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ONTOLOGY REPORT - ANNOTATIONS


Term:striated muscle cell development
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Accession:GO:0055002 term browser browse the term
Definition:The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.



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striated muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin acts_upstream_of_or_within ISO (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5461237|PMID:23222475)
(MGI:5515277|PMID:23798567)
MGI PMID:23222475 PMID:23798567 MGI:5461237 MGI:5515277 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787
JBrowse link
G SDC1 syndecan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,220,906...15,243,974
Ensembl chr17:15,222,094...15,243,890
JBrowse link
G TTN titin acts_upstream_of_or_within ISO (MGI:3604932|PMID:16115818) MGI PMID:16115818 MGI:3604932 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEB nebulin involved_in IEA TreeGrafter GO_REF:0000118
G NEBL nebulette involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 2:11,892,132...12,234,421
Ensembl chr 2:11,858,209...12,229,718
JBrowse link
G NRAP nebulin related anchoring protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:24,522,285...24,592,267
Ensembl chr28:24,522,362...24,592,192
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
Ensembl
PMID:9114002 GO_REF:0000107 MGI:87509 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738
JBrowse link
G FHOD3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436289|PMID:23213483) MGI
TreeGrafter
PMID:23213483 GO_REF:0000118 MGI:5436289 NCBI chr 7:53,477,273...53,933,532
Ensembl chr 7:53,478,930...53,934,331
JBrowse link
G MOCOS molybdenum cofactor sulfurase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:53,950,561...54,002,046
Ensembl chr 7:53,945,436...54,002,252
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1099556|PMID:9356462) MGI PMID:9356462 MGI:1099556 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G MYL2 myosin light chain 2 acts_upstream_of_or_within ISO (MGI:1194431|PMID:9422794) MGI PMID:9422794 MGI:1194431 NCBI chr26:8,624,147...8,632,166
Ensembl chr26:8,464,176...8,632,232
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
G SRF serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513738|PMID:15569937) MGI
Ensembl
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in
acts_upstream_of_or_within
ISO (PMID:11846417), (PMID:9817758)
(MGI:3653555|PMID:16702235)
BHF-UCL
MGI
PMID:9817758 PMID:11846417 PMID:16702235 MGI:3653555 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASB15 ankyrin repeat and SOCS box containing 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:11,931,538...11,995,790
Ensembl chr14:11,919,034...11,989,939
JBrowse link
G CAPN3 calpain 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046122|PMID:15138196) MGI
Ensembl
PMID:15138196 GO_REF:0000107 MGI:3046122 NCBI chr30:9,329,190...9,384,622
Ensembl chr30:9,329,015...9,383,772
JBrowse link
G FLII FLII actin remodeling protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:41,303,015...41,314,849
Ensembl chr 5:41,302,767...41,314,862
JBrowse link
G KLHL41 kelch like family member 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:14,235,845...14,251,621
Ensembl chr36:14,235,941...14,251,083
JBrowse link
G LMOD1 leiomodin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:1,025,022...1,059,254 JBrowse link
G LMOD2 leiomodin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:11,916,842...11,924,616
Ensembl chr14:11,917,878...11,924,438
JBrowse link
G LMOD3 leiomodin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1354135|PMID:10712438) MGI PMID:10712438 MGI:1354135 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within ISO (MGI:83539|PMID:8878443)
(MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683)
MGI PMID:8878443 PMID:9884344 PMID:10066683 MGI:1327483 MGI:1333559 MGI:83539
G MYL9 myosin light chain 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:25,322,800...25,329,937
Ensembl chr24:25,322,800...25,329,932
JBrowse link
G NEURL2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr24:33,179,455...33,182,950
Ensembl chr24:33,180,731...33,182,714
JBrowse link
G PGM5 phosphoglucomutase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:88,823,883...89,011,091
Ensembl chr 1:88,825,152...88,994,750
JBrowse link
G TMOD1 tropomodulin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2683807|PMID:14657235) MGI
TreeGrafter
Ensembl
PMID:14657235 GO_REF:0000107 GO_REF:0000118 MGI:2683807 NCBI chr11:54,853,205...54,914,236
Ensembl chr11:54,853,204...54,912,773
JBrowse link
G TMOD2 tropomodulin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:17,425,216...17,501,484
Ensembl chr30:17,455,987...17,592,580
JBrowse link
G TMOD3 tropomodulin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr30:17,509,533...17,594,355
Ensembl chr30:17,455,987...17,592,580
JBrowse link
G TMOD4 tropomodulin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:60,234,061...60,238,950
Ensembl chr17:60,234,096...60,238,864
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:24777478 RGD:13204833 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,717,047...67,724,778
Ensembl chr10:67,717,980...67,724,739
JBrowse link
G EDN1 endothelin 1 involved_in ISO (PMID:12847114) BHF-UCL PMID:12847114 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G PRKD1 protein kinase D1 ISO RGD PMID:16648482 RGD:243065275 NCBI chr 8:9,004,641...9,327,054
Ensembl chr 8:9,005,115...9,328,358
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO RGD PMID:12724418 RGD:2312280 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP13 A-kinase anchoring protein 13 involved_in ISO (MGI:5308772|PMID:20139090) UniProt PMID:20139090 MGI:5308772 NCBI chr 3:49,076,313...49,310,564
Ensembl chr 3:49,076,642...49,308,221
JBrowse link
G ANKRD23 ankyrin repeat domain 23 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3760007|PMID:17392382) MGI
Ensembl
PMID:17392382 GO_REF:0000107 MGI:3760007 NCBI chr10:45,128,411...45,134,234
Ensembl chr10:45,117,903...45,132,817
JBrowse link
G ANKRD39 ankyrin repeat domain 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,117,875...45,126,556
Ensembl chr10:45,117,903...45,132,817
JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578
JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3768576|PMID:17875930) MGI PMID:17875930 MGI:3768576 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 acts_upstream_of_or_within ISO (MGI:3053481|PMID:15194427) MGI PMID:15194427 MGI:3053481 NCBI chr 9:635,978...638,328
Ensembl chr 9:635,978...638,328
JBrowse link
G ACTN2 actinin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:3,348,529...3,415,275
Ensembl chr 4:3,348,449...3,415,273
JBrowse link
G AP1G2 adaptor related protein complex 1 subunit gamma 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:3,785,085...3,793,081
Ensembl chr 8:3,629,585...3,792,725
JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in ISO PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chr10:67,717,047...67,724,778
Ensembl chr10:67,717,980...67,724,739
JBrowse link
G CAPN3 calpain 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046122|PMID:15138196) MGI
Ensembl
PMID:15138196 GO_REF:0000107 MGI:3046122 NCBI chr30:9,329,190...9,384,622
Ensembl chr30:9,329,015...9,383,772
JBrowse link
G CASQ1 calsequestrin 1 involved_in ISO (MGI:5306707|PMID:22049211) UniProt PMID:22049211 MGI:5306707 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383
JBrowse link
G CASQ2 calsequestrin 2 involved_in ISO (MGI:4453101|PMID:19920148) UniProt PMID:19920148 MGI:4453101 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708
JBrowse link
G CFL2 cofilin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5316079|PMID:22343409) Ensembl
MGI
PMID:22343409 GO_REF:0000107 MGI:5316079 NCBI chr 8:13,578,152...13,582,408
Ensembl chr 8:13,580,360...13,582,442
JBrowse link
G CSRP1 cysteine and glycine rich protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:1,400,650...1,421,918
Ensembl chr 7:1,397,912...1,421,007
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738
JBrowse link
G FHOD3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4422153|PMID:19706596) MGI
TreeGrafter
PMID:19706596 GO_REF:0000118 MGI:4422153 RGD:8554207 NCBI chr 7:53,477,273...53,933,532
Ensembl chr 7:53,478,930...53,934,331
JBrowse link
G FLNC filamin C involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,792,708...7,819,723
Ensembl chr14:7,793,449...7,819,940
JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84974|PMID:9004034) MGI
Ensembl
PMID:9004034 GO_REF:0000107 MGI:84974 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961
JBrowse link
G KRT19 keratin 19 involved_in ISO (PMID:16000376) UniProt PMID:16000376 NCBI chr 9:21,240,778...21,245,039 JBrowse link
G KRT8 keratin 8 involved_in ISO PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chr27:2,221,608...2,229,343 JBrowse link
G LAD1 ladinin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:1,623,839...1,639,314
Ensembl chr 7:1,624,056...1,641,104
JBrowse link
G LDB3 LIM domain binding 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153618|PMID:11696561) MGI
Ensembl
PMID:11696561 GO_REF:0000107 MGI:2153618 NCBI chr 4:34,367,155...34,421,992
Ensembl chr 4:34,364,025...34,421,509
JBrowse link
G LMOD2 leiomodin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,916,842...11,924,616
Ensembl chr14:11,917,878...11,924,438
JBrowse link
G MOCOS molybdenum cofactor sulfurase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:53,950,561...54,002,046
Ensembl chr 7:53,945,436...54,002,252
JBrowse link
G MYBPC3 myosin binding protein C3 acts_upstream_of_or_within ISO (MGI:3616388|PMID:16380103)
(MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063)
MGI PMID:16224063 PMID:16380103 PMID:17075052 MGI:3616388 MGI:3695637 MGI:3696622 NCBI chr18:42,271,159...42,288,782
Ensembl chr18:42,271,724...42,289,215
JBrowse link
G MYH16 myosin heavy chain 16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,257,815...10,321,643 JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:83539|PMID:8878443) MGI
TreeGrafter
PMID:8878443 GO_REF:0000118 MGI:83539
G MYH7 myosin heavy chain 7 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:3,660,155...3,677,650
Ensembl chr 8:3,629,585...3,792,725
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G MYOM2 myomesin 2 involved_in ISO (PMID:33033063) FlyBase PMID:33033063 NCBI chr16:54,379,342...54,392,955 JBrowse link
G MYOZ1 myozenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:24,158,532...24,165,416
Ensembl chr 4:24,158,720...24,165,392
JBrowse link
G MYOZ2 myozenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:38,088,505...38,132,265
Ensembl chr32:38,088,527...38,132,285
JBrowse link
G MYPN myopalladin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,364,146...19,468,827
Ensembl chr 4:19,381,416...19,465,995
JBrowse link
G NEURL2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr24:33,179,455...33,182,950
Ensembl chr24:33,180,731...33,182,714
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PPP6R1 protein phosphatase 6 regulatory subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:102,406,257...102,427,429
Ensembl chr 1:102,406,524...102,426,755
JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821563|PMID:18316483) MGI
Ensembl
PMID:18316483 GO_REF:0000107 MGI:3821563 NCBI chr 9:15,180,940...15,203,035
Ensembl chr 9:15,181,393...15,200,683
JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
G SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:39,936,851...40,163,249
Ensembl chr 5:39,940,165...40,137,627
JBrowse link
G SRF serum response factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513738|PMID:15569937) MGI
Ensembl
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G SYNPO2L synaptopodin 2 like involved_in ISO (MGI:6102963|PMID:29206857) BHF-UCL PMID:29206857 MGI:6102963 NCBI chr 4:24,168,030...24,177,710
Ensembl chr 4:24,169,707...24,177,813
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TNNT1 troponin T1, slow skeletal type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:102,479,617...102,490,776
Ensembl chr 1:102,366,801...102,491,147
JBrowse link
G TNNT2 troponin T2, cardiac type acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1342889|PMID:10449439) MGI
TreeGrafter
PMID:10449439 GO_REF:0000118 MGI:1342889 NCBI chr 7:1,598,306...1,620,531
Ensembl chr 7:1,598,306...1,613,741
JBrowse link
G TNNT3 troponin T3, fast skeletal type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:46,131,925...46,148,577
Ensembl chr18:46,074,700...46,149,131
JBrowse link
G TPM1 tropomyosin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:27,636,407...27,664,907
Ensembl chr30:27,636,283...27,664,442
JBrowse link
G TTN titin involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3760201|PMID:17360664)
(MGI:3653555|PMID:16702235)
RGD
TreeGrafter
MGI
PMID:11034912 PMID:16702235 PMID:17360664 GO_REF:0000118 MGI:3653555 MGI:3760201 RGD:634444 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
G WDR1 WD repeat domain 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5574550|PMID:24840128) MGI
TreeGrafter
Ensembl
PMID:24840128 GO_REF:0000107 GO_REF:0000118 MGI:5574550 NCBI chr 3:69,305,731...69,348,183
Ensembl chr 3:69,305,731...69,348,177
JBrowse link
G XIRP1 xin actin binding repeat containing 1 acts_upstream_of_or_within ISO (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chr23:8,849,713...8,859,515
Ensembl chr23:8,851,832...8,855,862
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYLK3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCAP titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TMOD1 tropomodulin 1 NOT|acts_upstream_of_or_within ISO (MGI:2683807|PMID:14657235) MGI PMID:14657235 MGI:2683807 NCBI chr11:54,853,205...54,914,236
Ensembl chr11:54,853,204...54,912,773
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA1 actin alpha 1, skeletal muscle involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:9,811,726...9,814,533
Ensembl chr 4:9,811,801...9,814,530
JBrowse link
G ACTA2 actin alpha 2, smooth muscle involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:38,700,434...38,714,915
Ensembl chr26:38,700,480...38,711,753
JBrowse link
G ACTC1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
TreeGrafter
Ensembl
PMID:9114002 GO_REF:0000107 GO_REF:0000118 MGI:87509 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G LMOD3 leiomodin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFLAR CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chr37:10,268,407...10,307,803
Ensembl chr37:10,268,582...10,345,095
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEF2A myocyte enhancer factor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,012,103...41,177,588
Ensembl chr 3:41,015,713...41,179,448
JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (MGI:4355491|PMID:19546853) MGI PMID:19546853 MGI:4355491 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17874
    cellular process 16909
      cellular developmental process 4608
        cell development 3262
          muscle cell development 245
            striated muscle cell development 83
              myofibril assembly + 80
Path 2
Term Annotations click to browse term
  biological_process 17874
    cellular process 16909
      cellular developmental process 4608
        cell differentiation 4607
          muscle cell differentiation 497
            striated muscle cell differentiation 367
              striated muscle cell development 83
                myofibril assembly + 80
paths to the root