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ONTOLOGY REPORT - ANNOTATIONS


Term:ventricular cardiac muscle cell differentiation
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Accession:GO:0055012 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a ventricular cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood out of the organ.
Synonyms:exact_synonym: ventricular cardiomyocyte differentiation;   ventricular heart muscle cell differentiation


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ventricular cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3830899|PMID:16680724)
UniProt
RGD
PMID:16680724 GO_REF:0000024 MGI:3830899 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3052940 (MGI:4941650|PMID:21357509)
Ensembl
RGD
PMID:21357509 GO_REF:0000107 MGI:4941650 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:9553078) RGD PMID:9553078 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:1857622 (MGI:1101382|PMID:9428411) RGD PMID:9428411 MGI:1101382 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:1857851 (MGI:1101382|PMID:9428411) RGD PMID:9428411 MGI:1101382 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:2136274|MGI:98215 (MGI:1101382|PMID:9428411) RGD PMID:9428411 MGI:1101382 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Rxrb retinoid X receptor beta acts_upstream_of_or_within ISO MGI:1857822|MGI:98214 (MGI:1101382|PMID:9428411) RGD PMID:9428411 MGI:1101382 NCBI chr20:3,822,673...3,829,138
Ensembl chr20:3,823,042...3,829,140
JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3050453|MGI:3663625 (MGI:3711608|PMID:17450150)
Ensembl
RGD
PMID:17450150 GO_REF:0000107 MGI:3711608 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA
ISO
GO_REF:0000107
(MGI:3695247|PMID:16798733)
Ensembl
RGD
PMID:16798733 GO_REF:0000107 MGI:3695247 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Fhl2 four and a half LIM domains 2 acts_upstream_of_or_within ISO (PMID:15509787) RGD PMID:15509787 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO (MGI:3784153|PMID:17332425) RGD PMID:17332425 MGI:3784153 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Lmna lamin A/C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177930 (MGI:3027329|PMID:14755333)
Ensembl
RGD
PMID:14755333 GO_REF:0000107 MGI:3027329 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445|MGI:3052104 (MGI:3052228|PMID:12893741) RGD PMID:12893741 MGI:3052228 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Nkx2-6 NK2 homeobox 6 acts_upstream_of_or_within ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:2386742 (MGI:3841866|PMID:18292603) RGD PMID:18292603 MGI:3841866 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a involved_in IEA
ISO
GO_REF:0000107
(MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107 MGI:2429350 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)
Ensembl
RGD
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      cellular developmental process 4470
        cell differentiation 4375
          cardiocyte differentiation 185
            cardiac muscle cell differentiation 150
              ventricular cardiac muscle cell differentiation 20
                ventricular cardiac muscle cell development + 13
                ventricular cardiac muscle cell fate commitment 0
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure development 6192
        multicellular organism development 5629
          system development 5301
            animal organ development 4060
              heart development 695
                cardiac muscle tissue development 260
                  cardiac muscle cell differentiation 150
                    ventricular cardiac muscle cell differentiation 20
                      ventricular cardiac muscle cell development + 13
                      ventricular cardiac muscle cell fate commitment 0
paths to the root