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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell development
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Accession:GO:0055001 term browser browse the term
Definition:The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate.
Synonyms:exact_synonym: muscle fiber development;   muscle fibre development;   myofiber development;   myofibre development
 alt_id: GO:0048747



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muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN1 actinin alpha 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:42,714,806...42,808,318
Ensembl chr 8:42,712,142...42,808,323
JBrowse link
G ACTN2 actinin alpha 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:3,348,529...3,415,275
Ensembl chr 4:3,348,449...3,415,273
JBrowse link
G ACTN3 actinin alpha 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197
JBrowse link
G ACTN4 actinin alpha 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:114,354,993...114,427,997
Ensembl chr 1:114,309,693...114,427,991
JBrowse link
G AFG3L2 AFG3 like matrix AAA peptidase subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618456|PMID:2917690) MGI
Ensembl
Ensembl
PMID:2917690 GO_REF:0000107 MGI:3618456 NCBI chr 7:77,749,029...77,787,466
Ensembl chr 7:77,737,808...77,787,472
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:53761|PMID:5041196) MGI PMID:5041196 MGI:53761 NCBI chr 7:2,108,716...2,172,246
Ensembl chr 7:2,108,455...2,303,220
JBrowse link
G CACNA2D2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 acts_upstream_of_or_within ISO (MGI:3710069|PMID:17320843) MGI PMID:17320843 MGI:3710069 NCBI chr20:38,859,047...38,995,239
Ensembl chr20:38,883,530...38,993,273
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (MGI:3710069|PMID:17320843) MGI PMID:17320843 MGI:3710069 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G CAPZB capping actin protein of muscle Z-line subunit beta acts_upstream_of_or_within ISO (MGI:1350695|PMID:10601341) MGI PMID:10601341 MGI:1350695 NCBI chr 2:79,182,668...79,311,529
Ensembl chr 2:79,181,851...79,311,518
JBrowse link
G CHRNB1 cholinergic receptor nicotinic beta 1 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,375,152...32,383,517
Ensembl chr 5:32,375,215...32,382,929
JBrowse link
G COMP cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5568656|PMID:24312420)
(MGI:4412116|PMID:19808781)
MGI
Ensembl
PMID:19808781 PMID:24312420 GO_REF:0000107 MGI:4412116 MGI:5568656 NCBI chr20:44,306,813...44,314,575
Ensembl chr20:44,306,859...44,314,625
JBrowse link
G DMD dystrophin acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:66476|PMID:8007658)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:8007658 PMID:21873635 MGI:66476 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035)
(MGI:5572978|PMID:24685690)
MGI PMID:24177035 PMID:24685690 MGI:5548046 MGI:5572978 NCBI chr17:51,011,197...51,228,969
Ensembl chr17:51,011,197...51,228,876
JBrowse link
G FLNC filamin C involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:7,792,708...7,819,723
Ensembl chr14:7,793,449...7,819,940
JBrowse link
G KDM1A lysine demethylase 1A involved_in ISO (MGI:4838688|PMID:20833138) BHF-UCL PMID:20833138 MGI:4838688 NCBI chr 2:76,313,742...76,375,716
Ensembl chr 2:76,156,434...76,375,632
JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634219|PMID:25715398) MGI
Ensembl
Ensembl
PMID:25715398 GO_REF:0000107 MGI:5634219 NCBI chr11:12,023,645...12,040,015
Ensembl chr11:12,027,250...12,039,819
JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:16,359,648...16,574,882
Ensembl chr11:16,378,669...16,617,335
JBrowse link
G MIR208A microRNA mir-208a acts_upstream_of_or_within ISO (MGI:4415649|PMID:19922871) MGI PMID:19922871 MGI:4415649 NCBI chr 8:3,636,919...3,636,987
Ensembl chr 8:3,636,919...3,636,987
JBrowse link
G MIR208B microRNA mir-208b acts_upstream_of_or_within ISO (MGI:4415649|PMID:19922871) MGI PMID:19922871 MGI:4415649 NCBI chr 8:3,665,163...3,665,236
Ensembl chr 8:3,665,163...3,665,236
JBrowse link
G MYL2 myosin light chain 2 acts_upstream_of_or_within ISO (MGI:3604156|PMID:15308581) MGI PMID:15308581 MGI:3604156 NCBI chr26:8,624,147...8,632,166
Ensembl chr26:8,464,176...8,632,232
JBrowse link
G MYOF myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr28:7,602,778...7,745,185
Ensembl chr28:7,603,129...7,745,063
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:6142352|PMID:28108290) MGI PMID:28108290 MGI:6142352 NCBI chr 5:38,806,731...38,839,002
Ensembl chr 5:38,807,826...38,838,971
JBrowse link
G PTCD2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3829520|PMID:18729827) MGI
Ensembl
PMID:18729827 GO_REF:0000107 MGI:3829520 NCBI chr 2:55,351,678...55,382,881
Ensembl chr 2:55,351,558...55,382,746
JBrowse link
G SGCB sarcoglycan beta acts_upstream_of_or_within ISO (MGI:1352919|PMID:10678176) MGI PMID:10678176 MGI:1352919 NCBI chr13:44,969,483...44,987,274
Ensembl chr13:44,972,473...44,987,184
JBrowse link
G SLC8A1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO (MGI:3604156|PMID:15308581) MGI PMID:15308581 MGI:3604156 NCBI chr17:32,004,207...32,381,399
Ensembl chr17:32,005,245...32,307,700
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:5300435 NCBI chr15:29,280,423...29,350,449
Ensembl chr15:29,298,078...29,350,553
JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 acts_upstream_of_or_within ISO (MGI:66476|PMID:8007658) MGI PMID:8007658 MGI:66476 NCBI chr 3:71,396,694...71,430,395
Ensembl chr 3:71,370,822...71,411,350
JBrowse link
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5511086|PMID:24019467) MGI
Ensembl
PMID:24019467 GO_REF:0000107 MGI:5511086 NCBI chr 6:39,934,105...39,937,666
Ensembl chr 6:39,934,068...39,936,628
JBrowse link
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5511086|PMID:24019467) MGI
Ensembl
Ensembl
PMID:24019467 GO_REF:0000107 MGI:5511086 NCBI chr 9:26,711,470...26,717,625
Ensembl chr 9:26,711,959...26,716,348
JBrowse link
atrial cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHL2 four and a half LIM domains 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:37,997,912...38,065,633
Ensembl chr10:37,997,942...38,065,330
JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:33,781,294...33,787,460
Ensembl chr25:33,781,249...33,785,761
JBrowse link
atrioventricular node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923
JBrowse link
G MAML1 mastermind like transcriptional coactivator 1 involved_in ISO (MGI:5000164|PMID:21266778) BHF-UCL PMID:21266778 MGI:5000164 NCBI chr11:1,915,622...1,927,598
Ensembl chr11:1,918,133...1,963,836
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4355491|PMID:19546853) Ensembl
Ensembl
MGI
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G TBX5 T-box transcription factor 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:11,462,541...11,549,699
Ensembl chr26:11,463,653...11,506,446
JBrowse link
cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN2 actinin alpha 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:3,348,529...3,415,275
Ensembl chr 4:3,348,449...3,415,273
JBrowse link
G ALPK2 alpha kinase 2 involved_in ISO (PMID:29888752) UniProt PMID:29888752 NCBI chr 1:17,421,673...17,563,732
Ensembl chr 1:17,445,543...17,583,600
JBrowse link
G ALPK3 alpha kinase 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5644402|PMID:21441111)
(PMID:21873635)
MGI
GO_Central
PMID:21441111 PMID:21873635 MGI:5644402 NCBI chr 3:54,064,963...54,119,720
Ensembl chr 3:54,084,925...54,114,583
JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,008,206...63,051,809
Ensembl chr 8:63,008,575...63,051,581
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:3711608|PMID:17450150) MGI PMID:17450150 MGI:3711608 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G CAV3 caveolin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849772|PMID:19535499) Ensembl
Ensembl
MGI
PMID:19535499 GO_REF:0000107 MGI:3849772 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3587448|PMID:16079292) MGI
UniProt
PMID:16079292 GO_REF:0000024 MGI:3587448 NCBI chr31:14,021,292...14,079,049
Ensembl chr31:14,021,303...14,078,847
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3774881|PMID:18256189) MGI PMID:18256189 MGI:3774881 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U acts_upstream_of_or_within ISO (MGI:5648096|PMID:26039991) MGI PMID:26039991 MGI:5648096 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754
JBrowse link
G LRRC10 leucine rich repeat containing 10 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5484795|PMID:23236519)
GO_Central
MGI
PMID:21873635 PMID:23236519 MGI:5484795 NCBI chr10:11,582,160...11,585,381
Ensembl chr10:11,584,511...11,585,350
JBrowse link
G LRRD1 leucine rich repeats and death domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:17,781,791...17,811,408
Ensembl chr14:17,781,934...17,809,825
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:5529574|PMID:23994610) MGI PMID:23994610 MGI:5529574 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G MIR208A microRNA mir-208a acts_upstream_of_or_within ISO (MGI:3708230|PMID:17379774) MGI PMID:17379774 MGI:3708230 NCBI chr 8:3,636,919...3,636,987
Ensembl chr 8:3,636,919...3,636,987
JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5632243|PMID:25139234) MGI
Ensembl
PMID:25139234 GO_REF:0000107 MGI:5632243 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G MYH11 myosin heavy chain 11 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:28,041,330...28,157,277
Ensembl chr 6:28,041,318...28,262,184
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within ISO (MGI:83539|PMID:8878443)
(MGI:3526615|PMID:15001446)
(MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683)
MGI PMID:8878443 PMID:9884344 PMID:10066683 PMID:15001446 MGI:1327483 MGI:1333559 MGI:3526615 MGI:83539
G MYO18B myosin XVIIIB acts_upstream_of_or_within ISO (MGI:3821523|PMID:18761673) MGI PMID:18761673 MGI:3821523 NCBI chr26:19,520,287...19,776,007
Ensembl chr26:19,536,778...19,773,326
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G PLEC plectin involved_in ISO (MGI:1350765|PMID:9389647) MGI PMID:9389647 MGI:1350765 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in ISO (MGI:5752410|PMID:26883626)
(MGI:5586584|PMID:25190059)
MGI PMID:25190059 PMID:26883626 MGI:5586584 MGI:5752410 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303
JBrowse link
G SGCB sarcoglycan beta acts_upstream_of_or_within ISO (MGI:1352919|PMID:10678176) MGI PMID:10678176 MGI:1352919 NCBI chr13:44,969,483...44,987,274
Ensembl chr13:44,972,473...44,987,184
JBrowse link
G SGCD sarcoglycan delta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5790783|PMID:23695275) MGI
Ensembl
PMID:23695275 GO_REF:0000107 MGI:5790783 NCBI chr 4:53,259,332...54,178,228
Ensembl chr 4:53,263,866...53,820,231
JBrowse link
G SLC8A1 solute carrier family 8 member A1 acts_upstream_of_or_within
involved_in
ISO (MGI:4867054|PMID:21302256)
(MGI:1927695|PMID:10967099)
MGI
BHF-UCL
PMID:10967099 PMID:21302256 MGI:1927695 MGI:4867054 NCBI chr17:32,004,207...32,381,399
Ensembl chr17:32,005,245...32,307,700
JBrowse link
G SPEG striated muscle enriched protein kinase acts_upstream_of_or_within ISO (MGI:4830240|PMID:19118250) MGI PMID:19118250 MGI:4830240 NCBI chr37:25,947,605...26,005,601
Ensembl chr37:25,947,773...26,005,601
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:1339868|PMID:10229225) MGI PMID:10229225 MGI:1339868 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G XIRP1 xin actin binding repeat containing 1 acts_upstream_of_or_within ISO (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chr23:8,849,713...8,859,515
Ensembl chr23:8,851,832...8,855,862
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178865|PMID:11923874) MGI
Ensembl
PMID:11923874 GO_REF:0000107 MGI:2178865 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC476149 nebulin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:52,720,427...52,921,064
Ensembl chr19:52,569,894...52,919,792
JBrowse link
G NEBL nebulette involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:11,892,132...12,234,421
Ensembl chr 2:11,858,209...12,229,718
JBrowse link
G NRAP nebulin related anchoring protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:24,522,285...24,592,267
Ensembl chr28:24,522,362...24,592,192
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTC1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
Ensembl
Ensembl
PMID:9114002 GO_REF:0000107 MGI:87509 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738
JBrowse link
G FHOD3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5436289|PMID:23213483)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:21873635 PMID:23213483 GO_REF:0000107 MGI:5436289 NCBI chr 7:53,477,273...53,933,532
Ensembl chr 7:53,478,930...53,934,331
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1099556|PMID:9356462) MGI PMID:9356462 MGI:1099556 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G MYL2 myosin light chain 2 acts_upstream_of_or_within ISO (MGI:1194431|PMID:9422794) MGI PMID:9422794 MGI:1194431 NCBI chr26:8,624,147...8,632,166
Ensembl chr26:8,464,176...8,632,232
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513738|PMID:15569937) Ensembl
Ensembl
MGI
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G TCAP titin-cap involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in
acts_upstream_of_or_within
ISO (PMID:11846417), (PMID:9817758)
(MGI:3653555|PMID:16702235)
BHF-UCL
MGI
PMID:9817758 PMID:11846417 PMID:16702235 MGI:3653555 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4838384|PMID:20619341) MGI
Ensembl
PMID:20619341 GO_REF:0000107 MGI:4838384 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (MGI:4461879|PMID:18093989) BHF-UCL PMID:18093989 MGI:4461879 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1A adrenoceptor alpha 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2664013|PMID:12782680) MGI
Ensembl
Ensembl
PMID:12782680 GO_REF:0000107 MGI:2664013 NCBI chr25:30,690,959...30,801,484
Ensembl chr25:30,693,571...30,801,486
JBrowse link
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:2664013|PMID:12782680) MGI PMID:12782680 MGI:2664013 NCBI chr 4:50,676,816...50,724,999
Ensembl chr 4:50,677,255...50,724,999
JBrowse link
G AGT angiotensinogen ISO RGD PMID:21376054 RGD:5129173 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:21173078 RGD:6903878 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853
JBrowse link
G AKAP13 A-kinase anchoring protein 13 ISO RGD PMID:18951085 RGD:2312638 NCBI chr 3:49,076,313...49,310,564
Ensembl chr 3:49,076,642...49,308,221
JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:21554860 RGD:6907064 NCBI chr32:33,223,093...33,525,783
Ensembl chr32:33,224,716...33,525,371
JBrowse link
G GATA4 GATA binding protein 4 ISO RGD PMID:20971938 RGD:5131529 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:27854077 RGD:13792737 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:9769323 RGD:7495831 NCBI chr 5:36,142,610...36,243,673
Ensembl chr 5:36,118,388...36,241,296
JBrowse link
G MYL2 myosin light chain 2 ISO RGD PMID:7657802 RGD:1580138 NCBI chr26:8,624,147...8,632,166
Ensembl chr26:8,464,176...8,632,232
JBrowse link
G MYOCD myocardin ISO RGD PMID:18772130 RGD:5132877 NCBI chr 5:36,674,476...36,774,435
Ensembl chr 5:36,674,300...36,769,327
JBrowse link
G NPPA natriuretic peptide A ISO RGD PMID:7657802 RGD:1580138 NCBI chr 2:84,406,317...84,408,115
Ensembl chr 2:84,396,073...84,408,385
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:7657802 RGD:1580138 NCBI chr 2:84,395,844...84,397,473 JBrowse link
G PDLIM5 PDZ and LIM domain 5 involved_in ISO PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr32:17,294,023...17,505,212
Ensembl chr32:17,294,073...17,502,409
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:19542178 RGD:7775063 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729
JBrowse link
G SORBS2 sorbin and SH3 domain containing 2 involved_in ISO PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr16:44,847,384...45,063,218
Ensembl chr16:44,717,052...45,061,337
JBrowse link
myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPN3 calpain 3 acts_upstream_of_or_within ISO (MGI:3046122|PMID:15138196) MGI PMID:15138196 MGI:3046122 NCBI chr30:9,329,190...9,384,622
Ensembl chr30:9,329,015...9,383,772
JBrowse link
G FLII FLII actin remodeling protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:41,303,015...41,314,849
Ensembl chr 5:41,302,767...41,314,862
JBrowse link
G KLHL41 kelch like family member 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:14,235,845...14,251,621
Ensembl chr36:14,235,941...14,251,083
JBrowse link
G LMOD2 leiomodin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:11,916,842...11,924,616
Ensembl chr14:11,917,878...11,924,438
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:1354135|PMID:10712438) MGI PMID:10712438 MGI:1354135 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within ISO (MGI:83539|PMID:8878443)
(MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683)
MGI PMID:8878443 PMID:9884344 PMID:10066683 MGI:1327483 MGI:1333559 MGI:83539
G NEURL2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr24:33,179,455...33,182,950
Ensembl chr24:33,180,731...33,182,714
JBrowse link
G PGM5 phosphoglucomutase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:88,823,883...89,011,091
Ensembl chr 1:88,825,152...88,994,750
JBrowse link
G TMOD1 tropomodulin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:2683807|PMID:14657235)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:14657235 PMID:21873635 GO_REF:0000107 MGI:2683807 NCBI chr11:54,853,205...54,914,236
Ensembl chr11:54,853,204...54,912,773
JBrowse link
G TMOD2 tropomodulin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:17,425,216...17,501,484
Ensembl chr30:17,455,987...17,592,580
JBrowse link
G TMOD3 tropomodulin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:17,509,533...17,594,355
Ensembl chr30:17,455,987...17,592,580
JBrowse link
G TMOD4 tropomodulin 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:60,234,061...60,238,950
Ensembl chr17:60,234,096...60,238,864
JBrowse link
myotube cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin acts_upstream_of_or_within ISO (MGI:3849772|PMID:19535499) MGI PMID:19535499 MGI:3849772 NCBI chr  X:26,290,903...28,444,635
Ensembl chr  X:26,290,910...28,333,576
JBrowse link
G IGF1 insulin like growth factor 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712
JBrowse link
G NFATC2 nuclear factor of activated T cells 2 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) MGI PMID:18676376 MGI:3821556 NCBI chr24:37,606,977...37,734,813
Ensembl chr24:37,609,561...37,771,132
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) MGI PMID:18676376 MGI:3821556 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G SMYD3 SET and MYND domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5500979|PMID:23752591) MGI
Ensembl
Ensembl
PMID:23752591 GO_REF:0000107 MGI:5500979 NCBI chr 7:36,561,080...37,250,336
Ensembl chr 7:36,565,901...37,250,578
JBrowse link
myotube cell development involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TMEM182 transmembrane protein 182 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:40,227,230...40,283,747
Ensembl chr10:40,102,097...40,283,703
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 ISO RGD PMID:21170593 RGD:6784534 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G CTDP1 CTD phosphatase subunit 1 ISO RGD PMID:22569295 RGD:9686371 NCBI chr 1:886,973...945,994
Ensembl chr 1:762,020...946,142
JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:26333362 RGD:11561912 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase ISO RGD PMID:24190878 RGD:10449133 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,129,116...112,138,714
Ensembl chr 1:112,103,825...112,138,559
JBrowse link
G MIR451 microRNA mir-451 ISO RGD PMID:25209900 RGD:11558015 NCBI chr 9:43,030,863...43,030,931
Ensembl chr 9:43,030,863...43,030,931
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:22082674 RGD:11533929 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416
JBrowse link
G PI16 peptidase inhibitor 16 acts_upstream_of_or_within ISO (MGI:3810223|PMID:17909105) MGI PMID:17909105 MGI:3810223 NCBI chr12:6,017,312...6,027,048
Ensembl chr12:6,017,522...6,026,307
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO RGD PMID:22198280 RGD:5687133 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G RBM10 RNA binding motif protein 10 ISO RGD PMID:30257214 RGD:151667449 NCBI chr  X:40,746,959...40,776,764
Ensembl chr  X:40,747,178...40,776,742
JBrowse link
G RGS2 regulator of G protein signaling 2 ISO RGD PMID:16380388 RGD:13524577 NCBI chr38:6,200,237...6,203,491
Ensembl chr38:6,200,657...6,203,494
JBrowse link
G RGS4 regulator of G protein signaling 4 ISO RGD PMID:9918533 RGD:7207376 NCBI chr38:19,771,454...19,778,917
Ensembl chr38:19,771,441...19,779,190
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 ISO RGD PMID:25022898 RGD:13464131 NCBI chr33:6,976,322...7,009,618
Ensembl chr33:6,976,934...7,009,594
JBrowse link
G YY1 YY1 transcription factor ISO RGD PMID:18632988 RGD:9588273 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:24777478 RGD:13204833 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP1 contactin associated protein 1 involved_in ISO (MGI:6269164|PMID:28370195) MGI PMID:28370195 MGI:6269164 NCBI chr 9:20,293,184...20,307,708
Ensembl chr 9:20,293,170...20,307,662
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6269164|PMID:28370195) MGI PMID:28370195 MGI:6269164 NCBI chr16:2,239,953...4,208,718
Ensembl chr16:2,243,918...4,208,416
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5605930|PMID:25014022) MGI PMID:25014022 MGI:5605930 NCBI chr 5:38,806,731...38,839,002
Ensembl chr 5:38,807,826...38,838,971
JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:18194989 RGD:5129139 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684
JBrowse link
G AKAP6 A-kinase anchoring protein 6 ISO RGD PMID:16306226 PMID:21550986 RGD:2312613 RGD:6902940 NCBI chr 8:11,403,655...11,882,684
Ensembl chr 8:11,406,280...11,874,406
JBrowse link
G CCN4 cellular communication network factor 4 ISO RGD PMID:21376054 RGD:5129173 NCBI chr13:29,648,720...29,683,822
Ensembl chr13:29,648,639...29,679,732
JBrowse link
G DDX39B DExD-box helicase 39B ISO RGD PMID:20116367 RGD:10401141 NCBI chr12:1,032,377...1,044,465
Ensembl chr12:1,032,368...1,044,492
JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G FDPS farnesyl diphosphate synthase ISO RGD PMID:19716825 RGD:2316294 NCBI chr 7:42,241,086...42,250,373
Ensembl chr 7:42,241,107...42,250,225
JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:24424338 RGD:11041632 NCBI chr 1:117,305,531...117,306,587
Ensembl chr 1:117,305,411...117,306,619
JBrowse link
G IGF1 insulin like growth factor 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G MIR19A microRNA mir-19a involved_in ISO (PMID:24117217) BHF-UCL PMID:24117217 NCBI chr22:42,478,298...42,478,355
Ensembl chr22:42,478,285...42,478,366
JBrowse link
G MIR19B-1 microRNA mir-19b-1 involved_in ISO (PMID:24117217) BHF-UCL PMID:24117217 NCBI chr22:42,478,598...42,478,656 JBrowse link
G MIR19B-2 microRNA mir-19b-2 involved_in ISO (PMID:24117217) BHF-UCL PMID:24117217 NCBI chr  X:104,895,962...104,896,025
Ensembl chr  X:104,895,962...104,896,025
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21318349 PMID:21933187 RGD:10040977 RGD:10040978 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:22989630 RGD:7174736 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755
JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 ISO RGD PMID:23261455 RGD:13514044 NCBI chr15:17,705,966...17,716,743
Ensembl chr15:17,705,975...17,716,094
JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:23487407 RGD:8693424 NCBI chr20:51,156,887...51,168,131
Ensembl chr20:51,157,121...51,168,136
JBrowse link
G SIRT1 sirtuin 1 ISO RGD PMID:25281201 RGD:13514043 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO RGD PMID:21325829 RGD:9681466 NCBI chr16:45,454,660...45,458,606
Ensembl chr16:45,411,810...45,542,162
JBrowse link
G TRIP10 thyroid hormone receptor interactor 10 ISO RGD PMID:23915320 RGD:11535145 NCBI chr20:53,543,861...53,554,421
Ensembl chr20:53,544,005...53,554,270
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO RGD PMID:12724418 RGD:2312280 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP10 bone morphogenetic protein 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:67,717,047...67,724,778
Ensembl chr10:67,717,980...67,724,739
JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO RGD PMID:12724418 RGD:2312280 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928555|PMID:11146504) MGI
Ensembl
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214
JBrowse link
G MYF5 myogenic factor 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:23,049,235...23,051,604
Ensembl chr15:23,048,585...23,051,970
JBrowse link
G MYF6 myogenic factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:23,039,090...23,041,092
Ensembl chr15:23,039,416...23,041,019
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712
JBrowse link
G MYOG myogenin involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 7:112,116...114,604
Ensembl chr 7:112,034...113,892
JBrowse link
G SHOX2 short stature homeobox 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566
JBrowse link
regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL14A1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO (MGI:5444801|PMID:22906538) MGI PMID:22906538 MGI:5444801 NCBI chr13:19,033,423...19,249,189
Ensembl chr13:19,011,897...19,248,568
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP13 A-kinase anchoring protein 13 involved_in ISO (MGI:5308772|PMID:20139090) UniProt PMID:20139090 MGI:5308772 NCBI chr 3:49,076,313...49,310,564
Ensembl chr 3:49,076,642...49,308,221
JBrowse link
G ANKRD23 ankyrin repeat domain 23 acts_upstream_of_or_within ISO (MGI:3760007|PMID:17392382) MGI PMID:17392382 MGI:3760007 NCBI chr10:45,128,411...45,134,234
Ensembl chr10:45,117,903...45,132,817
JBrowse link
G HDAC2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:3711360|PMID:17322895) MGI PMID:17322895 MGI:3711360 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578
JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3768576|PMID:17875930) MGI PMID:17875930 MGI:3768576 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO22 F-box protein 22 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3840749|PMID:19319192)
GO_Central
MGI
PMID:19319192 PMID:21873635 MGI:3840749 NCBI chr30:40,100,768...40,127,708
Ensembl chr30:40,101,540...40,189,159
JBrowse link
G HDAC4 histone deacetylase 4 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr25:49,318,621...49,545,314
Ensembl chr25:49,317,349...49,453,478
JBrowse link
G HDAC5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr 9:19,261,075...19,297,669
Ensembl chr 9:19,260,893...19,297,623
JBrowse link
G HDAC9 histone deacetylase 9 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr14:32,469,349...33,310,439
Ensembl chr14:32,588,414...33,304,387
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr10:938,682...949,103
Ensembl chr10:938,683...949,032
Ensembl chr 7:938,683...949,032
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 acts_upstream_of_or_within ISO (MGI:3053481|PMID:15194427) MGI PMID:15194427 MGI:3053481 NCBI chr 9:635,978...638,328
Ensembl chr 9:635,978...638,328
JBrowse link
G ACTN1 actinin alpha 1 involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:42,714,806...42,808,318
Ensembl chr 8:42,712,142...42,808,323
JBrowse link
G ACTN2 actinin alpha 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:3,348,529...3,415,275
Ensembl chr 4:3,348,449...3,415,273
JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in ISO PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chr10:67,717,047...67,724,778
Ensembl chr10:67,717,980...67,724,739
JBrowse link
G CAPN3 calpain 3 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3046122|PMID:15138196) MGI
InterPro
InterPro
UniProt
PMID:15138196 GO_REF:0000002 GO_REF:0000024 MGI:3046122 NCBI chr30:9,329,190...9,384,622
Ensembl chr30:9,329,015...9,383,772
JBrowse link
G CASQ1 calsequestrin 1 involved_in ISO (MGI:5306707|PMID:22049211) UniProt PMID:22049211 MGI:5306707 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383
JBrowse link
G CASQ2 calsequestrin 2 involved_in ISO (MGI:4453101|PMID:19920148) UniProt PMID:19920148 MGI:4453101 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708
JBrowse link
G CFL2 cofilin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5316079|PMID:22343409) Ensembl
MGI
Ensembl
PMID:22343409 GO_REF:0000107 MGI:5316079 NCBI chr 8:13,578,152...13,582,408
Ensembl chr 8:13,580,360...13,582,442
JBrowse link
G CSRP1 cysteine and glycine rich protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:1,400,650...1,421,918
Ensembl chr 7:1,397,912...1,421,007
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738
JBrowse link
G FHOD3 formin homology 2 domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:4422153|PMID:19706596)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:19706596 PMID:21873635 GO_REF:0000107 MGI:4422153 RGD:8554207 NCBI chr 7:53,477,273...53,933,532
Ensembl chr 7:53,478,930...53,934,331
JBrowse link
G FLNC filamin C involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,792,708...7,819,723
Ensembl chr14:7,793,449...7,819,940
JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84974|PMID:9004034) MGI
Ensembl
Ensembl
PMID:9004034 GO_REF:0000107 MGI:84974 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961
JBrowse link
G KLHL41 kelch like family member 41 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr36:14,235,845...14,251,621
Ensembl chr36:14,235,941...14,251,083
JBrowse link
G KRT19 keratin 19 involved_in ISO (PMID:16000376) UniProt PMID:16000376 NCBI chr 9:21,240,778...21,245,039 JBrowse link
G KRT8 keratin 8 involved_in ISO PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chr27:2,221,608...2,229,343 JBrowse link
G LDB3 LIM domain binding 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153618|PMID:11696561) MGI
Ensembl
PMID:11696561 GO_REF:0000107 MGI:2153618 NCBI chr 4:34,367,155...34,421,992
Ensembl chr 4:34,364,025...34,421,509
JBrowse link
G LMOD2 leiomodin 2 involved_in ISO (PMID:18403713)
(MGI:5787841|PMID:27274810)
UniProt PMID:18403713 PMID:27274810 MGI:5787841 RGD:11344939 NCBI chr14:11,916,842...11,924,616
Ensembl chr14:11,917,878...11,924,438
JBrowse link
G MYBPC3 myosin binding protein C3 acts_upstream_of_or_within ISO (MGI:3616388|PMID:16380103)
(MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063)
MGI PMID:16224063 PMID:16380103 PMID:17075052 MGI:3616388 MGI:3695637 MGI:3696622 NCBI chr18:42,271,159...42,288,782
Ensembl chr18:42,271,724...42,289,215
JBrowse link
G MYH6 myosin heavy chain 6 acts_upstream_of_or_within ISO (MGI:83539|PMID:8878443) MGI PMID:8878443 MGI:83539
G MYH7 myosin heavy chain 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:3,660,155...3,677,650
Ensembl chr 8:3,629,585...3,792,725
JBrowse link
G MYLK3 myosin light chain kinase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G MYOM2 myomesin 2 involved_in ISO (PMID:33033063) FlyBase PMID:33033063 NCBI chr16:54,379,342...54,392,955 JBrowse link
G MYOZ1 myozenin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:24,158,532...24,165,416
Ensembl chr 4:24,158,720...24,165,392
JBrowse link
G MYOZ2 myozenin 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr32:38,088,505...38,132,265
Ensembl chr32:38,088,527...38,132,285
JBrowse link
G MYPN myopalladin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:19,364,146...19,468,827
Ensembl chr 4:19,381,416...19,465,995
JBrowse link
G NEURL2 neuralized E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO (MGI:3042352|PMID:14960280) MGI PMID:14960280 MGI:3042352 NCBI chr24:33,179,455...33,182,950
Ensembl chr24:33,180,731...33,182,714
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G PLEC plectin involved_in ISO (MGI:5567855|PMID:24487589) MGI PMID:24487589 MGI:5567855 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha acts_upstream_of_or_within ISO (MGI:3821563|PMID:18316483) MGI PMID:18316483 MGI:3821563 NCBI chr 9:15,180,940...15,203,035
Ensembl chr 9:15,181,393...15,200,683
JBrowse link
G SIX4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) UniProt PMID:21884692 MGI:5298278 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513738|PMID:15569937) Ensembl
Ensembl
MGI
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G SYNPO2L synaptopodin 2 like involved_in ISO (MGI:6102963|PMID:29206857) BHF-UCL PMID:29206857 MGI:6102963 NCBI chr 4:24,168,030...24,177,710
Ensembl chr 4:24,169,707...24,177,813
JBrowse link
G TCAP titin-cap involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TNNT1 troponin T1, slow skeletal type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:102,479,617...102,490,776
Ensembl chr 1:102,366,801...102,491,147
JBrowse link
G TNNT2 troponin T2, cardiac type acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1342889|PMID:10449439)
(PMID:21873635)
MGI
GO_Central
PMID:10449439 PMID:21873635 MGI:1342889 NCBI chr 7:1,598,306...1,620,531
Ensembl chr 7:1,598,306...1,613,741
JBrowse link
G TNNT3 troponin T3, fast skeletal type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:46,131,925...46,148,577
Ensembl chr18:46,074,700...46,149,131
JBrowse link
G TPM1 tropomyosin 1 involved_in ISO (PMID:11273725) BHF-UCL PMID:11273725 NCBI chr30:27,636,407...27,664,907
Ensembl chr30:27,636,283...27,664,442
JBrowse link
G TTN titin acts_upstream_of_or_within
involved_in
ISO (MGI:3760201|PMID:17360664)
(MGI:3653555|PMID:16702235)
(PMID:11846417), (PMID:9817758)
RGD
MGI
BHF-UCL
PMID:9817758 PMID:11034912 PMID:11846417 PMID:16702235 PMID:17360664 MGI:3653555 MGI:3760201 RGD:634444 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
G WDR1 WD repeat domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5574550|PMID:24840128)
GO_Central
MGI
PMID:21873635 PMID:24840128 MGI:5574550 NCBI chr 3:69,305,731...69,348,183
Ensembl chr 3:69,305,731...69,348,177
JBrowse link
G XIRP1 xin actin binding repeat containing 1 acts_upstream_of_or_within ISO (MGI:3775114|PMID:17766470) MGI PMID:17766470 MGI:3775114 NCBI chr23:8,849,713...8,859,515
Ensembl chr23:8,851,832...8,855,862
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYLK3 myosin light chain kinase 3 involved_in ISO PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr15:8,382,436...8,416,740
Ensembl chr15:8,381,854...8,416,368
JBrowse link
G TCAP titin-cap involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BVES blood vessel epicardial substance acts_upstream_of_or_within ISO (MGI:5424322|PMID:22354168) MGI PMID:22354168 MGI:5424322 NCBI chr12:62,542,274...62,581,110
Ensembl chr12:62,545,666...62,579,548
JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in ISO (MGI:5688210|PMID:26193633) BHF-UCL PMID:26193633 MGI:5688210 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183
JBrowse link
G POPDC2 popeye domain containing 2 acts_upstream_of_or_within ISO (MGI:5424322|PMID:22354168) MGI PMID:22354168 MGI:5424322 NCBI chr33:23,275,666...23,295,413
Ensembl chr33:23,276,455...23,295,088
JBrowse link
G SHOX2 short stature homeobox 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566
JBrowse link
G TBX18 T-box transcription factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4366226|PMID:19096026) MGI
Ensembl
PMID:19096026 GO_REF:0000107 MGI:4366226 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA1 actin alpha 1, skeletal muscle involved_in ISO (MGI:78319|PMID:2731651) UniProt PMID:2731651 MGI:78319 NCBI chr 4:9,811,726...9,814,533
Ensembl chr 4:9,811,801...9,814,530
JBrowse link
G ACTN1 actinin alpha 1 involved_in ISS AgBase GO_REF:0000024 NCBI chr 8:42,714,806...42,808,318
Ensembl chr 8:42,712,142...42,808,323
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of
involved_in
ISO
IEA
(MGI:1928555|PMID:11146504) MGI
Ensembl
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BIN3 bridging integrator 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5517720|PMID:23872330) Ensembl
Ensembl
MGI
PMID:23872330 GO_REF:0000107 MGI:5517720 NCBI chr25:34,615,683...34,659,739
Ensembl chr25:34,615,249...34,659,755
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749)
(MGI:66718|PMID:8143864)
MGI PMID:289331 PMID:8143864 PMID:8462749 MGI:3630139 MGI:53207 MGI:66718 NCBI chr 7:2,108,716...2,172,246
Ensembl chr 7:2,108,455...2,303,220
JBrowse link
G CAV2 caveolin 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3695802|PMID:17200204) UniProt
Ensembl
UniProt
MGI
PMID:17200204 GO_REF:0000024 GO_REF:0000107 MGI:3695802 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G DNER delta/notch like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) MGI PMID:15965470 MGI:3583881 NCBI chr25:41,709,570...41,887,705
Ensembl chr25:41,710,420...42,019,885
JBrowse link
G GPX1 glutathione peroxidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3662804|PMID:16962942) MGI
Ensembl
Ensembl
PMID:16962942 GO_REF:0000107 MGI:3662804 NCBI chr20:39,889,165...39,890,253
Ensembl chr20:39,889,174...39,890,260
JBrowse link
G HOMER1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3784629|PMID:18268005) Ensembl
Ensembl
MGI
PMID:18268005 GO_REF:0000107 MGI:3784629 NCBI chr 3:27,395,337...27,525,822
Ensembl chr 3:27,400,839...27,523,320
JBrowse link
G KEL Kell metallo-endopeptidase acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chr16:6,396,724...6,645,221
Ensembl chr16:6,623,824...6,645,094
JBrowse link
G KLHL40 kelch like family member 40 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5586592|PMID:24960163)
(PMID:21873635)
MGI
InterPro
GO_Central
PMID:21873635 PMID:24960163 GO_REF:0000002 MGI:5586592 NCBI chr23:11,812,268...11,820,426
Ensembl chr23:11,813,550...11,820,420
JBrowse link
G KLHL41 kelch like family member 41 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr36:14,235,845...14,251,621
Ensembl chr36:14,235,941...14,251,083
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) UniProt PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840749|PMID:19319192) Ensembl
Ensembl
MGI
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712
JBrowse link
G MYOG myogenin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:62381|PMID:8393145) Ensembl
Ensembl
MGI
PMID:8393145 GO_REF:0000107 MGI:62381 NCBI chr 7:112,116...114,604
Ensembl chr 7:112,034...113,892
JBrowse link
G MYORG myogenesis regulating glycosidase (putative) involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4422154|PMID:19706595)
GO_Central
MGI
PMID:19706595 PMID:21873635 MGI:4422154 NCBI chr11:51,070,088...51,077,595
Ensembl chr11:51,071,707...51,073,851
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:1933051|PMID:11254352) MGI PMID:11254352 MGI:1933051 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G P2RX2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (MGI:3766888|PMID:17706883) MGI PMID:17706883 MGI:3766888 NCBI chr26:480,370...485,527
Ensembl chr26:482,425...485,502
JBrowse link
G PLEC plectin involved_in ISO (MGI:3797705|PMID:18490514)
(MGI:5567855|PMID:24487589)
MGI PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO (MGI:3586394|PMID:16024798)
(MGI:3641363|PMID:12773574)
MGI
UniProt
PMID:12773574 PMID:16024798 MGI:3586394 MGI:3641363 NCBI chr32:22,688,141...22,996,693
Ensembl chr32:22,688,143...22,996,688
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in ISO (MGI:3641363|PMID:12773574) UniProt PMID:12773574 MGI:3641363 NCBI chr 4:23,976,023...24,028,139
Ensembl chr 4:23,977,317...24,028,153
JBrowse link
G RCAN1 regulator of calcineurin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3586394|PMID:16024798) MGI
Ensembl
PMID:16024798 GO_REF:0000107 MGI:3586394 NCBI chr31:29,908,046...30,002,412
Ensembl chr31:29,909,388...30,002,418
JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr35:22,823,053...23,041,765
Ensembl chr35:22,824,106...23,041,743
JBrowse link
G RYR1 ryanodine receptor 1 involved_in ISO (MGI:3764002|PMID:18003898) UniProt PMID:18003898 MGI:3764002 NCBI chr 1:114,461,350...114,579,577
Ensembl chr 1:114,461,348...114,579,493
JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5494499|PMID:23325319)
(PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:23325319 MGI:5494499 NCBI chr 2:74,134,448...74,149,585 JBrowse link
G SIX1 SIX homeobox 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5438143|PMID:22987639) MGI
Ensembl
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6141536|PMID:28237315) MGI
Ensembl
PMID:28237315 GO_REF:0000107 MGI:6141536 NCBI chr30:11,233,709...11,305,454
Ensembl chr30:11,233,718...11,305,485
JBrowse link
G STAC3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) MGI PMID:23626854 MGI:5508972 NCBI chr10:1,370,340...1,377,769 JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chr27:5,599,905...5,605,506
Ensembl chr27:5,601,089...5,605,501
JBrowse link
G XK X-linked Kx blood group antigen, Kell and VPS13A binding protein acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chr  X:32,453,404...32,498,145
Ensembl chr  X:32,453,570...32,495,110
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCAP titin-cap involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TMOD1 tropomodulin 1 NOT|acts_upstream_of_or_within ISO (MGI:2683807|PMID:14657235) MGI PMID:14657235 MGI:2683807 NCBI chr11:54,853,205...54,914,236
Ensembl chr11:54,853,204...54,912,773
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA1 actin alpha 1, skeletal muscle involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:9,811,726...9,814,533
Ensembl chr 4:9,811,801...9,814,530
JBrowse link
G ACTC1 actin alpha cardiac muscle 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:87509|PMID:9114002) MGI
Ensembl
Ensembl
PMID:9114002 GO_REF:0000107 MGI:87509 NCBI chr30:2,514,825...2,519,398
Ensembl chr30:2,514,824...2,519,382
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chr20:22,612,916...22,629,207
Ensembl chr20:22,612,946...22,629,214
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G TCAP titin-cap involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TTN titin involved_in ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFLAR CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chr37:10,268,407...10,307,803
Ensembl chr37:10,268,582...10,345,095
JBrowse link
G PLEC plectin involved_in ISO (MGI:5567855|PMID:24487589) MGI PMID:24487589 MGI:5567855 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
striated muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SDC1 syndecan 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:15,220,906...15,243,974
Ensembl chr17:15,222,094...15,243,890
JBrowse link
G TTN titin acts_upstream_of_or_within ISO (MGI:3604932|PMID:16115818) MGI PMID:16115818 MGI:3604932 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
T-tubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3610760|PMID:16292983)
(MGI:4844023|PMID:20610380)
BHF-UCL
MGI
PMID:16292983 PMID:20610380 MGI:3610760 MGI:4844023 NCBI chr32:32,484,196...33,143,295
Ensembl chr32:32,671,281...33,141,036
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:5314827|PMID:22355118) MGI PMID:22355118 MGI:5314827 NCBI chr26:8,148,181...8,209,392
Ensembl chr26:8,148,236...8,209,388
JBrowse link
G BIN1 bridging integrator 1 involved_in ISO (PMID:24755653)
(MGI:5583915|PMID:24836577)
UniProt
ARUK-UCL
PMID:24755653 PMID:24836577 MGI:5583915 NCBI chr19:23,503,934...23,534,407
Ensembl chr19:23,375,363...23,534,303
JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5927126|PMID:28706255) Ensembl
Ensembl
MGI
PMID:28706255 GO_REF:0000107 MGI:5927126 NCBI chr21:41,300,277...41,318,788
Ensembl chr21:41,300,425...41,318,738
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5545678|PMID:24302765)
(PMID:21873635)
(MGI:5548046|PMID:24177035)
MGI
GO_Central
PMID:21873635 PMID:24177035 PMID:24302765 MGI:5545678 MGI:5548046 NCBI chr17:51,011,197...51,228,969
Ensembl chr17:51,011,197...51,228,876
JBrowse link
G FER1L5 fer-1 like family member 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:45,246,957...45,304,875
Ensembl chr10:45,247,164...45,304,793
JBrowse link
G MYOF myoferlin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5548046|PMID:24177035)
GO_Central
MGI
PMID:21873635 PMID:24177035 MGI:5548046 NCBI chr28:7,602,778...7,745,185
Ensembl chr28:7,603,129...7,745,063
JBrowse link
G SYPL2 synaptophysin like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5927126|PMID:28706255) MGI
Ensembl
PMID:28706255 GO_REF:0000107 MGI:5927126 NCBI chr 6:42,377,528...42,391,765
Ensembl chr 6:42,380,144...42,385,102
JBrowse link
vascular associated smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495
JBrowse link
G COMP cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5318950|PMID:21350216) MGI
Ensembl
PMID:21350216 GO_REF:0000107 MGI:5318950 NCBI chr20:44,306,813...44,314,575
Ensembl chr20:44,306,859...44,314,625
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5584046|PMID:23636094) UniProt PMID:23636094 MGI:5584046 NCBI chr18:51,389,797...51,396,109
Ensembl chr18:51,389,824...51,396,107
JBrowse link
G ENG endoglin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO (MGI:4453944|PMID:20122914) BHF-UCL PMID:20122914 MGI:4453944
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISO (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chr 9:20,250,711...20,252,485 JBrowse link
G SGCB sarcoglycan beta acts_upstream_of_or_within ISO (MGI:1352919|PMID:10678176) MGI PMID:10678176 MGI:1352919 NCBI chr13:44,969,483...44,987,274
Ensembl chr13:44,972,473...44,987,184
JBrowse link
G VPS25 vacuolar protein sorting 25 homolog involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:20,242,230...20,247,396 JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3711608|PMID:17450150) Ensembl
MGI
Ensembl
PMID:17450150 GO_REF:0000107 MGI:3711608 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:67,717,047...67,724,778
Ensembl chr10:67,717,980...67,724,739
JBrowse link
G CCNB1 cyclin B1 ISO RGD PMID:15253691 RGD:2301353 NCBI chr 2:54,256,957...54,264,749 JBrowse link
G CDK1 cyclin dependent kinase 1 ISO RGD PMID:15253691 RGD:2301353 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197
JBrowse link
G FHL2 four and a half LIM domains 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:37,997,912...38,065,633
Ensembl chr10:37,997,942...38,065,330
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G LMNA lamin A/C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3027329|PMID:14755333) Ensembl
Ensembl
MGI
PMID:14755333 GO_REF:0000107 MGI:3027329 NCBI chr 7:41,702,491...41,719,870
Ensembl chr 7:41,508,450...41,746,931
JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (MGI:3052228|PMID:12893741) MGI PMID:12893741 MGI:3052228 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934
JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:33,781,294...33,787,460
Ensembl chr25:33,781,249...33,785,761
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3841866|PMID:18292603) MGI PMID:18292603 MGI:3841866 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEF2A myocyte enhancer factor 2A involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:41,012,103...41,177,588
Ensembl chr 3:41,015,713...41,179,448
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4355491|PMID:19546853) Ensembl
Ensembl
MGI
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17320
    cellular process 16305
      cellular developmental process 4398
        cell development 3133
          muscle cell development 227
            T-tubule organization 8
            cardiac muscle cell development + 111
            myotube cell development + 49
            striated muscle cell development + 70
            vascular associated smooth muscle cell development + 14
Path 2
Term Annotations click to browse term
  biological_process 17320
    cellular process 16305
      cellular developmental process 4398
        cell differentiation 4375
          muscle cell differentiation 462
            muscle cell development 227
              T-tubule organization 8
              cardiac muscle cell development + 111
              myotube cell development + 49
              striated muscle cell development + 70
              vascular associated smooth muscle cell development + 14
paths to the root