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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with symbiont
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Accession:GO:0051702 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:related_synonym: interaction with symbiont


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biological process involved in interaction with symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage specific DNA binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:10,605,568...10,629,828
Ensembl chr19:10,605,327...10,629,819
JBrowse link
G Fn1 fibronectin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:71,585,473...71,653,280
Ensembl chr 1:71,585,520...71,653,200
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within IGI (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chr 9:108,339,080...108,340,342
Ensembl chr 9:108,338,903...108,340,343
JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within IGI (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chr12:76,792,335...76,795,554
Ensembl chr12:76,792,333...76,795,554
JBrowse link
G Hspd1 heat shock protein 1 (chaperonin) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:55,077,833...55,088,243
Ensembl chr 1:55,077,835...55,088,243
JBrowse link
G Plg plasminogen involved_in ISO (PMID:12818429) CAFA PMID:12818429 NCBI chr17:12,378,609...12,419,384
Ensembl chr17:12,378,608...12,419,385
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:109,847,377...109,849,456
Ensembl chr 9:109,847,379...109,849,617
JBrowse link
G Cfhr1 complement factor H-related 1 involved_in ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:139,547,064...139,560,222
Ensembl chr 1:139,547,053...139,560,272
JBrowse link
G Defb47 defensin beta 47 involved_in ISO (PMID:28181499) UniProt PMID:28181499 NCBI chr14:62,992,375...63,001,180
Ensembl chr14:62,998,077...63,001,160
JBrowse link
G F2 coagulation factor II involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,612,397...91,636,457
Ensembl chr 2:91,625,320...91,636,414
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:22,951,072...22,961,659
Ensembl chr16:22,951,072...22,961,656
JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chr15:101,689,928...101,694,305
Ensembl chr15:101,689,910...101,694,307
JBrowse link
G Reg3g regenerating islet-derived 3 gamma involved_in IDA (MGI:5897756|PMID:16931762) UniProt PMID:16931762 MGI:5897756 NCBI chr 6:78,466,269...78,468,874
Ensembl chr 6:78,466,269...78,468,872
JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:156,144,153...156,145,794
Ensembl chr 2:156,144,039...156,145,797
JBrowse link
G Spag11b sperm associated antigen 11B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:19,140,759...19,143,010
Ensembl chr 8:19,140,759...19,143,010
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family, member 9 involved_in ISO
IMP
(MGI:5829544|PMID:27158904), (MGI:6508474|PMID:33548172), (MGI:6694416|PMID:23732773) MGI
UniProt
PMID:23732773 PMID:27158904 PMID:33548172 GO_REF:0000096 MGI:4834177 MGI:5829544 MGI:6508474 MGI:6694416 NCBI chr 2:26,352,187...26,360,945
Ensembl chr 2:26,352,176...26,360,918
JBrowse link
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 involved_in IMP (MGI:3526790|PMID:15653504), (MGI:6110065|PMID:29326275) UniProt PMID:15653504 PMID:29326275 MGI:3526790 MGI:6110065 NCBI chr 9:120,048,683...120,068,296
Ensembl chr 9:119,901,616...120,069,879
JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in IMP (MGI:6204559|PMID:26776522) UniProt PMID:26776522 MGI:6204559 NCBI chr 4:94,635,721...94,650,144
Ensembl chr 4:94,636,653...94,650,144
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in IMP (MGI:5641800|PMID:25757720) UniProt PMID:25757720 MGI:5641800 NCBI chr 5:21,662,901...21,701,622
Ensembl chr 5:21,662,901...21,701,396
JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A930009A15Rik RIKEN cDNA A930009A15 gene involved_in ISO (PMID:15670776) CACAO PMID:15670776 NCBI chr10:115,569,986...115,582,454
Ensembl chr10:115,569,986...115,582,448
JBrowse link
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:3611523|PMID:16177355)
(PMID:16020269)
MGI
CACAO
PMID:16020269 PMID:16177355 GO_REF:0000008 MGI:2154458 MGI:3611523 NCBI chr 9:109,847,377...109,849,456
Ensembl chr 9:109,847,379...109,849,617
JBrowse link
G Defa-rs10 defensin, alpha, related sequence 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa-rs12 defensin, alpha, related sequence 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa-rs2 defensin, alpha, related sequence 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa10 defensin, alpha, 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa11 defensin, alpha, 11 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa13 defensin, alpha, 13 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa15 defensin, alpha, 15 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa16 defensin, alpha, 16 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa20 defensin, alpha, 20 involved_in IDA (MGI:3510494|PMID:15297466) CACAO PMID:15297466 MGI:3510494 NCBI chr 8:21,509,258...21,510,237
Ensembl chr 8:21,509,258...21,510,237
JBrowse link
G Defa21 defensin, alpha, 21 involved_in ISO (PMID:9169780) CACAO PMID:9169780 NCBI chr 8:21,025,545...21,026,517
Ensembl chr 8:21,025,545...21,026,516
JBrowse link
G Defa24 defensin, alpha, 24 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,734,494...21,735,471
Ensembl chr 8:21,734,494...21,735,471
JBrowse link
G Defa26 defensin, alpha, 26 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,618,168...21,618,972
Ensembl chr 8:21,618,183...21,618,972
JBrowse link
G Defa27 defensin, alpha, 27 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,315,546...21,316,387
Ensembl chr 8:21,315,546...21,316,481
JBrowse link
G Defa28 defensin, alpha, 28 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,582,960...21,583,867
Ensembl chr 8:21,583,006...21,583,961
JBrowse link
G Defa30 defensin, alpha, 30 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,134,650...21,135,598
Ensembl chr 8:21,134,642...21,135,598
JBrowse link
G Defa34 defensin, alpha, 34 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,665,797...21,666,733
Ensembl chr 8:21,665,797...21,666,732
JBrowse link
G Defa35 defensin, alpha, 35 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,065,038...21,066,001
Ensembl chr 8:21,065,038...21,065,996
JBrowse link
G Defa4 defensin, alpha, 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa40 defensin, alpha, 40 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,249,715...21,250,553
Ensembl chr 8:21,249,754...21,250,556
JBrowse link
G Defa41 defensin, alpha, 41 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,201,604...21,202,446
Ensembl chr 8:21,201,561...21,202,539
JBrowse link
G Defa5 defensin, alpha, 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:21,297,394...21,298,375
Ensembl chr 8:21,297,439...21,298,375
JBrowse link
G Defa6 defensin, alpha, 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa7 defensin, alpha, 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa8 defensin, alpha, 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defa9 defensin, alpha, 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177
G Defb14 defensin beta 14 involved_in ISO (PMID:16436752) CACAO PMID:16436752 NCBI chr 8:19,160,244...19,195,309
Ensembl chr 8:19,194,357...19,195,212
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:125,161,852...125,166,467
Ensembl chr 6:125,161,715...125,166,467
JBrowse link
G Mbl1 mannose-binding lectin (protein A) 1 acts_upstream_of_or_within IGI (MGI:3577322|PMID:15148336) MGI PMID:15148336 MGI:3577322 NCBI chr14:41,151,456...41,163,904
Ensembl chr14:41,151,458...41,159,601
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 acts_upstream_of_or_within IGI (MGI:3577322|PMID:15148336) MGI PMID:15148336 MGI:3577322 NCBI chr19:30,232,906...30,239,687
Ensembl chr19:30,232,942...30,239,687
JBrowse link
G Pf4 platelet factor 4 involved_in ISO (PMID:23245326) UniProt PMID:23245326 NCBI chr 5:90,772,435...90,773,383
Ensembl chr 5:90,772,435...90,773,383
JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,910,458...131,936,321
Ensembl chr 1:131,910,534...131,936,321
JBrowse link
modulation by host of symbiont transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sap30 sin3 associated polypeptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:57,482,702...57,487,860
Ensembl chr 8:57,482,707...57,487,860
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,933,578...115,965,534
Ensembl chr11:115,933,282...115,966,725
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:103,434,189...103,440,245
Ensembl chr12:103,434,211...103,440,239
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein 8 involved_in IMP (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr 9:40,801,276...40,805,202
Ensembl chr 9:40,800,984...40,810,087
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:113,958,557...114,026,803
Ensembl chr 9:113,963,637...114,046,191
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Phb prohibitin involved_in IDA (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr11:95,666,957...95,680,773
Ensembl chr11:95,666,957...95,680,773
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,910,458...131,936,321
Ensembl chr 1:131,910,534...131,936,321
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome (prosome, macropain) 26S subunit, ATPase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,054,016...91,059,438
Ensembl chr 2:91,054,009...91,066,369
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Ptx3 pentraxin related gene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:82,101,845...82,103,399
Ensembl chr11:82,101,845...82,103,400
JBrowse link
G Ccl8 chemokine (C-C motif) ligand 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:82,115,185...82,116,799
Ensembl chr11:82,115,185...82,116,799
JBrowse link
G Ccnk cyclin K involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:108,179,308...108,203,359
Ensembl chr12:108,179,579...108,203,359
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 acts_upstream_of_or_within IMP (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Ddx3x DEAD box helicase 3, X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:13,280,496...13,293,988
Ensembl chr  X:13,280,970...13,294,052
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IDA (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr 2:118,388,583...118,475,234
Ensembl chr 2:118,388,618...118,475,234
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:10,840,359...12,063,370
Ensembl chr17:10,840,384...12,063,361
JBrowse link
G Vapa vesicle-associated membrane protein, associated protein A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:65,580,053...65,616,462
Ensembl chr17:65,578,327...65,613,555
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Ptx3 pentraxin related gene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 acts_upstream_of_or_within IMP
IDA
(MGI:1098064|PMID:9343248)
(MGI:3848729|PMID:19358828)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Crp C-reactive protein, pentraxin-related involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:172,698,056...172,699,966
Ensembl chr 1:172,698,055...172,833,031
JBrowse link
G Ltf lactotransferrin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:111,019,292...111,042,766
Ensembl chr 9:111,019,271...111,042,767
JBrowse link
G Mptx1 mucosal pentraxin 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:174,330,518...174,332,877
Ensembl chr 1:174,330,518...174,332,873
JBrowse link
G Mptx2 mucosal pentraxin 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:173,274,461...173,277,756
Ensembl chr 1:173,274,382...173,277,777
JBrowse link
G Ptx3 pentraxin related gene involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb vesicle-associated membrane protein, associated protein B and C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:32,196,272...32,284,743
Ensembl chr17:32,196,274...32,284,722
JBrowse link
G Ccl3 chemokine (C-C motif) ligand 3 involved_in ISO (PMID:10841574) UniProt PMID:10841574 NCBI chr11:83,647,843...83,649,378
Ensembl chr11:83,647,844...83,649,355
JBrowse link
G Ccl4 chemokine (C-C motif) ligand 4 involved_in ISO (PMID:10841574) UniProt PMID:10841574 NCBI chr11:83,648,624...83,664,683
Ensembl chr11:83,662,584...83,664,683
JBrowse link
G Ccl5 chemokine (C-C motif) ligand 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:83,525,778...83,530,518
Ensembl chr11:83,525,778...83,530,518
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,516,104...129,542,646
Ensembl chr 4:129,516,104...129,542,713
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:120,361,268...120,476,469
Ensembl chr10:120,361,275...120,476,469
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:75,629,067...75,648,865
Ensembl chr11:75,630,988...75,648,871
JBrowse link
G Jun jun proto-oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:95,049,036...95,052,222
Ensembl chr 4:95,049,034...95,052,222
JBrowse link
G Pou2f3 POU domain, class 2, transcription factor 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:43,123,927...43,205,755
Ensembl chr 9:43,123,939...43,210,369
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:77,265,494...77,286,432
Ensembl chr 5:77,265,491...77,286,432
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Tfap4 transcription factor AP4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:4,544,661...4,560,762
Ensembl chr16:4,544,661...4,559,854
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:32,510,264...32,520,833
Ensembl chr 3:32,510,259...32,520,833
JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 myeloid differentiation primary response gene 88 acts_upstream_of_or_within IGI (MGI:6478086|PMID:22419116) MGI PMID:22419116 MGI:6478086 NCBI chr 9:119,335,934...119,340,018
Ensembl chr 9:119,335,934...119,341,411
JBrowse link
G Scnn1b sodium channel, nonvoltage-gated 1 beta acts_upstream_of_or_within IGI
IDA
(MGI:6478086|PMID:22419116) MGI PMID:22419116 MGI:6478086 NCBI chr 7:121,865,038...121,918,728
Ensembl chr 7:121,865,038...121,918,514
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed acts_upstream_of_or_within IMP (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr10:79,886,312...79,888,216
Ensembl chr10:79,886,247...79,888,215
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within IMP (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr 5:134,220,053...134,229,628
Ensembl chr 5:134,220,053...134,229,625
JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:79,886,312...79,888,216
Ensembl chr10:79,886,247...79,888,215
JBrowse link
G F2 coagulation factor II involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,612,397...91,636,457
Ensembl chr 2:91,625,320...91,636,414
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 acts_upstream_of_or_within
involved_in
IGI
IBA
(MGI:5471912|PMID:23241959)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:23241959 MGI:5471912 MGI:6201960 NCBI chr17:48,232,713...48,246,927
Ensembl chr17:48,232,768...48,246,924
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 acts_upstream_of_or_within
involved_in
IGI
IBA
(MGI:5471912|PMID:23241959)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:23241959 MGI:5471912 MGI:6201960 NCBI chr17:48,247,677...48,258,848
Ensembl chr17:48,247,777...48,258,841
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within IMP (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chr 9:107,563,255...107,566,108
Ensembl chr 9:107,563,255...107,566,112
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G acts_upstream_of_or_within IMP (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr14:56,099,885...56,102,574
Ensembl chr14:56,099,881...56,102,574
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within IMP (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr 5:134,220,053...134,229,628
Ensembl chr 5:134,220,053...134,229,625
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 acts_upstream_of_or_within IMP (MGI:6453663|PMID:30248149) MGI PMID:30248149 MGI:6453663 NCBI chr 7:140,920,902...140,929,192
Ensembl chr 7:140,920,902...140,929,192
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein 8 involved_in IMP (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr 9:40,801,276...40,805,202
Ensembl chr 9:40,800,984...40,810,087
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,910,458...131,936,321
Ensembl chr 1:131,910,534...131,936,321
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:66,060,169...66,066,629
Ensembl chr 9:66,060,222...66,066,623
JBrowse link
G Stom stomatin involved_in IMP (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chr 2:35,313,990...35,337,009
Ensembl chr 2:35,313,986...35,336,976
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:152,293,826...152,313,994
Ensembl chr 2:152,293,828...152,313,996
JBrowse link
G Vapa vesicle-associated membrane protein, associated protein A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:65,580,053...65,616,462
Ensembl chr17:65,578,327...65,613,555
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:44,827,730...44,889,720
Ensembl chr18:44,827,746...44,889,724
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr 9:69,453,683...69,491,792
Ensembl chr 9:69,453,620...69,491,795
JBrowse link
G Apoe apolipoprotein E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:19,696,244...19,701,310
Ensembl chr 7:19,696,109...19,699,188
JBrowse link
G Cav2 caveolin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:17,281,185...17,289,130
Ensembl chr 6:17,281,185...17,289,115
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 acts_upstream_of_or_within IMP (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Cfl1 cofilin 1, non-muscle involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:5,490,455...5,494,031
Ensembl chr19:5,490,455...5,495,201
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IGI (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr18:61,105,572...61,131,139
Ensembl chr18:61,100,598...61,132,149
JBrowse link
G Ifng interferon gamma involved_in IGI (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr10:118,441,046...118,445,894
Ensembl chr10:118,441,046...118,445,892
JBrowse link
G Igf2r insulin-like growth factor 2 receptor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:12,682,406...12,769,706
Ensembl chr17:12,682,406...12,769,664
JBrowse link
G Pcx pyruvate carboxylase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:4,510,472...4,621,752
Ensembl chr19:4,510,472...4,621,752
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:66,060,169...66,066,629
Ensembl chr 9:66,060,222...66,066,623
JBrowse link
G Zfp141 zinc finger protein 141 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:42,473,386...42,505,778
Ensembl chr 7:42,473,386...42,505,740
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:17,281,185...17,289,130
Ensembl chr 6:17,281,185...17,289,115
JBrowse link
G Pcx pyruvate carboxylase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:4,510,472...4,621,752
Ensembl chr19:4,510,472...4,621,752
JBrowse link
G Vapa vesicle-associated membrane protein, associated protein A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:65,580,053...65,616,462
Ensembl chr17:65,578,327...65,613,555
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
G Zfp141 zinc finger protein 141 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:42,473,386...42,505,778
Ensembl chr 7:42,473,386...42,505,740
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:15,704,967...15,772,612
Ensembl chr17:15,704,967...15,772,610
JBrowse link
G Ctdp1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:80,407,959...80,478,739
Ensembl chr18:80,407,959...80,469,695
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:81,586,209...81,652,077
Ensembl chr15:81,585,351...81,652,077
JBrowse link
G Fkbp8 FK506 binding protein 8 involved_in ISO (PMID:26748656) AgBase PMID:26748656 NCBI chr 8:70,527,721...70,535,328
Ensembl chr 8:70,527,724...70,535,328
JBrowse link
G Hpn hepsin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:31,098,725...31,115,326
Ensembl chr 7:31,098,725...31,115,290
JBrowse link
G Jun jun proto-oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:95,049,036...95,052,222
Ensembl chr 4:95,049,034...95,052,222
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:131,110,297...131,224,357
Ensembl chr 3:131,110,471...131,224,356
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,910,458...131,936,321
Ensembl chr 1:131,910,534...131,936,321
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:32,036,162...32,062,865
Ensembl chr17:32,036,100...32,062,865
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:21,616,106...21,704,230
Ensembl chr 9:21,616,169...21,704,230
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:75,896,769...75,921,614
Ensembl chr10:75,896,769...75,921,617
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:87,449,910...87,472,299
Ensembl chr12:87,449,075...87,472,274
JBrowse link
G Sp1 trans-acting transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:102,406,316...102,436,404
Ensembl chr15:102,406,143...102,436,404
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:27,901,122...27,909,343
Ensembl chr17:27,901,122...27,909,844
JBrowse link
G Tfap4 transcription factor AP4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:4,544,661...4,560,762
Ensembl chr16:4,544,661...4,559,854
JBrowse link
G Zfp639 zinc finger protein 639 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:32,510,264...32,520,833
Ensembl chr 3:32,510,259...32,520,833
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:24,915,207...24,927,470
Ensembl chr10:24,915,221...24,927,484
JBrowse link
G Cxcl1 chemokine (C-X-C motif) ligand 1 involved_in IDA (MGI:5586806|PMID:10725737) UniProt PMID:10725737 MGI:5586806 NCBI chr 5:90,891,245...90,893,121
Ensembl chr 5:90,891,241...90,893,115
JBrowse link
G Pomc pro-opiomelanocortin-alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:3,954,945...3,960,643
Ensembl chr12:3,954,951...3,960,642
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 coagulation factor II (thrombin) receptor-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:95,511,718...95,525,240
Ensembl chr13:95,511,732...95,525,227
JBrowse link
programmed cell death induced by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak2 Janus kinase 2 acts_upstream_of_or_within IDA (MGI:5009182|PMID:12426001) MGI PMID:12426001 MGI:5009182 NCBI chr19:29,251,803...29,313,095
Ensembl chr19:29,251,828...29,313,080
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl5 chemokine (C-X-C motif) ligand 5 acts_upstream_of_or_within IMP (MGI:4819434|PMID:20643340) MGI PMID:20643340 MGI:4819434 NCBI chr 5:90,759,298...90,761,625
Ensembl chr 5:90,759,360...90,761,624
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28611
    biological process involved in interspecies interaction between organisms 2020
      biological process involved in symbiotic interaction 317
        biological process involved in interaction with symbiont 129
          acquisition of nutrients from symbiont + 0
          detection of symbiont + 0
          killing by host of symbiont cells + 54
          lectin-induced modified bacterial internalization 0
          modulation by host of symbiont process + 68
          programmed cell death induced by symbiont + 1
          translocation of molecules into symbiont + 0
paths to the root