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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with host
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Accession:GO:0051701 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:exact_synonym: interaction with host
 narrow_synonym: growth of symbiont in host;   growth of symbiont in host cell;   growth of symbiont in host organelle;   growth of symbiont in host vacuole
 alt_id: GO:0044112;   GO:0044116;   GO:0044117;   GO:0044119;   GO:0044121;   GO:0044123;   GO:0044125


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biological process involved in interaction with host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 acts_upstream_of_or_within ISO (MGI:5297102|PMID:20709292) MGI PMID:20709292 MGI:5297102 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO (MGI:5297102|PMID:20709292) MGI PMID:20709292 MGI:5297102 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO (MGI:5297102|PMID:20709292) MGI PMID:20709292 MGI:5297102 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632
JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpcn1 two pore segment channel 1 involved_in ISO (PMID:25722412)
(MGI:6716961|PMID:25722412)
UniProt PMID:25722412 MGI:6716961 NCBI chrNW_004955482:9,538,572...9,594,739
Ensembl chrNW_004955482:9,542,079...9,592,972
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:25722412)
(MGI:6716961|PMID:25722412)
UniProt PMID:25722412 MGI:6716961 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) BHF-UCL PMID:12915581 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) UniProt PMID:24310610 MGI:5544501 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) UniProt PMID:32276428 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:33827113) UniProt PMID:33827113 NCBI chrNW_004955500:4,462,314...4,652,634
Ensembl chrNW_004955500:4,462,524...4,652,782
JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:9166430) UniProt PMID:9166430 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) UniProt PMID:18647839 NCBI chrNW_004955439:3,833,525...3,842,393
Ensembl chrNW_004955439:3,833,525...3,842,393
JBrowse link
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
mitigation of host defenses by symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955452:10,493,025...10,542,898
Ensembl chrNW_004955452:10,492,653...10,542,898
JBrowse link
modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (PMID:20010814) UniProt PMID:20010814 NCBI chrNW_004955408:2,575,324...2,621,845
Ensembl chrNW_004955408:2,594,756...2,621,304
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 involved_in ISO (PMID:16254364) UniProt PMID:16254364 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:8995684) UniProt PMID:8995684 NCBI chrNW_004955434:21,509,528...21,510,885
Ensembl chrNW_004955434:21,509,529...21,510,470
JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:11915042) UniProt PMID:11915042 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:1247599 RGD:2317429 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:16227268) UniProt PMID:16227268 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:11175319 RGD:2325644 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188
JBrowse link
negative regulation of cytolysis by symbiont of host cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Krt6a keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chrNW_004955547:2,902,962...2,907,670 JBrowse link
negative regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin subunit alpha V involved_in ISO (PMID:10570297) BHF-UCL PMID:10570297 NCBI chrNW_004955403:11,588,536...11,669,809
Ensembl chrNW_004955403:11,592,339...11,659,297
JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chrNW_004955547:2,902,962...2,907,670 JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:12200142) UniProt PMID:12200142 NCBI chrNW_004955413:29,837,134...29,911,313
Ensembl chrNW_004955413:29,837,134...29,912,222
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Ciita class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chrNW_004955442:7,600,903...7,647,619
Ensembl chrNW_004955442:7,603,893...7,647,624
JBrowse link
G Fcn1 ficolin 1 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chrNW_004955513:3,690,550...3,697,785
Ensembl chrNW_004955513:3,687,232...3,698,673
JBrowse link
G Fcn3 ficolin 3 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chrNW_004955452:6,630,548...6,635,334
Ensembl chrNW_004955452:6,630,505...6,635,235
JBrowse link
G Gsn gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955490:7,977,771...8,168,912
Ensembl chrNW_004955490:7,973,211...8,088,427
JBrowse link
G Nbn nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chrNW_004955408:3,953,801...4,035,494 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chrNW_004955411:33,339,974...33,344,563
Ensembl chrNW_004955411:33,340,274...33,345,500
JBrowse link
G Trim10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955583:268,856...277,079
Ensembl chrNW_004955583:269,266...276,675
JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim26 tripartite motif containing 26 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955583:303,081...325,560
Ensembl chrNW_004955583:303,081...325,560
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955456:16,181,890...16,185,598
Ensembl chrNW_004955456:16,182,453...16,184,669
JBrowse link
G Trim59 tripartite motif containing 59 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955448:10,962,181...10,971,948
Ensembl chrNW_004955448:10,962,549...10,963,736
JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955485:7,784,625...7,798,131
Ensembl chrNW_004955485:7,782,794...7,797,022
JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827
JBrowse link
G Atg7 autophagy related 7 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103), (PMID:28389568)
(MGI:3656111|PMID:16888103)
UniProt PMID:16888103 PMID:28389568 MGI:3656111 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955467:818,975...894,103
Ensembl chrNW_004955467:818,076...894,106
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chrNW_004955495:7,148,806...7,156,296 JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955506:1,307,932...1,322,011
Ensembl chrNW_004955506:1,307,932...1,324,027
JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chrNW_004955407:40,958,562...40,985,415
Ensembl chrNW_004955407:40,957,122...40,976,644
JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) UniProt PMID:32404436 NCBI chrNW_004955412:19,258,955...19,292,766
Ensembl chrNW_004955412:19,258,949...19,292,829
JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
JBrowse link
G Kiaa0319l KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chrNW_004955452:13,538,524...13,649,823
Ensembl chrNW_004955452:13,507,010...13,646,751
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chrNW_004955457:6,749,226...6,841,855
Ensembl chrNW_004955457:6,748,534...6,842,489
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
regulation of entry of bacterium into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO (PMID:24625804) AgBase PMID:24625804 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:26829648) AgBase PMID:26829648 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
JBrowse link
G Exoc2 exocyst complex component 2 involved_in ISO (PMID:20579884) AgBase PMID:20579884 NCBI chrNW_004955465:12,327,423...12,457,171
Ensembl chrNW_004955465:12,330,483...12,461,281
JBrowse link
G Exoc7 exocyst complex component 7 involved_in ISO (PMID:20579884) AgBase PMID:20579884 NCBI chrNW_004955506:6,150,297...6,166,920
Ensembl chrNW_004955506:6,150,260...6,166,920
JBrowse link
G Fuca2 alpha-L-fucosidase 2 involved_in ISO (PMID:19666478) UniProt PMID:19666478 NCBI chrNW_004955436:16,896,629...16,912,406
Ensembl chrNW_004955436:16,896,629...16,915,083
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) UniProt PMID:12138164 NCBI chrNW_004955526:2,418,217...2,652,025
Ensembl chrNW_004955526:2,636,579...2,652,405
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:11602758) CACAO PMID:11602758 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955452:11,348,001...11,377,413
Ensembl chrNW_004955452:11,347,741...11,378,040
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (PMID:15231831) MGI PMID:15231831 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:23290079) CACAO PMID:23290079 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:9630249 RGD:10045968 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Insr insulin receptor involved_in ISO (PMID:17001305) BHF-UCL PMID:17001305 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:20000122 RGD:2325807 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:16256070 RGD:7207780 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
translocation of peptides or proteins into host cell cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcp1 t-complex 1 acts_upstream_of_or_within ISO (MGI:5492256|PMID:23716698) MGI PMID:23716698 MGI:5492256 NCBI chrNW_004955439:21,114,038...21,124,379 JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955584:1,156,828...1,160,056
Ensembl chrNW_004955584:1,156,828...1,160,056
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955417:96,674...135,601
Ensembl chrNW_004955417:96,865...137,739
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959)
(MGI:5619479|PMID:17940959)
UniProt PMID:16193069 PMID:17940959 MGI:5619479 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570), (PMID:16193069), (PMID:17940959)
(MGI:5619479|PMID:17940959)
UniProt PMID:14505570 PMID:16193069 PMID:17940959 MGI:5619479 NCBI chrNW_004955402:47,154,350...47,183,979
Ensembl chrNW_004955402:47,154,007...47,184,021
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620) UniProt PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 NCBI chrNW_004955519:2,591,229...2,643,705
Ensembl chrNW_004955519:2,591,248...2,633,495
JBrowse link
G Agtr1 angiotensin II receptor type 1 involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Clec4g C-type lectin domain family 4 member G involved_in ISO (PMID:16051304), (PMID:24623090) FlyBase PMID:16051304 PMID:24623090 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979
JBrowse link
G Ctsb cathepsin B involved_in ISO (MGI:5640952|PMID:15831716) CACAO PMID:15831716 MGI:5640952 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) UniProt PMID:15650194 NCBI chrNW_004955427:115,513...137,557
Ensembl chrNW_004955427:115,513...119,710
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:23029581) CACAO PMID:23029581 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Hyal2 hyaluronidase 2 ISO facilitates RGD PMID:12584308 RGD:633153 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chrNW_004955403:11,588,536...11,669,809
Ensembl chrNW_004955403:11,592,339...11,659,297
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chrNW_004955478:9,788,192...9,830,254 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
CACAO PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:33000221), (PMID:33082294) UniProt PMID:33000221 PMID:33082294 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632
JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in ISO (PMID:30341327) UniProt PMID:30341327 NCBI chrNW_004955599:376,133...391,434
Ensembl chrNW_004955599:376,245...391,311
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:22573858) UniProt PMID:22573858 NCBI chrNW_004955414:22,117,929...22,121,744
Ensembl chrNW_004955414:22,117,930...22,121,744
JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955414:15,733,116...16,043,555
Ensembl chrNW_004955414:15,731,519...16,043,555
JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955415:13,791,611...13,813,500
Ensembl chrNW_004955415:13,791,611...13,813,500
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955416:7,772,653...7,780,408
Ensembl chrNW_004955416:7,772,653...7,782,542
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP ribosylation factor like GTPase 8B involved_in ISO (PMID:33157038)
(MGI:6508519|PMID:33157038)
UniProt PMID:33157038 MGI:6508519 NCBI chrNW_004955421:8,231,337...8,276,907
Ensembl chrNW_004955421:8,231,582...8,276,907
JBrowse link
viral mRNA export from host cell nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955506:1,278,230...1,282,064
Ensembl chrNW_004955506:1,278,471...1,281,772
JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
JBrowse link
G Thoc1 THO complex 1 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955402:9,675,211...9,708,045
Ensembl chrNW_004955402:9,675,204...9,708,045
JBrowse link
G Thoc2 THO complex 2 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955473:11,029,860...11,143,493
Ensembl chrNW_004955473:11,029,714...11,144,880
JBrowse link
G Thoc3 THO complex 3 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955408:28,467,540...28,480,613
Ensembl chrNW_004955408:28,467,540...28,480,613
JBrowse link
G Thoc5 THO complex 5 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955455:3,761,933...3,795,517
Ensembl chrNW_004955455:3,761,874...3,795,517
JBrowse link
G Thoc6 THO complex 6 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955442:14,314,100...14,317,726
Ensembl chrNW_004955442:14,314,100...14,317,724
JBrowse link
G Thoc7 THO complex 7 involved_in ISO (PMID:18974867) UniProt PMID:18974867 NCBI chrNW_004955517:2,037,406...2,046,694
Ensembl chrNW_004955517:2,027,281...2,046,694
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) UniProt PMID:19129479 NCBI chrNW_004955484:4,589,311...4,630,464
Ensembl chrNW_004955484:4,589,311...4,630,203
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11981
    biological process involved in interspecies interaction between organisms 1179
      biological process involved in symbiotic interaction 192
        biological process involved in interaction with host 113
          acquisition of nutrients from host + 0
          killing by symbiont of host cells + 3
          modulation by symbiont of host process + 25
          movement in host environment + 75
          response to host + 1
          symbiont intracellular protein transport in host + 2
          translocation of molecules into host + 9
paths to the root