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ONTOLOGY REPORT - ANNOTATIONS


Term:zinc ion homeostasis
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Accession:GO:0055069 term browser browse the term
Definition:Any process involved in the maintenance of an internal steady state of zinc ions within an organism or cell.
Synonyms:broad_synonym: zinc homeostasis



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zinc ion homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:24334770)
(MGI:5780535|PMID:24334770)
RGD PMID:24334770 MGI:5780535 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Mt3 metallothionein 3 involved_in ISO
ISS
(PMID:18157556)
GO_REF:0000024
RGD
UniProt
PMID:18157556 GO_REF:0000024 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISS GO_REF:0000024 ParkinsonsUK-UCL GO_REF:0000024 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Slc30a4 solute carrier family 30 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856938 (MGI:50729|PMID:1588438)
Ensembl
RGD
PMID:1588438 GO_REF:0000107 MGI:50729 NCBI chr 3:109,753,270...109,775,306
Ensembl chr 3:109,753,273...109,775,306
JBrowse link
G Tmc8 transmembrane channel-like 8 involved_in ISO (PMID:18158319) RGD PMID:18158319 NCBI chr10:103,000,038...103,010,601
Ensembl chr10:102,998,402...103,010,590
JBrowse link
cellular zinc ion homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC128848.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (MGI:6415001|PMID:30786955) RGD PMID:30786955 MGI:6415001 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:24603074) RGD PMID:24603074 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Atp7b ATPase copper transporting beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856220 (MGI:1100407|PMID:9392450), (MGI:1196719|PMID:9484715), (MGI:64054|PMID:8257436), (MGI:66663|PMID:8040371)
Ensembl
RGD
PMID:8040371 PMID:8257436 PMID:9392450 PMID:9484715 GO_REF:0000107 MGI:1100407 MGI:1196719 MGI:64054 MGI:66663 NCBI chr16:69,952,286...70,024,404
Ensembl chr16:69,951,778...70,023,636
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (MGI:6415001|PMID:30786955) RGD PMID:30786955 MGI:6415001 NCBI chr 1:241,551,180...241,577,292
Ensembl chr 1:241,551,175...241,577,268
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO
IEA
(PMID:11739864)
GO_REF:0000107
RGD
Ensembl
PMID:11739864 GO_REF:0000107 NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794
JBrowse link
G Mt1 metallothionein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2668454 (MGI:2177111|PMID:11792622)
RGD PMID:11792622 PMID:21873635 MGI:2177111, RGD:13792537 NCBI chr19:10,826,032...10,827,048 JBrowse link
G Mt1m metallothionein 1M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,159,023...3,159,401
Ensembl chr 5:119,728,811...119,730,073
JBrowse link
G Mt2A metallothionein 2A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2668455 (MGI:2177111|PMID:11792622)
RGD PMID:11792622 PMID:21873635 MGI:2177111, RGD:13792537 NCBI chr19:10,832,009...10,832,783
Ensembl chr19:10,832,002...10,832,784
JBrowse link
G Mt3 metallothionein 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:4881636|PMID:20544854), (MGI:5299282|PMID:21726645), (MGI:5315330|PMID:21359432)
GO_REF:0000024
RGD
UniProt
PMID:20544854 PMID:21359432 PMID:21726645 PMID:21873635 GO_REF:0000024 MGI:4881636 MGI:5299282 MGI:5315330, RGD:13792537 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mt4 metallothionein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,863,813...10,865,909
Ensembl chr19:10,863,813...10,865,909
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within
ISO MGI:2655190 (MGI:4845788|PMID:21084597)
(MGI:6478087|PMID:22575539)
RGD PMID:21084597 PMID:22575539 MGI:4845788 MGI:6478087 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc30a1 solute carrier family 30 member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3056498 (MGI:3056220|PMID:15452870)
(MGI:4456947|PMID:15451416)
RGD PMID:15451416 PMID:15452870 PMID:21873635 MGI:3056220 MGI:4456947, RGD:13792537 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910
JBrowse link
G Slc30a10 solute carrier family 30, member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:96,998,143...97,048,076
Ensembl chr13:96,998,143...97,009,103
JBrowse link
G Slc30a5 solute carrier family 30 member 5 involved_in ISO (PMID:11937503) RGD PMID:11937503 NCBI chr 2:31,945,745...31,975,969
Ensembl chr 2:31,945,729...31,975,934
JBrowse link
G Slc30a8 solute carrier family 30 member 8 involved_in IMP
ISO
IEA
PMID:19479076
(MGI:4359332|PMID:19450229)
GO_REF:0000002
RGD
InterPro
PMID:19450229 PMID:19479076 GO_REF:0000002 MGI:4359332, RGD:2315022 NCBI chr 7:83,591,993...83,627,786
Ensembl chr 7:83,591,993...83,626,305
JBrowse link
G Slc30a9 solute carrier family 30 member 9 involved_in ISO (PMID:28334855) RGD PMID:28334855 NCBI chr14:40,816,284...40,870,992
Ensembl chr14:40,816,290...40,870,929
JBrowse link
G Slc39a10 solute carrier family 39 member 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5642301 (MGI:5586917|PMID:25074913)
RGD PMID:25074913 PMID:21873635 MGI:5586917, RGD:13792537 NCBI chr 9:54,836,841...54,960,325
Ensembl chr 9:54,876,141...54,960,325
JBrowse link
G Slc39a12 solute carrier family 39 member 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,353,761...77,440,381
Ensembl chr17:77,353,805...77,440,353
JBrowse link
G Slc39a13 solute carrier family 39 member 13 involved_in IBA
ISO
PMID:21873635
(MGI:3829328|PMID:18985159)
(PMID:21917916)
RGD PMID:18985159 PMID:21917916 PMID:21873635 MGI:3829328, RGD:13792537 NCBI chr 3:77,039,411...77,047,536
Ensembl chr 3:77,037,565...77,049,226
JBrowse link
G Slc39a14 solute carrier family 39 member 14 involved_in IBA
ISO
PMID:21873635
(MGI:4950776|PMID:21445361), (MGI:5812606|PMID:27703010)
(PMID:15642354), (PMID:21917916)
RGD PMID:15642354 PMID:21445361 PMID:21917916 PMID:27703010 PMID:21873635 MGI:4950776 MGI:5812606, RGD:13792537 NCBI chr15:45,376,806...45,423,549
Ensembl chr15:45,376,917...45,423,524
JBrowse link
G Slc39a4 solute carrier family 39 member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3028750|PMID:14612438)
RGD PMID:14612438 PMID:21873635 MGI:3028750, RGD:13792537 NCBI chr 7:108,333,380...108,337,553
Ensembl chr 7:108,333,381...108,337,553
JBrowse link
G Slc39a5 solute carrier family 39 member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
JBrowse link
G Slc39a6 solute carrier family 39 member 6 involved_in IBA
ISO
PMID:21873635
(PMID:15642354)
RGD PMID:15642354 PMID:21873635 RGD:13792537 NCBI chr18:15,864,874...15,885,417
Ensembl chr18:15,864,875...15,885,417
JBrowse link
G Slc39a7 solute carrier family 39 member 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,823,166...4,826,538
Ensembl chr20:4,822,012...4,826,537
JBrowse link
G Slc39a8 solute carrier family 39 member 8 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5577232|PMID:24529376)
GO_REF:0000024
(PMID:19401385)
RGD
UniProt
PMID:19401385 PMID:24529376 PMID:21873635 GO_REF:0000024 MGI:5577232, RGD:13792537 NCBI chr 2:224,171,787...224,319,326
Ensembl chr 2:224,256,654...224,319,129
JBrowse link
positive regulation of sequestering of zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a2 solute carrier family 30 member 2 involved_in ISO
IEA
(PMID:17349999)
GO_REF:0000107
RGD
Ensembl
PMID:17349999 GO_REF:0000107 NCBI chr 5:146,559,733...146,571,957
Ensembl chr 5:146,559,733...146,571,956
JBrowse link
regulation of sequestering of zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in ISO (PMID:17349999) RGD PMID:17349999 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Slc30a2 solute carrier family 30 member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,559,733...146,571,957
Ensembl chr 5:146,559,733...146,571,956
JBrowse link
G Slc30a3 solute carrier family 30 member 3 involved_in ISO
IBA
(PMID:17349999)
PMID:21873635
RGD PMID:17349999 PMID:21873635 RGD:13792537 NCBI chr 6:25,264,310...25,284,720
Ensembl chr 6:25,275,528...25,284,720
JBrowse link
G Slc30a4 solute carrier family 30 member 4 involved_in ISO
IEA
IBA
(PMID:17349999)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:17349999 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:109,753,270...109,775,306
Ensembl chr 3:109,753,273...109,775,306
JBrowse link
G Slc30a8 solute carrier family 30 member 8 involved_in IMP
IBA
PMID:19479076
PMID:21873635
BHF-UCL
GO_Central
PMID:19479076 PMID:21873635 RGD:2315022, RGD:13792537 NCBI chr 7:83,591,993...83,627,786
Ensembl chr 7:83,591,993...83,626,305
JBrowse link
sequestering of zinc ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a7 solute carrier family 30 member 7 acts_upstream_of_or_within ISO (PMID:17720550) RGD PMID:17720550 NCBI chr 2:203,855,484...203,922,155
Ensembl chr 2:203,859,175...203,922,132
JBrowse link
G Slc30a8 solute carrier family 30 member 8 involved_in ISO (PMID:15331542) RGD PMID:15331542 NCBI chr 7:83,591,993...83,627,786
Ensembl chr 7:83,591,993...83,626,305
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    biological regulation 13476
      regulation of biological quality 4152
        homeostatic process 1993
          chemical homeostasis 1358
            ion homeostasis 870
              cation homeostasis 811
                divalent inorganic cation homeostasis 573
                  zinc ion homeostasis 33
                    cellular zinc ion homeostasis + 31
Path 2
Term Annotations click to browse term
  biological_process 19390
    biological regulation 13476
      regulation of biological quality 4152
        homeostatic process 1993
          chemical homeostasis 1358
            ion homeostasis 870
              cation homeostasis 811
                metal ion homeostasis 739
                  transition metal ion homeostasis 149
                    zinc ion homeostasis 33
                      cellular zinc ion homeostasis + 31
paths to the root