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ONTOLOGY REPORT - ANNOTATIONS


Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857709|MGI:98728 (MGI:3695190|PMID:16845371)
Ensembl
RGD
PMID:16845371 GO_REF:0000107 MGI:3695190 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:108359 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5003050 (MGI:5003056|PMID:21636789)
Ensembl
RGD
PMID:21636789 GO_REF:0000107 MGI:5003056 NCBI chr 5:62,070,709...62,094,633
Ensembl chr 5:62,071,346...62,094,633
JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:21,713,900...21,881,193
Ensembl chr20:21,564,975...21,880,715
JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (MGI:2177999|PMID:11773073) RGD PMID:11773073 MGI:2177999 NCBI chr 5:22,577,680...22,799,333
Ensembl chr 5:22,577,675...22,799,349
JBrowse link
G Bcor BCL6 co-repressor involved_in ISO (PMID:17517692) RGD PMID:17517692 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:2176835 (MGI:3574741|PMID:15716346) RGD PMID:15716346 MGI:3574741 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bnc2 basonuclin 2 acts_upstream_of_or_within ISO MGI:3639337 (MGI:4355754|PMID:19706529) RGD PMID:19706529 MGI:4355754 NCBI chr 5:102,407,508...102,807,389
Ensembl chr 5:102,415,847...102,786,331
JBrowse link
G Cdk20 cyclin-dependent kinase 20 acts_upstream_of_or_within ISO MGI:6113512 (MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3588650 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:12673280) RGD PMID:12673280 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857275 (MGI:55057|PMID:7276808)
Ensembl
RGD
PMID:7276808 GO_REF:0000107 MGI:55057 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within ISO MGI:5297398 (MGI:5648689|PMID:25877302) RGD PMID:25877302 MGI:5648689 NCBI chr 2:57,274,175...57,350,003
NCBI chr 2:57,444,373...57,472,465
Ensembl chr 2:57,276,919...57,348,481
JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO MGI:3526868 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 8:128,659,883...128,673,339
Ensembl chr 8:128,659,868...128,672,284
JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO MGI:5007106 (MGI:5528782|PMID:24005908) RGD PMID:24005908 MGI:5528782 NCBI chr 5:162,809,090...162,843,385
Ensembl chr 5:162,808,646...162,843,383
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101927|MGI:2180474|MGI:99458 (MGI:3611627|PMID:16330189), (MGI:3714538|PMID:17420000)
Ensembl
RGD
PMID:16330189 PMID:17420000 GO_REF:0000107 MGI:3611627 MGI:3714538 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO MGI:101926|MGI:99458 (MGI:3714538|PMID:17420000) RGD PMID:17420000 MGI:3714538 NCBI chr 4:32,373,096...32,377,388
Ensembl chr 4:32,373,641...32,377,253
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Foxe1 forkhead box E1 involved_in
acts_upstream_of_or_within
ISO (MGI:4939531|PMID:21177256)
(MGI:5776679|PMID:22304410)
RGD PMID:21177256 PMID:22304410 MGI:4939531 MGI:5776679 NCBI chr 5:61,954,549...61,957,357
Ensembl chr 5:61,954,549...61,957,357
JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (PMID:19276632) RGD PMID:19276632 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO MGI:5463442 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr14:14,438,392...14,853,016
Ensembl chr14:14,439,082...14,689,554
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090 (MGI:5912570|PMID:27158779) RGD PMID:27158779 MGI:5912570 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:87150|PMID:9108119)
UniProt
RGD
PMID:9108119 GO_REF:0000024 MGI:87150 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2669209 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3809315|PMID:18816854) RGD PMID:18816854 MGI:3809315 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO MGI:3715149 (MGI:3714871|PMID:17531968), (MGI:3848084|PMID:19341725) RGD PMID:17531968 PMID:19341725 MGI:3714871 MGI:3848084 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO MGI:4821824 (MGI:5285455|PMID:21653639) RGD PMID:21653639 MGI:5285455 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Inhba inhibin subunit beta A involved_in ISO
ISS
UniProtKB:Q04999 (PMID:10932194)
GO_REF:0000024
RGD
UniProt
PMID:10932194 GO_REF:0000024 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO MGI:1916289 (MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:3689278 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Intu inturned planar cell polarity protein involved_in ISO
IEA
(PMID:27158779)
GO_REF:0000107
RGD
Ensembl
PMID:27158779 GO_REF:0000107 NCBI chr 2:127,459,089...127,521,327
Ensembl chr 2:127,459,012...127,525,437
JBrowse link
G Irf6 interferon regulatory factor 6 acts_upstream_of_or_within ISO MGI:4457055 (MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:5050793 NCBI chr13:111,870,121...111,889,328
Ensembl chr13:111,870,121...111,889,328
JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in ISO (MGI:5697239|PMID:26307084) RGD PMID:26307084 MGI:5697239 NCBI chr 4:113,866,782...113,883,713
Ensembl chr 4:113,866,804...113,883,477
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2156191|MGI:4415718 (MGI:4358010|PMID:19700620), (MGI:4413396|PMID:19653321)
RGD PMID:19653321 PMID:19700620, PMID:21873635 MGI:4358010 MGI:4413396, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:101926|MGI:101927 (MGI:3714538|PMID:17420000) RGD PMID:17420000 MGI:3714538 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2683274|MGI:3573783 (MGI:3763871|PMID:17927973) RGD PMID:17927973 MGI:3763871 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176174 (MGI:3611525|PMID:16284941)
Ensembl
RGD
PMID:16284941 GO_REF:0000107 MGI:3611525 NCBI chr 6:56,625,768...56,689,195
Ensembl chr 6:56,625,650...56,689,238
JBrowse link
G Msc musculin involved_in ISO UniProtKB:O35437 (MGI:3653784|PMID:12493912) RGD PMID:12493912 MGI:3653784 NCBI chr 5:3,954,902...3,956,974
Ensembl chr 5:3,955,227...3,956,572
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (MGI:3611627|PMID:16330189) RGD PMID:16330189 MGI:3611627 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit acts_upstream_of_or_within ISO MGI:5426855 (MGI:5319707|PMID:22538705) RGD PMID:22538705 MGI:5319707 NCBI chr10:15,620,824...15,661,332
Ensembl chr10:15,620,871...15,661,331
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q91ZD1 (MGI:3848564|PMID:19389375)
UniProt
RGD
PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3848564|PMID:19389375)
UniProt
RGD
PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pak1ip1 PAK1 interacting protein 1 acts_upstream_of_or_within ISO MGI:5548169 (MGI:5532609|PMID:23935987) RGD PMID:23935987 MGI:5532609 NCBI chr17:21,579,987...21,591,064
Ensembl chr17:21,580,087...21,591,203
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (MGI:3696608|PMID:17143286)
Ensembl
RGD
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr14:44,185,445...44,282,308
Ensembl chr14:44,185,446...44,280,079
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:3813934|PMID:19097194), (MGI:4438146|PMID:19465597) RGD PMID:19097194 PMID:19465597 MGI:3813934 MGI:4438146 NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
JBrowse link
G Plekha1 pleckstrin homology domain containing A1 acts_upstream_of_or_within ISO MGI:3526857 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 1:201,429,716...201,481,411
Ensembl chr 1:201,429,771...201,480,877
JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO MGI:3576024 (MGI:4430027|PMID:20007998) RGD PMID:20007998 MGI:4430027 NCBI chr 5:171,662,277...171,711,561
Ensembl chr 5:171,662,277...171,710,316
JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640 (MGI:73363|PMID:7758948) RGD PMID:7758948 MGI:73363 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within ISO MGI:3712856 (MGI:3712628|PMID:17425782) RGD PMID:17425782 MGI:3712628 NCBI chr 2:188,757,167...188,762,285
Ensembl chr 2:188,757,489...188,762,282
JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768|MGI:3695425 (MGI:3692344|PMID:16751105), (MGI:3695004|PMID:16960803) RGD PMID:16751105 PMID:16960803 MGI:3692344 MGI:3695004 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO MGI:3526869 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 2:172,312,290...173,087,236
Ensembl chr 2:172,312,298...172,459,165
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO MGI:3526851 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:30,699,936...30,769,178
Ensembl chr20:30,699,872...30,749,940
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1934268|MGI:2176256 (MGI:3840017|PMID:19304890)
Ensembl
RGD
PMID:19304890 GO_REF:0000107 MGI:3840017 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:1096393 (MGI:3709678|PMID:17376812) RGD PMID:17376812 MGI:3709678 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:2447176|MGI:98330 (MGI:3709678|PMID:17376812) RGD PMID:17376812 MGI:3709678 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:2155441 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:3,105,443...3,182,977
Ensembl chr 6:3,104,861...3,182,996
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3663824|PMID:16990542)
UniProt
RGD
PMID:16990542 GO_REF:0000024 MGI:3663824 NCBI chr 9:66,453,428...66,483,614
Ensembl chr 9:66,453,438...66,483,614
JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO MGI:4440463 (MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:5912686 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO MGI:4415614|MGI:98495 (MGI:4411938|PMID:19769959) RGD PMID:19769959 MGI:4411938 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:98494 (MGI:4411938|PMID:19769959) RGD PMID:19769959 MGI:4411938 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O88940 (MGI:3653784|PMID:12493912)
UniProt
RGD
PMID:12493912 GO_REF:0000024 MGI:3653784 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO
ISS
(PMID:21204207)
GO_REF:0000024
RGD
UniProt
PMID:21204207 GO_REF:0000024 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tgfb3 transforming growth factor, beta 3 acts_upstream_of_or_within ISO (MGI:3623536|PMID:16245336) RGD PMID:16245336 MGI:3623536 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2388050|MGI:2680164|MGI:87912 (MGI:3695190|PMID:16845371), (MGI:3701721|PMID:16806156) RGD PMID:16806156 PMID:16845371 MGI:3695190 MGI:3701721 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (MGI:5617089|PMID:25382630) RGD PMID:25382630 MGI:5617089 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO MGI:3526866 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 2:157,316,293...157,342,979
Ensembl chr 2:157,316,266...157,341,469
JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (MGI:6115041|PMID:28954202) RGD PMID:28954202 MGI:6115041 NCBI chr10:55,653,694...55,656,270
Ensembl chr10:55,653,946...55,656,270
JBrowse link
G Twist1 twist family bHLH transcription factor 1 IEP RGD PMID:11330859 RGD:5131603 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Vax1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO MGI:1859863 (MGI:1350761|PMID:10601035) RGD PMID:10601035 MGI:1350761 NCBI chr 1:280,334,897...280,338,813
Ensembl chr 1:280,334,897...280,338,813
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:27158779)
MGI:5558098|MGI:5558100 (MGI:5544506|PMID:24302887), (MGI:5912570|PMID:27158779)
GO_REF:0000107
RGD
Ensembl
PMID:24302887 PMID:27158779 GO_REF:0000107 MGI:5544506 MGI:5912570 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 acts_upstream_of_or_within ISO MGI:1338027 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:15,243,429...15,245,757
Ensembl chr10:15,243,429...15,245,757
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within ISO MGI:1338027 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:81,936,156...81,943,142
Ensembl chr10:81,936,444...81,942,188
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO (MGI:3775898|PMID:18191119) RGD PMID:18191119 MGI:3775898 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
G Zfp950 zinc finger protein 950 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 1:282,490,698...282,492,912 JBrowse link
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2657215 (MGI:3624929|PMID:16607638)
Ensembl
RGD
PMID:16607638 GO_REF:0000107 MGI:3624929 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
hard palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2680670|MGI:3710242 (MGI:1930428|PMID:11238884), (MGI:3709697|PMID:17435047)
Ensembl
RGD
PMID:11238884 PMID:17435047 GO_REF:0000107 MGI:1930428 MGI:3709697 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Foxe1 forkhead box E1 involved_in ISO (PMID:12165566) RGD PMID:12165566 NCBI chr 5:61,954,549...61,957,357
Ensembl chr 5:61,954,549...61,957,357
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1888513 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1196625|MGI:4442611 (MGI:4837757|PMID:20940229)
Ensembl
RGD
PMID:20940229 GO_REF:0000107 MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (MGI:2657056|PMID:12606284), (MGI:60795|PMID:8389469), (MGI:66597|PMID:8146195), (MGI:77623|PMID:7581464) RGD PMID:7581464 PMID:8146195 PMID:8389469 PMID:12606284 MGI:2657056 MGI:60795 MGI:66597 MGI:77623 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO MGI:1338035 (MGI:3836488|PMID:19118215) RGD PMID:19118215 MGI:3836488 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO MGI:96615 (MGI:3836488|PMID:19118215) RGD PMID:19118215 MGI:3836488 NCBI chr 6:147,089,280...147,172,846
Ensembl chr 6:147,094,097...147,172,813
JBrowse link
G Mmp25 matrix metallopeptidase 25 acts_upstream_of_or_within ISO (MGI:4838340|PMID:20809987) RGD PMID:20809987 MGI:4838340 NCBI chr10:12,962,214...12,966,377 JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:3052265|PMID:15254231)
UniProt
RGD
PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:6276435|PMID:30121012) RGD PMID:30121012 MGI:6276435 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
primary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO MGI:98715 (MGI:5314314|PMID:22228099) RGD PMID:22228099 MGI:5314314 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3715149 (MGI:3714871|PMID:17531968)
Ensembl
RGD
PMID:17531968 GO_REF:0000107 MGI:3714871 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1918742 (MGI:5314314|PMID:22228099) RGD PMID:22228099 MGI:5314314 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
secondary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:15300250) RGD PMID:15300250 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2683382|PMID:14691138)
Ensembl
RGD
PMID:14691138 GO_REF:0000107 MGI:2683382 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lrrc32 leucine rich repeat containing 32 involved_in ISO (MGI:5920420|PMID:28912269) RGD PMID:28912269 MGI:5920420 NCBI chr 1:163,443,972...163,457,426
Ensembl chr 1:163,445,527...163,457,424
JBrowse link
G Smad2 SMAD family member 2 involved_in ISO (MGI:2683382|PMID:14691138) RGD PMID:14691138 MGI:2683382 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:2683382|PMID:14691138)
Ensembl
RGD
PMID:14691138 GO_REF:0000107 MGI:2683382 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:1341549|PMID:10433915), (MGI:2683382|PMID:14691138), (MGI:5920420|PMID:28912269), (MGI:77426|PMID:7493021), (MGI:77427|PMID:7493022)
UniProt
RGD
PMID:7493021 PMID:7493022 PMID:10433915 PMID:14691138 PMID:28912269 GO_REF:0000024 MGI:1341549 MGI:2683382 MGI:5920420 MGI:77426 MGI:77427 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO (MGI:2678274|PMID:12975342) RGD PMID:12975342 MGI:2678274 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:3699491|PMID:17295310) RGD PMID:17295310 MGI:3699491 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:18413325) RGD PMID:18413325 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:18413325) RGD PMID:18413325 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:18413325)
GO_REF:0000107
RGD
Ensembl
PMID:18413325 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:18413325) RGD PMID:18413325 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Wnt8a Wnt family member 8A involved_in ISO (PMID:18413325) RGD PMID:18413325 NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829
JBrowse link
soft palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a2 collagen type XI alpha 2 chain involved_in ISO (PMID:10677296) RGD PMID:10677296 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Foxe1 forkhead box E1 involved_in ISO (PMID:12165566) RGD PMID:12165566 NCBI chr 5:61,954,549...61,957,357
Ensembl chr 5:61,954,549...61,957,357
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:3052265|PMID:15254231)
UniProt
RGD
PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO
ISS
(PMID:14585638)
GO_REF:0000024
RGD
UniProt
PMID:14585638 GO_REF:0000024 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:3720547 NCBI chr18:80,860,995...80,907,744
Ensembl chr18:80,862,372...80,865,584
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        roof of mouth development 102
          primary palate development 3
          primitive palate development 0
          secondary palate development + 27
paths to the root