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ONTOLOGY REPORT - ANNOTATIONS


Term:pigment granule transport
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Accession:GO:0051904 term browser browse the term
Definition:The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Synonyms:exact_synonym: pigment granule translocation


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pigment granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA acts_upstream_of_or_within ISO MGI:1856716|MGI:2155422 (MGI:1267003|PMID:9620764), (MGI:3512820|PMID:15572405) RGD PMID:9620764 PMID:15572405 MGI:1267003 MGI:3512820 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO MGI:1856656 (MGI:3512820|PMID:15572405) RGD PMID:15572405 MGI:3512820 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221
JBrowse link
melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within ISO MGI:1855937 (MGI:1202196|PMID:9548375) RGD PMID:9548375 MGI:1202196 NCBI chr 3:150,492,010...150,579,870
Ensembl chr 3:150,574,473...150,579,870
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISO
ISS
(PMID:17182842)
GO_REF:0000024
RGD
UniProt
PMID:17182842 GO_REF:0000024 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Dctn1 dynactin subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5492030|PMID:22275436)
Ensembl
RGD
PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Dctn2 dynactin subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5492030|PMID:22275436)
Ensembl
RGD
PMID:22275436 GO_REF:0000107 MGI:5492030 NCBI chr 7:70,555,953...70,571,433
Ensembl chr 7:70,556,019...70,572,614
JBrowse link
G Gpr143 G protein-coupled receptor 143 involved_in ISO (PMID:19717472) RGD PMID:19717472 NCBI chr  X:23,668,363...23,693,162
Ensembl chr  X:23,668,363...23,693,162
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA positive regulation of bidirectional melanosome transport along microtubules RGD PMID:15753041 RGD:2293208 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Mreg melanoregulin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5492030|PMID:22275436)
RGD PMID:22275436, PMID:21873635 MGI:5492030, RGD:13792537 NCBI chr 9:79,490,058...79,559,768
Ensembl chr 9:79,490,050...79,545,024
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856004|MGI:1858077 (MGI:1202196|PMID:9548375), (MGI:3653524|PMID:11266473), (MGI:5569175|PMID:24721909), (MGI:87417|PMID:9133672) RGD PMID:9133672 PMID:9548375 PMID:11266473 PMID:24721909 MGI:1202196 MGI:3653524 MGI:5569175 MGI:87417 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5487521|PMID:21291502)
PMID:21873635
UniProt
RGD
PMID:21291502, PMID:21873635 GO_REF:0000024 MGI:5487521, RGD:13792537 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:5487521|PMID:21291502)
UniProt
RGD
PMID:21291502 GO_REF:0000024 MGI:5487521 NCBI chr 7:18,598,991...18,612,132
Ensembl chr 7:18,598,880...18,612,147
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5487521|PMID:21291502) RGD PMID:21291502 MGI:5487521 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (MGI:5526918|PMID:22854043) RGD PMID:22854043 MGI:5526918 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Rab27a RAB27A, member RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1856656 (MGI:3653524|PMID:11266473)
RGD PMID:11266473, PMID:21873635 MGI:3653524, RGD:13792537 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:68,486,006...68,644,595
Ensembl chr18:68,488,942...68,551,558
JBrowse link
positive regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh3 cadherin 3 involved_in ISO (PMID:23334344) RGD PMID:23334344 NCBI chr19:38,668,957...38,719,801
Ensembl chr19:38,669,230...38,719,677
JBrowse link
regulation of melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr143 G protein-coupled receptor 143 involved_in ISO (MGI:3813974|PMID:18697795) RGD PMID:18697795 MGI:3813974 NCBI chr  X:23,668,363...23,693,162
Ensembl chr  X:23,668,363...23,693,162
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    pigmentation 100
      cellular pigmentation 44
        pigment granule localization 22
          pigment granule transport 18
            melanosome transport + 17
Path 2
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      cellular localization 2983
        organelle localization 568
          establishment of organelle localization 416
            establishment of vesicle localization 159
              establishment of pigment granule localization 19
                pigment granule transport 18
                  melanosome transport + 17
paths to the root