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ONTOLOGY REPORT - ANNOTATIONS


Term:glycolipid binding
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Accession:GO:0051861 term browser browse the term
Definition:Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.



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glycolipid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4e C-type lectin domain family 4, member E enables IEA
ISO
ISS
GO_REF:0000107
CHEBI:82624 (MGI:4415080|PMID:20008526)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20008526 GO_REF:0000024 GO_REF:0000107 MGI:4415080 NCBI chr 4:156,606,927...156,612,911
Ensembl chr 4:156,607,614...156,612,767
JBrowse link
G Clec4f C-type lectin domain family 4, member F enables ISO (MGI:5525181|PMID:23762286) RGD PMID:23762286 MGI:5525181 NCBI chr 4:116,129,023...116,138,744
Ensembl chr 4:116,129,023...116,138,775
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin enables ISO (PMID:18317235) RGD PMID:18317235 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Gltp glycolipid transfer protein enables ISO (PMID:15287756), (PMID:15901739) RGD PMID:15287756 PMID:15901739 NCBI chr12:41,907,168...41,927,321
Ensembl chr12:41,907,144...41,927,319
JBrowse link
G Hmgb1 high mobility group box 1 IDA RGD PMID:11279268 RGD:734534 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hspa2 heat shock protein family A (Hsp70) member 2 enables ISO (MGI:1098020|PMID:9337084) RGD PMID:9337084 MGI:1098020 NCBI chr 6:95,128,504...95,131,281
Ensembl chr 6:95,128,350...95,131,287
JBrowse link
G Plekha8 pleckstrin homology domain containing A8 enables ISS
ISO
GO_REF:0000024
(PMID:17687330)
UniProt
RGD
PMID:17687330 GO_REF:0000024 NCBI chr 4:83,723,470...83,774,081
Ensembl chr 4:83,723,561...83,774,081
JBrowse link
G Sell selectin L IDA RGD PMID:7678958 RGD:5686288 NCBI chr13:76,416,969...76,436,444
Ensembl chr13:76,416,915...76,436,456
JBrowse link
ganglioside binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-GLY domain containing linker protein 3 enables ISO
ISS
(PMID:20052288)
GO_REF:0000024
RGD
UniProt
PMID:20052288 GO_REF:0000024 NCBI chr 1:85,547,170...85,563,187
Ensembl chr 1:85,547,206...85,563,184
JBrowse link
ganglioside GM1 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epdr1 ependymin related 1 enables ISO (PMID:30729188) RGD PMID:30729188 NCBI chr17:45,333,677...45,358,597
Ensembl chr17:45,333,956...45,358,594
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISO
ISS
(PMID:18411262)
GO_REF:0000024
RGD
UniProt
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
ganglioside GM2 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GM3 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GP1c binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GT1b binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mag myelin-associated glycoprotein enables ISS
ISO
IDA
GO_REF:0000024
(MGI:5822923|PMID:27922006)
PMID:8995428
UniProt
RGD
PMID:27922006 PMID:8995428 GO_REF:0000024 MGI:5822923, RGD:12050139 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISS
ISO
GO_REF:0000024
(PMID:18411262)
UniProt
RGD
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
glycosphingolipid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase IDA RGD PMID:15296737 RGD:2313559 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Il2 interleukin 2 IDA binds gangliosides GM1, GD1a, GD1b and GT1b with increased binding as the carbohydrate side chains increase in complexity RGD PMID:6609839 RGD:1600093 NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
JBrowse link
G Lama1 laminin subunit alpha 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lamb1 laminin subunit beta 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamc1 laminin subunit gamma 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IPI RGD PMID:8106508 RGD:2303724 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
GPI anchor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpep1 dipeptidase 1 enables ISO
ISS
(PMID:11139399), (PMID:11988094)
GO_REF:0000024
RGD
UniProt
PMID:11139399 PMID:11988094 GO_REF:0000024 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 contributes_to ISO (PMID:14660601) RGD PMID:14660601 NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484
JBrowse link
G Mppe1 metallophosphoesterase 1 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U contributes_to
enables
ISO
IEA
(PMID:12802054)
GO_REF:0000107
RGD
Ensembl
PMID:12802054 GO_REF:0000107 NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
JBrowse link
G Thy1 Thy-1 cell surface antigen enables IBA
IDA
PMID:21873635
PMID:16257296
GO_Central
UniProt
PMID:21873635 PMID:16257296 RGD:13792537, RGD:8554003 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
sulfatide binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin enables ISO (PMID:18317235) RGD PMID:18317235 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Cln6 CLN6, transmembrane ER protein enables ISO (PMID:18317235) RGD PMID:18317235 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360
JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor enables ISO CHEBI:18318 (PMID:29497057) RGD PMID:29497057 NCBI chr 8:107,500,856...107,551,595
Ensembl chr 8:107,548,352...107,551,438
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 enables ISO
ISS
(PMID:18317235)
GO_REF:0000024
RGD
UniProt
PMID:18317235 GO_REF:0000024 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Tpp1 tripeptidyl peptidase 1 enables ISO
ISS
(PMID:18317235)
GO_REF:0000024
RGD
UniProt
PMID:18317235 GO_REF:0000024 NCBI chr 1:160,097,984...160,104,108
Ensembl chr 1:160,096,833...160,104,129
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 enables ISO (PMID:31902528) RGD PMID:31902528 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19437
    binding 16664
      carbohydrate derivative binding 2130
        glycolipid binding 29
          GPI anchor binding + 5
          glycosphingolipid binding + 11
          sulfatide binding 6
paths to the root