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ONTOLOGY REPORT - ANNOTATIONS

Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO
IEA 		MGI:1857709|MGI:98728 (PMID:16845371)
GO_REF:0000107 		RGD
Ensembl		 PMID:16845371 GO_REF:0000107 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:108359 (PMID:9847249)
GO_REF:0000107 		RGD
Ensembl		 PMID:9847249 GO_REF:0000107 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA 		MGI:104621 (PMID:9847249)
GO_REF:0000107 		RGD
Ensembl		 PMID:9847249 GO_REF:0000107 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) RGD PMID:33996804 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B acts_upstream_of_or_within ISO MGI:5003050 (PMID:21636789) RGD PMID:21636789 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717 		JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (PMID:17143286) RGD PMID:17143286 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (PMID:11773073) RGD PMID:11773073 NCBI chr 5:22,601,581...22,814,107
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) RGD PMID:31600785 NCBI chr12:5,255,521...5,346,807
Ensembl chr12:5,255,740...5,346,810 		JBrowse link
G Bcor BCL6 co-repressor involved_in ISO
IEA 		(PMID:17517692)
GO_REF:0000107 		RGD
Ensembl		 PMID:17517692 GO_REF:0000107 NCBI chr  X:13,282,431...13,402,254
Ensembl chr  X:10,687,732...10,729,613 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO
IEA 		MGI:2158390|MGI:2176835 (PMID:15716346)
GO_REF:0000107 		RGD
Ensembl		 PMID:15716346 GO_REF:0000107 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bnc2 basonuclin zinc finger protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:3639337 (PMID:19706529)
GO_REF:0000107 		RGD
Ensembl		 PMID:19706529 GO_REF:0000107 NCBI chr 5:98,679,071...99,016,044
Ensembl chr 5:98,687,410...99,079,426 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO
IEA 		MGI:6113512 (PMID:28817564)
GO_REF:0000107 		RGD
Ensembl		 PMID:28817564 GO_REF:0000107 NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO
IEA 		MGI:3588650 (PMID:16207732)
GO_REF:0000107 		RGD
Ensembl		 PMID:16207732 GO_REF:0000107 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:12673280) RGD PMID:12673280 NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO
IEA 		MGI:1857275 (PMID:7276808)
GO_REF:0000107 		RGD
Ensembl		 PMID:7276808 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (PMID:25877302) RGD PMID:25877302 NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500 		JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:3526868 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 8:119,704,712...119,717,767
Ensembl chr 8:119,704,713...119,718,183 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO
IEA 		MGI:5007106 (PMID:24005908)
GO_REF:0000107 		RGD
Ensembl		 PMID:24005908 GO_REF:0000107 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO
IEA 		MGI:101927|MGI:2180474|MGI:99458 (PMID:16330189), (PMID:17420000)
GO_REF:0000107 		RGD
Ensembl		 PMID:16330189 PMID:17420000 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO
IEA 		MGI:101926|MGI:99458 (PMID:17420000)
GO_REF:0000107 		RGD
Ensembl		 PMID:17420000 GO_REF:0000107 NCBI chr 4:34,984,264...34,989,926
Ensembl chr 4:34,984,232...34,991,343 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO
IEA 		(PMID:8947026)
GO_REF:0000107 		RGD
Ensembl		 PMID:8947026 GO_REF:0000107 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO
IEA 		(PMID:8947026)
GO_REF:0000107 		RGD
Ensembl		 PMID:8947026 GO_REF:0000107 NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22304410)
GO_REF:0000107
(PMID:21177256) 		RGD
Ensembl		 PMID:21177256 PMID:22304410 GO_REF:0000107 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (PMID:19276632) RGD PMID:19276632 NCBI chr17:32,835,730...32,842,547
Ensembl chr17:32,836,777...32,842,176 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO
IEA 		MGI:5463442 (PMID:23469164)
GO_REF:0000107 		RGD
Ensembl		 PMID:23469164 GO_REF:0000107 NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090 (PMID:27158779) RGD PMID:27158779 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:9108119) 		UniProt
RGD		 PMID:9108119 GO_REF:0000024 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (PMID:17525797) RGD PMID:17525797 NCBI chr17:4,487,716...4,490,701 JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO
IEA 		MGI:2669209 (PMID:24019467)
GO_REF:0000107 		RGD
Ensembl		 PMID:24019467 GO_REF:0000107 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA 		MGI:1856276 (PMID:18816854)
GO_REF:0000107 		RGD
Ensembl		 PMID:18816854 GO_REF:0000107 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO
IEA 		MGI:3715149 (PMID:17531968), (PMID:19341725)
GO_REF:0000107 		RGD
Ensembl		 PMID:17531968 PMID:19341725 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO
IEA 		MGI:4821824 (PMID:21653639)
GO_REF:0000107 		RGD
Ensembl		 PMID:21653639 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO
IEA
ISS 		UniProtKB:Q04999 (PMID:10932194)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:10932194 GO_REF:0000024 GO_REF:0000107 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16955138) RGD PMID:16955138 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO
IEA 		MGI:1916289 (PMID:16955138)
GO_REF:0000107 		RGD
Ensembl		 PMID:16955138 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139
Ensembl chr13:32,473,742...32,494,923 		JBrowse link
G Intu inturned planar cell polarity protein involved_in ISO
IEA 		(PMID:27158779)
GO_REF:0000107 		RGD
Ensembl		 PMID:27158779 GO_REF:0000107 NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Irf6 interferon regulatory factor 6 acts_upstream_of_or_within ISO
IEA 		MGI:4457055 (PMID:21515572)
GO_REF:0000107 		RGD
Ensembl		 PMID:21515572 GO_REF:0000107 NCBI chr13:104,672,179...104,691,386
Ensembl chr13:104,672,179...104,691,386 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in ISO (PMID:26307084) RGD PMID:26307084 NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:4415718 (PMID:19653321), (PMID:19700620) RGD PMID:19653321 PMID:19700620 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:101926|MGI:101927 (PMID:17420000) RGD PMID:17420000 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2683274|MGI:3573783 (PMID:17927973) RGD PMID:17927973 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:2176174 (PMID:16284941)
GO_REF:0000107 		RGD
Ensembl		 PMID:16284941 GO_REF:0000107 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467 		JBrowse link
G Msc musculin involved_in ISO
IEA 		UniProtKB:O35437 (PMID:12493912)
GO_REF:0000107 		RGD
Ensembl		 PMID:12493912 GO_REF:0000107 NCBI chr 5:4,547,335...4,553,206
Ensembl chr 5:4,547,405...4,553,203 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in 		ISO MGI:1933766 (PMID:16330189)
(PMID:7914451) 		RGD PMID:7914451 PMID:16330189 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit acts_upstream_of_or_within ISO
IEA 		MGI:5426855 (PMID:22538705)
GO_REF:0000107 		RGD
Ensembl		 PMID:22538705 GO_REF:0000107 NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
UniProtKB:Q91ZD1 (PMID:19389375) 		UniProt
Ensembl
RGD		 PMID:19389375 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19389375) 		UniProt
Ensembl
RGD		 PMID:19389375 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Pak1ip1 PAK1 interacting protein 1 acts_upstream_of_or_within ISO MGI:5548169 (PMID:23935987) RGD PMID:23935987 NCBI chr17:23,742,217...23,753,325
Ensembl chr17:23,741,414...23,753,324 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO
IEA 		MGI:1926728 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (PMID:19412548) RGD PMID:19412548 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO
IEA 		(PMID:19097194), (PMID:19465597)
GO_REF:0000107 		RGD
Ensembl		 PMID:19097194 PMID:19465597 GO_REF:0000107 NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO
IEA 		MGI:3526857 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:185,427,982...185,479,157
Ensembl chr 1:185,428,048...185,479,156 		JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO MGI:3576024 (PMID:20007998) RGD PMID:20007998 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:1857640 (PMID:7758948)
GO_REF:0000107 		RGD
Ensembl		 PMID:7758948 GO_REF:0000107 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within ISO
IEA 		MGI:3712856 (PMID:17425782)
GO_REF:0000107 		RGD
Ensembl		 PMID:17425782 GO_REF:0000107 NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:3692768|MGI:3695425 (PMID:16751105), (PMID:16960803)
GO_REF:0000107 		RGD
Ensembl		 PMID:16751105 PMID:16960803 GO_REF:0000107 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707 		JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:3526869 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO
IEA 		MGI:3526851 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA 		MGI:1934268|MGI:2176256 (PMID:19304890)
GO_REF:0000107 		RGD
Ensembl		 PMID:19304890 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:11731796) RGD PMID:11731796 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO
IEA 		MGI:1096393 (PMID:17376812)
GO_REF:0000107 		RGD
Ensembl		 PMID:17376812 GO_REF:0000107 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:2447176|MGI:98330 (PMID:17376812) RGD PMID:17376812 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:2155441 (PMID:9030684)
GO_REF:0000107 		RGD
Ensembl		 PMID:9030684 GO_REF:0000107 NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:16990542) 		UniProt
RGD		 PMID:16990542 GO_REF:0000024 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO
IEA 		MGI:4440463 (PMID:28817564)
GO_REF:0000107 		RGD
Ensembl		 PMID:28817564 GO_REF:0000107 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO
IEA 		MGI:4415614|MGI:98495 (PMID:19769959)
GO_REF:0000107 		RGD
Ensembl		 PMID:19769959 GO_REF:0000107 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA 		MGI:98494 (PMID:19769959)
GO_REF:0000107 		RGD
Ensembl		 PMID:19769959 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
UniProtKB:O88940 (PMID:12493912) 		UniProt
Ensembl
RGD		 PMID:12493912 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO
ISS 		(PMID:21204207)
GO_REF:0000024 		RGD
UniProt		 PMID:21204207 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 acts_upstream_of_or_within ISO (PMID:16245336) RGD PMID:16245336 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO
IEA 		MGI:2388050|MGI:2680164|MGI:87912 (PMID:16806156), (PMID:16845371)
GO_REF:0000107 		RGD
Ensembl		 PMID:16806156 PMID:16845371 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA 		(PMID:20101701)
GO_REF:0000107 		RGD
Ensembl		 PMID:20101701 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) RGD PMID:25382630 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO
IEA 		MGI:3526866 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (PMID:28954202) RGD PMID:28954202 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 IEP RGD PMID:11330859 RGD:5131603 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:1859863 (PMID:10601035)
GO_REF:0000107 		RGD
Ensembl		 PMID:10601035 GO_REF:0000107 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:27158779)
GO_REF:0000107
MGI:5558098|MGI:5558100 (PMID:24302887), (PMID:27158779) 		RGD
Ensembl		 PMID:24302887 PMID:27158779 GO_REF:0000107 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 acts_upstream_of_or_within ISO MGI:1338027 (PMID:24019467) RGD PMID:24019467 NCBI chr10:14,896,442...14,898,770
Ensembl chr10:14,896,378...14,899,863 		JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within ISO
IEA 		MGI:1338027 (PMID:24019467)
GO_REF:0000107 		RGD
Ensembl		 PMID:24019467 GO_REF:0000107 NCBI chr10:79,185,563...79,191,657
Ensembl chr10:79,186,647...79,191,657 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO
IEA 		(PMID:18191119)
GO_REF:0000107 		RGD
Ensembl		 PMID:18191119 GO_REF:0000107 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
G Zfp950 zinc finger protein 950 acts_upstream_of_or_within ISO
IEA 		MGI:3526859 (PMID:17143286)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143286 GO_REF:0000107 NCBI chr 1:260,248,231...260,265,211
Ensembl chr 1:260,236,599...260,265,254 		JBrowse link
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 acts_upstream_of_or_within ISO
IEA 		MGI:2657215 (PMID:16607638)
GO_REF:0000107 		RGD
Ensembl		 PMID:16607638 GO_REF:0000107 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
hard palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO
IEA 		MGI:2680670|MGI:3710242 (PMID:11238884), (PMID:17435047)
GO_REF:0000107 		RGD
Ensembl		 PMID:11238884 PMID:17435047 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Foxe1 forkhead box E1 involved_in ISO
IEA 		(PMID:12165566)
GO_REF:0000107 		RGD
Ensembl		 PMID:12165566 GO_REF:0000107 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within ISO MGI:1888513 (PMID:20940229) RGD PMID:20940229 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO
IEA 		MGI:1196625|MGI:4442611 (PMID:20940229)
GO_REF:0000107 		RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:12606284), (PMID:7581464), (PMID:8146195), (PMID:8389469) RGD PMID:7581464 PMID:8146195 PMID:8389469 PMID:12606284 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961 		JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO
IEA 		MGI:1338035 (PMID:19118215)
GO_REF:0000107 		RGD
Ensembl		 PMID:19118215 GO_REF:0000107 NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671 		JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO MGI:96615 (PMID:19118215) RGD PMID:19118215 NCBI chr 6:140,125,002...140,208,261
Ensembl chr 6:140,127,203...140,208,476 		JBrowse link
G Mmp25 matrix metallopeptidase 25 acts_upstream_of_or_within ISO
IEA 		(PMID:20809987)
GO_REF:0000107 		RGD
Ensembl		 PMID:20809987 GO_REF:0000107 NCBI chr10:12,661,297...12,676,119
Ensembl chr10:12,661,208...12,675,871 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:15254231) 		UniProt
Ensembl
RGD		 PMID:15254231 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:30121012) RGD PMID:30121012 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
primary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO
IEA 		MGI:98715 (PMID:22228099)
GO_REF:0000107 		RGD
Ensembl		 PMID:22228099 GO_REF:0000107 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO
IEA 		MGI:3715149 (PMID:17531968)
GO_REF:0000107 		RGD
Ensembl		 PMID:17531968 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1918742 (PMID:22228099) RGD PMID:22228099 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
secondary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO
IEA 		(PMID:15300250)
GO_REF:0000107 		RGD
Ensembl		 PMID:15300250 GO_REF:0000107 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:14691138) 		Ensembl
RGD		 PMID:14691138 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrrc32 leucine rich repeat containing 32 involved_in ISO (PMID:28912269) RGD PMID:28912269 NCBI chr 1:152,785,709...152,802,997
Ensembl chr 1:152,786,511...152,798,373 		JBrowse link
G Smad2 SMAD family member 2 involved_in ISO (PMID:14691138) RGD PMID:14691138 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:14691138) 		Ensembl
RGD		 PMID:14691138 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA 		(PMID:9217007)
GO_REF:0000107 		RGD
Ensembl		 PMID:9217007 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:10433915), (PMID:14691138), (PMID:28912269), (PMID:7493021), (PMID:7493022) 		UniProt
RGD		 PMID:7493021 PMID:7493022 PMID:10433915 PMID:14691138 PMID:28912269 GO_REF:0000024 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA 		(PMID:12975342)
GO_REF:0000107 		RGD
Ensembl		 PMID:12975342 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:17295310) RGD PMID:17295310 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO
IEA 		(PMID:18413325)
GO_REF:0000107 		RGD
Ensembl		 PMID:18413325 GO_REF:0000107 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO
IEA 		(PMID:18413325)
GO_REF:0000107 		RGD
Ensembl		 PMID:18413325 GO_REF:0000107 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA 		(PMID:18413325)
GO_REF:0000107 		RGD
Ensembl		 PMID:18413325 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA 		(PMID:18413325)
GO_REF:0000107 		RGD
Ensembl		 PMID:18413325 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Wnt8a Wnt family member 8A involved_in ISO (PMID:18413325) RGD PMID:18413325 NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283 		JBrowse link
soft palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:10677296) RGD PMID:10677296 NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Foxe1 forkhead box E1 involved_in ISO
IEA 		(PMID:12165566)
GO_REF:0000107 		RGD
Ensembl		 PMID:12165566 GO_REF:0000107 NCBI chr 5:60,630,027...60,632,835
Ensembl chr 5:60,630,027...60,632,835 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:15254231) 		UniProt
Ensembl
RGD		 PMID:15254231 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:14585638) 		UniProt
RGD		 PMID:14585638 GO_REF:0000024 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (PMID:17586487) RGD PMID:17586487 NCBI chr18:77,376,399...77,452,815
Ensembl chr18:77,377,394...77,453,509 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        roof of mouth development 105
          primary palate development 3
          primitive palate development 0
          secondary palate development + 27
paths to the root