_004624825:2,814,758...2,844,008 JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624791:1,610,169...1,785,512
Ensembl chrNW_004624791:1,610,169...1,785,477 		JBrowse link
G Asph aspartate beta-hydroxylase acts_upstream_of_or_within ISO (PMID:11773073) MGI PMID:11773073 NCBI chrNW_004624744:30,190,625...30,420,501
Ensembl chrNW_004624744:30,190,513...30,418,467 		JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) MGI PMID:31600785 NCBI chrNW_004624776:6,823,388...6,954,114
Ensembl chrNW_004624776:6,825,204...6,922,791 		JBrowse link
G Bcor BCL6 corepressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:15,338,331...15,465,683
Ensembl chrNW_004624762:15,420,596...15,465,873 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:15716346) MGI PMID:15716346 NCBI chrNW_004624841:218,642...304,744
Ensembl chrNW_004624841:219,133...265,397 		JBrowse link
G Bnc2 basonuclin zinc finger protein 2 acts_upstream_of_or_within ISO (PMID:19706529) MGI PMID:19706529 NCBI chrNW_004624736:20,488,854...20,917,614
Ensembl chrNW_004624736:20,491,388...20,916,729 		JBrowse link
G Cdk20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chrNW_004624868:4,225,779...4,248,252
Ensembl chrNW_004624868:4,241,976...4,248,196 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO (PMID:16207732) MGI PMID:16207732 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:12673280) UniProt PMID:12673280 NCBI chrNW_004624754:23,614,486...23,640,489
Ensembl chrNW_004624754:23,614,570...23,639,591 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO (PMID:7276808) MGI PMID:7276808 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (PMID:25877302) MGI PMID:25877302 NCBI chrNW_004624759:17,763,200...17,879,603
Ensembl chrNW_004624759:17,763,585...17,855,954 		JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624731:1,829,158...1,841,216
Ensembl chrNW_004624731:1,829,105...1,841,216 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO (PMID:24005908) MGI PMID:24005908 NCBI chrNW_004624818:557,399...590,872
Ensembl chrNW_004624818:557,409...590,872 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chrNW_004624813:3,746,040...3,751,542
Ensembl chrNW_004624813:3,746,046...3,752,905 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:8947026) UniProt PMID:8947026 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (PMID:8947026) UniProt PMID:8947026 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within
involved_in 		ISO (PMID:22304410)
(PMID:21177256) 		MGI
UniProt		 PMID:21177256 PMID:22304410 NCBI chrNW_004624825:2,979,447...2,981,412
Ensembl chrNW_004624825:2,980,176...2,981,303 		JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (PMID:19276632) UniProt PMID:19276632 NCBI chrNW_004624756:23,209,402...23,213,817
Ensembl chrNW_004624756:23,209,390...23,213,802 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO (PMID:23469164) MGI PMID:23469164 NCBI chrNW_004624757:12,529,475...12,973,751
Ensembl chrNW_004624757:12,532,466...12,972,918 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:27158779) MGI PMID:27158779 NCBI chrNW_004624832:4,509,118...4,514,180
Ensembl chrNW_004624832:4,509,505...4,514,183 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in ISO (PMID:9108119) UniProt PMID:9108119 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chrNW_004624809:10,414,935...10,417,838
Ensembl chrNW_004624809:10,415,592...10,416,596 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO (PMID:24019467) MGI PMID:24019467 NCBI chrNW_004624802:12,259,971...12,269,440 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:18816854) MGI PMID:18816854 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:17531968), (PMID:19341725) MGI PMID:17531968 PMID:19341725 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:21653639) MGI PMID:21653639 NCBI chrNW_004624738:9,510,452...9,546,985
Ensembl chrNW_004624738:9,510,512...9,545,933 		JBrowse link
G Inhba inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:19,458,835...19,482,570
Ensembl chrNW_004624740:19,464,289...19,482,888 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181 		JBrowse link
G Intu inturned planar cell polarity protein involved_in ISO (PMID:27158779) GO_Central PMID:27158779 NCBI chrNW_004624777:8,585,777...8,674,887
Ensembl chrNW_004624777:8,596,178...8,675,295 		JBrowse link
G Irf6 interferon regulatory factor 6 acts_upstream_of_or_within ISO (PMID:21515572) MGI PMID:21515572 NCBI chrNW_004624807:2,190,721...2,207,183
Ensembl chrNW_004624807:2,193,798...2,206,768 		JBrowse link
G LOC101723938 ALX homeobox protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624837:4,222,679...4,473,532
Ensembl chrNW_004624837:4,234,677...4,414,783
Ensembl chrNW_004624837:4,234,677...4,414,783 		JBrowse link
G Loxl3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:28,959,682...28,980,428
Ensembl chrNW_004624749:28,960,593...28,980,428 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19700620)
(PMID:19653321) 		MGI PMID:19653321 PMID:19700620 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO (PMID:17927973) MGI PMID:17927973 NCBI chrNW_004624767:21,579,084...21,585,380
Ensembl chrNW_004624767:21,579,103...21,585,373 		JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO (PMID:16284941) MGI PMID:16284941 NCBI chrNW_004624739:14,483,750...14,547,491
Ensembl chrNW_004624739:14,483,789...14,547,374 		JBrowse link
G Msc musculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:19,268,734...19,272,611
Ensembl chrNW_004624744:19,269,944...19,273,768 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:16330189)
(PMID:7914451) 		MGI
UniProt		 PMID:7914451 PMID:16330189 NCBI chrNW_004624755:21,857,360...21,861,235
Ensembl chrNW_004624755:21,857,461...21,861,337 		JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624913:968,093...1,013,990
Ensembl chrNW_004624913:968,093...1,014,035 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:19389375) UniProt PMID:19389375 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:6,035,923...6,043,682
Ensembl chrNW_004624763:6,035,953...6,043,437 		JBrowse link
G Pak1ip1 PAK1 interacting protein 1 acts_upstream_of_or_within ISO (PMID:23935987) MGI PMID:23935987 NCBI chrNW_004624756:15,194,191...15,205,163
Ensembl chrNW_004624756:15,192,462...15,204,872 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chrNW_004624761:27,029,420...27,186,537
Ensembl chrNW_004624761:27,030,615...27,175,960 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (PMID:19097194), (PMID:19465597) UniProt PMID:19097194 PMID:19465597 NCBI chrNW_004624738:23,759,382...23,768,743
Ensembl chrNW_004624738:23,759,398...23,771,639 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624737:24,299,199...24,365,459 JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:20007998) MGI PMID:20007998 NCBI chrNW_004624818:6,978,436...7,258,366
Ensembl chrNW_004624818:6,978,436...7,258,357 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO (PMID:7758948) MGI PMID:7758948 NCBI chrNW_004624826:8,361,039...8,435,488
Ensembl chrNW_004624826:8,361,033...8,435,656 		JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:2,521,230...2,525,449
Ensembl chrNW_004624885:2,521,368...2,525,449 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO (PMID:16751105)
(PMID:16960803) 		MGI PMID:16751105 PMID:16960803 NCBI chrNW_004624889:1,321,323...1,466,368
Ensembl chrNW_004624889:1,321,345...1,466,319 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624754:4,844,472...4,889,006
Ensembl chrNW_004624754:4,844,552...4,886,709 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:19304890) MGI PMID:19304890 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chrNW_004624818:7,674,184...7,736,249
Ensembl chrNW_004624818:7,673,203...7,736,255 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:17376812) MGI PMID:17376812 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266 		JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:17376812) MGI PMID:17376812 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:9030684) MGI PMID:9030684 NCBI chrNW_004624738:20,466,120...20,591,966
Ensembl chrNW_004624738:20,466,117...20,591,910 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISO (PMID:16990542) UniProt PMID:16990542 NCBI chrNW_004624765:14,205,071...14,229,864
Ensembl chrNW_004624765:14,205,051...14,229,864 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chrNW_004624798:9,444,536...9,609,957
Ensembl chrNW_004624798:9,444,919...9,609,134 		JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:19769959) MGI PMID:19769959 NCBI chrNW_004624871:2,428,757...2,437,447
Ensembl chrNW_004624871:2,429,407...2,437,447 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:19769959) MGI PMID:19769959 NCBI chrNW_004624747:18,128,003...18,142,366
Ensembl chrNW_004624747:18,128,028...18,142,451 		JBrowse link
G Tcf21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:21204207) UniProt PMID:21204207 NCBI chrNW_004624756:15,413,950...15,436,037
Ensembl chrNW_004624756:15,418,260...15,436,379 		JBrowse link
G Tgfb3 transforming growth factor beta 3 acts_upstream_of_or_within ISO (PMID:16245336) MGI PMID:16245336 NCBI chrNW_004624734:25,717,011...25,739,942
Ensembl chrNW_004624734:25,716,972...25,739,199 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 acts_upstream_of_or_within ISO (PMID:16806156)
(PMID:16845371) 		MGI PMID:16806156 PMID:16845371 NCBI chrNW_004624825:1,773,158...1,899,120
Ensembl chrNW_004624825:1,839,178...1,899,156 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:20101701) BHF-UCL PMID:20101701 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) MGI PMID:25382630 NCBI chrNW_004624742:5,871,155...6,080,773 JBrowse link
G Tiparp TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624730:34,262,630...34,293,034
Ensembl chrNW_004624730:34,262,468...34,293,087 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO (PMID:28954202) MGI PMID:28954202 NCBI chrNW_004624786:10,742,842...10,745,381
Ensembl chrNW_004624786:10,741,929...10,745,359 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO RGD PMID:11330859 RGD:5131603 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809 		JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (PMID:10601035) MGI PMID:10601035 NCBI chrNW_004624737:29,489,601...29,496,548
Ensembl chrNW_004624737:29,490,936...29,496,483 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within 		ISO (PMID:27158779)
(PMID:24302887) 		GO_Central
MGI		 PMID:24302887 PMID:27158779 NCBI chrNW_004624762:9,901,021...10,303,217
Ensembl chrNW_004624762:9,970,904...10,303,046 		JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 acts_upstream_of_or_within ISO (PMID:24019467) MGI PMID:24019467 NCBI chrNW_004624913:1,442,351...1,446,249
Ensembl chrNW_004624913:1,443,399...1,448,669 		JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within ISO (PMID:24019467) MGI PMID:24019467 NCBI chrNW_004624795:6,669,114...6,675,254
Ensembl chrNW_004624795:6,669,926...6,675,318 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO (PMID:18191119) MGI PMID:18191119 NCBI chrNW_004624817:931,686...952,474
Ensembl chrNW_004624817:932,970...952,326 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chrNW_004624849:2,971,658...2,979,864
Ensembl chrNW_004624849:2,957,153...2,976,179 		JBrowse link
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 acts_upstream_of_or_within ISO (PMID:16607638) MGI PMID:16607638 NCBI chrNW_004624734:308,371...327,496
Ensembl chrNW_004624734:308,375...327,604 		JBrowse link
hard palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (PMID:11238884)
(PMID:17435047) 		MGI PMID:11238884 PMID:17435047 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319 		JBrowse link
G Foxe1 forkhead box E1 involved_in ISO (PMID:12165566) UniProt PMID:12165566 NCBI chrNW_004624825:2,979,447...2,981,412
Ensembl chrNW_004624825:2,980,176...2,981,303 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within ISO (PMID:20940229) MGI PMID:20940229 NCBI chrNW_004624809:2,021,118...2,025,826
Ensembl chrNW_004624809:2,021,124...2,025,589 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO (PMID:20940229) MGI PMID:20940229 NCBI chrNW_004624795:577,350...584,110
Ensembl chrNW_004624795:578,571...580,235 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:7581464), (PMID:8146195), (PMID:8389469)
(PMID:12606284), (PMID:7581464) 		MGI PMID:7581464 PMID:8146195 PMID:8389469 PMID:12606284 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625 		JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (PMID:19118215) MGI PMID:19118215 NCBI chrNW_004624732:5,348,589...5,499,826
Ensembl chrNW_004624732:5,403,956...5,499,855 		JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO (PMID:19118215) MGI PMID:19118215 NCBI chrNW_004624739:10,164,645...10,261,732
Ensembl chrNW_004624739:10,168,495...10,259,804 		JBrowse link
G Mmp25 matrix metallopeptidase 25 acts_upstream_of_or_within ISO (PMID:20809987) MGI PMID:20809987 NCBI chrNW_004624824:787,159...803,765
Ensembl chrNW_004624824:791,236...804,591 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:15254231) UniProt PMID:15254231 NCBI chrNW_004624846:4,043,010...4,046,660
Ensembl chrNW_004624846:4,044,893...4,046,248 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:30121012) MGI PMID:30121012 NCBI chrNW_004624747:386,763...395,515
Ensembl chrNW_004624747:388,904...395,098 		JBrowse link
primary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624777:2,105,122...2,151,399
Ensembl chrNW_004624777:2,104,765...2,151,402 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:17531968) MGI PMID:17531968 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099) MGI PMID:22228099 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
secondary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:15300250) BHF-UCL PMID:15300250 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:14691138) BHF-UCL PMID:14691138 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389 		JBrowse link
G Lrrc32 leucine rich repeat containing 32 involved_in ISO (PMID:28912269) UniProt PMID:28912269 NCBI chrNW_004624817:497,415...510,061
Ensembl chrNW_004624817:497,372...510,580 		JBrowse link
G Smad2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:11,380,656...11,460,566
Ensembl chrNW_004624778:11,384,769...11,501,078 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:2,363,059...2,436,536
Ensembl chrNW_004624835:2,363,139...2,437,643 		JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (PMID:10433915), (PMID:14691138), (PMID:28912269), (PMID:7493021), (PMID:7493022) UniProt PMID:7493021 PMID:7493022 PMID:10433915 PMID:14691138 PMID:28912269 NCBI chrNW_004624734:25,717,011...25,739,942
Ensembl chrNW_004624734:25,716,972...25,739,199 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (PMID:12975342) BHF-UCL PMID:12975342 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:17295310) BHF-UCL PMID:17295310 NCBI chrNW_004624742:5,871,155...6,080,773 JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chrNW_004624817:931,686...952,474
Ensembl chrNW_004624817:932,970...952,326 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
G Wnt8a Wnt family member 8A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chrNW_004624743:30,852,463...30,896,443
Ensembl chrNW_004624743:30,890,359...30,895,682 		JBrowse link
soft palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:10677296) UniProt PMID:10677296 NCBI chrNW_004624754:23,614,486...23,640,489
Ensembl chrNW_004624754:23,614,570...23,639,591 		JBrowse link
G Foxe1 forkhead box E1 involved_in ISO (PMID:12165566) UniProt PMID:12165566 NCBI chrNW_004624825:2,979,447...2,981,412
Ensembl chrNW_004624825:2,980,176...2,981,303 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:15254231) UniProt PMID:15254231 NCBI chrNW_004624846:4,043,010...4,046,660
Ensembl chrNW_004624846:4,044,893...4,046,248 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chrNW_004624747:386,763...395,515
Ensembl chrNW_004624747:388,904...395,098 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:5,389,464...5,463,222
Ensembl chrNW_004624806:5,389,387...5,463,240 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17646
    developmental process 6435
      anatomical structure development 6017
        roof of mouth development 102
          primary palate development 3
          primitive palate development 0
          secondary palate development + 27
paths to the root