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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of stimulus
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Accession:GO:0051606 term browser browse the term
Definition:The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.
Synonyms:exact_synonym: stimulus detection
 related_synonym: perception of stimulus;   stimulus sensing


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detection of stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
UniProtKB
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004936542:569,739...883,738 JBrowse link
G Crtam cytotoxic and regulatory T cell molecule ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
HGNC
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004936542:7,402,879...7,411,510 JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chrNW_004936495:11,065,946...11,082,104 JBrowse link
G Rs1 retinoschisin 1 ISO (MGI:3055638|PMID:15326152) MGI PMID:15326152 MGI:3055638 NCBI chrNW_004936844:284,938...314,524 JBrowse link
contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor ISO (PMID:9422511) BHF-UCL PMID:9422511 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Tspo translocator protein ISO RGD PMID:18190798 RGD:2317142 NCBI chrNW_004936718:992,301...995,172 JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (PMID:17974916) UniProtKB PMID:17974916 NCBI chrNW_004936551:5,638,383...5,740,523 JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004936886:715,159...734,428 JBrowse link
detection of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naip NLR family apoptosis inhibitory protein ISO (MGI:5289703|PMID:21874021) UniProt PMID:21874021 MGI:5289703 NCBI chrNW_004936549:5,000,526...5,069,110 JBrowse link
G Nlrc4 NLR family CARD domain containing 4 ISO (PMID:15107016)
(MGI:5444805|PMID:22885697)
HGNC
UniProt
PMID:15107016, PMID:22885697 MGI:5444805 NCBI chrNW_004936493:1,189,940...1,233,408 JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936478:6,717,354...6,768,293 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO (MGI:3052258|PMID:15282315) MGI PMID:15282315 MGI:3052258 NCBI chrNW_004936728:428,028...538,413 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004936706:2,317,137...2,320,993 JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004936596:5,038,452...5,043,172 JBrowse link
detection of calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm2 calmodulin 2 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Casr calcium sensing receptor ISO (PMID:27434672) RGD
UniProtKB
PMID:7816802, PMID:27434672 RGD:1298562 NCBI chrNW_004936536:8,574,064...8,599,446 JBrowse link
G Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936566:4,219,377...4,462,459 JBrowse link
G Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936566:3,903,272...3,918,741 JBrowse link
G Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004936545:8,052,407...8,115,310 JBrowse link
G LOC101967074 calmodulin ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G Ryr2 ryanodine receptor 2 ISO (PMID:10830164) BHF-UCL PMID:10830164 NCBI chrNW_004936484:15,402,488...15,825,410 JBrowse link
G Stim1 stromal interaction molecule 1 ISO (PMID:16005298) UniProtKB PMID:16005298 NCBI chrNW_004936498:849,775...1,063,552 JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:22229667 RGD:7205654 NCBI chrNW_004936698:65,210...575,538 JBrowse link
detection of chemical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drgx dorsal root ganglia homeobox ISO (MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:2137781 NCBI chrNW_004936728:892,814...923,089 JBrowse link
detection of chemical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
G LOC101976184 olfactory receptor 1019 ISO (MGI:6187791|PMID:29659735) UniProt PMID:29659735 MGI:6187791 NCBI chrNW_004936581:5,883,308...5,884,334 JBrowse link
G LOC101977328 olfactory receptor 15 ISO (MGI:6162342|PMID:25901328) UniProt PMID:25901328 MGI:6162342 NCBI chrNW_004936694:901,542...905,354 JBrowse link
detection of chemical stimulus involved in sensory perception of bitter taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004936543:105,983...113,475 JBrowse link
G Ca6 carbonic anhydrase 6 ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004936623:3,169,095...3,188,947 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:7596440 RGD:1599025 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO RGD PMID:12917372 RGD:1599039 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Lpo lactoperoxidase ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004936490:4,821,421...4,838,377 JBrowse link
G Pigr polymeric immunoglobulin receptor ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004936557:5,690,895...5,701,822 JBrowse link
G Pip prolactin induced protein ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004936527:540,051...544,586 JBrowse link
G Plcb2 phospholipase C beta 2 ISO RGD PMID:9860142 RGD:729588 NCBI chrNW_004936471:3,756,978...3,776,452 JBrowse link
G Rtp3 receptor transporter protein 3 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004936596:392,885...408,892 JBrowse link
G Rtp4 receptor transporter protein 4 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004936578:2,707,432...2,710,230 JBrowse link
G Tas2r1 taste 2 receptor member 1 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936643:1,877,112...1,878,002 JBrowse link
G Tas2r16 taste 2 receptor member 16 ISO (PMID:16720576), (PMID:20022913) HGNC PMID:16720576, PMID:20022913 NCBI chrNW_004936605:2,398,240...2,399,145 JBrowse link
G Tas2r3 taste 2 receptor member 3 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936592:5,628,584...5,632,367 JBrowse link
G Tas2r38 taste 2 receptor member 38 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936592:5,757,282...5,758,182 JBrowse link
G Tas2r39 taste 2 receptor member 39 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936527:675,413...676,462 JBrowse link
G Tas2r4 taste 2 receptor member 4 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936592:5,639,761...5,642,187 JBrowse link
G Tas2r40 taste 2 receptor member 40 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936527:705,947...706,909 JBrowse link
G Tas2r42 taste 2 receptor member 42 NOT ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936587:5,742,323...5,743,300 JBrowse link
G Tas2r60 taste 2 receptor member 60 NOT ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004936527:875,240...876,707 JBrowse link
detection of chemical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2450005|PMID:12060708)
(MGI:2155574|PMID:11754838)
MGI PMID:11754838, PMID:12060708 MGI:2155574, MGI:2450005 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO (MGI:3692354|PMID:16564016), (MGI:3790589|PMID:18398506)
(MGI:3623714|PMID:16630838), (MGI:3794274|PMID:18297068)
(MGI:3790902|PMID:18272293)
MGI PMID:16564016, PMID:16630838, PMID:18272293, PMID:18297068, PMID:18398506 MGI:3623714, MGI:3692354, MGI:3790589, MGI:3790902, MGI:3794274 NCBI chrNW_004936648:1,094,460...1,141,394 JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:3790902|PMID:18272293)
(MGI:3794274|PMID:18297068)
MGI PMID:18272293, PMID:18297068 MGI:3790902, MGI:3794274 NCBI chrNW_004936677:277,304...326,907 JBrowse link
detection of chemical stimulus involved in sensory perception of smell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101977328 olfactory receptor 15 ISO (MGI:6187791|PMID:29659735) UniProt PMID:29659735 MGI:6187791 NCBI chrNW_004936694:901,542...905,354 JBrowse link
detection of chemical stimulus involved in sensory perception of sweet taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tas1r2 taste 1 receptor member 2 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004936474:5,196,353...5,211,676 JBrowse link
G Tas1r3 taste 1 receptor member 3 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004936737:1,811,123...1,814,982 JBrowse link
detection of cold stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grik2 glutamate ionotropic receptor kainate type subunit 2 ISO (MGI:6414684|PMID:31474366) UniProt PMID:31474366 MGI:6414684 NCBI chrNW_004936651:2,756,559...3,401,806 JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
G Tlr6 toll like receptor 6 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936482:6,607,723...6,610,161 JBrowse link
detection of DNA damage stimulus involved in DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 ISO (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chrNW_004936529:264,535...266,451 JBrowse link
detection of fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A ISO (PMID:19358895) ARUK-UCL PMID:19358895 NCBI chrNW_004936902:436,224...446,435 JBrowse link
detection of glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gck glucokinase ISO in ventromedial hypothalamic neurons
(PMID:12941786)
PMID:17470517
RGD
UniProtKB
BHF-UCL
PMID:12941786, PMID:16443775, PMID:17470517 RGD:1601297, RGD:8554539 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO PMID:21108535 BHF-UCL PMID:21108535 RGD:8553608 NCBI chrNW_004936472:23,102,534...23,107,127 JBrowse link
detection of gravity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nox3 NADPH oxidase 3 ISO (MGI:1351720|PMID:10491954) MGI PMID:10491954 MGI:1351720 NCBI chrNW_004936489:7,568,162...7,623,370 JBrowse link
G Otop1 otopetrin 1 ISO (MGI:2654297|PMID:12651873) MGI PMID:12651873 MGI:2654297 NCBI chrNW_004936477:16,876,725...16,899,007 JBrowse link
detection of hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004936487:15,467,165...15,499,180 JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004936488:4,986,712...5,008,728 JBrowse link
detection of hypoxic conditions in blood by carotid body chemoreceptor signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx2 purinergic receptor P2X 2 ISO (MGI:2682434|PMID:14672995) MGI PMID:14672995 MGI:2682434 NCBI chrNW_004936660:2,570,627...2,574,081 JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004936477:22,418,037...22,472,251 JBrowse link
G Rho rhodopsin ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004936602:896,730...901,480 JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Best1 bestrophin 1 ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004936581:1,120,681...1,132,226 JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (PMID:7571473) UniProtKB PMID:7571473 NCBI chrNW_004936721:1,078,570...1,106,153 JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ISO (PMID:17033974) UniProtKB PMID:17033974 NCBI chrNW_004936606:2,011,454...2,118,255 JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) CACAO PMID:21680557 MGI:5141557 NCBI chrNW_004936473:7,027,543...7,054,079 JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chrNW_004936561:5,283,258...5,331,688 JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858) MGI PMID:22447858 MGI:5315300 NCBI chrNW_004936567:6,347,661...6,559,731 JBrowse link
G Eys eyes shut homolog ISO (PMID:18836446), (PMID:18976725), (PMID:20696082), (PMID:22363543) CACAO PMID:18836446, PMID:18976725, PMID:20696082, PMID:22363543 NCBI chrNW_004936476:158,391...1,289,639 JBrowse link
G Gja10 gap junction protein alpha 10 ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chrNW_004936510:2,380,114...2,395,781 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859)
(MGI:3772743|PMID:18171936)
UniProtKB
MGI
PMID:17584859, PMID:18171936 MGI:3772743 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (PMID:12077706)
(MGI:3714271|PMID:17065522)
UniProtKB
MGI
PMID:12077706, PMID:17065522 MGI:3714271 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO (PMID:17405131) UniProtKB PMID:17405131 NCBI chrNW_004936739:1,726,382...1,742,937 JBrowse link
G Gucy2f guanylate cyclase 2F, retinal ISO (MGI:3708225|PMID:17255100) CACAO PMID:17255100 MGI:3708225 NCBI chrNW_004936499:5,653,384...5,752,732 JBrowse link
G Prph2 peripherin 2 ISO (MGI:5905515|PMID:28053051)
(MGI:6305433|PMID:26420485)
(MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485)
MGI PMID:26420485, PMID:28053051 MGI:5905515, MGI:6305433 NCBI chrNW_004936476:17,159,756...17,174,226 JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chrNW_004936601:1,401,215...1,410,195 JBrowse link
G Reep6 receptor accessory protein 6 ISO (PMID:27889058) UniProtKB PMID:27889058 NCBI chrNW_004936588:800,492...804,769 JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO (MGI:3027216|PMID:14625292) MGI PMID:14625292 MGI:3027216 NCBI chrNW_004936570:3,042,233...3,043,884 JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:5905515|PMID:28053051) MGI PMID:28053051 MGI:5905515 NCBI chrNW_004936581:642,322...644,286 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (PMID:21521437) CACAO PMID:21521437 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema5b semaphorin 5B ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936725:2,229,772...2,270,458 JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004936476:23,744,707...23,757,002 JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 ISO (PMID:19252480) UniProtKB PMID:19252480 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004936558:530,828...555,098 JBrowse link
G Tlr4 toll like receptor 4 ISO (PMID:19252480)
(MGI:5913054|PMID:28098138)
UniProtKB
UniProt
PMID:19252480, PMID:28098138 MGI:5913054 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chrNW_004936540:6,437,362...6,712,433 JBrowse link
G Jup junction plakoglobin ISO (PMID:18937352) BHF-UCL PMID:18937352 NCBI chrNW_004936490:16,671,176...16,694,552 JBrowse link
G Piezo1 piezo type mechanosensitive ion channel component 1 ISO (MGI:4833892|PMID:20813920) MGI PMID:20813920 MGI:4833892 NCBI chrNW_004936641:932,291...980,440 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (MGI:2449360|PMID:12514735)
(MGI:3512725|PMID:15545994)
MGI PMID:12514735, PMID:15545994 MGI:2449360, MGI:3512725 NCBI chrNW_004936694:1,923,383...1,958,160 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:2449360|PMID:12514735) MGI PMID:12514735 MGI:2449360 NCBI chrNW_004936905:76,781...128,995 JBrowse link
detection of mechanical stimulus involved in equilibrioception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965031 protocadherin-15 ISO (MGI:3616414|PMID:16481439) MGI PMID:16481439 MGI:3616414 NCBI chrNW_004936910:233,800...602,145 JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chrNW_004936566:1,630,698...1,632,607 JBrowse link
detection of mechanical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 ISO (MGI:2180082|PMID:11069180) MGI PMID:11069180 MGI:2180082 NCBI chrNW_004936538:938,266...2,011,154 JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO RGD PMID:12591163 RGD:11570504 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:21037532 RGD:8549460 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Piezo2 piezo type mechanosensitive ion channel component 2 ISO (MGI:5574426|PMID:24717433) UniProt PMID:24717433 MGI:5574426 NCBI chrNW_004936626:802,415...1,141,260 JBrowse link
G Serpine2 serpin family E member 2 ISO (MGI:3521551|PMID:15509762) MGI PMID:15509762 MGI:3521551 NCBI chrNW_004936569:5,642,328...5,668,278 JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 NOT ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004936599:647,230...726,371 JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2450005|PMID:12060708)
(MGI:2155574|PMID:11754838)
MGI PMID:11754838, PMID:12060708 MGI:2155574, MGI:2450005 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:28012171 RGD:13782150 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chrNW_004936512:6,652,836...6,666,171 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212, PMID:28108674 RGD:12910551, RGD:13463594 NCBI chrNW_004936469:39,794,613...39,798,448 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004936679:388,500...588,518 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A NOT ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D NOT ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004936664:2,512,777...2,546,865 JBrowse link
G Grm8 glutamate metabotropic receptor 8 ISO RGD PMID:18533199 RGD:6771181 NCBI chrNW_004936479:13,768,014...14,504,387 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO RGD PMID:21843960 RGD:6482179 NCBI chrNW_004936601:3,569,626...3,626,782 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:19853379 RGD:2315887 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:18234883 RGD:2303705 NCBI chrNW_004936480:14,320,292...14,417,828 JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:5494919|PMID:23473320) UniProt PMID:23473320 MGI:5494919 NCBI chrNW_004937109:142,711...144,257 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:21238854 RGD:9835398 NCBI chrNW_004936698:650,225...746,593 JBrowse link
G Phf24 PHD finger protein 24 ISO (MGI:5616490|PMID:25242222) MGI PMID:25242222 MGI:5616490 NCBI chrNW_004936524:3,020,421...3,031,720 JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 ISO (MGI:5796061|PMID:27281198) UniProt PMID:27281198 MGI:5796061 NCBI chrNW_004936469:13,194,769...13,345,979 JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Tmem120a transmembrane protein 120A ISO (MGI:6414708|PMID:32084332) UniProt PMID:32084332 MGI:6414708 NCBI chrNW_004936543:2,270,444...2,275,999 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:16675114 RGD:7387300 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO (MGI:3623714|PMID:16630838) MGI PMID:16630838 MGI:3623714 NCBI chrNW_004936648:1,094,460...1,141,394 JBrowse link
detection of mechanical stimulus involved in sensory perception of sound term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:3629345|PMID:16775142) MGI PMID:16775142 MGI:3629345 NCBI chrNW_004936469:8,653,031...9,209,840 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO (MGI:3771935|PMID:18077337) MGI PMID:18077337 MGI:3771935 NCBI chrNW_004936498:1,224,123...1,230,640 JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO (MGI:3771935|PMID:18077337) MGI PMID:18077337 MGI:3771935 NCBI chrNW_004936482:7,792,292...7,801,152 JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO (PMID:10889003) UniProtKB PMID:10889003 NCBI chrNW_004936730:466,912...680,823 JBrowse link
G Hpn hepsin ISO (MGI:3719967|PMID:17620368), (MGI:5306554|PMID:20683358), (MGI:5308539|PMID:17918732) UniProt PMID:17620368, PMID:17918732, PMID:20683358 MGI:3719967, MGI:5306554, MGI:5308539 NCBI chrNW_004936570:1,170,951...1,186,501 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:3530388|PMID:15731517) UniProt PMID:15731517 MGI:3530388 NCBI chrNW_004936482:17,162,854...17,238,319 JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:5468200|PMID:23217710) MGI PMID:23217710 MGI:5468200 NCBI chrNW_004936476:23,479,939...23,491,611 JBrowse link
G LOC101965031 protocadherin-15 ISO (MGI:3616414|PMID:16481439)
(MGI:4950645|PMID:21427143)
MGI PMID:16481439, PMID:21427143 MGI:3616414, MGI:4950645 NCBI chrNW_004936910:233,800...602,145 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:3607949|PMID:16170314) MGI PMID:16170314 MGI:3607949 NCBI chrNW_004936485:9,089,118...9,114,396 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3712581|PMID:17523175) MGI PMID:17523175 MGI:3712581 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004936600:4,660,211...4,678,911 JBrowse link
G Pjvk pejvakin ISO (MGI:5907777|PMID:28089576) MGI PMID:28089576 MGI:5907777 NCBI chrNW_004936509:7,670,557...7,677,480 JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q ISO (MGI:5315778|PMID:22357859) MGI PMID:22357859 MGI:5315778 NCBI chrNW_004936698:1,372,604...1,569,905 JBrowse link
G Rest RE1 silencing transcription factor ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chrNW_004936566:1,630,698...1,632,607 JBrowse link
G Strc stereocilin ISO (MGI:3818235|PMID:18849963) MGI PMID:18849963 MGI:3818235 NCBI chrNW_004936471:6,760,289...6,777,425 JBrowse link
G Tmc1 transmembrane channel like 1 ISO (MGI:5320864|PMID:22105175)
(MGI:5515249|PMID:23871232)
MGI PMID:22105175, PMID:23871232 MGI:5320864, MGI:5515249 NCBI chrNW_004936503:8,669,465...8,826,340 JBrowse link
G Tmc2 transmembrane channel like 2 ISO (PMID:11850618)
(MGI:5320864|PMID:22105175)
UniProtKB
MGI
PMID:11850618, PMID:22105175 MGI:5320864 NCBI chrNW_004936485:16,051,974...16,122,899 JBrowse link
G Whrn whirlin ISO (MGI:4454934|PMID:20502675) UniProt PMID:20502675 MGI:4454934 NCBI chrNW_004936487:3,668,465...3,748,234 JBrowse link
detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:5494919|PMID:23473320) UniProt PMID:23473320 MGI:5494919 NCBI chrNW_004937109:142,711...144,257 JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 ISO (MGI:3846268|PMID:19279663) UniProt PMID:19279663 MGI:3846268 NCBI chrNW_004936599:4,910,783...4,917,355 JBrowse link
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein ISO (PMID:11528597) BHF-UCL PMID:11528597 NCBI chrNW_004936561:3,017,471...3,035,481 JBrowse link
detection of molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A ISO (PMID:19358895) ARUK-UCL PMID:19358895 NCBI chrNW_004936902:436,224...446,435 JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:12527755), (PMID:15998797) MGI PMID:12527755, PMID:15998797 NCBI chrNW_004936475:3,708,069...3,742,845 JBrowse link
detection of muscle stretch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (MGI:5613732|PMID:25257915) BHF-UCL PMID:25257915 MGI:5613732 NCBI chrNW_004936602:4,264,896...4,278,160 JBrowse link
G Csrp3 cysteine and glycine rich protein 3 ISO (PMID:12507422)
(MGI:2447926|PMID:12507422)
BHF-UCL PMID:12507422 MGI:2447926 NCBI chrNW_004936654:271,067...313,251 JBrowse link
G Tcap titin-cap ISO (PMID:12507422) BHF-UCL PMID:12507422 NCBI chrNW_004936490:14,856,433...14,857,692 JBrowse link
G Ttn titin ISO (PMID:18765796) MGI PMID:18765796 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chrNW_004936478:22,255,887...22,389,477 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Tmem107 transmembrane protein 107 ISO (MGI:6405644|PMID:31887266) MGI PMID:31887266 MGI:6405644 NCBI chrNW_004936595:1,404,017...1,406,756 JBrowse link
detection of oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc11a2 solute carrier family 11 member 2 NOT ISO (PMID:18419598) UniProtKB PMID:18419598 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Sod2 superoxide dismutase 2 ISO (MGI:1930860|PMID:11156968) MGI PMID:11156968 MGI:1930860 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
detection of stimulus involved in cell cycle checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 ISO (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chrNW_004936529:264,535...266,451 JBrowse link
detection of temperature stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chrNW_004936540:6,437,362...6,712,433 JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:2137781 NCBI chrNW_004936728:892,814...923,089 JBrowse link
G Ngfr nerve growth factor receptor ISO (MGI:1098517|PMID:1317267) MGI PMID:1317267 MGI:1098517 NCBI chrNW_004936490:12,038,500...12,057,257 JBrowse link
detection of temperature stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:20065990 RGD:5129094 NCBI chrNW_004936567:1,430,128...1,508,626 JBrowse link
G Ano1 anoctamin 1 ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004936599:647,230...726,371 JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:21926413 RGD:5509871 NCBI chrNW_004936677:3,173,054...3,181,475 JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2450005|PMID:12060708) MGI PMID:12060708 MGI:2450005 NCBI chrNW_004936527:6,473,305...6,478,756 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004936469:39,794,613...39,798,448 JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:5294537|PMID:19025592) UniProt PMID:19025592 MGI:5294537 NCBI chrNW_004936529:8,006,780...8,261,923 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Lxn latexin ISO (MGI:3619806|PMID:16469302) MGI PMID:16469302 MGI:3619806 NCBI chrNW_004936519:5,266,988...5,273,227 JBrowse link
G Mmp24 matrix metallopeptidase 24 ISO (MGI:4361769|PMID:19805319) UniProt PMID:19805319 MGI:4361769 NCBI chrNW_004936561:5,479,107...5,501,559 JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chrNW_004936596:3,596,720...3,606,283 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15733655 RGD:9743979 NCBI chrNW_004936514:10,240,990...10,272,859 JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:17179954 RGD:9835416 NCBI chrNW_004936698:650,225...746,593 JBrowse link
G Prdm12 PR/SET domain 12 ISO (PMID:26005867) MGI PMID:26005867 NCBI chrNW_004936487:17,656,311...17,670,074 JBrowse link
G Tac1 tachykinin precursor 1 ISO (PMID:17655832) UniProt PMID:17655832 NCBI chrNW_004936585:2,932,783...2,941,141 JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004936487:6,519,140...6,532,018 JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004936677:277,304...326,907 JBrowse link
detection of temperature stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn4 opsin 4 ISO (MGI:6407235|PMID:31924821) MGI PMID:31924821 MGI:6407235 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Rho rhodopsin ISO (MGI:6407235|PMID:31924821) MGI PMID:31924821 MGI:6407235 NCBI chrNW_004936602:896,730...901,480 JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:3834285|PMID:18455988) MGI PMID:18455988 MGI:3834285 NCBI chrNW_004936677:277,304...326,907 JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll like receptor 1 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936482:6,582,430...6,591,128 JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004936576:522,234...531,660 JBrowse link
detection of tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crtam cytotoxic and regulatory T cell molecule ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
HGNC
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004936542:7,402,879...7,411,510 JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase ISO (MGI:2384247|PMID:12149233) MGI PMID:12149233 MGI:2384247 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx6 iroquois homeobox 6 ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004936475:7,665,100...7,672,132 JBrowse link
detection of wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO (MGI:3522465|PMID:12500195) MGI PMID:12500195 MGI:3522465 NCBI chrNW_004943883:4...1,756 JBrowse link
DNA damage response, detection of DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap410 cilia and flagella associated protein 410 ISO (PMID:26290490) UniProtKB PMID:26290490 NCBI chrNW_004936500:82,702...90,525 JBrowse link
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ISO RGD PMID:9605323 RGD:633115 NCBI chrNW_004936524:1,599,883...1,611,302 JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (PMID:19465398) UniProtKB PMID:19465398 NCBI chrNW_004936545:3,944,419...3,958,289 JBrowse link
G Nek1 NIMA related kinase 1 ISO (PMID:15604234) UniProtKB PMID:15604234 NCBI chrNW_004936516:1,508,800...1,666,841 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:15857403 RGD:1601082 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:10446192) UniProtKB PMID:10446192 NCBI chrNW_004936664:3,649,020...3,656,545 JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:22510408)
(PMID:23911537)
UniProtKB PMID:22510408, PMID:23911537 NCBI chrNW_004936498:4,198,189...4,204,531 JBrowse link
negative regulation of cell growth involved in contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr2 cadherin related family member 2 ISO (PMID:12117771) UniProtKB PMID:12117771 NCBI chrNW_004936597:831,895...855,925 JBrowse link
negative regulation of cell proliferation involved in contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dach1 dachshund family transcription factor 1 ISO (MGI:3719935|PMID:17182846) MGI PMID:17182846 MGI:3719935 NCBI chrNW_004936511:8,899,245...9,253,024 JBrowse link
G Fap fibroblast activation protein alpha ISO (MGI:3047166|PMID:15133496) UniProt PMID:15133496 MGI:3047166 NCBI chrNW_004936469:16,817,000...16,889,066 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO (PMID:12912914) UniProtKB PMID:12912914 NCBI chrNW_004936498:6,001,126...6,135,663 JBrowse link
G Srpx sushi repeat containing protein X-linked ISO (MGI:3691893|PMID:12049817) MGI PMID:12049817 MGI:3691893 NCBI chrNW_004936502:5,010,692...5,107,221 JBrowse link
negative regulation of detection of glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004936620:2,966,341...2,969,349 JBrowse link
negative regulation of detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chrNW_004936512:6,652,836...6,666,171 JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO (MGI:3772638|PMID:11853756) MGI PMID:11853756 MGI:3772638 NCBI chrNW_004936498:4,089,621...4,172,749 JBrowse link
G Asic2 acid sensing ion channel subunit 2 ISO (MGI:3042539|PMID:14762118) MGI PMID:14762118 MGI:3042539 NCBI chrNW_004936538:938,266...2,011,154 JBrowse link
G Cabp4 calcium binding protein 4 ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004936599:2,295,124...2,299,558 JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (MGI:3527312|PMID:15634774) MGI PMID:15634774 MGI:3527312 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:1928441, MGI:3609280, MGI:3615719, MGI:3757777, MGI:3772638, MGI:3778702 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) MGI PMID:17408617, PMID:18171936 MGI:3761397, MGI:3772743 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chrNW_004936803:67,933...71,508 JBrowse link
G Guca1b guanylate cyclase activator 1B ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chrNW_004936476:17,679,505...17,688,970 JBrowse link
G Opn4 opsin 4 ISO (PMID:15674244)
(MGI:2667269|PMID:12808468)
UniProtKB
UniProt
RGD
PMID:11834834, PMID:12808468, PMID:15674244 MGI:2667269, RGD:633348 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Opn5 opsin 5 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
G Rcvrn recoverin ISO (MGI:3584028|PMID:15173221) MGI PMID:15173221 MGI:3584028 NCBI chrNW_004936595:2,873,739...2,882,150 JBrowse link
G Rho rhodopsin ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004936602:896,730...901,480 JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
UniProt PMID:22043319 MGI:6230806 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 ISO (MGI:3054118|PMID:15365173) MGI PMID:15365173 MGI:3054118 NCBI chrNW_004936677:1,539,502...1,548,343 JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004936581:387,939...400,740 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859) UniProtKB PMID:17584859 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Pde6c phosphodiesterase 6C ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004936601:1,343,538...1,393,605 JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chrNW_004936602:896,730...901,480 JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 ISO (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)
MGI PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chrNW_004936677:1,539,502...1,548,343 JBrowse link
G Grk1 G protein-coupled receptor kinase 1 ISO (PMID:15946941) UniProtKB PMID:15946941 NCBI chrNW_004936472:152,202...165,134 JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Opn4 opsin 4 ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Pcp2 Purkinje cell protein 2 ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chrNW_004936588:4,681,559...4,683,443 JBrowse link
G Rho rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chrNW_004936602:896,730...901,480 JBrowse link

Term paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.