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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with host
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Accession:GO:0051701 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:exact_synonym: interaction with host
 narrow_synonym: growth of symbiont in host;   growth of symbiont in host cell;   growth of symbiont in host organelle;   growth of symbiont in host vacuole
 alt_id: GO:0044112;   GO:0044116;   GO:0044117;   GO:0044119;   GO:0044121;   GO:0044123;   GO:0044125



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biological process involved in interaction with host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGLYRP1 peptidoglycan recognition protein 1 acts_upstream_of_or_within ISO (MGI:5297102|PMID:20709292) MGI PMID:20709292 MGI:5297102 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242
JBrowse link
G PGLYRP2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (MGI:5297102|PMID:20709292) MGI PMID:20709292 MGI:5297102 NCBI chr20:46,724,906...46,730,227
Ensembl chr20:46,726,224...46,730,321
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr24:17,636,143...17,667,791
Ensembl chr24:17,636,026...17,666,854
JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPCN1 two pore segment channel 1 involved_in ISO (MGI:6716961|PMID:25722412)
(PMID:25722412)
UniProt PMID:25722412 MGI:6716961 NCBI chr26:10,599,898...10,662,269
Ensembl chr26:10,599,780...10,660,767
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (PMID:25722412)
(MGI:6716961|PMID:25722412)
UniProt PMID:25722412 MGI:6716961 NCBI chr18:48,956,833...48,984,499
Ensembl chr18:48,957,249...48,984,564
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16081529), (PMID:18562523) UniProt PMID:16081529 PMID:18562523 NCBI chr 1:72,215,774...72,219,093 JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) UniProt PMID:24310610 MGI:5544501 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G PHB2 prohibitin 2 involved_in ISO (PMID:32276428) UniProt PMID:32276428 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 involved_in ISO (PMID:33827113) UniProt PMID:33827113 NCBI chr27:8,882,691...9,067,057
Ensembl chr27:8,884,062...9,066,934
JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,204,003...38,250,771
Ensembl chr27:38,204,003...38,250,771
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLT1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) UniProt PMID:18647839 NCBI chr 1:48,058,804...48,066,389
Ensembl chr 1:48,058,804...48,066,609
JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
mitigation of host defenses by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) MGI PMID:28189564 MGI:5898166 NCBI chr 2:69,025,409...69,078,635
Ensembl chr 2:69,030,228...69,077,912
JBrowse link
modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNIP1 TNFAIP3 interacting protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:58,150,734...58,200,158
Ensembl chr 4:58,149,882...58,199,644
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G RRAGA Ras related GTP binding A involved_in ISO (PMID:8995684) UniProt PMID:8995684 NCBI chr11:38,886,990...38,888,634
Ensembl chr11:38,886,397...38,888,184
JBrowse link
G RXRA retinoid X receptor alpha involved_in ISO (PMID:11915042) UniProt PMID:11915042 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:1247599 RGD:2317429 NCBI chr 7:67,487,927...67,497,747
Ensembl chr 7:67,487,927...67,497,747
JBrowse link
G VAPB VAMP associated protein B and C involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTRK3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:11175319 RGD:2325644 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024
JBrowse link
negative regulation by symbiont of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINB9 serpin family B member 9 involved_in ISO (PMID:22090449) UniProt PMID:22090449 NCBI chr35:3,186,209...3,200,894
Ensembl chr35:3,190,543...3,199,690
JBrowse link
negative regulation of cytolysis by symbiont of host cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC486523 keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chr27:2,609,414...2,623,810 JBrowse link
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGAV integrin subunit alpha V involved_in ISO (PMID:10570297) BHF-UCL PMID:10570297 NCBI chr36:28,815,215...28,890,569
Ensembl chr36:28,804,013...28,887,430
JBrowse link
G LOC486523 keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chr27:2,609,414...2,623,810 JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 involved_in ISO (PMID:12200142) UniProt PMID:12200142 NCBI chr10:20,498,097...20,564,776
Ensembl chr10:20,498,567...20,627,836
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820
JBrowse link
G FCN2 ficolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,868,942...50,876,001
Ensembl chr 9:50,868,973...50,875,792
JBrowse link
G FCN3 ficolin 3 involved_in ISO (PMID:22851708) UniProt PMID:22851708
G GSN gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5780029|PMID:25738301)
GO_Central
MGI
PMID:21873635 PMID:25738301 MGI:5780029 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)
UniProt PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr13:36,926,776...36,930,265
Ensembl chr13:36,925,980...36,974,979
JBrowse link
G MID2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563
JBrowse link
G PTX3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819
JBrowse link
G SNX3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chr12:65,252,175...65,294,620
Ensembl chr12:65,252,175...65,294,611
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr35:26,349,624...26,357,002
Ensembl chr35:26,350,125...26,356,592
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:26,495,628...26,509,445
Ensembl chr34:26,497,607...26,498,821
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G ATG7 autophagy related 7 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:16888103), (PMID:28389568) UniProt PMID:16888103 PMID:28389568 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617
JBrowse link
G LOC606863 immunity-related GTPase family M protein-like involved_in ISO (MGI:3656111|PMID:16888103) UniProt PMID:16888103 MGI:3656111 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr 5:40,355,070...40,437,758
Ensembl chr 5:40,354,263...40,435,747
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAD BCL2 associated agonist of cell death involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057092|PMID:15231831) Ensembl
MGI
PMID:15231831 GO_REF:0000107 MGI:3057092 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405
JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chr17:35,619,804...35,665,782
Ensembl chr17:35,619,582...35,664,587
JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr20:42,293,288...42,297,952
Ensembl chr20:42,294,996...42,297,952
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061
JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,204,003...38,250,771
Ensembl chr27:38,204,003...38,250,771
JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151
JBrowse link
G HLA-DRB1 MHC class II DLA DRB1 beta chain involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr12:2,151,409...2,164,564 JBrowse link
G LGALS1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr10:26,932,351...26,935,580
Ensembl chr10:26,932,301...26,935,646
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr 9:427,827...436,880
Ensembl chr 9:427,830...436,064
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr31:35,933,082...35,968,732 JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) UniProt PMID:32404436 NCBI chr 5:15,575,068...15,609,819
Ensembl chr 5:15,575,338...15,610,190
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM21 tripartite motif containing 21 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) UniProt PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr15:6,583,519...6,674,868
Ensembl chr15:6,583,488...6,675,579
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr37:16,537,095...16,620,427
Ensembl chr37:16,541,562...16,619,554
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr18:48,956,833...48,984,499
Ensembl chr18:48,957,249...48,984,564
JBrowse link
regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
G EXOC2 exocyst complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:859,158...1,084,228
Ensembl chr35:859,837...1,084,228
JBrowse link
G EXOC7 exocyst complex component 7 involved_in ISO (PMID:20579884) AgBase PMID:20579884 NCBI chr 9:4,538,017...4,554,341
Ensembl chr 9:4,537,944...4,554,328
JBrowse link
G FUCA2 alpha-L-fucosidase 2 involved_in ISO (PMID:19666478) UniProt PMID:19666478 NCBI chr 1:35,028,152...35,091,376
Ensembl chr 1:34,999,482...35,043,229
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:70,137,232...70,387,797
Ensembl chr12:70,140,802...70,388,174
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754
JBrowse link
G TRIM68 tripartite motif containing 68 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:26,982,173...26,992,162
Ensembl chr21:26,982,876...26,989,144
JBrowse link
G TRIML2 tripartite motif family like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:42,984,204...43,000,037
Ensembl chr16:42,984,303...43,000,051
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAD BCL2 associated agonist of cell death involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057092|PMID:15231831) Ensembl
MGI
PMID:15231831 GO_REF:0000107 MGI:3057092 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405
JBrowse link
G BCL2L1 BCL2 like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15231831) MGI
Ensembl
PMID:15231831 GO_REF:0000107 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 involved_in ISO (PMID:23290079) CACAO PMID:23290079 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:9630249 RGD:10045968 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130
JBrowse link
G INSR insulin receptor involved_in ISO (PMID:17001305) BHF-UCL PMID:17001305 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:20000122 RGD:2325807 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:16256070 RGD:7207780 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
translocation of peptides or proteins into host cell cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCP1 t-complex 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5492256|PMID:23716698) Ensembl
MGI
PMID:23716698 GO_REF:0000107 MGI:5492256 NCBI chr 1:49,029,260...49,038,023
Ensembl chr 1:49,029,282...49,038,020
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,405,322...99,408,257
Ensembl chr 1:99,405,337...99,410,163
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr17:38,600,793...38,658,368 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr29:28,839,459...28,865,793
Ensembl chr29:28,839,516...28,865,023
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959)
(MGI:5619479|PMID:17940959)
UniProt PMID:16193069 PMID:17940959 MGI:5619479 NCBI chr 5:80,327,059...80,340,380 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in ISO (PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620) UniProt PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 NCBI chr  X:11,798,839...11,839,591
Ensembl chr  X:11,798,839...11,900,594
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:43,569,658...43,617,113
Ensembl chr23:43,614,035...43,616,238
JBrowse link
G ANPEP alanyl aminopeptidase, membrane involved_in IEA GOC GO_REF:0000108 NCBI chr 3:52,764,418...52,779,516
Ensembl chr 3:52,764,418...52,779,746
JBrowse link
G AVP arginine vasopressin involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr24:18,183,057...18,184,827
Ensembl chr24:18,183,057...18,184,883
JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr38:2,440,574...2,446,037
Ensembl chr38:2,440,615...2,446,037
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:24623090) FlyBase PMID:24623090 NCBI chr20:52,517,759...52,542,085
Ensembl chr20:52,518,036...52,520,942
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G CLDN1 claudin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr34:22,303,058...22,319,101
Ensembl chr34:22,303,850...22,319,033
JBrowse link
G CLDN6 claudin 6 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:38,168,793...38,171,827
Ensembl chr 6:38,170,608...38,171,273
JBrowse link
G CLDN9 claudin 9 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:38,172,035...38,174,089
Ensembl chr 6:38,172,550...38,173,203
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,476,162...52,480,341
Ensembl chr20:52,476,200...52,479,930
JBrowse link
G CLEC5A C-type lectin domain containing 5A involved_in IEA GOC GO_REF:0000108 NCBI chr16:7,242,424...7,269,986
Ensembl chr16:7,243,018...7,269,418
JBrowse link
G CTSB cathepsin B involved_in ISO (MGI:5640952|PMID:15831716) CACAO PMID:15831716 MGI:5640952 NCBI chr25:26,048,237...26,056,570
Ensembl chr25:26,048,253...26,055,801
JBrowse link
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) UniProt PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G DAG1 dystroglycan 1 involved_in IEA GOC GO_REF:0000108 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540
JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) UniProt PMID:15650194 NCBI chr33:5,368,509...5,380,024
Ensembl chr33:5,396,083...5,397,165
Ensembl chr33:5,396,083...5,397,165
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,148,566...50,167,422
Ensembl chr18:50,148,598...50,167,428
JBrowse link
G HYAL2 hyaluronidase 2 ISO facilitates RGD PMID:12584308 RGD:633153 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130
JBrowse link
G ITGAV integrin subunit alpha V involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr36:28,815,215...28,890,569
Ensembl chr36:28,804,013...28,887,430
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr34:16,092,172...16,126,563 JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
CACAO PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr 7:64,764,941...64,802,507
Ensembl chr 7:64,760,121...64,802,902
JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483
JBrowse link
G PHB prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722
JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr24:17,636,143...17,667,791
Ensembl chr24:17,636,026...17,666,854
JBrowse link
G SLC3A2 solute carrier family 3 member 2 involved_in ISO (PMID:30341327) UniProt PMID:30341327 NCBI chr18:53,810,468...53,819,021
Ensembl chr18:53,810,398...53,819,021
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,714,418...29,719,035
Ensembl chr21:29,714,557...29,719,033
JBrowse link
G UVRAG UV radiation resistance associated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr21:22,505,968...22,821,027
Ensembl chr21:22,507,162...22,820,824
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr17:39,497,628...39,501,734
Ensembl chr17:39,497,785...39,501,739
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr24:18,401,440...18,424,605
Ensembl chr24:18,399,572...18,424,510
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr30:8,027,877...8,036,773
Ensembl chr30:8,027,128...8,036,153
JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:14,165,608...14,379,822
Ensembl chr 7:14,165,608...14,379,822
JBrowse link
G ZNF639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chr34:12,767,067...12,775,995
Ensembl chr34:12,766,681...12,775,792
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:12,479,680...12,525,330
Ensembl chr20:12,481,860...12,525,499
JBrowse link
viral mRNA export from host cell nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chr 9:398,207...402,787
Ensembl chr 9:399,072...402,721
JBrowse link
G DDX39B DExD-box helicase 39B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,032,377...1,044,465
Ensembl chr12:1,032,368...1,044,492
JBrowse link
G THOC1 THO complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:67,082,100...67,136,592
Ensembl chr 7:67,082,231...67,136,525
JBrowse link
G THOC2 THO complex 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,087,209...95,217,450
Ensembl chr  X:95,095,711...95,199,747
JBrowse link
G THOC3 THO complex 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,130,944...37,151,479
Ensembl chr 4:37,057,940...37,199,448
Ensembl chr 4:37,057,940...37,199,448
JBrowse link
G THOC5 THO complex 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:22,748,857...22,785,288
Ensembl chr26:22,748,895...22,784,143
JBrowse link
G THOC6 THO complex 6 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chr 6:38,161,506...38,164,287
Ensembl chr 6:38,161,474...38,164,402
JBrowse link
G THOC7 THO complex 7 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chr20:27,367,628...27,390,868
Ensembl chr20:27,382,568...27,390,235
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IST1 IST1 factor associated with ESCRT-III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,660,033...77,693,831
Ensembl chr 5:77,660,081...77,692,396
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chr20:2,704,716...2,776,518
Ensembl chr20:2,704,752...2,826,636
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13875
    biological process involved in interspecies interaction between organisms 1434
      biological process involved in symbiotic interaction 224
        biological process involved in interaction with host 132
          acquisition of nutrients from host + 0
          killing by symbiont of host cells + 4
          modulation by symbiont of host process + 28
          movement in host environment + 93
          response to host + 1
          symbiont intracellular protein transport in host + 2
          translocation of molecules into host + 9
paths to the root