Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:spindle localization
go back to main search page
Accession:GO:0051653 term browser browse the term
Definition:Any process in which is the spindle is transported to, and/or maintained in, a specific location.
Synonyms:exact_synonym: establishment and maintenance of spindle localization;   spindle localisation


show annotations for term's descendants           Sort by:
spindle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 acts_upstream_of_or_within IGI (PMID:21494665) MGI PMID:21494665 NCBI chr11:20,012,304...20,062,951
Ensembl chr11:20,012,304...20,062,913 		JBrowse link
G Actr3 ARP3 actin-related protein 3 acts_upstream_of_or_within IGI (PMID:21494665) MGI PMID:21494665 NCBI chr 1:125,320,642...125,363,464
Ensembl chr 1:125,320,642...125,363,464 		JBrowse link
G Aspm abnormal spindle microtubule assembly involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 1:139,381,450...139,421,826
Ensembl chr 1:139,382,510...139,421,829 		JBrowse link
G Kash5 KASH domain containing 5 involved_in IBA
IDA		 (PMID:26842404) GO_Central
UniProt		 PMID:26842404 GO_REF:0000033 NCBI chr 7:44,833,043...44,854,344
Ensembl chr 7:44,833,048...44,854,316 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:25485583) AgBase PMID:25485583 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
G Wasl WASP like actin nucleation promoting factor acts_upstream_of_or_within IMP (PMID:21874009) MGI PMID:21874009 NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008 		JBrowse link
establishment of meiotic spindle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn2 formin 2 involved_in IMP (PMID:12447394), (PMID:21620703) UniProt PMID:12447394 PMID:21620703 NCBI chr 1:174,324,079...174,650,295
Ensembl chr 1:174,329,391...174,650,295 		JBrowse link
G Myh9 myosin, heavy polypeptide 9, non-muscle acts_upstream_of_or_within IDA (PMID:9725909) MGI PMID:9725909 NCBI chr15:77,644,788...77,726,315
Ensembl chr15:77,644,787...77,726,375 		JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in IMP
IBA
ISO		 (PMID:21620703) UniProt
GO_Central		 PMID:21620703 GO_REF:0000033 GO_REF:0000119 NCBI chr18:67,621,279...67,745,880
Ensembl chr18:67,621,279...67,743,860 		JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in IMP
IBA
ISO		 (PMID:21620703) UniProt
GO_Central		 PMID:21620703 GO_REF:0000033 GO_REF:0000119 NCBI chr 8:124,059,452...124,096,257
Ensembl chr 8:124,059,452...124,096,254 		JBrowse link
establishment of meiotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mos Moloney sarcoma oncogene involved_in IMP (PMID:8692939) UniProt PMID:8692939 NCBI chr 4:3,870,658...3,872,105
Ensembl chr 4:3,870,657...3,872,105 		JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 involved_in IMP (PMID:22336914) UniProt PMID:22336914 NCBI chr18:74,328,370...74,340,889
Ensembl chr18:74,328,370...74,340,889 		JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 involved_in IMP (PMID:22336914) UniProt PMID:22336914 NCBI chr11:87,000,087...87,013,800
Ensembl chr11:87,000,060...87,015,461 		JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 involved_in IMP (PMID:22336914) UniProt PMID:22336914 NCBI chr14:58,044,016...58,063,748
Ensembl chr14:58,044,018...58,063,642 		JBrowse link
establishment of mitotic spindle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 CLIP associating protein 1 involved_in ISO
IBA		 GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 1:118,314,976...118,537,192
Ensembl chr 1:118,316,788...118,540,408 		JBrowse link
G Clasp2 CLIP associating protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:113,567,776...113,748,765
Ensembl chr 9:113,570,541...113,748,750 		JBrowse link
G Kpnb1 karyopherin subunit beta 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:97,050,536...97,078,718
Ensembl chr11:97,050,540...97,078,707 		JBrowse link
G Nusap1 nucleolar and spindle associated protein 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:12963707) MGI
GO_Central		 PMID:12963707 GO_REF:0000033 NCBI chr 2:119,449,205...119,480,646
Ensembl chr 2:119,448,779...119,481,725 		JBrowse link
establishment of mitotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin-repeat and fibronectin type III domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:89,280,918...89,668,727
Ensembl chr11:89,281,049...89,732,092 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in IMP (PMID:19448628) UniProt PMID:19448628 NCBI chr 3:88,500,427...88,556,839
Ensembl chr 3:88,513,273...88,555,359 		JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:133,311,045...133,322,874
Ensembl chr 7:133,311,062...133,322,874 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IBA
IMP		 (PMID:20460369) GO_Central
UniProt		 PMID:20460369 GO_REF:0000033 NCBI chr 4:70,135,092...70,328,672
Ensembl chr 4:70,135,093...70,328,680 		JBrowse link
G Cenpa centromere protein A involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:30,824,214...30,832,181
Ensembl chr 5:30,824,121...30,832,174 		JBrowse link
G Dctn1 dynactin 1 involved_in ISO
IBA
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 6:83,142,702...83,177,103
Ensembl chr 6:83,142,902...83,177,099 		JBrowse link
G Dynlt1b dynein light chain Tctex-type 1B involved_in IMP (PMID:9448628) UniProt PMID:9448628 NCBI chr17:6,697,511...6,703,695
Ensembl chr17:6,697,511...6,703,695 		JBrowse link
G Enkd1 enkurin domain containing 1 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 8:106,430,281...106,435,358
Ensembl chr 8:106,430,283...106,434,842 		JBrowse link
G Fbxw11 F-box and WD-40 domain protein 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:32,592,595...32,696,816
Ensembl chr11:32,592,724...32,696,816 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Gpsm1 G-protein signalling modulator 1 (AGS3-like, C. elegans) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:26,204,623...26,238,249
Ensembl chr 2:26,205,527...26,238,249 		JBrowse link
G Gpsm2 G-protein signalling modulator 2 (AGS3-like, C. elegans) involved_in ISO
IBA
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 3:108,585,954...108,629,637
Ensembl chr 3:108,585,954...108,629,625 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr18:38,070,024...38,088,073
Ensembl chr18:38,068,897...38,088,069 		JBrowse link
G Htt huntingtin involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:101,471,839...101,487,419
Ensembl chr 7:101,471,839...101,487,436 		JBrowse link
G Insc INSC spindle orientation adaptor protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:114,342,931...114,449,615
Ensembl chr 7:114,342,929...114,449,618 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Mad2l1 MAD2 mitotic arrest deficient-like 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:66,512,205...66,518,091
Ensembl chr 6:66,512,374...66,524,204 		JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 2:153,583,131...153,615,237
Ensembl chr 2:153,583,194...153,615,230 		JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 acts_upstream_of_or_within IMP (PMID:21947081) MGI PMID:21947081 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205 		JBrowse link
G Misp mitotic spindle positioning involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr10:79,656,853...79,666,286
Ensembl chr10:79,656,823...79,666,324 		JBrowse link
G Ndc80 NDC80 kinetochore complex component involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:71,803,095...71,833,852
Ensembl chr17:71,803,095...71,833,852 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in IBA
IEA
ISO		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr16:13,981,139...14,010,792
Ensembl chr16:13,981,139...14,010,792 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:68,712,260...68,743,961
Ensembl chr11:68,712,260...68,762,684 		JBrowse link
G Nsfl1c NSFL1 (p97) cofactor (p47) involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:151,336,102...151,353,230
Ensembl chr 2:151,336,102...151,353,334 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in IBA
ISS
IMP
ISO		 (PMID:26765568) GO_Central
UniProt		 PMID:26765568 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 7:101,583,169...101,664,166
Ensembl chr 7:101,583,318...101,664,171 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in IBA
ISO
IEA		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000119 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:22031545) MGI PMID:22031545 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 involved_in IMP (PMID:19959710) UniProt PMID:19959710 NCBI chr 1:20,128,003...20,688,306
Ensembl chr 1:20,128,003...20,688,288 		JBrowse link
G Plk1 polo like kinase 1 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in IMP (PMID:26766442) UniProt PMID:26766442 NCBI chr 2:25,261,974...25,268,225
Ensembl chr 2:25,262,333...25,268,225 		JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 involved_in IBA
ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr11:34,700,012...34,724,492
Ensembl chr11:34,700,017...34,724,468 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr 3:37,694,096...37,698,748
Ensembl chr 3:37,694,096...37,698,747 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253 		JBrowse link
G Ubxn2b UBX domain protein 2B involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:6,191,105...6,219,788
Ensembl chr 4:6,191,098...6,221,688 		JBrowse link
G Zw10 zw10 kinetochore protein involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 9:48,966,880...48,990,075
Ensembl chr 9:48,966,913...48,990,075 		JBrowse link
establishment of spindle localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1, non-muscle involved_in IMP (PMID:25208553) UniProt PMID:25208553 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229 		JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr12:110,567,829...110,633,378
Ensembl chr12:110,567,886...110,633,379 		JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 involved_in IMP (PMID:25208553) UniProt PMID:25208553 NCBI chr 7:23,085,314...23,141,348
Ensembl chr 7:23,085,314...23,141,347 		JBrowse link
G Ooep oocyte expressed protein involved_in IMP (PMID:25208553) UniProt PMID:25208553 NCBI chr 9:78,284,185...78,285,870
Ensembl chr 9:78,283,391...78,286,007 		JBrowse link
G Tle6 transducin-like enhancer of split 6 involved_in IMP (PMID:25208553) UniProt PMID:25208553 NCBI chr10:81,426,738...81,437,021
Ensembl chr10:81,426,738...81,436,907 		JBrowse link
G Zbed3 zinc finger, BED type containing 3 involved_in IMP (PMID:28992324) UniProt PMID:28992324 NCBI chr13:95,460,113...95,474,350
Ensembl chr13:95,460,120...95,474,349 		JBrowse link
establishment of spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 CLIP associating protein 1 acts_upstream_of_or_within ISO (PMID:21822276) MGI PMID:21822276 NCBI chr 1:118,314,976...118,537,192
Ensembl chr 1:118,316,788...118,540,408 		JBrowse link
G Llgl1 LLGL1 scribble cell polarity complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:60,590,501...60,605,012
Ensembl chr11:60,590,549...60,605,012 		JBrowse link
G Llgl2 LLGL2 scribble cell polarity complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:115,714,855...115,746,606
Ensembl chr11:115,714,875...115,746,606 		JBrowse link
G Map4 microtubule-associated protein 4 acts_upstream_of_or_within ISO
IDA		 (PMID:21822276) MGI PMID:21822276 NCBI chr 9:109,758,909...109,913,018
Ensembl chr 9:109,760,528...109,913,023 		JBrowse link
G Spag5 sperm associated antigen 5 acts_upstream_of_or_within IMP (PMID:22031545) MGI PMID:22031545 NCBI chr11:78,192,412...78,213,283
Ensembl chr11:78,192,355...78,213,283 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    cellular process 18389
      cell cycle process 1379
        spindle localization 66
          establishment of spindle localization + 60
          maintenance of spindle location 0
Path 2
Term Annotations click to browse term
  biological_process 28635
    cellular process 18389
      cell cycle 1773
        cell cycle process 1379
          spindle localization 66
            establishment of spindle localization + 60
            maintenance of spindle location 0
paths to the root