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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of stimulus
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Accession:GO:0051606 term browser browse the term
Definition:The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.
Synonyms:exact_synonym: stimulus detection
 related_synonym: perception of stimulus;   stimulus sensing


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detection of stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
UniProtKB
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004955412:16,673,401...17,005,082
Ensembl chrNW_004955412:16,669,099...17,005,014
JBrowse link
G Crtam cytotoxic and regulatory T cell molecule ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
HGNC
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chrNW_004955466:2,506,641...2,521,506 JBrowse link
contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor ISO (PMID:9422511) BHF-UCL PMID:9422511 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Tspo translocator protein ISO RGD PMID:18190798 RGD:2317142 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (PMID:17974916) UniProtKB PMID:17974916 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408
JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004955567:789,396...809,597
Ensembl chrNW_004955567:789,182...809,636
JBrowse link
detection of bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naip NLR family apoptosis inhibitory protein ISO (MGI:5289703|PMID:21874021) UniProt PMID:21874021 MGI:5289703 NCBI chrNW_004955575:249,659...283,378 JBrowse link
G Nlrc4 NLR family CARD domain containing 4 ISO (PMID:15107016)
(MGI:5444805|PMID:22885697)
HGNC
UniProt
PMID:15107016, PMID:22885697 MGI:5444805 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:15653568) HGNC PMID:15653568 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO (MGI:3052258|PMID:15282315) MGI PMID:15282315 MGI:3052258 NCBI chrNW_004955556:435,264...539,935
Ensembl chrNW_004955556:435,027...535,941
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004955495:7,785,398...7,792,158
Ensembl chrNW_004955495:7,785,193...7,796,210
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 ISO (PMID:11461926) UniProtKB PMID:11461926 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610
JBrowse link
detection of calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Casr calcium sensing receptor ISO (PMID:27434672) RGD
UniProtKB
PMID:7816802, PMID:27434672 RGD:1298562 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210
JBrowse link
G Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004955420:7,797,404...8,164,199 JBrowse link
G Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004955420:8,428,823...8,445,940
Ensembl chrNW_004955420:8,435,179...8,445,676
JBrowse link
G Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ISO (PMID:10692449) UniProtKB PMID:10692449 NCBI chrNW_004955405:10,559,074...10,615,744
Ensembl chrNW_004955405:10,559,074...10,615,744
JBrowse link
G Ryr2 ryanodine receptor 2 ISO (PMID:10830164) BHF-UCL PMID:10830164 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Stim1 stromal interaction molecule 1 ISO (PMID:16005298) UniProtKB PMID:16005298 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964
JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:22229667 RGD:7205654 NCBI chrNW_004955405:17,840,012...18,372,156
Ensembl chrNW_004955405:17,839,884...18,372,566
JBrowse link
detection of chemical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drgx dorsal root ganglia homeobox ISO (MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:2137781 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248
JBrowse link
detection of chemical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
G LOC102015989 olfactory receptor 4E2 ISO (MGI:6162342|PMID:25901328)
(MGI:6187791|PMID:29659735)
UniProt PMID:25901328, PMID:29659735 MGI:6162342, MGI:6187791 NCBI chrNW_004955550:2,352,164...2,353,090
Ensembl chrNW_004955550:2,352,164...2,353,090
JBrowse link
G LOC102028688 olfactory receptor 15 ISO (MGI:6162342|PMID:25901328) UniProt PMID:25901328 MGI:6162342 NCBI chrNW_004955442:14,000,372...14,005,737
Ensembl chrNW_004955442:14,000,372...14,001,310
JBrowse link
detection of chemical stimulus involved in sensory perception of bitter taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004955573:902,153...910,481
Ensembl chrNW_004955573:899,798...912,272
JBrowse link
G Ca6 carbonic anhydrase 6 ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004955486:4,234,293...4,249,026
Ensembl chrNW_004955486:4,234,235...4,247,876
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:7596440 RGD:1599025 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO RGD PMID:12917372 RGD:1599039 NCBI chrNW_004955435:13,009,147...13,021,968
Ensembl chrNW_004955435:13,009,147...13,021,968
JBrowse link
G Lpo lactoperoxidase ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004955451:4,754,572...4,769,380
Ensembl chrNW_004955451:4,754,468...4,769,553
JBrowse link
G Pigr polymeric immunoglobulin receptor ISO (PMID:24248522) UniProtKB PMID:24248522 NCBI chrNW_004955406:42,456,450...42,474,489
Ensembl chrNW_004955406:42,453,080...42,474,694
JBrowse link
G Plcb2 phospholipase C beta 2 ISO PMID:9860142 UniProt PMID:9860142 RGD:729588 NCBI chrNW_004955416:7,221,326...7,240,743
Ensembl chrNW_004955416:7,218,417...7,240,739
JBrowse link
G Rtp3 receptor transporter protein 3 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004955420:25,545,752...25,550,044 JBrowse link
G Rtp4 receptor transporter protein 4 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004955420:20,435,924...20,459,440 JBrowse link
G Tas2r16 taste 2 receptor member 16 ISO (PMID:16720576), (PMID:20022913) HGNC PMID:16720576, PMID:20022913 NCBI chrNW_004955479:4,591,015...4,591,920 JBrowse link
G Tas2r3 taste 2 receptor member 3 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:1,799,438...1,800,388 JBrowse link
G Tas2r38 taste 2 receptor member 38 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:1,659,692...1,662,712 JBrowse link
G Tas2r4 taste 2 receptor member 4 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:1,790,395...1,791,294 JBrowse link
G Tas2r40 taste 2 receptor member 40 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:415,607...416,569 JBrowse link
G Tas2r5 taste 2 receptor member 5 ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:1,775,222...1,776,226 JBrowse link
G Tas2r60 taste 2 receptor member 60 NOT ISO (PMID:20022913) UniProtKB PMID:20022913 NCBI chrNW_004955494:220,847...221,851 JBrowse link
detection of chemical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838)
(MGI:2450005|PMID:12060708)
MGI PMID:11754838, PMID:12060708 MGI:2155574, MGI:2450005 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO (MGI:3623714|PMID:16630838), (MGI:3794274|PMID:18297068)
(MGI:3692354|PMID:16564016), (MGI:3790589|PMID:18398506)
(MGI:3790902|PMID:18272293)
MGI PMID:16564016, PMID:16630838, PMID:18272293, PMID:18297068, PMID:18398506 MGI:3623714, MGI:3692354, MGI:3790589, MGI:3790902, MGI:3794274 NCBI chrNW_004955444:7,876,284...7,922,010
Ensembl chrNW_004955444:7,876,429...7,921,372
JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:3794274|PMID:18297068)
(MGI:3790902|PMID:18272293)
MGI PMID:18272293, PMID:18297068 MGI:3790902, MGI:3794274 NCBI chrNW_004955467:13,221,391...13,239,089
Ensembl chrNW_004955467:13,221,391...13,239,089
JBrowse link
detection of chemical stimulus involved in sensory perception of smell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102015989 olfactory receptor 4E2 ISO (MGI:5314551|PMID:22328155), (MGI:6154400|PMID:25185561)
(MGI:6162372|PMID:27019154)
UniProt PMID:22328155, PMID:25185561, PMID:27019154 MGI:5314551, MGI:6154400, MGI:6162372 NCBI chrNW_004955550:2,352,164...2,353,090
Ensembl chrNW_004955550:2,352,164...2,353,090
JBrowse link
G LOC102028688 olfactory receptor 15 ISO (MGI:6187791|PMID:29659735) UniProt PMID:29659735 MGI:6187791 NCBI chrNW_004955442:14,000,372...14,005,737
Ensembl chrNW_004955442:14,000,372...14,001,310
JBrowse link
detection of chemical stimulus involved in sensory perception of sour taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel ISO (MGI:5315344|PMID:16891422) BHF-UCL PMID:16891422 MGI:5315344 NCBI chrNW_004955507:6,145,981...6,167,152
Ensembl chrNW_004955507:6,146,825...6,166,976
JBrowse link
detection of chemical stimulus involved in sensory perception of sweet taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tas1r2 taste 1 receptor member 2 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004955527:377,269...392,833
Ensembl chrNW_004955527:376,083...392,282
JBrowse link
G Tas1r3 taste 1 receptor member 3 ISO (PMID:16720576) HGNC PMID:16720576 NCBI chrNW_004955486:9,469,954...9,475,421
Ensembl chrNW_004955486:9,470,626...9,473,780
JBrowse link
detection of chemical stimulus involved in sensory perception of taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel ISO (MGI:5912987|PMID:28553944) UniProt PMID:28553944 MGI:5912987 NCBI chrNW_004955507:6,145,981...6,167,152
Ensembl chrNW_004955507:6,146,825...6,166,976
JBrowse link
detection of cold stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grik2 glutamate ionotropic receptor kainate type subunit 2 ISO (MGI:6414684|PMID:31474366) UniProt PMID:31474366 MGI:6414684 NCBI chrNW_004955411:27,096,214...27,759,503
Ensembl chrNW_004955411:27,103,470...27,801,177
JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Tlr6 toll like receptor 6 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942
JBrowse link
detection of DNA damage stimulus involved in DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 ISO (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
detection of glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gck glucokinase ISO (PMID:12941786)
in ventromedial hypothalamic neurons
PMID:17470517
UniProtKB
RGD
BHF-UCL
PMID:12941786, PMID:16443775, PMID:17470517 RGD:1601297, RGD:8554539 NCBI chrNW_004955456:7,784,269...7,838,260
Ensembl chrNW_004955456:7,783,760...7,842,129
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO PMID:21108535 BHF-UCL PMID:21108535 RGD:8553608 NCBI chrNW_004955497:7,281,886...7,307,969 JBrowse link
detection of gravity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nox3 NADPH oxidase 3 ISO (MGI:1351720|PMID:10491954) MGI PMID:10491954 MGI:1351720 NCBI chrNW_004955439:6,764,693...6,820,278
Ensembl chrNW_004955439:6,764,693...6,820,278
JBrowse link
G Otop1 otopetrin 1 ISO (MGI:2654297|PMID:12651873) MGI PMID:12651873 MGI:2654297 NCBI chrNW_004955514:5,407,931...5,436,547
Ensembl chrNW_004955514:5,407,946...5,435,605
JBrowse link
detection of hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694
JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180
JBrowse link
detection of hypoxic conditions in blood by carotid body chemoreceptor signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx2 purinergic receptor P2X 2 ISO (MGI:2682434|PMID:14672995) MGI PMID:14672995 MGI:2682434 NCBI chrNW_004955482:418,101...422,058
Ensembl chrNW_004955482:419,213...421,583
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004955514:234,972...279,420
Ensembl chrNW_004955514:234,972...279,420
JBrowse link
G Rho rhodopsin ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Best1 bestrophin 1 ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004955511:5,773,025...5,783,800
Ensembl chrNW_004955511:5,773,670...5,780,540
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (PMID:7571473) UniProtKB PMID:7571473 NCBI chrNW_004955543:692,035...717,364
Ensembl chrNW_004955543:692,035...717,364
JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ISO (PMID:17033974) UniProtKB PMID:17033974 NCBI chrNW_004955454:4,329,520...4,430,460
Ensembl chrNW_004955454:4,331,370...4,430,508
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004955440:17,364,996...17,497,446 JBrowse link
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) CACAO PMID:21680557 MGI:5141557 NCBI chrNW_004955430:6,402,622...6,440,154
Ensembl chrNW_004955430:6,402,701...6,439,985
JBrowse link
G Cep250 centrosomal protein 250 ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chrNW_004955422:25,932,377...25,978,524 JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858) MGI PMID:22447858 MGI:5315300 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Gja10 gap junction protein alpha 10 ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chrNW_004955411:16,586,673...16,601,999
Ensembl chrNW_004955411:16,593,576...16,595,042
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859)
(MGI:3772743|PMID:18171936)
UniProtKB
MGI
PMID:17584859, PMID:18171936 MGI:3772743 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (PMID:12077706)
(MGI:3714271|PMID:17065522)
UniProtKB
MGI
PMID:12077706, PMID:17065522 MGI:3714271 NCBI chrNW_004955435:13,009,147...13,021,968
Ensembl chrNW_004955435:13,009,147...13,021,968
JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO (PMID:17405131) UniProtKB PMID:17405131 NCBI chrNW_004955408:1,421,132...1,432,010
Ensembl chrNW_004955408:1,421,132...1,433,622
JBrowse link
G Gucy2f guanylate cyclase 2F, retinal ISO (MGI:3708225|PMID:17255100) CACAO PMID:17255100 MGI:3708225 NCBI chrNW_004955490:6,331,247...6,437,563
Ensembl chrNW_004955490:6,331,247...6,437,563
JBrowse link
G Prph2 peripherin 2 ISO (MGI:5905515|PMID:28053051)
(MGI:6305433|PMID:26420485)
(MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485)
MGI PMID:26420485, PMID:28053051 MGI:5905515, MGI:6305433 NCBI chrNW_004955437:8,784,211...8,794,789
Ensembl chrNW_004955437:8,782,183...8,795,017
JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chrNW_004955507:112,342...120,050
Ensembl chrNW_004955507:108,669...120,584
JBrowse link
G Reep6 receptor accessory protein 6 ISO (PMID:27889058) UniProtKB PMID:27889058 NCBI chrNW_004955764:17,640...22,996
Ensembl chrNW_004955764:3,793...23,152
JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO (MGI:3027216|PMID:14625292) MGI PMID:14625292 MGI:3027216 NCBI chrNW_004955468:5,311,318...5,313,612
Ensembl chrNW_004955468:5,312,880...5,313,587
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:5905515|PMID:28053051) MGI PMID:28053051 MGI:5905515 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (PMID:21521437) CACAO PMID:21521437 NCBI chrNW_004955550:2,015,319...2,073,627
Ensembl chrNW_004955550:2,021,838...2,073,498
JBrowse link
G Sema5a semaphorin 5A ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004955504:6,343,747...6,691,945
Ensembl chrNW_004955504:6,350,866...6,762,104
JBrowse link
G Sema5b semaphorin 5B ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004955427:22,109,946...22,219,497
Ensembl chrNW_004955427:22,109,607...22,180,602
JBrowse link
G Tulp1 TUB like protein 1 ISO (PMID:15557452) UniProtKB PMID:15557452 NCBI chrNW_004955437:3,405,218...3,417,079 JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 ISO (PMID:19252480) UniProtKB PMID:19252480 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529
JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004955482:4,813,502...4,836,479
Ensembl chrNW_004955482:4,813,955...4,837,392
JBrowse link
G Tlr4 toll like receptor 4 ISO (PMID:19252480)
(MGI:5913054|PMID:28098138)
UniProtKB
UniProt
PMID:19252480, PMID:28098138 MGI:5913054 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
detection of mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chrNW_004955476:5,702,888...6,060,545
Ensembl chrNW_004955476:5,813,071...6,060,545
JBrowse link
G Jup junction plakoglobin ISO (PMID:18937352) BHF-UCL PMID:18937352 NCBI chrNW_004955451:15,993,055...16,004,152
Ensembl chrNW_004955451:15,989,180...16,004,155
JBrowse link
G Piezo1 piezo type mechanosensitive ion channel component 1 ISO (MGI:4833892|PMID:20813920) MGI PMID:20813920 MGI:4833892 NCBI chrNW_004955541:2,618,167...2,655,349
Ensembl chrNW_004955541:2,618,438...2,643,771
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (MGI:3512725|PMID:15545994)
(MGI:2449360|PMID:12514735)
MGI PMID:12514735, PMID:15545994 MGI:2449360, MGI:3512725 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:2449360|PMID:12514735) MGI PMID:12514735 MGI:2449360 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
detection of mechanical stimulus involved in equilibrioception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh15 protocadherin related 15 ISO (MGI:3616414|PMID:16481439) MGI PMID:16481439 MGI:3616414 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
detection of mechanical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 ISO (MGI:2180082|PMID:11069180) MGI PMID:11069180 MGI:2180082 NCBI chrNW_004955481:7,850,730...8,093,255
Ensembl chrNW_004955481:7,850,710...8,871,794
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO RGD PMID:12591163 RGD:11570504 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:21037532 RGD:8549460 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Piezo2 piezo type mechanosensitive ion channel component 2 ISO (MGI:5574426|PMID:24717433) UniProt PMID:24717433 MGI:5574426 NCBI chrNW_004955402:1,534,619...1,873,143
Ensembl chrNW_004955402:1,650,726...1,871,876
JBrowse link
G Serpine2 serpin family E member 2 ISO (MGI:3521551|PMID:15509762) MGI PMID:15509762 MGI:3521551 NCBI chrNW_004955453:10,049,822...10,076,155
Ensembl chrNW_004955453:10,027,104...10,076,645
JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 NOT ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004955422:16,064,526...16,213,614
Ensembl chrNW_004955422:16,064,475...16,214,360
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2450005|PMID:12060708)
(MGI:2155574|PMID:11754838)
MGI PMID:11754838, PMID:12060708 MGI:2155574, MGI:2450005 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:28012171 RGD:13782150 NCBI chrNW_004955412:18,596,643...18,620,089
Ensembl chrNW_004955412:18,596,643...18,620,362
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chrNW_004955500:7,676,331...7,685,174
Ensembl chrNW_004955500:7,672,828...7,687,420
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004955546:1,929,269...1,941,690
Ensembl chrNW_004955546:1,929,269...1,941,690
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212, PMID:28108674 RGD:12910551, RGD:13463594 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A NOT ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004955413:10,358,931...10,780,004
Ensembl chrNW_004955413:10,376,597...10,779,145
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D NOT ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chrNW_004955559:2,042,723...2,080,706 JBrowse link
G Grm8 glutamate metabotropic receptor 8 ISO RGD PMID:18533199 RGD:6771181 NCBI chrNW_004955479:7,520,537...8,279,942
Ensembl chrNW_004955479:7,520,396...8,279,755
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO RGD PMID:21843960 RGD:6482179 NCBI chrNW_004955425:2,321,420...2,420,420
Ensembl chrNW_004955425:2,321,420...2,420,530
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:19853379 RGD:2315887 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634
JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:18234883 RGD:2303705 NCBI chrNW_004955446:14,309,516...14,421,991
Ensembl chrNW_004955446:14,309,349...14,422,170
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:5494919|PMID:23473320) UniProt PMID:23473320 MGI:5494919 NCBI chrNW_004955413:2,703,030...2,711,612
Ensembl chrNW_004955413:2,703,030...2,711,612
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:21238854 RGD:9835398 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Phf24 PHD finger protein 24 ISO (MGI:5616490|PMID:25242222) MGI PMID:25242222 MGI:5616490 NCBI chrNW_004955472:1,186,021...1,204,018
Ensembl chrNW_004955472:1,185,110...1,204,040
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 ISO (MGI:5796061|PMID:27281198) UniProt PMID:27281198 MGI:5796061 NCBI chrNW_004955449:8,072,910...8,220,763
Ensembl chrNW_004955449:8,160,986...8,221,951
JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tmem120a transmembrane protein 120A ISO (MGI:6414708|PMID:32084332) UniProt PMID:32084332 MGI:6414708 NCBI chrNW_004955456:14,748,666...14,754,270
Ensembl chrNW_004955456:14,747,621...14,754,270
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:16675114 RGD:7387300 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO (MGI:3623714|PMID:16630838) MGI PMID:16630838 MGI:3623714 NCBI chrNW_004955444:7,876,284...7,922,010
Ensembl chrNW_004955444:7,876,429...7,921,372
JBrowse link
detection of mechanical stimulus involved in sensory perception of sound term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:3629345|PMID:16775142) MGI PMID:16775142 MGI:3629345 NCBI chrNW_004955418:20,603,323...21,039,891 JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO (MGI:3771935|PMID:18077337) MGI PMID:18077337 MGI:3771935 NCBI chrNW_004955414:19,487,840...19,495,368
Ensembl chrNW_004955414:19,487,862...19,493,034
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO (MGI:3771935|PMID:18077337) MGI PMID:18077337 MGI:3771935 NCBI chrNW_004955443:7,148,604...7,157,824
Ensembl chrNW_004955443:7,148,604...7,157,824
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO (PMID:10889003) UniProtKB PMID:10889003 NCBI chrNW_004955435:7,352,617...7,545,235
Ensembl chrNW_004955435:7,352,617...7,545,235
JBrowse link
G Hpn hepsin ISO (MGI:3719967|PMID:17620368), (MGI:5306554|PMID:20683358), (MGI:5308539|PMID:17918732) UniProt PMID:17620368, PMID:17918732, PMID:20683358 MGI:3719967, MGI:5306554, MGI:5308539 NCBI chrNW_004955468:4,384,630...4,399,881
Ensembl chrNW_004955468:4,384,630...4,400,379
JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:3530388|PMID:15731517) UniProt PMID:15731517 MGI:3530388 NCBI chrNW_004955447:16,149,014...16,226,151
Ensembl chrNW_004955447:16,148,605...16,226,734
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:5468200|PMID:23217710) MGI PMID:23217710 MGI:5468200 NCBI chrNW_004955437:3,644,448...3,650,688 JBrowse link
G Mkks McKusick-Kaufman syndrome ISO (MGI:3607949|PMID:16170314) MGI PMID:16170314 MGI:3607949 NCBI chrNW_004955415:20,292,311...20,315,850
Ensembl chrNW_004955415:20,292,663...20,300,797
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:3712581|PMID:17523175) MGI PMID:17523175 MGI:3712581 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Pcdh15 protocadherin related 15 ISO (MGI:3616414|PMID:16481439)
(MGI:4950645|PMID:21427143)
MGI PMID:16481439, PMID:21427143 MGI:3616414, MGI:4950645 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Pjvk pejvakin ISO (MGI:5907777|PMID:28089576) MGI PMID:28089576 MGI:5907777 NCBI chrNW_004955403:18,386,705...18,393,771
Ensembl chrNW_004955403:18,386,705...18,393,771
JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q ISO (MGI:5315778|PMID:22357859) MGI PMID:22357859 MGI:5315778 NCBI chrNW_004955405:19,123,905...19,318,619
Ensembl chrNW_004955405:19,123,905...19,318,619
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chrNW_004955415:1,138,297...1,219,241
Ensembl chrNW_004955415:1,137,327...1,219,241
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
G Strc stereocilin ISO (MGI:3818235|PMID:18849963) MGI PMID:18849963 MGI:3818235 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link
G Tmc1 transmembrane channel like 1 ISO (MGI:5515249|PMID:23871232)
(MGI:5320864|PMID:22105175)
MGI PMID:22105175, PMID:23871232 MGI:5320864, MGI:5515249 NCBI chrNW_004955434:398,734...500,378
Ensembl chrNW_004955434:398,829...529,810
JBrowse link
G Tmc2 transmembrane channel like 2 ISO (PMID:11850618)
(MGI:5320864|PMID:22105175)
UniProtKB
MGI
PMID:11850618, PMID:22105175 MGI:5320864 NCBI chrNW_004955415:13,545,266...13,626,125
Ensembl chrNW_004955415:13,565,935...13,625,843
JBrowse link
G Whrn whirlin ISO (MGI:4454934|PMID:20502675) UniProt PMID:20502675 MGI:4454934 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link
detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:5494919|PMID:23473320) UniProt PMID:23473320 MGI:5494919 NCBI chrNW_004955413:2,703,030...2,711,612
Ensembl chrNW_004955413:2,703,030...2,711,612
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 ISO (MGI:3846268|PMID:19279663) UniProt PMID:19279663 MGI:3846268 NCBI chrNW_004955422:20,780,765...20,788,988
Ensembl chrNW_004955422:20,780,765...20,788,836
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 ISO (PMID:12527755), (PMID:15998797) MGI PMID:12527755, PMID:15998797 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
detection of muscle stretch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (MGI:5613732|PMID:25257915) BHF-UCL PMID:25257915 MGI:5613732 NCBI chrNW_004955561:326,008...335,911
Ensembl chrNW_004955561:325,944...335,914
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 ISO (PMID:12507422)
(MGI:2447926|PMID:12507422)
BHF-UCL PMID:12507422 MGI:2447926 NCBI chrNW_004955476:155,913...176,122
Ensembl chrNW_004955476:154,917...176,616
JBrowse link
G Tcap titin-cap ISO (PMID:12507422) BHF-UCL PMID:12507422 NCBI chrNW_004955451:14,413,657...14,414,735
Ensembl chrNW_004955451:14,413,657...14,414,735
JBrowse link
G Ttn titin ISO (PMID:18765796) MGI PMID:18765796 NCBI chrNW_004955403:18,057,344...18,328,389 JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chrNW_004955456:5,497,126...5,582,342 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Tmem107 transmembrane protein 107 ISO (MGI:6405644|PMID:31887266) MGI PMID:31887266 MGI:6405644 NCBI chrNW_004955467:8,777,078...8,779,164
Ensembl chrNW_004955467:8,777,071...8,779,164
JBrowse link
detection of oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sod2 superoxide dismutase 2 ISO (MGI:1930860|PMID:11156968) MGI PMID:11156968 MGI:1930860 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
detection of stimulus involved in cell cycle checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trex1 three prime repair exonuclease 1 ISO (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
detection of temperature stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chrNW_004955476:5,702,888...6,060,545
Ensembl chrNW_004955476:5,813,071...6,060,545
JBrowse link
G Drgx dorsal root ganglia homeobox ISO (MGI:2137781|PMID:11498051) MGI PMID:11498051 MGI:2137781 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248
JBrowse link
G Ngfr nerve growth factor receptor ISO (MGI:1098517|PMID:1317267) MGI PMID:1317267 MGI:1098517 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
detection of temperature stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2155574|PMID:11754838) MGI PMID:11754838 MGI:2155574 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO RGD PMID:20065990 RGD:5129094 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Ano1 anoctamin 1 ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004955422:16,064,526...16,213,614
Ensembl chrNW_004955422:16,064,475...16,214,360
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:21926413 RGD:5509871 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Asic3 acid sensing ion channel subunit 3 ISO (MGI:2450005|PMID:12060708) MGI PMID:12060708 MGI:2450005 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004955546:1,929,269...1,941,690
Ensembl chrNW_004955546:1,929,269...1,941,690
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:5294537|PMID:19025592) UniProt PMID:19025592 MGI:5294537 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Lxn latexin ISO (MGI:3619806|PMID:16469302) MGI PMID:16469302 MGI:3619806 NCBI chrNW_004955448:9,414,721...9,421,575
Ensembl chrNW_004955448:9,414,721...9,421,575
JBrowse link
G Mmp24 matrix metallopeptidase 24 ISO (MGI:4361769|PMID:19805319) UniProt PMID:19805319 MGI:4361769 NCBI chrNW_004955422:26,128,403...26,154,285
Ensembl chrNW_004955422:26,126,929...26,154,285
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chrNW_004955524:961,232...965,012 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15733655 RGD:9743979 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:17179954 RGD:9835416 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Prdm12 PR/SET domain 12 ISO (PMID:26005867) MGI PMID:26005867 NCBI chrNW_004955513:612,566...627,848
Ensembl chrNW_004955513:612,566...627,323
JBrowse link
G Tac1 tachykinin precursor 1 ISO (PMID:17655832) UniProt PMID:17655832 NCBI chrNW_004955432:13,991,647...13,999,665
Ensembl chrNW_004955432:13,991,414...13,999,728
JBrowse link
G Tac4 tachykinin precursor 4 ISO PMID:17655832
(PMID:17655832)
UniProt
UniProtKB
PMID:17655832 RGD:14695074 NCBI chrNW_004955451:11,755,645...11,763,281 JBrowse link
G Tlr4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chrNW_004955467:13,221,391...13,239,089
Ensembl chrNW_004955467:13,221,391...13,239,089
JBrowse link
detection of temperature stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn4 opsin 4 ISO (MGI:6407235|PMID:31924821) MGI PMID:31924821 MGI:6407235 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Rho rhodopsin ISO (MGI:6407235|PMID:31924821) MGI PMID:31924821 MGI:6407235 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 ISO (MGI:3834285|PMID:18455988) MGI PMID:18455988 MGI:3834285 NCBI chrNW_004955467:13,221,391...13,239,089
Ensembl chrNW_004955467:13,221,391...13,239,089
JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll like receptor 1 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955443:8,442,419...8,450,318
Ensembl chrNW_004955443:8,447,956...8,450,382
JBrowse link
G Tlr2 toll like receptor 2 ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
detection of tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crtam cytotoxic and regulatory T cell molecule ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)
HGNC
UniProt
PMID:15811952 MGI:3689781 NCBI chrNW_004955412:23,676,171...23,706,250
Ensembl chrNW_004955412:23,675,906...23,709,262
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase ISO (MGI:2384247|PMID:12149233) MGI PMID:12149233 MGI:2384247 NCBI chrNW_004955402:41,902,868...41,938,099
Ensembl chrNW_004955402:41,902,868...41,938,174
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx6 iroquois homeobox 6 ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004955433:12,889,025...12,895,090
Ensembl chrNW_004955433:12,889,001...12,895,121
JBrowse link
detection of wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO (MGI:3522465|PMID:12500195) MGI PMID:12500195 MGI:3522465 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590
JBrowse link
DNA damage response, detection of DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap410 cilia and flagella associated protein 410 ISO (PMID:26290490) UniProtKB PMID:26290490 NCBI chrNW_004955407:41,120,820...41,128,089
Ensembl chrNW_004955407:41,121,048...41,126,996
JBrowse link
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ISO RGD PMID:9605323 RGD:633115 NCBI chrNW_004955472:2,604,002...2,618,033 JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (PMID:19465398) UniProtKB PMID:19465398 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Nek1 NIMA related kinase 1 ISO (PMID:15604234) UniProtKB PMID:15604234 NCBI chrNW_004955403:36,710,248...36,878,901
Ensembl chrNW_004955403:36,720,162...36,881,891
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:15857403 RGD:1601082 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:10446192) UniProtKB PMID:10446192 NCBI chrNW_004955559:1,064,924...1,070,120 JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:23911537)
(PMID:22510408)
UniProtKB PMID:22510408, PMID:23911537 NCBI chrNW_004955414:16,436,899...16,442,325
Ensembl chrNW_004955414:16,436,899...16,443,073
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (PMID:19234109) UniProtKB PMID:19234109 NCBI chrNW_004955483:5,076,664...5,077,059 JBrowse link
negative regulation of cell growth involved in contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr2 cadherin related family member 2 ISO (PMID:12117771) UniProtKB PMID:12117771 NCBI chrNW_004955408:28,832,362...28,871,345
Ensembl chrNW_004955408:28,832,325...28,875,534
JBrowse link
negative regulation of cell proliferation involved in contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dach1 dachshund family transcription factor 1 ISO (MGI:3719935|PMID:17182846) MGI PMID:17182846 MGI:3719935 NCBI chrNW_004955404:34,739,780...35,118,037
Ensembl chrNW_004955404:34,740,026...35,137,490
JBrowse link
G Fap fibroblast activation protein alpha ISO (MGI:3047166|PMID:15133496) UniProt PMID:15133496 MGI:3047166 NCBI chrNW_004955449:11,623,838...11,694,256
Ensembl chrNW_004955449:11,623,741...11,694,335
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO (PMID:12912914) UniProtKB PMID:12912914 NCBI chrNW_004955414:14,365,325...14,447,470
Ensembl chrNW_004955414:14,365,157...14,450,611
JBrowse link
G Srpx sushi repeat containing protein X-linked ISO (MGI:3691893|PMID:12049817) MGI PMID:12049817 MGI:3691893 NCBI chrNW_004955601:286,092...364,235
Ensembl chrNW_004955601:286,069...364,235
JBrowse link
negative regulation of detection of glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
negative regulation of detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chrNW_004955500:7,676,331...7,685,174
Ensembl chrNW_004955500:7,672,828...7,687,420
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO (MGI:3772638|PMID:11853756) MGI PMID:11853756 MGI:3772638 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Asic2 acid sensing ion channel subunit 2 ISO (MGI:3042539|PMID:14762118) MGI PMID:14762118 MGI:3042539 NCBI chrNW_004955481:7,850,730...8,093,255
Ensembl chrNW_004955481:7,850,710...8,871,794
JBrowse link
G Cabp4 calcium binding protein 4 ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004955422:18,023,639...18,028,845
Ensembl chrNW_004955422:18,023,639...18,028,845
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO (MGI:3527312|PMID:15634774) MGI PMID:15634774 MGI:3527312 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI PMID:11095744, PMID:11853756, PMID:15073279, PMID:16249514, PMID:17881533, PMID:18367617 MGI:1928441, MGI:3609280, MGI:3615719, MGI:3757777, MGI:3772638, MGI:3778702 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) MGI PMID:17408617, PMID:18171936 MGI:3761397, MGI:3772743 NCBI chrNW_004955435:13,009,147...13,021,968
Ensembl chrNW_004955435:13,009,147...13,021,968
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chrNW_004955432:10,653,508...10,657,811
Ensembl chrNW_004955432:10,643,674...10,658,933
JBrowse link
G Guca1b guanylate cyclase activator 1B ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703, PMID:15173221 MGI:2664110, MGI:3584028 NCBI chrNW_004955437:8,384,692...8,390,946
Ensembl chrNW_004955437:8,382,299...8,390,946
JBrowse link
G Opn4 opsin 4 ISO (PMID:15674244)
(MGI:2667269|PMID:12808468)
UniProtKB
UniProt
RGD
PMID:11834834, PMID:12808468, PMID:15674244 MGI:2667269, RGD:633348 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Opn5 opsin 5 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Rcvrn recoverin ISO (MGI:3584028|PMID:15173221) MGI PMID:15173221 MGI:3584028 NCBI chrNW_004955467:7,220,237...7,236,450
Ensembl chrNW_004955467:7,220,237...7,236,450
JBrowse link
G Rho rhodopsin ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
UniProt PMID:22043319 MGI:6230806 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 ISO (MGI:3054118|PMID:15365173) MGI PMID:15365173 MGI:3054118 NCBI chrNW_004955467:11,952,940...11,962,147
Ensembl chrNW_004955467:11,952,495...11,962,153
JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004955599:349,744...356,714
Ensembl chrNW_004955599:349,744...356,714
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (PMID:17584859) UniProtKB PMID:17584859 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Pde6c phosphodiesterase 6C ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004955507:129,678...179,586
Ensembl chrNW_004955507:129,678...179,305
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 ISO (MGI:3054134|PMID:15365178)
(MGI:3054118|PMID:15365173)
MGI PMID:15365173, PMID:15365178 MGI:3054118, MGI:3054134 NCBI chrNW_004955467:11,952,940...11,962,147
Ensembl chrNW_004955467:11,952,495...11,962,153
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 ISO (PMID:15946941) UniProtKB PMID:15946941 NCBI chrNW_004955404:343,009...353,683
Ensembl chrNW_004955404:343,009...353,683
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Opn4 opsin 4 ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Pcp2 Purkinje cell protein 2 ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chrNW_004955563:1,625,249...1,628,776
Ensembl chrNW_004955563:1,625,254...1,628,776
JBrowse link
G Rho rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link

Term paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.