Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in intraspecies interaction between organisms
go back to main search page
Accession:GO:0051703 term browser browse the term
Definition:Any process in which an organism has an effect on an organism of the same species.
Synonyms:exact_synonym: intraspecies interaction between organisms;   intraspecies interaction with other organisms


show annotations for term's descendants           Sort by:
 
negative regulation of single-species biofilm formation in or on host organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpifa1 BPI fold containing family A, member 1 ISO
IBA
ISS
(PMID:23499554)
(MGI:5484728|PMID:23499554)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23499554, PMID:21873635 GO_REF:0000024, MGI:5484728, RGD:13792537 NCBI chr 3:149,624,867...149,630,610
Ensembl chr 3:149,624,712...149,630,613
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,643,481...149,649,398
Ensembl chr 3:149,643,481...149,649,398
JBrowse link
G Ltf lactotransferrin ISO (PMID:12037568) RGD PMID:12037568 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
social behavior term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn1 ataxin 1 ISS
ISO
GO_REF:0000024
(MGI:5888926|PMID:28288114)
UniProt
RGD
PMID:28288114 GO_REF:0000024, MGI:5888926 NCBI chr17:19,160,986...19,533,814
Ensembl chr17:19,249,952...19,533,814
JBrowse link
G Atxn1l ataxin 1-like ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr19:41,932,356...41,939,456 JBrowse link
G Avp arginine vasopressin IMP RGD PMID:18786571 RGD:2301929 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP
IDA
PMID:12887422 RGD
UniProt
PMID:16154572, PMID:12887422 RGD:2300378, RGD:8553763 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:3055492 (MGI:3784949|PMID:16794820) RGD PMID:16794820 MGI:3784949 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 IEA
ISO
GO_REF:0000107
MGI:5604542|MGI:5698819 (MGI:5638841|PMID:24528488), (MGI:5770105|PMID:27042284)
Ensembl
RGD
PMID:24528488, PMID:27042284 GO_REF:0000107, MGI:5638841, MGI:5770105 NCBI chr 5:84,919,416...85,123,828
Ensembl chr 5:84,919,367...85,123,829
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 ISO MGI:3530648|MGI:6144040 (MGI:5792969|PMID:27602517) RGD PMID:27602517 MGI:5792969 NCBI chr15:28,612,932...28,672,574
Ensembl chr15:28,612,932...28,672,569
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO MGI:1926253 (MGI:3584096|PMID:12876201) RGD PMID:12876201 MGI:3584096 NCBI chr 2:189,088,570...189,096,785
Ensembl chr 2:189,088,570...189,096,785
JBrowse link
G Cic capicua transcriptional repressor ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr 1:82,135,440...82,163,007
Ensembl chr 1:82,151,669...82,163,005
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein ISO MGI:1856959 (MGI:3622022|PMID:12020865) RGD PMID:12020865 MGI:3622022 NCBI chr16:79,828,321...79,838,212
Ensembl chr16:79,828,324...79,838,212
JBrowse link
G Cntnap2 contactin associated protein 2 ISO (PMID:18179893), (PMID:19896112) RGD PMID:18179893, PMID:19896112 NCBI chr 4:74,700,539...77,025,463 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO (MGI:5576986|PMID:24487234) RGD PMID:24487234 MGI:5576986 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Dbh dopamine beta-hydroxylase IEP RGD PMID:15345906 RGD:5130765 NCBI chr 3:5,709,236...5,731,895
Ensembl chr 3:5,709,236...5,731,898
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISS
ISO
IEA
GO_REF:0000024
(MGI:5285520|PMID:20952458)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:20952458 GO_REF:0000024, GO_REF:0000107, MGI:5285520 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Drd1 dopamine receptor D1 IMP negative regulation RGD PMID:21557291 RGD:7248612 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:2137230 (MGI:1096243|PMID:9298901), (MGI:3605615|PMID:14960015) RGD PMID:9298901, PMID:14960015 MGI:1096243, MGI:3605615 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 ISO (MGI:3768180|PMID:17029989), (MGI:4820682|PMID:20347422), (MGI:5471212|PMID:23172145) RGD PMID:17029989, PMID:20347422, PMID:23172145 MGI:3768180, MGI:4820682, MGI:5471212 NCBI chr20:31,055,292...31,072,469
Ensembl chr20:31,055,789...31,072,469
JBrowse link
G En1 engrailed homeobox 1 ISO (MGI:3697962|PMID:17267560) RGD PMID:17267560 MGI:3697962 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:5315031|PMID:22411800) RGD PMID:22411800 MGI:5315031 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 ISO (MGI:3771408|PMID:17983671) RGD PMID:17983671 MGI:3771408 NCBI chr 1:113,034,251...113,265,364
Ensembl chr 1:112,976,770...113,265,364
JBrowse link
G Gad1 glutamate decarboxylase 1 ISO MGI:3762150 (MGI:5605217|PMID:24952328) RGD PMID:24952328 MGI:5605217 NCBI chr 3:56,861,440...56,902,139
Ensembl chr 3:56,861,396...56,902,157
JBrowse link
G Gnb1l G protein subunit beta 1 like ISO MGI:3530640 (MGI:3639368|PMID:16684884) RGD PMID:16684884 MGI:3639368 NCBI chr11:86,575,229...86,655,614
Ensembl chr11:86,577,339...86,655,602
JBrowse link
G Gng8 G protein subunit gamma 8 ISO MGI:5584308 (MGI:5582146|PMID:23836683) RGD PMID:23836683 MGI:5582146 NCBI chr 1:78,818,360...78,822,224
Ensembl chr 1:78,818,404...78,822,224
JBrowse link
G Grid1 glutamate ionotropic receptor delta type subunit 1 ISS
ISO
GO_REF:0000024
(MGI:5545960|PMID:22412961)
UniProt
RGD
PMID:22412961 GO_REF:0000024, MGI:5545960 NCBI chr16:11,170,831...11,932,197
Ensembl chr16:11,599,753...11,932,324
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEA
ISO
GO_REF:0000107
MGI:1928280 (MGI:1343743|PMID:10481908)
Ensembl
RGD
PMID:10481908 GO_REF:0000107, MGI:1343743 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Grp gastrin releasing peptide ISO (MGI:5887141|PMID:28280205) RGD PMID:28280205 MGI:5887141 NCBI chr18:61,563,458...61,576,818
Ensembl chr18:61,563,053...61,576,818
JBrowse link
G Grpr gastrin releasing peptide receptor IMP
ISO
ISS
(MGI:5887141|PMID:28280205)
GO_REF:0000024
RGD
UniProt
PMID:28280205, PMID:17097693 GO_REF:0000024, MGI:5887141, RGD:1641840 NCBI chr  X:32,746,259...32,786,266
Ensembl chr  X:32,745,873...32,786,359
JBrowse link
G Htt huntingtin ISO MGI:2177751 (MGI:1336581|PMID:10196365) RGD PMID:10196365 MGI:1336581 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Il1b interleukin 1 beta IMP RGD PMID:9831177 RGD:1626662 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Kalrn kalirin, RhoGEF kinase ISO MGI:4358076 (MGI:4355773|PMID:19625617) RGD PMID:19625617 MGI:4355773 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 ISO (MGI:4849330|PMID:21048139) RGD PMID:21048139 MGI:4849330 NCBI chr 7:130,430,588...130,440,838
Ensembl chr 7:130,431,213...130,440,703
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP
ISO
MGI:2137555|MGI:2158353|MGI:2176754 (MGI:3663583|PMID:16199017), (MGI:3794508|PMID:18321864) RGD PMID:16199017, PMID:18321864, PMID:18614683 MGI:3663583, MGI:3794508, RGD:12789706 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mkks McKusick-Kaufman syndrome ISO MGI:3526444 (MGI:3581923|PMID:15772095) RGD PMID:15772095 MGI:3581923 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:23027611 RGD:10041022 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nlgn2 neuroligin 2 IMP PMID:18550748 BHF-UCL PMID:18550748 RGD:8554527 NCBI chr10:56,431,586...56,444,847
Ensembl chr10:56,431,573...56,444,847
JBrowse link
G Nlgn3 neuroligin 3 IEA
ISO
ISS
GO_REF:0000107
MGI:3758949 (MGI:3758357|PMID:17823315), (MGI:5286761|PMID:21808020)
GO_REF:0000024
(PMID:12669065)
Ensembl
RGD
BHF-UCL
PMID:12669065, PMID:17823315, PMID:21808020 GO_REF:0000024, GO_REF:0000107, MGI:3758357, MGI:5286761 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Npas4 neuronal PAS domain protein 4 ISS
ISO
GO_REF:0000024
(MGI:5464058|PMID:23029555)
UniProt
RGD
PMID:23029555 GO_REF:0000024, MGI:5464058 NCBI chr 1:220,260,310...220,278,177
Ensembl chr 1:220,261,008...220,265,772
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:2176490 (MGI:2151063|PMID:11997145) RGD PMID:11997145 MGI:2151063 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Nrxn1 neurexin 1 ISO
IEA
(PMID:17034946), (PMID:18057082), (PMID:19896112)
GO_REF:0000107
RGD
Ensembl
PMID:17034946, PMID:18057082, PMID:19896112 GO_REF:0000107 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 ISO
IEA
(PMID:21424692)
GO_REF:0000107
RGD
Ensembl
PMID:21424692 GO_REF:0000107 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
G Nrxn3 neurexin 3 ISO UniProtKB:Q9HDB5|UniProtKB:Q9Y4C0 (PMID:22209245) RGD PMID:22209245 NCBI chr 6:112,133,204...114,069,589
Ensembl chr 6:112,133,204...114,067,564
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:17540347 RGD:2304134 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:17383105 RGD:2304140 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pcm1 pericentriolar material 1 ISO (MGI:5661286|PMID:25697395) RGD PMID:25697395 MGI:5661286 NCBI chr16:54,040,721...54,137,675
Ensembl chr16:54,040,721...54,137,660
JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase IEP RGD PMID:15345906 RGD:5130765 NCBI chr10:86,340,893...86,342,501
Ensembl chr10:86,340,940...86,342,858
JBrowse link
G Ptchd1 patched domain containing 1 ISO (MGI:5779981|PMID:27007844) RGD PMID:27007844 MGI:5779981 NCBI chr  X:42,558,912...42,610,430
Ensembl chr  X:42,558,931...42,614,242
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:3629385|PMID:16675393), (MGI:3832995|PMID:19208814) RGD PMID:16675393, PMID:19208814 MGI:3629385, MGI:3832995 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Reln reelin IEP RGD PMID:20035841 RGD:2317761 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Septin5 septin 5 ISS
ISO
GO_REF:0000024
(MGI:3839687|PMID:19240081), (MGI:5428355|PMID:22589251)
UniProt
RGD
PMID:19240081, PMID:22589251 GO_REF:0000024, MGI:3839687, MGI:5428355 NCBI chr11:86,516,377...86,522,169
Ensembl chr11:86,512,797...86,522,168
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 ISO (PMID:22503632)
(MGI:5086047|PMID:21695253)
RGD PMID:21695253, PMID:22503632 MGI:5086047 NCBI chr 1:100,297,137...100,344,377
Ensembl chr 1:100,297,152...100,344,377
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 ISO
ISS
(PMID:20473310)
(MGI:5432970|PMID:22699620)
GO_REF:0000024
RGD
BHF-UCL
PMID:20473310, PMID:22699620 GO_REF:0000024, MGI:5432970 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISS
ISO
IEA
GO_REF:0000024
MGI:5056336 (MGI:4948759|PMID:21423165), (MGI:5013997|PMID:21558424), (MGI:5285139|PMID:21167025)
GO_REF:0000107
(PMID:17173049), (PMID:21378602)
BHF-UCL
RGD
Ensembl
PMID:17173049, PMID:21167025, PMID:21378602, PMID:21423165, PMID:21558424 GO_REF:0000024, GO_REF:0000107, MGI:4948759, MGI:5013997, MGI:5285139 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO UniProtKB:O08586 (MGI:3832995|PMID:19208814) RGD PMID:19208814 MGI:3832995 NCBI chr10:63,153,656...63,188,377
Ensembl chr10:63,153,651...63,176,463
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179136 (MGI:3639368|PMID:16684884)
UniProt
RGD
PMID:16684884 GO_REF:0000024, MGI:3639368 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:15345906 RGD:5130765 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:20927644 RGD:11568683 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
G Ucn urocortin IDA negative regulation RGD PMID:16488545 RGD:5507822 NCBI chr 6:26,602,144...26,602,974
Ensembl chr 6:26,602,144...26,602,974
JBrowse link
G Ulk4 unc-51 like kinase 4 ISO MGI:4362969 (MGI:6120659|PMID:29391390) RGD PMID:29391390 MGI:6120659 NCBI chr 8:129,631,003...129,919,080
Ensembl chr 8:129,632,149...129,919,120
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO MGI:3531502 (MGI:3529744|PMID:15686477) RGD PMID:15686477 MGI:3529744 NCBI chr 1:235,352,513...235,813,597
Ensembl chr 1:235,653,121...235,813,030
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    biological process involved in intraspecies interaction between organisms 62
      agglutination involved in conjugation + 0
      flocculation + 0
      pollen tube adhesion 0
      pollen tube reception 0
      single-species biofilm formation + 3
      social behavior + 59
      socially cooperative development + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.