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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with symbiont
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Accession:GO:0051702 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:related_synonym: interaction with symbiont


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biological process involved in interaction with symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Fn1 fibronectin 1 involved_in ISO (PMID:12167537), (PMID:12421310), (PMID:19429745) CAFA PMID:12167537 PMID:12421310 PMID:19429745 NCBI chrNW_004955457:629,599...694,948
Ensembl chrNW_004955457:629,518...696,975
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within ISO (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chrNW_004955466:4,983,532...4,987,780
Ensembl chrNW_004955466:4,984,631...4,987,457
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:20507888) CAFA PMID:20507888 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419
JBrowse link
G Plg plasminogen involved_in ISO (PMID:12818429) CAFA PMID:12818429 NCBI chrNW_004955439:20,317,814...20,366,724
Ensembl chrNW_004955439:20,317,552...20,366,475
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G Hrg histidine rich glycoprotein involved_in ISO (PMID:18797515) UniProt PMID:18797515 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chrNW_004955547:2,902,962...2,907,670 JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) UniProt PMID:22083756 NCBI chrNW_004955422:25,757,558...25,760,054
Ensembl chrNW_004955422:25,757,558...25,759,769
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family member 9 involved_in ISO (PMID:33548172)
(MGI:5829544|PMID:27158904), (MGI:6508474|PMID:33548172), (MGI:6694416|PMID:23732773)
UniProt PMID:23732773 PMID:27158904 PMID:33548172 MGI:5829544 MGI:6508474 MGI:6694416 NCBI chrNW_004955513:4,350,873...4,359,345
Ensembl chrNW_004955513:4,350,147...4,359,345
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:3526790|PMID:15653504), (MGI:6110065|PMID:29326275) UniProt PMID:15653504 PMID:29326275 MGI:3526790 MGI:6110065 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in ISO (MGI:6204559|PMID:26776522) UniProt PMID:26776522 MGI:6204559 NCBI chrNW_004955472:7,841,459...7,850,906
Ensembl chrNW_004955472:7,841,322...7,852,597
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D involved_in ISO (MGI:5641800|PMID:25757720) UniProt PMID:25757720 MGI:5641800 NCBI chrNW_004955410:8,217,684...8,233,302
Ensembl chrNW_004955410:8,220,400...8,247,486
JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in
ISO (MGI:3611523|PMID:16177355)
(PMID:16177355)
(PMID:16020269)
MGI
CACAO
PMID:16020269 PMID:16177355 MGI:3611523 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Dcd dermcidin involved_in ISO (PMID:15670776) CACAO PMID:15670776 NCBI chrNW_004955458:1,875,244...1,879,434 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) UniProt PMID:22832495 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Mbl2 mannose binding lectin 2 acts_upstream_of_or_within ISO (MGI:3577322|PMID:15148336) MGI PMID:15148336 MGI:3577322 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006
JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
modulation by host of symbiont transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sap30 Sin3A associated protein 30 involved_in ISO (PMID:21221920) UniProt PMID:21221920 NCBI chrNW_004955403:33,633,028...33,639,271
Ensembl chrNW_004955403:33,633,236...33,638,983
JBrowse link
G Sap30bp SAP30 binding protein involved_in ISO (PMID:21221920) UniProt PMID:21221920 NCBI chrNW_004955506:6,535,566...6,574,690
Ensembl chrNW_004955506:6,535,566...6,575,624
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:15893726) UniProt PMID:15893726 NCBI chrNW_004955421:512,197...617,524
Ensembl chrNW_004955421:512,158...617,524
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290 PMID:8419915 NCBI chrNW_004955422:837,934...843,161
Ensembl chrNW_004955422:837,573...845,341
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnk cyclin K involved_in ISO (PMID:21555514) CACAO PMID:21555514 NCBI chrNW_004955438:20,826,818...20,850,496
Ensembl chrNW_004955438:20,835,825...20,849,999
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) AgBase PMID:25244949 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Zbed1 zinc finger BED-type containing 1 involved_in ISO (PMID:25210186) UniProt PMID:25210186 NCBI chrNW_004955499:1,484,850...1,487,143 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:23355615) UniProt PMID:23355615 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
(MGI:3848729|PMID:19358828)
MGI PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12522210) AgBase PMID:12522210 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:17690245) FlyBase PMID:17690245 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10841574) UniProt PMID:10841574 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16540471) UniProt PMID:16540471 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) UniProt PMID:18774950 NCBI chrNW_004955481:1,651,422...1,674,402
Ensembl chrNW_004955481:1,651,902...1,673,893
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Pou2f3 POU class 2 homeobox 3 involved_in ISO (PMID:14645924) UniProt PMID:14645924 NCBI chrNW_004955412:21,261,389...21,339,602
Ensembl chrNW_004955412:21,260,993...21,342,584
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:14645924), (PMID:16540471) UniProt PMID:14645924 PMID:16540471 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (MGI:6478086|PMID:22419116) MGI PMID:22419116 MGI:6478086 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Scnn1b sodium channel epithelial 1 beta subunit acts_upstream_of_or_within ISO (MGI:6478086|PMID:22419116) MGI PMID:22419116 MGI:6478086 NCBI chrNW_004955493:1,937,507...1,956,248
Ensembl chrNW_004955493:1,904,220...1,956,303
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chrNW_004955456:13,353,780...13,363,956
Ensembl chrNW_004955456:13,354,011...13,363,891
JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2 coagulation factor II, thrombin involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chrNW_004955532:2,128,430...2,131,235
Ensembl chrNW_004955532:2,128,430...2,131,235
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chrNW_004955456:13,353,780...13,363,956
Ensembl chrNW_004955456:13,354,011...13,363,891
JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within ISO (MGI:6453663|PMID:30248149) MGI PMID:30248149 MGI:6453663 NCBI chrNW_004955476:11,755,489...11,762,781 JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chrNW_004955419:6,642,807...6,673,407
Ensembl chrNW_004955419:6,643,012...6,675,513
JBrowse link
G Tbc1d20 TBC1 domain family member 20 involved_in ISO (PMID:17686842) AgBase PMID:17686842 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO (PMID:21559518) AgBase PMID:21559518 NCBI chrNW_004955408:33,380,822...33,448,188
Ensembl chrNW_004955408:33,381,023...33,446,239
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:25122793) AgBase PMID:25122793 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Igf2r insulin like growth factor 2 receptor involved_in ISO (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chrNW_004955439:20,754,915...20,874,759
Ensembl chrNW_004955439:20,752,855...20,851,281
JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO (PMID:25297984) CACAO PMID:25297984 NCBI chrNW_004955418:14,200,618...14,268,361
Ensembl chrNW_004955418:14,200,617...14,268,361
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 involved_in ISO (PMID:15723517) CAFA PMID:15723517 NCBI chrNW_004955402:62,817,822...62,914,250
Ensembl chrNW_004955402:62,817,974...62,914,276
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO (PMID:26748656) AgBase PMID:26748656 NCBI chrNW_004955524:3,037,825...3,044,296
Ensembl chrNW_004955524:3,036,953...3,044,296
JBrowse link
G Hpn hepsin involved_in ISO (PMID:15614436) UniProt PMID:15614436 NCBI chrNW_004955468:4,384,630...4,399,881
Ensembl chrNW_004955468:4,384,630...4,400,379
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:7657162) UniProt PMID:7657162 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:26311876) UniProt PMID:26311876 NCBI chrNW_004955407:38,553,866...38,577,547
Ensembl chrNW_004955407:38,553,814...38,577,465
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955455:8,420,263...8,457,105
Ensembl chrNW_004955455:8,415,839...8,457,097
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15905409)
(PMID:19818711)
UniProt PMID:15905409 PMID:19818711 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Sp1 Sp1 transcription factor involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO (PMID:9108034) UniProt PMID:9108034 NCBI chrNW_004955437:2,908,939...2,916,154
Ensembl chrNW_004955437:2,908,939...2,916,154
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:15546957) UniProt PMID:15546957 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972
JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chrNW_004955469:7,217,233...7,220,401
Ensembl chrNW_004955469:7,217,363...7,220,386
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) UniProt PMID:21501162 NCBI chrNW_004955425:24,050,901...24,054,039 JBrowse link
programmed cell death induced by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5009182|PMID:12426001) MGI PMID:12426001 MGI:5009182 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11978
    biological process involved in interspecies interaction between organisms 1181
      biological process involved in symbiotic interaction 202
        biological process involved in interaction with symbiont 82
          acquisition of nutrients from symbiont + 0
          detection of symbiont + 0
          killing by host of symbiont cells + 16
          lectin-induced modified bacterial internalization 0
          modulation by host of symbiont process + 59
          programmed cell death induced by symbiont + 1
          translocation of molecules into symbiont + 0
paths to the root