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ONTOLOGY REPORT - ANNOTATIONS


Term:cardiac muscle cell development
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Accession:GO:0055013 term browser browse the term
Definition:The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state.
Synonyms:exact_synonym: cardiac muscle fiber development;   cardiac muscle fibre development;   cardiomyocyte cell development;   heart muscle cell development
 related_synonym: heart muscle fiber development
 alt_id: GO:0048739



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cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN2 actinin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,686,499...236,764,631
Ensembl chr 1:236,664,141...236,764,631
JBrowse link
G ALPK2 alpha kinase 2 involved_in IMP (PMID:29888752) UniProt PMID:29888752 NCBI chr18:58,481,247...58,629,091
Ensembl chr18:58,481,247...58,629,091
JBrowse link
G ALPK3 alpha kinase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5644402|PMID:21441111)
GO_Central
MGI
PMID:21441111 PMID:21873635 MGI:5644402 NCBI chr15:84,817,356...84,873,479
Ensembl chr15:84,817,356...84,873,479
JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:93,934,160...93,976,739
Ensembl chr14:93,934,166...93,976,739
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:3711608|PMID:17450150) MGI PMID:17450150 MGI:3711608 NCBI chr 3:11,272,348...11,564,652
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
G CAV3 caveolin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849772|PMID:19535499) Ensembl
MGI
PMID:19535499 GO_REF:0000107 MGI:3849772 NCBI chr 3:8,733,802...8,746,758
Ensembl chr 3:8,733,802...8,841,808
JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3587448|PMID:16079292) MGI
UniProt
PMID:16079292 GO_REF:0000024 MGI:3587448 NCBI chr21:17,513,016...17,636,213
Ensembl chr21:17,513,043...17,593,579
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3774881|PMID:18256189) MGI PMID:18256189 MGI:3774881 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5648096|PMID:26039991) Ensembl
MGI
PMID:26039991 GO_REF:0000107 MGI:5648096 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G LRRC10 leucine rich repeat containing 10 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5484795|PMID:23236519)
GO_Central
MGI
PMID:21873635 PMID:23236519 MGI:5484795 NCBI chr12:69,608,564...69,610,907
Ensembl chr12:69,608,564...69,610,907
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:5529574|PMID:23994610) MGI PMID:23994610 MGI:5529574 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MIR208A microRNA 208a acts_upstream_of_or_within ISO (MGI:3708230|PMID:17379774) MGI PMID:17379774 MGI:3708230 NCBI chr14:23,388,596...23,388,666
Ensembl chr14:23,388,596...23,388,666
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5632243|PMID:25139234) Ensembl
MGI
PMID:25139234 GO_REF:0000107 MGI:5632243 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G MYH11 myosin heavy chain 11 involved_in IMP (PMID:16444274) UniProt PMID:16444274 NCBI chr16:15,703,135...15,857,032
Ensembl chr16:15,703,135...15,857,028
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:83539|PMID:8878443)
(MGI:3526615|PMID:15001446)
(MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683)
MGI
BHF-UCL
PMID:8878443 PMID:9884344 PMID:10066683 PMID:15001446 GO_REF:0000024 MGI:1327483 MGI:1333559 MGI:3526615 MGI:83539 NCBI chr14:23,381,987...23,408,273
Ensembl chr14:23,381,982...23,408,273
JBrowse link
G MYO18B myosin XVIIIB acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821523|PMID:18761673) MGI
Ensembl
PMID:18761673 GO_REF:0000107 MGI:3821523 NCBI chr22:25,742,133...26,063,847
Ensembl chr22:25,742,144...26,031,045
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:173,232,109...173,235,321
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:143,915,153...143,976,800
Ensembl chr 8:143,915,153...143,976,734
JBrowse link
G SGCB sarcoglycan beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1352919|PMID:10678176) Ensembl
MGI
PMID:10678176 GO_REF:0000107 MGI:1352919 NCBI chr 4:52,020,706...52,038,299
Ensembl chr 4:52,020,706...52,038,299
JBrowse link
G SGCD sarcoglycan delta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5790783|PMID:23695275) MGI
Ensembl
PMID:23695275 GO_REF:0000107 MGI:5790783 NCBI chr 5:155,728,636...156,767,788
Ensembl chr 5:155,870,344...156,767,788
JBrowse link
G SLC8A1 solute carrier family 8 member A1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:4867054|PMID:21302256) BHF-UCL
MGI
PMID:21302256 GO_REF:0000024 MGI:4867054 NCBI chr 2:40,097,270...40,512,435
Ensembl chr 2:40,097,270...40,611,053
JBrowse link
G SPEG striated muscle enriched protein kinase acts_upstream_of_or_within ISO (MGI:4830240|PMID:19118250) MGI PMID:19118250 MGI:4830240 NCBI chr 2:219,434,215...219,493,629
Ensembl chr 2:219,434,843...219,493,629
JBrowse link
G TCAP titin-cap involved_in IMP (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr17:39,665,349...39,666,554
Ensembl chr17:39,665,349...39,666,554
JBrowse link
G TTN titin involved_in IMP (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr 2:178,525,989...178,807,423
Ensembl chr 2:178,525,989...178,830,802
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:1339868|PMID:10229225) MGI
BHF-UCL
PMID:10229225 GO_REF:0000024 MGI:1339868 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G XIRP1 xin actin binding repeat containing 1 acts_upstream_of_or_within ISO (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chr 3:39,183,214...39,192,621
Ensembl chr 3:39,183,210...39,192,596
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178865|PMID:11923874) MGI
Ensembl
PMID:11923874 GO_REF:0000107 MGI:2178865 NCBI chr 1:40,258,078...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
atrial cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHL2 four and a half LIM domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15509787) Ensembl
BHF-UCL
PMID:15509787 GO_REF:0000107 NCBI chr 2:105,357,712...105,438,529
Ensembl chr 2:105,357,712...105,438,513
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in ISS (PMID:8900537) BHF-UCL PMID:8900537 NCBI chr 5:173,232,109...173,235,321
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:9621431) BHF-UCL
BHF-UCL
PMID:9621431 GO_REF:0000024 NCBI chr 8:23,701,740...23,706,756
Ensembl chr 8:23,701,740...23,706,756
JBrowse link
atrioventricular node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr10:86,755,786...86,927,969
Ensembl chr10:86,756,601...86,932,825
JBrowse link
G MAML1 mastermind like transcriptional coactivator 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:179,732,822...179,777,283
Ensembl chr 5:179,732,822...179,777,283
JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355491|PMID:19546853) MGI
Ensembl
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr 5:173,232,109...173,235,321
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G TBX5 T-box transcription factor 5 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr12:114,353,911...114,408,708
Ensembl chr12:114,353,911...114,408,442
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEB nebulin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:151,485,334...151,734,476
Ensembl chr 2:151,485,336...151,734,487
JBrowse link
G NEBL nebulette involved_in IBA
IMP
(PMID:21873635)
(PMID:11822876), (PMID:18823973)
GO_Central
UniProt
PMID:11822876 PMID:18823973 PMID:21873635 NCBI chr10:20,779,973...21,293,050
Ensembl chr10:20,779,973...21,293,011
JBrowse link
G NRAP nebulin related anchoring protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:113,588,714...113,664,046
Ensembl chr10:113,588,714...113,664,070
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:87509|PMID:9114002) UniProt
MGI
PMID:9114002 GO_REF:0000024 MGI:87509 NCBI chr15:34,790,230...34,795,549
Ensembl chr15:34,790,230...34,795,549
JBrowse link
G ADPRHL1 ADP-ribosylhydrolase like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:113,399,607...113,453,488
Ensembl chr13:113,399,610...113,453,524
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in ISS (PMID:12507422) BHF-UCL PMID:12507422 NCBI chr11:19,182,030...19,201,983
Ensembl chr11:19,182,030...19,210,571
JBrowse link
G FHOD3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5436289|PMID:23213483)
GO_Central
MGI
PMID:21873635 PMID:23213483 MGI:5436289 NCBI chr18:36,297,713...36,780,220
Ensembl chr18:36,297,714...36,780,055
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1099556|PMID:9356462) MGI PMID:9356462 MGI:1099556 NCBI chr17:8,474,212...8,631,369
Ensembl chr17:8,474,207...8,630,761
JBrowse link
G MYL2 myosin light chain 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1194431|PMID:9422794) BHF-UCL
MGI
PMID:9422794 GO_REF:0000024 MGI:1194431 NCBI chr12:110,910,845...110,920,579
Ensembl chr12:110,910,819...110,921,443
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in ISS
IBA
(PMID:21873635) BHF-UCL
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr16:46,702,282...46,763,246
Ensembl chr16:46,702,282...46,790,407
JBrowse link
G OBSL1 obscurin like cytoskeletal adaptor 1 involved_in NAS (PMID:17289344) BHF-UCL PMID:17289344 NCBI chr 2:219,549,408...219,571,573
Ensembl chr 2:219,550,728...219,571,859
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:54,229,127...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513738|PMID:15569937) Ensembl
MGI
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G TCAP titin-cap involved_in IBA
IMP
(PMID:21873635)
(PMID:9817758)
GO_Central
BHF-UCL
PMID:9817758 PMID:21873635 NCBI chr17:39,665,349...39,666,554
Ensembl chr17:39,665,349...39,666,554
JBrowse link
G TTN titin involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:11846417), (PMID:9817758)
(MGI:3653555|PMID:16702235)
BHF-UCL
MGI
PMID:9817758 PMID:11846417 PMID:16702235 MGI:3653555 NCBI chr 2:178,525,989...178,807,423
Ensembl chr 2:178,525,989...178,830,802
JBrowse link
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1A adrenoceptor alpha 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2664013|PMID:12782680) Ensembl
MGI
PMID:12782680 GO_REF:0000107 MGI:2664013 NCBI chr 8:26,738,113...26,870,994
Ensembl chr 8:26,748,150...26,867,278
JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:2664013|PMID:12782680) MGI PMID:12782680 MGI:2664013 NCBI chr 5:159,916,482...159,989,205
Ensembl chr 5:159,865,080...159,973,012
JBrowse link
G AGT angiotensinogen involved_in ISO
IEA
RGD
Ensembl
PMID:21376054 GO_REF:0000107 RGD:5129173 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:21173078 RGD:6903878 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G AKAP13 A-kinase anchoring protein 13 involved_in IEA
ISO
Ensembl
RGD
PMID:18951085 GO_REF:0000107 RGD:2312638 NCBI chr15:85,380,603...85,749,358
Ensembl chr15:85,380,571...85,749,358
JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:21554860 RGD:6907064 NCBI chr 4:113,451,032...113,762,177
Ensembl chr 4:113,418,054...113,761,927
JBrowse link
G GATA4 GATA binding protein 4 involved_in IEA
ISO
Ensembl
RGD
PMID:20971938 GO_REF:0000107 RGD:5131529 NCBI chr 8:11,676,935...11,760,002
Ensembl chr 8:11,676,959...11,760,002
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:27854077 RGD:13792737 NCBI chr 3:119,821,321...120,095,823
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:9769323 RGD:7495831 NCBI chr17:12,020,822...12,143,828
Ensembl chr17:12,020,829...12,143,830
JBrowse link
G MYL2 myosin light chain 2 ISO RGD PMID:7657802 RGD:1580138 NCBI chr12:110,910,845...110,920,579
Ensembl chr12:110,910,819...110,921,443
JBrowse link
G MYOCD myocardin ISO RGD PMID:18772130 RGD:5132877 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G NPPA natriuretic peptide A ISO RGD PMID:7657802 RGD:1580138 NCBI chr 1:11,845,709...11,847,783
Ensembl chr 1:11,845,709...11,848,345
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:7657802 RGD:1580138 NCBI chr 1:11,857,464...11,858,945
Ensembl chr 1:11,857,464...11,858,945
JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:94,451,942...94,668,223
Ensembl chr 4:94,451,857...94,668,227
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:19542178 RGD:7775063 NCBI chr10:50,990,888...52,298,350
Ensembl chr10:50,990,888...52,298,423
JBrowse link
G SORBS2 sorbin and SH3 domain containing 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:185,585,523...185,956,372
Ensembl chr 4:185,585,444...185,956,652
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD4 SMAD family member 4 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 involved_in IEA
ISO
Ensembl
RGD
PMID:21170593 GO_REF:0000107 RGD:6784534 NCBI chr 3:8,733,802...8,746,758
Ensembl chr 3:8,733,802...8,841,808
JBrowse link
G CTDP1 CTD phosphatase subunit 1 involved_in IEA
ISO
Ensembl
RGD
PMID:22569295 GO_REF:0000107 RGD:9686371 NCBI chr18:79,679,803...79,756,625
Ensembl chr18:79,679,803...79,754,503
JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:26333362 RGD:11561912 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,708...71,583,989
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in IEA
ISO
Ensembl
RGD
PMID:24190878 GO_REF:0000107 RGD:10449133 NCBI chr  X:154,531,390...154,547,569
Ensembl chr  X:154,531,391...154,547,572
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr19:42,230,186...42,243,330
Ensembl chr19:42,226,225...42,242,625
JBrowse link
G MIR451A microRNA 451a ISO RGD PMID:25209900 RGD:11558015 NCBI chr17:28,861,369...28,861,440
Ensembl chr17:28,861,369...28,861,440
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:22082674 RGD:11533929 NCBI chr11:77,322,017...77,514,957
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PI16 peptidase inhibitor 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3810223|PMID:17909105) Ensembl
MGI
PMID:17909105 GO_REF:0000107 MGI:3810223 NCBI chr 6:36,948,296...36,964,837
Ensembl chr 6:36,948,263...36,964,837
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA
ISO
Ensembl
RGD
PMID:22198280 GO_REF:0000107 RGD:5687133 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,756
JBrowse link
G RGS2 regulator of G protein signaling 2 involved_in IEA
ISO
Ensembl
RGD
PMID:16380388 GO_REF:0000107 RGD:13524577 NCBI chr 1:192,809,039...192,812,275
Ensembl chr 1:192,809,039...192,812,275
JBrowse link
G RGS4 regulator of G protein signaling 4 involved_in IEA
ISO
Ensembl
RGD
PMID:9918533 GO_REF:0000107 RGD:7207376 NCBI chr 1:163,068,871...163,076,802
Ensembl chr 1:163,068,775...163,076,802
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 involved_in ISO
IEA
RGD
Ensembl
PMID:25022898 GO_REF:0000107 RGD:13464131 NCBI chr 3:100,363,431...100,401,089
Ensembl chr 3:100,363,431...100,401,089
JBrowse link
G YY1 YY1 transcription factor involved_in IEA
ISO
Ensembl
RGD
PMID:18632988 GO_REF:0000107 RGD:9588273 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788
JBrowse link
G ZNF416 zinc finger protein 416 acts_upstream_of_or_within ISO (MGI:5920524|PMID:29065170) MGI PMID:29065170 MGI:5920524 NCBI chr19:57,571,015...57,578,911
Ensembl chr19:57,571,566...57,578,911
JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IMP (PMID:20702560) BHF-UCL PMID:20702560 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:18194989 RGD:5129139 NCBI chr10:114,043,866...114,046,904
Ensembl chr10:114,043,866...114,046,904
JBrowse link
G AKAP6 A-kinase anchoring protein 6 involved_in ISS
ISO
BHF-UCL
RGD
PMID:16306226 PMID:21550986 GO_REF:0000024 RGD:2312613 RGD:6902940 NCBI chr14:32,203,610...32,837,684
Ensembl chr14:32,329,298...32,837,684
JBrowse link
G CCN4 cellular communication network factor 4 ISO RGD PMID:21376054 RGD:5129173 NCBI chr 8:133,190,907...133,231,690
Ensembl chr 8:133,191,039...133,231,690
JBrowse link
G DDX39B DExD-box helicase 39B ISO RGD PMID:20116367 RGD:10401141 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448
JBrowse link
G EDN1 endothelin 1 involved_in IDA
IGI
(PMID:24117217) BHF-UCL PMID:24117217 NCBI chr 6:12,256,463...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:12724418 RGD:2312280 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077
JBrowse link
G FDPS farnesyl diphosphate synthase ISO RGD PMID:19716825 RGD:2316294 NCBI chr 1:155,308,801...155,320,665
Ensembl chr 1:155,308,748...155,320,666
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in IEA
ISO
Ensembl
RGD
PMID:24424338 GO_REF:0000107 RGD:11041632 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143
JBrowse link
G IGF1 insulin like growth factor 1 involved_in IDA
IGI
(PMID:24117217) BHF-UCL PMID:24117217 NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21318349 PMID:21933187 RGD:10040977 RGD:10040978 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:22989630 RGD:7174736 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA
ISO
Ensembl
RGD
PMID:23261455 GO_REF:0000107 RGD:13514044 NCBI chr14:20,343,041...20,357,904
Ensembl chr14:20,343,615...20,357,904
JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:23487407 RGD:8693424 NCBI chr19:9,835,318...9,849,689
Ensembl chr19:9,835,257...9,849,689
JBrowse link
G SIRT1 sirtuin 1 ISO RGD PMID:25281201 RGD:13514043 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO RGD PMID:21325829 RGD:9681466 NCBI chr 4:185,143,266...185,150,382
Ensembl chr 4:185,143,266...185,150,382
JBrowse link
G TRIP10 thyroid hormone receptor interactor 10 ISO RGD PMID:23915320 RGD:11535145 NCBI chr19:6,739,680...6,751,530
Ensembl chr19:6,737,925...6,751,530
JBrowse link
regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL14A1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO (MGI:5444801|PMID:22906538) MGI PMID:22906538 MGI:5444801 NCBI chr 8:120,124,467...120,373,573
Ensembl chr 8:120,059,780...120,373,573
JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BVES blood vessel epicardial substance involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5424322|PMID:22354168) Ensembl
MGI
PMID:22354168 GO_REF:0000107 MGI:5424322 NCBI chr 6:105,096,822...105,137,157
Ensembl chr 6:105,096,822...105,137,157
JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730
JBrowse link
G POPDC2 popeye domain containing 2 acts_upstream_of_or_within ISO (MGI:5424322|PMID:22354168) MGI PMID:22354168 MGI:5424322 NCBI chr 3:119,642,056...119,660,589
Ensembl chr 3:119,636,457...119,665,324
JBrowse link
G SHOX2 short stature homeobox 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:158,095,905...158,106,420
Ensembl chr 3:158,095,905...158,106,420
JBrowse link
G TBX18 T-box transcription factor 18 involved_in IMP (PMID:23242162) BHF-UCL PMID:23242162 NCBI chr 6:84,732,496...84,764,598
Ensembl chr 6:84,687,351...84,764,598
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IDA
ISO
(PMID:22130515)
(MGI:4366226|PMID:19096026)
BHF-UCL
MGI
PMID:19096026 PMID:22130515 MGI:4366226 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3711608|PMID:17450150) Ensembl
MGI
PMID:17450150 GO_REF:0000107 MGI:3711608 NCBI chr 6:106,184,476...106,325,789
Ensembl chr 6:106,045,423...106,325,791
JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in ISS (PMID:10072785) BHF-UCL PMID:10072785 NCBI chr 2:68,860,909...68,871,397
Ensembl chr 2:68,860,909...68,871,397
JBrowse link
G CCNB1 cyclin B1 ISO RGD PMID:15253691 RGD:2301353 NCBI chr 5:69,167,150...69,178,245
Ensembl chr 5:69,167,135...69,178,245
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:15253691 GO_REF:0000107 RGD:2301353 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G FHL2 four and a half LIM domains 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15509787) Ensembl
BHF-UCL
PMID:15509787 GO_REF:0000107 NCBI chr 2:105,357,712...105,438,529
Ensembl chr 2:105,357,712...105,438,513
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:125,747,639...125,762,243
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G LMNA lamin A/C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3027329|PMID:14755333) MGI
Ensembl
PMID:14755333 GO_REF:0000107 MGI:3027329 NCBI chr 1:156,082,573...156,140,081
Ensembl chr 1:156,082,573...156,140,081
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:3052228|PMID:12893741) MGI PMID:12893741 MGI:3052228 NCBI chr17:8,474,212...8,631,369
Ensembl chr17:8,474,207...8,630,761
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in ISS (PMID:8900537) BHF-UCL PMID:8900537 NCBI chr 5:173,232,109...173,235,321
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:9621431) BHF-UCL
BHF-UCL
PMID:9621431 GO_REF:0000024 NCBI chr 8:23,701,740...23,706,756
Ensembl chr 8:23,701,740...23,706,756
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3841866|PMID:18292603) MGI PMID:18292603 MGI:3841866 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEF2A myocyte enhancer factor 2A involved_in ISS UniProt GO_REF:0000024 NCBI chr15:99,565,417...99,716,488
Ensembl chr15:99,565,417...99,716,466
JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355491|PMID:19546853) MGI
Ensembl
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr 5:173,232,109...173,235,321
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G PROX1 prospero homeobox 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18605
    developmental process 7311
      anatomical structure development 6638
        cell development 2532
          cardiac cell development 113
            cardiac muscle cell development 108
              atrial cardiac muscle cell development + 3
              cardiac myofibril assembly + 20
              cardiac pacemaker cell development + 10
              cell growth involved in cardiac muscle cell development + 47
              negative regulation of cardiac muscle fiber development 0
              positive regulation of cardiac muscle fiber development 1
              regulation of cardiac muscle fiber development + 1
              ventricular cardiac muscle cell development + 13
Path 2
Term Annotations click to browse term
  biological_process 18605
    developmental process 7311
      anatomical structure development 6638
        multicellular organism development 6007
          system development 5654
            animal organ development 4308
              heart development 725
                cardiocyte differentiation 192
                  cardiac muscle cell differentiation 152
                    cardiac muscle cell development 108
                      atrial cardiac muscle cell development + 3
                      cardiac myofibril assembly + 20
                      cardiac pacemaker cell development + 10
                      cell growth involved in cardiac muscle cell development + 47
                      negative regulation of cardiac muscle fiber development 0
                      positive regulation of cardiac muscle fiber development 1
                      regulation of cardiac muscle fiber development + 1
                      ventricular cardiac muscle cell development + 13
paths to the root