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ONTOLOGY REPORT - ANNOTATIONS

Term:digestive system development
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Accession:GO:0055123 term browser browse the term
Definition:The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.

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digestive system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARX1 BARX homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:104,299,516...104,307,613
Ensembl chr12:104,303,265...104,306,251 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:2,696,382...2,699,054
Ensembl chr 1:2,696,233...2,699,028 		JBrowse link
G CELA1 chymotrypsin like elastase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,526,354...47,545,390
Ensembl chr11:47,526,365...47,544,726 		JBrowse link
G GIP gastric inhibitory polypeptide ISO RGD PMID:8674860 RGD:2312540 NCBI chr16:69,367,030...69,377,563
Ensembl chr16:69,367,207...69,377,155 		JBrowse link
G HIP1R huntingtin interacting protein 1 related involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:118,173,302...118,202,840
Ensembl chr11:118,173,544...118,202,985 		JBrowse link
G NKX3-2 NK3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:36,641,837...36,647,917
Ensembl chr27:36,641,932...36,644,353 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr14:43,425,405...43,896,015
Ensembl chr14:43,526,525...43,898,300 		JBrowse link
G WDR19 WD repeat domain 19 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:11,019,897...11,113,760
Ensembl chr27:11,018,827...11,113,666 		JBrowse link
chordate pharynx development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRD chordin involved_in ISO (PMID:12810603) MGI PMID:12810603 NCBI chr15:5,030,618...5,040,399
Ensembl chr15:5,030,457...5,039,991 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr19:4,855,633...4,889,674
Ensembl chr19:4,855,611...4,890,302 		JBrowse link
G EDNRB endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,969,493...56,993,719
Ensembl chr 3:56,969,101...56,992,731 		JBrowse link
G FOXE1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:41,555,901...41,559,914
Ensembl chr12:41,557,568...41,558,686 		JBrowse link
cloacal septation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (PMID:12368184) MGI PMID:12368184 NCBI chr15:83,861,489...84,126,675 JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr15:84,093,957...84,123,905 JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:67,393,975...67,427,247
Ensembl chr 1:67,399,074...67,418,509 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:72,004,705...72,063,438 JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF19 dynein axonemal assembly factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G CCKBR cholecystokinin B receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:58,555,463...58,569,949
Ensembl chr 1:58,555,321...58,568,031 		JBrowse link
G CCNB1 cyclin B1 ISO perinatal small intestine RGD PMID:17692466 RGD:2316322 NCBI chr 4:65,265,798...65,276,465
Ensembl chr 4:65,265,844...65,277,085 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:11595646 RGD:628450 NCBI chr21:68,214,875...68,309,336
Ensembl chr21:68,216,201...68,268,669 		JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within 		IEA Ensembl GO_REF:0000107 NCBI chr29:21,856,434...21,924,761
Ensembl chr29:21,856,263...21,924,787 		JBrowse link
G CLDN18 claudin 18 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:52,509,568...52,533,205
Ensembl chr15:52,508,887...52,532,836 		JBrowse link
G CLMP CXADR like membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:114,461,052...114,575,178
Ensembl chr 1:114,462,833...114,575,154 		JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:7,501,647...7,803,175
Ensembl chr21:7,598,126...7,803,177 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within 		ISO (PMID:20587693)
(PMID:9050868) 		MGI PMID:9050868 PMID:20587693 NCBI chr10:74,455,133...74,493,392 JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO RGD PMID:12162855 RGD:727721 NCBI chr26:8,753,236...8,759,378
Ensembl chr26:8,753,327...8,759,384 		JBrowse link
G DCHS1 dachsous cadherin-related 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:58,170,494...58,204,156
Ensembl chr 1:58,184,591...58,205,962 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:17916272 RGD:2312267 NCBI chr19:23,634,132...23,726,095
Ensembl chr19:23,634,571...23,724,979 		JBrowse link
G FAT4 FAT atypical cadherin 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:72,498,182...72,686,607
Ensembl chr 7:72,500,264...72,685,546 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:15234214) MGI PMID:15234214 NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G HRH2 histamine receptor H2 acts_upstream_of_or_within ISO (PMID:10862789)
(PMID:15476751) 		MGI PMID:10862789 PMID:15476751 NCBI chr23:77,808,108...77,858,936
Ensembl chr23:77,807,998...77,841,467 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,808,104...13,891,003
Ensembl chr 7:13,808,037...13,890,976 		JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:37,632,748...37,741,100
Ensembl chr 1:37,632,710...37,741,330 		JBrowse link
G LOC103215403 arylamine N-acetyltransferase 2 ISO RGD PMID:18799802 RGD:2303764 NCBI chr 8:16,451,144...16,494,961
Ensembl chr 8:16,493,749...16,494,621 		JBrowse link
G LOC103242066 mucin-4 ISO RGD PMID:15389518 RGD:2303738 NCBI chr15:91,313,060...91,345,172 JBrowse link
G LOC103246095 creatine kinase U-type, mitochondrial ISO RGD PMID:8086475 RGD:11565082 NCBI chr26:39,397,797...39,401,046 JBrowse link
G MIXL1 Mix paired-like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:3,542,923...3,546,561
Ensembl chr25:3,544,169...3,546,305 		JBrowse link
G MUC19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) MGI PMID:37475871 NCBI chr11:36,679,954...36,829,714 JBrowse link
G MYOCD myocardin acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:11,923,464...12,100,897
Ensembl chr16:12,000,197...12,095,552 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 acts_upstream_of_or_within ISO (PMID:36720308) MGI PMID:36720308 NCBI chr10:62,789,647...62,825,651
Ensembl chr10:62,790,124...62,825,339 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271 		JBrowse link
G NKX2-2 NK2 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:50,499,802...50,511,309
Ensembl chr 2:50,500,691...50,502,438 		JBrowse link
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842 		JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:21,820,940...21,827,124
Ensembl chr 8:21,821,711...21,825,801 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,795,822...44,844,464
Ensembl chr12:44,793,253...44,813,671 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO intestine RGD PMID:17341476 RGD:401827282 NCBI chr 1:18,041,495...18,061,196
Ensembl chr 1:18,041,830...18,051,501 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:11984532 RGD:1625207 NCBI chr11:95,792,428...95,877,989
Ensembl chr11:95,792,996...95,878,293 		JBrowse link
G NTS neurotensin ISO RGD PMID:8571204 RGD:9743850 NCBI chr11:81,270,147...81,278,327
Ensembl chr11:81,270,593...81,277,713 		JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:19003903 RGD:2303961 NCBI chr22:44,746,108...44,764,501
Ensembl chr22:44,742,419...44,763,243 		JBrowse link
G PDGFA platelet derived growth factor subunit A acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:23938297) MGI
Ensembl		 PMID:23938297 GO_REF:0000107 NCBI chr28:21,044,549...21,068,411
Ensembl chr28:21,047,219...21,069,827 		JBrowse link
G PDGFC platelet derived growth factor C acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:103,345,122...103,562,961
Ensembl chr 7:103,344,895...103,562,962 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:7,038,088...7,046,593
Ensembl chr 3:7,041,466...7,045,976 		JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,985,165...2,031,518
Ensembl chr 5:1,983,632...2,015,551 		JBrowse link
G RB1 RB transcriptional corepressor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546 		JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO (PMID:26291700) MGI PMID:26291700 NCBI chr 3:26,401,787...26,447,315
Ensembl chr 3:26,401,786...26,437,619 		JBrowse link
G SLC4A2 solute carrier family 4 member 2 ISO RGD PMID:8770049 RGD:9999233 NCBI chr21:119,240,352...119,258,920
Ensembl chr21:119,241,490...119,263,193 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G TGFB1 transforming growth factor beta 1 ISO RGD PMID:12815632 RGD:2302031 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:12815632 RGD:2302031 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:12815632 RGD:2302031 NCBI chr24:53,203,593...53,227,483
Ensembl chr24:53,203,301...53,227,325 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 ISO RGD PMID:12815632 RGD:2302031 NCBI chr12:40,272,507...40,321,740
Ensembl chr12:40,276,916...40,297,372 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO RGD PMID:12815632 RGD:2302031 NCBI chr15:75,112,903...75,200,263
Ensembl chr15:75,112,561...75,197,711 		JBrowse link
G THRA thyroid hormone receptor alpha ISO RGD PMID:17496154 RGD:2314319 NCBI chr16:66,087,071...66,118,137 JBrowse link
G TK1 thymidine kinase 1 ISO RGD PMID:6701043 RGD:2317231 NCBI chr16:70,186,103...70,200,689
Ensembl chr16:70,186,767...70,200,610 		JBrowse link
digestive tract mesoderm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule ISO RGD PMID:9368764 RGD:2306312 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGR2 anterior gradient 2, protein disulphide isomerase family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,311,250...41,324,806
Ensembl chr21:41,312,415...41,326,663 		JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:16,440,560...16,643,187
Ensembl chr18:16,441,733...16,637,895 		JBrowse link
G EGFR epidermal growth factor receptor acts_upstream_of_or_within ISO (PMID:7618084) MGI PMID:7618084 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239 		JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,831,980...4,852,586
Ensembl chr15:4,832,750...4,852,152 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:19407216) MGI PMID:19407216 NCBI chr27:46,958,444...46,974,032
Ensembl chr27:46,957,254...46,973,392 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G IL18 interleukin 18 ISO RGD PMID:21088234 RGD:4889157 NCBI chr 1:103,485,868...103,511,632
Ensembl chr 1:103,482,083...103,510,150 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:60,852,567...60,863,225
Ensembl chr 9:60,853,763...60,862,839 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,795,822...44,844,464
Ensembl chr12:44,793,253...44,813,671 		JBrowse link
G PERCC1 proline and glutamate rich with coiled coil 1 involved_in ISO (PMID:31217582) UniProt PMID:31217582 NCBI chr 5:1,320,002...1,322,547 JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:39,243,775...39,289,050
Ensembl chr 8:39,243,780...39,288,984 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:100,336,442...100,345,093
Ensembl chr 7:100,336,119...100,345,086 		JBrowse link
G SFRP5 secreted frizzled related protein 5 involved_in
acts_upstream_of_or_within 		ISO (PMID:18981481)
(PMID:19300477) 		BHF-UCL
MGI		 PMID:18981481 PMID:19300477 NCBI chr 9:90,931,819...90,938,156 JBrowse link
G SFRP5 secreted frizzled related protein 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:90,931,867...90,936,859 JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SOX10 SRY-box transcription factor 10 acts_upstream_of_or_within ISO (PMID:15843399), (PMID:6512238) MGI PMID:6512238 PMID:15843399 NCBI chr19:20,673,053...20,685,506 JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,275,317...9,311,302
Ensembl chr26:9,278,303...9,311,475 		JBrowse link
G STX2 syntaxin 2 ISO RGD PMID:12464668 RGD:1298909 NCBI chr11:126,174,446...126,225,342
Ensembl chr11:126,178,803...126,224,277 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:127,958,002...128,035,792
Ensembl chr20:127,958,809...128,013,691 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
embryonic digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465) MGI PMID:7670465 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,202,497...22,205,730
Ensembl chr 7:22,202,527...22,204,068 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:1,779,126...1,811,427
Ensembl chr 3:1,779,192...1,812,784 		JBrowse link
G FOXF1 forkhead box F1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G FOXF2 forkhead box F2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:70,744,989...70,750,860
Ensembl chr17:70,745,011...70,750,652 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G MYB MYB proto-oncogene, transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:38,203,923...38,242,148
Ensembl chr13:38,203,731...38,241,864 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:86,907,173...87,367,935
Ensembl chr12:87,042,557...87,367,033 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in ISO (PMID:19097194) UniProt PMID:19097194 NCBI chr14:65,203,757...65,214,386
Ensembl chr14:65,204,620...65,214,190 		JBrowse link
G RARB retinoic acid receptor beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,851,447...70,266,215
Ensembl chr15:70,096,117...70,264,905 		JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:118,487,199...118,490,561
Ensembl chr21:118,487,506...118,489,516 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,928,711...36,944,158
Ensembl chr 5:36,927,990...36,943,630 		JBrowse link
G SCT secretin ISO RGD PMID:1711228 RGD:729899 NCBI chr 1:444,487...445,535
Ensembl chr 1:444,601...445,339 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,275,317...9,311,302
Ensembl chr26:9,278,303...9,311,475 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TNF tumor necrosis factor involved_in ISO (PMID:20875417) DFLAT PMID:20875417
embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:21550054)
(PMID:16618415), (PMID:21492869) 		MGI PMID:16618415 PMID:21492869 PMID:21550054 NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:16127717) MGI PMID:16127717 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr25:8,641,386...8,647,485
Ensembl chr25:8,641,752...8,646,563 		JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:30,033,486...30,097,106
Ensembl chr16:30,036,766...30,097,088 		JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (PMID:16888283) UniProt PMID:16888283 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271 		JBrowse link
G OVOL2 ovo like zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:47,082,294...47,118,880
Ensembl chr 2:47,082,167...47,117,521 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:14,243,291...14,307,373
Ensembl chr 7:14,241,070...14,307,422 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SHOX2 SHOX homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:32,684,598...32,694,640
Ensembl chr15:32,684,705...32,692,699 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:62,212,920...62,219,976
Ensembl chr14:62,213,115...62,220,069 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:101,982,551...101,991,305
Ensembl chr14:101,989,895...101,991,220 		JBrowse link
G TCF21 transcription factor 21 ISO RGD PMID:11804032 RGD:727206 NCBI chr13:39,607,179...39,610,336
Ensembl chr13:39,607,182...39,610,388 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr 9:105,828,834...106,047,810 JBrowse link
embryonic ectodermal digestive tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VPS52 VPS52 subunit of GARP complex acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:38,805,072...38,824,526
Ensembl chr17:38,805,355...38,825,383 		JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
embryonic foregut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:10921901) MGI PMID:10921901 NCBI chr15:923,222...962,438 JBrowse link
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr15:933,070...939,419 JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:10,113,695...10,288,003
Ensembl chr10:10,121,075...10,287,954 		JBrowse link
G FOXF1 forkhead box F1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:15361625) MGI PMID:15361625 NCBI chr17:30,554,702...30,608,845
Ensembl chr17:30,554,055...30,589,849 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136933)
(PMID:9136932) 		MGI PMID:9136932 PMID:9136933 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562 		JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:68,434,839...68,546,431
Ensembl chr10:68,433,258...68,545,990 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMAD2 SMAD family member 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:33,017,138...33,105,320
Ensembl chr18:33,017,492...33,104,606 		JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527 		JBrowse link
G SOX17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in 		ISO (PMID:18462699)
(PMID:21305474)
(PMID:19619492) 		MGI
BHF-UCL		 PMID:18462699 PMID:19619492 PMID:21305474 NCBI chr 8:50,523,816...50,527,360
Ensembl chr 8:50,524,893...50,527,847 		JBrowse link
embryonic hindgut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DACT1 dishevelled binding antagonist of beta catenin 1 involved_in ISO (PMID:20145239) UniProt PMID:20145239 NCBI chr24:35,821,518...35,832,486
Ensembl chr24:35,821,990...35,832,712 		JBrowse link
G HOXA13 homeobox A13 ISO RGD PMID:17161201 RGD:1599527 NCBI chr21:31,168,239...31,175,960
Ensembl chr21:31,168,793...31,173,056 		JBrowse link
G HOXD13 homeobox D13 ISO RGD PMID:17161201 RGD:1599527 NCBI chr10:61,662,670...61,670,955
Ensembl chr10:61,667,880...61,669,743 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr23:36,919,648...36,953,088
Ensembl chr23:36,919,745...36,951,192 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr 9:105,828,834...106,047,810 JBrowse link
endodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:21550054) MGI PMID:21550054 NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (PMID:16888283) UniProt PMID:16888283 NCBI chr14:98,962,001...98,964,486 JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr14:98,961,546...98,964,384 JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISO (PMID:21305474) BHF-UCL PMID:21305474 NCBI chr 8:50,523,816...50,527,360
Ensembl chr 8:50,524,893...50,527,847 		JBrowse link
enteric smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,969,493...56,993,719
Ensembl chr 3:56,969,101...56,992,731 		JBrowse link
enterocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
exocrine pancreas development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELA1 chymotrypsin like elastase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:47,526,354...47,545,390
Ensembl chr11:47,526,365...47,544,726 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:97,624,498...97,708,730
Ensembl chr11:97,631,189...97,707,308 		JBrowse link
G IGF1R insulin like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:12101187) MGI PMID:12101187 NCBI chr29:17,212,206...17,534,036
Ensembl chr29:17,459,404...17,526,930 		JBrowse link
G IGF2 insulin like growth factor 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:1,937,414...1,951,238
Ensembl chr 1:1,936,830...1,945,388 		JBrowse link
G INSR insulin receptor acts_upstream_of_or_within ISO (PMID:12101187) MGI PMID:12101187 NCBI chr 6:6,625,951...6,803,610
Ensembl chr 6:6,630,777...6,803,592 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:29,230,358...29,380,617
Ensembl chr25:29,233,558...29,379,922 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:7,038,088...7,046,593
Ensembl chr 3:7,041,466...7,045,976 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,944,122...22,965,905
Ensembl chr 9:22,964,164...22,965,565 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr20:64,879,594...64,987,460
Ensembl chr20:64,879,864...64,977,038 		JBrowse link
G XBP1 X-box binding protein 1 acts_upstream_of_or_within ISO (PMID:16362047) MGI PMID:16362047 NCBI chr19:11,670,605...11,677,168 JBrowse link
foregut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOTCH1 notch receptor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
hindgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FILIP1L filamin A interacting protein 1 like acts_upstream_of_or_within ISO (PMID:26655467) MGI PMID:26655467 NCBI chr22:80,959,751...81,044,074
Ensembl chr22:80,960,261...81,065,200 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (PMID:21653639) MGI PMID:21653639 NCBI chr14:80,130,436...80,171,259 JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr14:80,138,354...80,171,200 JBrowse link
hindgut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21383503) MGI PMID:21383503 NCBI chr21:50,965,519...51,047,863 JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (PMID:22766025) MGI PMID:22766025 NCBI chr 5:58,578,244...58,679,677
Ensembl chr 5:58,578,146...58,679,541 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G GSDMC gasdermin C involved_in ISO (PMID:17350798) UniProt PMID:17350798 NCBI chr 8:124,247,934...124,291,282 JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:52,174,893...52,232,475
Ensembl chr 4:52,174,312...52,214,584 		JBrowse link
G KLF5 KLF transcription factor 5 acts_upstream_of_or_within ISO (PMID:23266329) MGI PMID:23266329 NCBI chr 3:52,188,139...52,210,882 JBrowse link
G NKX3-2 NK3 homeobox 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr27:36,641,837...36,647,917
Ensembl chr27:36,641,932...36,644,353 		JBrowse link
G PRDM1 PR/SET domain 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931 		JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr17:37,555,797...37,562,522
Ensembl chr17:37,555,820...37,562,036 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
G YIPF6 Yip1 domain family member 6 acts_upstream_of_or_within ISO (PMID:22802641) MGI PMID:22802641 NCBI chr  X:58,345,915...58,381,517
Ensembl chr  X:58,346,203...58,379,743 		JBrowse link
intestinal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFA2T2 CBFA2/RUNX1 partner transcriptional co-repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:37,781,107...37,938,150
Ensembl chr 2:37,781,273...37,937,253 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:7,080,142...7,088,010
Ensembl chr 3:7,078,503...7,087,285 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562 		JBrowse link
G GATA5 GATA binding protein 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:1,756,911...1,769,452
Ensembl chr 2:1,757,420...1,768,143 		JBrowse link
G GATA6 GATA binding protein 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr18:58,312,328...58,345,472
Ensembl chr18:58,311,482...58,343,746 		JBrowse link
G PTK6 protein tyrosine kinase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:667,440...676,380
Ensembl chr 2:667,510...676,109 		JBrowse link
G SAV1 salvador family WW domain containing protein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:27,710,256...27,747,638
Ensembl chr24:27,711,970...27,747,647 		JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chr17:35,445,668...35,454,334
Ensembl chr17:35,445,223...35,454,342 		JBrowse link
G FZD5 frizzled class receptor 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr10:93,545,792...93,553,092
Ensembl chr10:93,550,189...93,551,946 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G HOXA5 homeobox A5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr21:31,224,017...31,227,819
Ensembl chr21:31,224,977...31,227,994 		JBrowse link
G SI sucrase-isomaltase ISO RGD PMID:18313392 RGD:597538476 NCBI chr15:24,480,060...24,582,468
Ensembl chr15:24,482,865...24,582,394 		JBrowse link
G TMIGD1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (PMID:33129760) MGI PMID:33129760 NCBI chr16:24,042,832...24,063,054 JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chr18:60,030,640...60,043,297
Ensembl chr18:60,030,658...60,041,856 		JBrowse link
midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:15964596 RGD:1643113 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:15964596 RGD:1643113 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:10050048 RGD:4144052 NCBI chr24:44,851,139...44,884,118
Ensembl chr24:44,851,175...44,883,853 		JBrowse link
G ASL argininosuccinate lyase ISO RGD PMID:9544996 RGD:4139911 NCBI chr28:1,782,434...1,800,581
Ensembl chr28:1,782,553...1,802,517 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO RGD PMID:9544996 RGD:4139911 NCBI chr12:7,643,484...7,701,334 JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO RGD PMID:9544996 RGD:4139911 NCBI chr10:96,267,890...96,392,393
Ensembl chr10:96,267,889...96,392,206 		JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:17356920 RGD:2289844 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G DAB1 DAB adaptor protein 1 ISO RGD PMID:19946030 RGD:2317766 NCBI chr20:74,727,084...75,968,434
Ensembl chr20:75,541,508...75,968,427 		JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:7926492 RGD:10395256 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239 		JBrowse link
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:8620869 RGD:2326125 NCBI chr20:14,018,669...14,040,934
Ensembl chr20:14,019,692...14,041,016 		JBrowse link
G LOC103248365 caspase-1 ISO RGD PMID:12396474 RGD:5130192 NCBI chr 1:96,389,697...96,400,610
Ensembl chr 1:96,389,657...96,400,849 		JBrowse link
G OTC ornithine transcarbamylase ISO RGD PMID:9544996 RGD:4139911 NCBI chr  X:35,494,334...35,570,923
Ensembl chr  X:35,494,287...35,570,845 		JBrowse link
G RELN reelin ISO RGD PMID:19946030 RGD:2317766 NCBI chr21:72,440,988...72,951,173
Ensembl chr21:72,440,160...72,950,747 		JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:15964596 RGD:1643113 NCBI chr12:3,704,129...3,814,707
Ensembl chr12:3,699,923...3,814,678 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243 		JBrowse link
G NKX6-3 NK6 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:39,620,972...39,627,298
Ensembl chr 8:39,620,990...39,625,052 		JBrowse link
positive regulation of intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103227720 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,581,102...13,598,830
Ensembl chr22:13,589,034...13,598,752
Ensembl chr22:13,589,034...13,598,752 		JBrowse link
post-embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-3 NK2 homeobox 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:92,590,342...92,594,749
Ensembl chr 9:92,591,375...92,594,842 		JBrowse link
posterior midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:56,969,493...56,993,719
Ensembl chr 3:56,969,101...56,992,731 		JBrowse link
stomach development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:29700203) MGI PMID:29700203 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 8:112,436,088...112,474,443 JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,261,448...2,661,840
Ensembl chr 1:2,261,845...2,661,863 		JBrowse link
stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:98,182,213...98,185,057
Ensembl chr11:98,182,787...98,183,506 		JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr15:88,220,093...88,222,563
Ensembl chr15:88,220,083...88,223,243 		JBrowse link
G NKX6-3 NK6 homeobox 3 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 8:39,620,972...39,627,298
Ensembl chr 8:39,620,990...39,625,052 		JBrowse link
visceral mesoderm-endoderm interaction involved in midgut development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXL1 forkhead box L1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:71,960,154...71,968,629
Ensembl chr 5:71,963,965...71,965,002 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19706
    multicellular organismal process 7576
      multicellular organism development 5240
        system development 4537
          digestive system development 192
            digestive tract development + 177
            exocrine pancreas development 10
Path 2
Term Annotations click to browse term
  biological_process 19706
    developmental process 6945
      anatomical structure development 6521
        multicellular organism development 5240
          system development 4537
            digestive system development 192
              digestive tract development + 177
              exocrine pancreas development 10
paths to the root