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ONTOLOGY REPORT - ANNOTATIONS


Term:proteolysis involved in protein catabolic process
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Accession:GO:0051603 term browser browse the term
Definition:The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms:exact_synonym: peptidolysis involved in cellular protein catabolic process;   peptidolysis involved in cellular protein catabolism;   proteolysis involved in cellular protein catabolic process
 related_synonym: peptidolysis during cellular protein catabolic process;   peptidolysis during cellular protein catabolism;   proteolysis during cellular protein catabolic process;   proteolysis during cellular protein catabolism


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proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in ISO (PMID:18485748)
(PMID:16611630)
BHF-UCL PMID:16611630 PMID:18485748 NCBI chrNW_004955426:19,146,288...19,471,880
Ensembl chrNW_004955426:19,150,343...19,471,534
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in ISO (PMID:18485748) BHF-UCL PMID:18485748 NCBI chrNW_004955450:525,313...581,006
Ensembl chrNW_004955450:529,999...577,621
JBrowse link
G Capn2 calpain 2 involved_in ISO (PMID:12150984) BHF-UCL PMID:12150984 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328
JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:10521396)
(PMID:32971525)
BHF-UCL
UniProt
PMID:10521396 PMID:32971525 NCBI chrNW_004955403:322,082...348,591
Ensembl chrNW_004955403:322,555...347,053
JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in ISO (PMID:11923310) UniProt PMID:11923310 NCBI chrNW_004955495:3,224,968...3,233,482
Ensembl chrNW_004955495:3,223,709...3,233,562
JBrowse link
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X involved_in ISO (PMID:16115876) UniProt PMID:16115876 NCBI chrNW_004955450:10,256,124...10,289,832
Ensembl chrNW_004955450:10,256,124...10,289,832
JBrowse link
G Cpa1 carboxypeptidase A1 ISO RGD PMID:15865404 RGD:1578424 NCBI chrNW_004955479:11,011,928...11,017,908
Ensembl chrNW_004955479:11,011,928...11,017,908
JBrowse link
G Ctsb cathepsin B involved_in ISO (PMID:22952693)
(PMID:12782676)
BHF-UCL
UniProt
PMID:12782676 PMID:22952693 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809
JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:11082042), (PMID:22952693)
(PMID:12782676)
BHF-UCL
UniProt
PMID:11082042 PMID:12782676 PMID:22952693 NCBI chrNW_004955588:149,036...158,093
Ensembl chrNW_004955588:148,748...158,093
JBrowse link
G Ctss cathepsin S involved_in ISO (PMID:22952693) BHF-UCL PMID:22952693 NCBI chrNW_004955413:99,279...124,793
Ensembl chrNW_004955413:99,159...124,042
JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISO (PMID:18923430) BHF-UCL PMID:18923430 NCBI chrNW_004955404:14,361,540...14,412,533
Ensembl chrNW_004955404:14,360,832...14,412,533
JBrowse link
G Fap fibroblast activation protein alpha involved_in ISO (PMID:10593948) UniProt PMID:10593948 NCBI chrNW_004955449:11,623,838...11,694,256
Ensembl chrNW_004955449:11,623,741...11,694,335
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 acts_upstream_of_or_within ISO (PMID:23541922) MGI PMID:23541922 NCBI chrNW_004955495:5,481,914...5,503,690
Ensembl chrNW_004955495:5,481,916...5,505,521
JBrowse link
G Gzma granzyme A involved_in ISO (PMID:12524539), (PMID:32299851) UniProt PMID:12524539 PMID:32299851 NCBI chrNW_004955446:12,560,831...12,568,023
Ensembl chrNW_004955446:12,560,658...12,568,053
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:18923430) BHF-UCL PMID:18923430 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Ide insulin degrading enzyme involved_in ISO degradation of insulin, beta-endorphin and amyloid-beta peptide
(PMID:9830016)
RGD
UniProt
PMID:9830016 PMID:15749695 RGD:1626704 NCBI chrNW_004955425:819,461...926,440
Ensembl chrNW_004955425:847,615...926,318
JBrowse link
G Lgmn legumain involved_in ISO (PMID:17350006) UniProt PMID:17350006 NCBI chrNW_004955438:14,905,856...14,938,722
Ensembl chrNW_004955438:14,905,856...14,939,256
JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO (PMID:17420247), (PMID:8248235) UniProt PMID:8248235 PMID:17420247 NCBI chrNW_004955495:3,712,173...3,729,556
Ensembl chrNW_004955495:3,712,199...3,731,301
JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (PMID:31133753) UniProt PMID:31133753 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:25417702) CAFA PMID:25417702 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Plg plasminogen ISO RGD PMID:7864083 PMID:12928439 RGD:1299253 RGD:2301095 NCBI chrNW_004955439:20,317,814...20,366,724
Ensembl chrNW_004955439:20,317,552...20,366,475
JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in ISO (PMID:16845397) BHF-UCL PMID:16845397 NCBI chrNW_004955409:25,751,578...25,787,533
Ensembl chrNW_004955409:25,750,270...25,787,533
JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chrNW_004955413:33,721,984...33,728,088 JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955470:2,182,163...2,262,804
Ensembl chrNW_004955470:2,183,766...2,262,900
JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955428:945,238...1,029,818
Ensembl chrNW_004955428:941,659...1,029,799
JBrowse link
G Anapc13 anaphase promoting complex subunit 13 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955501:4,096,026...4,103,212
Ensembl chrNW_004955501:4,096,026...4,103,212
JBrowse link
G Anapc15 anaphase promoting complex subunit 15 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955414:19,218,727...19,222,138
Ensembl chrNW_004955414:19,218,727...19,222,138
JBrowse link
G Anapc16 anaphase promoting complex subunit 16 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955437:19,367,662...19,381,607
Ensembl chrNW_004955437:19,367,662...19,381,603
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955513:5,183,472...5,194,253
Ensembl chrNW_004955513:5,183,472...5,194,253
JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955443:19,620,480...19,653,179
Ensembl chrNW_004955443:19,620,480...19,653,200
JBrowse link
G Anapc5 anaphase promoting complex subunit 5 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955482:6,951,496...6,980,498
Ensembl chrNW_004955482:6,951,228...6,980,382
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955482:7,302,853...7,328,145
Ensembl chrNW_004955482:7,302,455...7,328,145
JBrowse link
G Cdc16 cell division cycle 16 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955404:47,126...71,602
Ensembl chrNW_004955404:45,383...71,466
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO (PMID:17443180)
(PMID:18753608)
UniProt
AgBase
PMID:17443180 PMID:18753608 NCBI chrNW_004955537:2,941,265...2,945,158
Ensembl chrNW_004955537:2,941,265...2,945,158
JBrowse link
G Cdc23 cell division cycle 23 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955418:2,194,937...2,221,928
Ensembl chrNW_004955418:2,194,689...2,221,928
JBrowse link
G Cdc26 cell division cycle 26 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955419:14,206,167...14,218,487
Ensembl chrNW_004955419:14,205,691...14,218,595
JBrowse link
G Cdc27 cell division cycle 27 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955478:9,927,871...10,002,020
Ensembl chrNW_004955478:9,927,871...10,002,020
JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO (PMID:10500095) MGI PMID:10500095 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976
JBrowse link
G Ecrg4 ECRG4 augurin precursor acts_upstream_of_or_within ISO (PMID:20404145) MGI PMID:20404145 NCBI chrNW_004955470:10,646,585...10,655,311
Ensembl chrNW_004955470:10,645,750...10,659,388
JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734
Ensembl chrNW_004955541:1,811,010...1,828,724
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO (PMID:18753608)
(PMID:14701726), (PMID:18662541), (PMID:21596315)
AgBase
UniProt
PMID:14701726 PMID:18662541 PMID:18753608 PMID:21596315 NCBI chrNW_004955495:5,481,914...5,503,690
Ensembl chrNW_004955495:5,481,916...5,505,521
JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:19822757), (PMID:9122200) UniProt PMID:9122200 PMID:19822757 NCBI chrNW_004955445:11,474,826...11,479,479
Ensembl chrNW_004955445:11,469,063...11,478,759
JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S involved_in ISO (PMID:19820702), (PMID:19822757) UniProt PMID:19820702 PMID:19822757 NCBI chrNW_004955567:854,518...859,606
Ensembl chrNW_004955567:854,518...859,993
JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in ISO (PMID:33406423), (PMID:33909987)
(PMID:33909987)
UniProt PMID:33406423 PMID:33909987 NCBI chrNW_004955409:12,855,655...12,901,673
Ensembl chrNW_004955409:12,855,749...12,900,702
JBrowse link
cytoplasm protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955527:57,335...185,727
Ensembl chrNW_004955527:57,335...185,727
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) UniProt PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442
Ensembl chrNW_004955495:7,095,336...7,102,757
JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955527:57,335...185,727
Ensembl chrNW_004955527:57,335...185,727
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in ISO (PMID:11724934), (PMID:17872946)
(PMID:16168377), (PMID:24810856)
UniProt
ParkinsonsUK-UCL
PMID:11724934 PMID:16168377 PMID:17872946 PMID:24810856 NCBI chrNW_004955433:14,172,871...14,205,484
Ensembl chrNW_004955433:14,172,808...14,212,110
JBrowse link
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:21857022), (PMID:23223569) UniProt PMID:21857022 PMID:23223569 NCBI chrNW_004955424:11,259,288...11,262,413
Ensembl chrNW_004955424:11,259,432...11,262,269
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:23129660), (PMID:24981174)
(PMID:26565908)
UniProt PMID:23129660 PMID:24981174 PMID:26565908 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (PMID:23907667) ParkinsonsUK-UCL PMID:23907667 NCBI chrNW_004955476:10,911,515...10,951,544
Ensembl chrNW_004955476:10,911,515...10,929,183
JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in
acts_upstream_of_or_within
ISO (PMID:25009997) UniProt
MGI
PMID:25009997 NCBI chrNW_004955478:8,053,057...8,074,530
Ensembl chrNW_004955478:8,053,057...8,074,820
JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:18555783), (PMID:24089527), (PMID:25239945)
(PMID:15215856), (PMID:17872946)
ParkinsonsUK-UCL
UniProt
PMID:15215856 PMID:17872946 PMID:18555783 PMID:24089527 PMID:25239945 NCBI chrNW_004955540:1,918,230...1,944,186
Ensembl chrNW_004955540:1,917,655...1,944,214
JBrowse link
G Derl2 derlin 2 involved_in ISO (PMID:16449189) UniProt PMID:16449189 NCBI chrNW_004955467:10,824,922...10,837,408
Ensembl chrNW_004955467:10,825,341...10,837,328
JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:22607976) UniProt PMID:22607976 NCBI chrNW_004955455:8,415,868...8,418,753
Ensembl chrNW_004955455:8,415,839...8,421,762
JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO (PMID:21148293), (PMID:21150129) UniProt PMID:21148293 PMID:21150129 NCBI chrNW_004955437:19,266,206...19,285,654
Ensembl chrNW_004955437:19,266,206...19,288,854
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396
Ensembl chrNW_004955453:14,148,070...14,154,670
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISO (PMID:18400946)
(PMID:22267725)
UniProt PMID:18400946 PMID:22267725 NCBI chrNW_004955410:12,814,993...12,820,852
Ensembl chrNW_004955410:12,814,479...12,822,777
JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 involved_in ISO (PMID:18400946)
(PMID:18653895), (PMID:21329881)
UniProt PMID:18400946 PMID:18653895 PMID:21329881 NCBI chrNW_004955403:14,681,015...14,717,060
Ensembl chrNW_004955403:14,680,852...14,717,060
JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold involved_in ISO (PMID:15496406) UniProt PMID:15496406 NCBI chrNW_004955419:15,775,208...15,886,101
Ensembl chrNW_004955419:15,782,453...15,890,022
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:21062743), (PMID:25092655)
(PMID:11375934)
ParkinsonsUK-UCL
MGI
PMID:11375934 PMID:21062743 PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561
Ensembl chrNW_004955421:8,196,557...8,225,561
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:15537790), (PMID:25092655) ParkinsonsUK-UCL PMID:15537790 PMID:25092655 NCBI chrNW_004955422:26,243,034...26,271,849
Ensembl chrNW_004955422:26,242,986...26,273,297
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(PMID:16431915)
ARUK-UCL
ParkinsonsUK-UCL
PMID:16431915 PMID:25092655 NCBI chrNW_004955406:23,329,400...23,401,282
Ensembl chrNW_004955406:23,329,400...23,401,281
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:17707796) UniProt PMID:17707796 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:18502753) UniProt PMID:18502753 NCBI chrNW_004955441:19,535,425...19,557,960
Ensembl chrNW_004955441:19,535,425...19,557,458
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:19240031) UniProt PMID:19240031 NCBI chrNW_004955507:6,029,247...6,062,946
Ensembl chrNW_004955507:6,028,324...6,063,689
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:19240031) UniProt PMID:19240031 NCBI chrNW_004955463:13,445,468...13,460,370
Ensembl chrNW_004955463:13,444,722...13,463,132
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO (PMID:24215460) UniProt PMID:24215460 NCBI chrNW_004955408:28,737,597...28,797,143
Ensembl chrNW_004955408:28,737,279...28,797,564
JBrowse link
G Fbxo2 F-box protein 2 acts_upstream_of_or_within ISO (PMID:15723043) MGI PMID:15723043 NCBI chrNW_004955486:2,212,001...2,217,260
Ensembl chrNW_004955486:2,212,001...2,218,017
JBrowse link
G Fbxo6 F-box protein 6 involved_in ISO (PMID:12939278)
(PMID:21062743)
UniProt
ParkinsonsUK-UCL
PMID:12939278 PMID:21062743 NCBI chrNW_004955486:2,197,296...2,205,947
Ensembl chrNW_004955486:2,197,467...2,201,256
JBrowse link
G Foxred2 FAD dependent oxidoreductase domain containing 2 involved_in ISO (PMID:19706418) UniProt PMID:19706418 NCBI chrNW_004955413:23,070,715...23,091,402
Ensembl chrNW_004955413:23,068,642...23,091,396
JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chrNW_004955460:8,620,913...8,634,778
Ensembl chrNW_004955460:8,620,209...8,634,778
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:28827405) UniProt PMID:28827405 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO (PMID:18264092) UniProt PMID:18264092 NCBI chrNW_004955405:38,629,691...38,645,202
Ensembl chrNW_004955405:38,629,691...38,645,202
JBrowse link
G Jkamp JNK1/MAPK8 associated membrane protein involved_in ISO (PMID:19269966) UniProt PMID:19269966 NCBI chrNW_004955466:13,205,424...13,225,573
Ensembl chrNW_004955466:13,205,424...13,225,573
JBrowse link
G Man1a1 mannosidase alpha class 1A member 1 involved_in ISO (PMID:27108681) UniProt PMID:27108681 NCBI chrNW_004955436:1,830,275...1,972,861
Ensembl chrNW_004955436:1,830,211...1,935,970
JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:18003979), (PMID:21062743)
(PMID:15294975)
ParkinsonsUK-UCL
MGI
PMID:15294975 PMID:18003979 PMID:21062743 NCBI chrNW_004955513:5,109,651...5,122,568
Ensembl chrNW_004955513:5,111,046...5,122,442
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO PMID:12847084
(PMID:12847084)
ComplexPortal PMID:12847084 RGD:10047330 NCBI chrNW_004955506:1,451,337...1,513,455
Ensembl chrNW_004955506:1,451,337...1,513,455
JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in ISO (PMID:18264092), (PMID:18417469), (PMID:19346256) UniProt PMID:18264092 PMID:18417469 PMID:19346256 NCBI chrNW_004955458:5,407,709...5,432,646
Ensembl chrNW_004955458:5,407,739...5,432,085
JBrowse link
G Rcn3 reticulocalbin 3 involved_in ISO (PMID:26252542) UniProt PMID:26252542 NCBI chrNW_004955559:1,309,621...1,319,925
Ensembl chrNW_004955559:1,309,621...1,319,925
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (PMID:22795130) UniProt PMID:22795130 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477
JBrowse link
G Rnf103 ring finger protein 103 involved_in ISO (PMID:18675248) UniProt PMID:18675248 NCBI chrNW_004955424:1,097,981...1,161,267
Ensembl chrNW_004955424:1,097,981...1,117,844
Ensembl chrNW_004955424:1,097,981...1,117,844
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955540:3,140,649...3,153,546
Ensembl chrNW_004955540:3,140,649...3,153,546
JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955455:5,351,530...5,394,615
Ensembl chrNW_004955455:5,351,488...5,395,026
JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:19269966), (PMID:24019521) UniProt PMID:19269966 PMID:24019521 NCBI chrNW_004955437:643,133...645,528
Ensembl chrNW_004955437:643,170...645,528
JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 acts_upstream_of_or_within ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chrNW_004955442:17,468,302...17,470,296
Ensembl chrNW_004955442:17,468,302...17,470,296
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in ISO (PMID:8945469) UniProt PMID:8945469 NCBI chrNW_004955419:26,414,891...26,423,260
Ensembl chrNW_004955419:26,410,911...26,423,718
JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase involved_in ISO (PMID:21454652), (PMID:26471130)
(PMID:25066055)
ParkinsonsUK-UCL
UniProt
PMID:21454652 PMID:25066055 PMID:26471130 NCBI chrNW_004955438:5,030,915...5,082,015
Ensembl chrNW_004955438:5,030,915...5,082,118
JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:15215856) UniProt PMID:15215856 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in ISO (PMID:22607976) UniProt PMID:22607976 NCBI chrNW_004955430:22,986,673...23,070,923
Ensembl chrNW_004955430:22,986,762...23,069,383
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:23990462) ParkinsonsUK-UCL PMID:23990462 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Syvn1 synoviolin 1 acts_upstream_of_or_within
involved_in
ISO (PMID:21245296)
(PMID:21454652)
(PMID:12459480), (PMID:14593114), (PMID:17059562), (PMID:22590560)
(PMID:22607976), (PMID:26471130), (PMID:28827405)
MGI
ParkinsonsUK-UCL
UniProt
PMID:12459480 PMID:14593114 PMID:17059562 PMID:21245296 PMID:21454652 More... NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850
JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955514:968,763...972,918
Ensembl chrNW_004955514:968,763...972,918
JBrowse link
G Tmem67 transmembrane protein 67 involved_in ISO (PMID:19815549) UniProt PMID:19815549 NCBI chrNW_004955417:10,097,488...10,137,959
Ensembl chrNW_004955417:10,097,472...10,138,644
JBrowse link
G Tmub1 transmembrane and ubiquitin like domain containing 1 involved_in ISO (PMID:21343306) UniProt PMID:21343306 NCBI chrNW_004955491:5,518,199...5,520,743
Ensembl chrNW_004955491:5,518,193...5,520,521
JBrowse link
G Tor1a torsin family 1 member A involved_in ISO (PMID:17200151) UniProt PMID:17200151 NCBI chrNW_004955513:30,655...36,299
Ensembl chrNW_004955513:30,655...36,360
JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:17314412) UniProt PMID:17314412 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:24810856) ParkinsonsUK-UCL PMID:24810856 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 involved_in
acts_upstream_of_or_within
ISO (PMID:22607976)
(PMID:11278356)
UniProt
MGI
PMID:11278356 PMID:22607976 NCBI chrNW_004955407:41,683,771...41,724,014
Ensembl chrNW_004955407:41,683,720...41,724,014
JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 acts_upstream_of_or_within
involved_in
ISO (PMID:21245296)
(PMID:24020373)
(PMID:22607976)
MGI
UniProt
PMID:21245296 PMID:22607976 PMID:24020373 NCBI chrNW_004955411:16,076,647...16,091,554
Ensembl chrNW_004955411:16,074,551...16,091,570
JBrowse link
G Ube2j2 ubiquitin conjugating enzyme E2 J2 involved_in ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955486:9,519,467...9,539,666
Ensembl chrNW_004955486:9,524,459...9,540,562
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:19822669) UniProt PMID:19822669 NCBI chrNW_004955432:3,575,034...3,617,029
Ensembl chrNW_004955432:3,575,272...3,616,691
JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:24215460) UniProt PMID:24215460 NCBI chrNW_004955475:3,260,209...3,263,586
Ensembl chrNW_004955475:3,260,503...3,262,380
JBrowse link
G Ubxn4 UBX domain protein 4 involved_in ISO (PMID:19822669) UniProt PMID:19822669 NCBI chrNW_004955440:3,106,055...3,143,214
Ensembl chrNW_004955440:3,106,057...3,141,323
JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:19275885) UniProt PMID:19275885 NCBI chrNW_004955495:4,456,182...4,465,954
Ensembl chrNW_004955495:4,456,308...4,466,254
JBrowse link
G Ubxn8 UBX domain protein 8 involved_in ISO (PMID:21949850) UniProt PMID:21949850 NCBI chrNW_004955463:7,189,822...7,213,083
Ensembl chrNW_004955463:7,190,390...7,217,254
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:24089527)
(PMID:12847084)
ParkinsonsUK-UCL
ComplexPortal
PMID:12847084 PMID:24089527 RGD:10047330 NCBI chrNW_004955442:18,548,545...18,568,989
Ensembl chrNW_004955442:18,548,545...18,569,366
JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (PMID:28437467) MGI PMID:28437467 NCBI chrNW_004955442:3,986,936...4,001,155
Ensembl chrNW_004955442:3,985,308...3,999,598
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:19465887) UniProt PMID:19465887 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:17872946), (PMID:24129571), (PMID:25088257)
(PMID:12847084)
(PMID:20104022), (PMID:22607976), (PMID:24089527), (PMID:26265139)
UniProt
ComplexPortal
PMID:12847084 PMID:17872946 PMID:20104022 PMID:22607976 PMID:24089527 More... RGD:10047330 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:20160352) ParkinsonsUK-UCL PMID:20160352 NCBI chrNW_004955514:3,902,508...3,924,281
Ensembl chrNW_004955514:3,902,454...3,924,610
JBrowse link
mannoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561
Ensembl chrNW_004955421:8,196,557...8,225,561
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955422:26,243,034...26,271,849
Ensembl chrNW_004955422:26,242,986...26,273,297
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(PMID:16431915)
ParkinsonsUK-UCL PMID:16431915 PMID:25092655 NCBI chrNW_004955406:23,329,400...23,401,282
Ensembl chrNW_004955406:23,329,400...23,401,281
JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 involved_in ISO (PMID:18003979)
(PMID:10521544)
ParkinsonsUK-UCL PMID:10521544 PMID:18003979 NCBI chrNW_004955513:5,109,651...5,122,568
Ensembl chrNW_004955513:5,111,046...5,122,442
JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Man1a1 mannosidase alpha class 1A member 1 involved_in ISO (PMID:27108681) UniProt PMID:27108681 NCBI chrNW_004955436:1,830,275...1,972,861
Ensembl chrNW_004955436:1,830,211...1,935,970
JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955422:29,365,722...29,408,788
Ensembl chrNW_004955422:29,362,724...29,408,840
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (PMID:22795130) ParkinsonsUK-UCL PMID:22795130 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477
JBrowse link
mitochondrial protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in ISO (PMID:26504172), (PMID:30683687), (PMID:34718584) UniProt PMID:26504172 PMID:30683687 PMID:34718584 NCBI chrNW_004955402:1,037,414...1,069,165
Ensembl chrNW_004955402:1,037,402...1,069,165
JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:38199007) UniProt PMID:38199007 NCBI chrNW_004955409:37,513,925...37,519,250
Ensembl chrNW_004955409:37,514,177...37,519,376
JBrowse link
G Tmem126a transmembrane protein 126A involved_in ISO (PMID:38199007) UniProt PMID:38199007 NCBI chrNW_004955414:7,214,408...7,224,499
Ensembl chrNW_004955414:7,216,286...7,224,475
JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isg15 ISG15 ubiquitin like modifier acts_upstream_of_or_within ISO (PMID:15485925) MGI PMID:15485925 NCBI chrNW_004955486:9,706,878...9,707,876
Ensembl chrNW_004955486:9,706,703...9,707,949
JBrowse link
G Uba7 ubiquitin like modifier activating enzyme 7 acts_upstream_of_or_within ISO (PMID:15485925) MGI PMID:15485925 NCBI chrNW_004955532:1,697,667...1,706,668
Ensembl chrNW_004955532:1,695,956...1,706,676
JBrowse link
G Ube2l6 ubiquitin conjugating enzyme E2 L6 acts_upstream_of_or_within ISO (PMID:15485925) MGI PMID:15485925 NCBI chrNW_004955511:2,522,850...2,528,926
Ensembl chrNW_004955511:2,522,850...2,528,926
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISO (PMID:18606867) UniProt PMID:18606867 NCBI chrNW_004955414:14,245,682...14,260,717
Ensembl chrNW_004955414:14,245,682...14,260,717
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Svip small VCP interacting protein involved_in ISO PMID:17000876
(PMID:17872946)
ParkinsonsUK-UCL
UniProt
PMID:17000876 PMID:17872946 RGD:10047192 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISO (PMID:26265139) UniProt PMID:26265139 NCBI chrNW_004955469:6,173,524...6,214,568
Ensembl chrNW_004955469:6,173,524...6,214,568
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077
JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004955407:17,429,299...17,572,138
Ensembl chrNW_004955407:17,429,299...17,575,262
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955484:1,991,020...2,004,925
Ensembl chrNW_004955484:1,991,020...2,004,925
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO PMID:17517623
(PMID:17517623)
ARUK-UCL PMID:17517623 RGD:13514081 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:25683716) MGI PMID:25683716 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO (PMID:29295817) UniProt PMID:29295817 NCBI chrNW_004955449:13,834,561...13,875,864
Ensembl chrNW_004955449:13,835,811...13,859,699
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:21874017) UniProt PMID:21874017 NCBI chrNW_004955475:7,576,629...8,019,132
Ensembl chrNW_004955475:7,581,675...8,018,139
JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:23185022) UniProt PMID:23185022 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004955433:14,813,688...14,843,446
Ensembl chrNW_004955433:14,813,688...14,843,223
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in ISO (PMID:10764772) UniProt PMID:10764772 NCBI chrNW_004955596:381,080...414,307
Ensembl chrNW_004955596:381,068...416,055
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:25088257) ParkinsonsUK-UCL PMID:25088257 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004955538:2,412,297...2,416,094
Ensembl chrNW_004955538:2,412,297...2,415,132
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:18678708) UniProt PMID:18678708 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Camlg calcium modulating ligand involved_in ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955408:29,968,962...29,977,896
Ensembl chrNW_004955408:29,968,934...29,979,794
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) UniProt PMID:23398316 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154
JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955433:15,677,788...15,718,894
Ensembl chrNW_004955433:15,674,116...15,718,894
JBrowse link
G Csnk2b casein kinase 2 beta involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955437:210,541...215,725
Ensembl chrNW_004955437:210,838...219,694
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) UniProt PMID:28263186 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H involved_in ISO (PMID:32269044) FlyBase PMID:32269044 NCBI chrNW_004955417:22,757,781...22,846,349
Ensembl chrNW_004955417:22,754,395...22,846,618
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO (PMID:15313915) UniProt PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in ISO (PMID:11546783) BHF-UCL PMID:11546783 NCBI chrNW_004955415:33,067,689...33,077,749
Ensembl chrNW_004955415:33,067,689...33,074,730
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of_or_within ISO (PMID:24960163) MGI PMID:24960163 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004955416:10,052,964...10,073,318
Ensembl chrNW_004955416:10,053,010...10,071,421
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO (PMID:23695157) MGI PMID:23695157 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:17592138) UniProt PMID:17592138 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) UniProt PMID:22522597 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Park7 Parkinsonism associated deglycase acts_upstream_of ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (PMID:21715333) MGI PMID:21715333 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570
JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in ISO (PMID:24492612) UniProt PMID:24492612 NCBI chrNW_004955461:7,391,175...7,465,012
Ensembl chrNW_004955461:7,391,175...7,465,012
JBrowse link
G Rgs19 regulator of G protein signaling 19 involved_in ISO (PMID:11546783) BHF-UCL PMID:11546783 NCBI chrNW_004955528:183,067...185,703
Ensembl chrNW_004955528:183,066...185,703
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:21804542) UniProt PMID:21804542 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209
JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) UniProt PMID:27060496 NCBI chrNW_004955421:15,728,778...15,803,150
Ensembl chrNW_004955421:15,728,580...15,803,150
JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO (PMID:17981124) MGI PMID:17981124 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:16611981) MGI PMID:16611981 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 acts_upstream_of_or_within ISO (PMID:22285184) MGI PMID:22285184 NCBI chrNW_004955420:24,594,057...24,729,108
Ensembl chrNW_004955420:24,593,830...24,729,108
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272
JBrowse link
G Tlk2 tousled like kinase 2 involved_in ISO (PMID:20016786) UniProt PMID:20016786 NCBI chrNW_004955478:9,100,863...9,229,448
Ensembl chrNW_004955478:9,100,863...9,231,281
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO (PMID:31537781) MGI PMID:31537781 NCBI chrNW_004955412:19,670,590...19,672,495 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:20351172) UniProt PMID:20351172 NCBI chrNW_004955599:526,792...529,825
Ensembl chrNW_004955599:526,966...529,735
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) UniProt PMID:23770237 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp26 ubiquitin specific peptidase 26 involved_in ISO (PMID:28839133) UniProt PMID:28839133 NCBI chrNW_004955473:1,903,865...1,957,747 JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO (PMID:34102342) UniProt PMID:34102342 NCBI chrNW_004955471:316,319...350,982
Ensembl chrNW_004955471:315,779...350,982
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26678539) UniProt PMID:26678539 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:33378666) UniProt PMID:33378666 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628
JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217
Ensembl chrNW_004955545:1,610,929...1,617,460
JBrowse link
G Epha4 EPH receptor A4 involved_in ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199
Ensembl chrNW_004955453:12,099,757...12,240,199
JBrowse link
G Ufsp2 UFM1 specific peptidase 2 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004955403:23,634,967...23,655,429
Ensembl chrNW_004955403:23,634,924...23,655,429
JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955467:10,824,922...10,837,408
Ensembl chrNW_004955467:10,825,341...10,837,328
JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955455:8,415,868...8,418,753
Ensembl chrNW_004955455:8,415,839...8,421,762
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955441:19,535,425...19,557,960
Ensembl chrNW_004955441:19,535,425...19,557,458
JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955458:5,407,709...5,432,646
Ensembl chrNW_004955458:5,407,739...5,432,085
JBrowse link
G Svip small VCP interacting protein involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955404:11,205,972...11,357,370
Ensembl chrNW_004955404:11,205,585...11,357,370
JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955407:41,683,771...41,724,014
Ensembl chrNW_004955407:41,683,720...41,724,014
JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955411:16,076,647...16,091,554
Ensembl chrNW_004955411:16,074,551...16,091,570
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (PMID:32558204) MGI PMID:32558204 NCBI chrNW_004955541:2,718,076...2,720,322
Ensembl chrNW_004955541:2,718,076...2,720,322
JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in ISO (PMID:28007894) UniProt PMID:28007894 NCBI chrNW_004955409:10,428,556...10,445,384
Ensembl chrNW_004955409:10,428,556...10,445,880
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (PMID:20100865) MGI PMID:20100865 NCBI chrNW_004955437:2,916,598...3,070,771
Ensembl chrNW_004955437:2,916,598...3,070,771
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Pdcl3 phosducin like 3 acts_upstream_of_or_within ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004955470:6,553,450...6,563,814 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) UniProt PMID:15195100 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (PMID:26070566) UniProt PMID:26070566 NCBI chrNW_004955435:10,816,787...10,818,047
Ensembl chrNW_004955435:10,816,831...10,817,961
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20208556) BHF-UCL PMID:20208556 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 involved_in ISO (PMID:20208556) BHF-UCL PMID:20208556 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861) UniProt PMID:30683861 NCBI chrNW_004955506:5,990,070...6,015,808 JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955452:3,626,609...3,630,911
Ensembl chrNW_004955452:3,626,609...3,633,209
JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004955451:13,892,880...13,898,079
Ensembl chrNW_004955451:13,892,880...13,898,079
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955423:1,748,809...1,758,622
Ensembl chrNW_004955423:1,748,809...1,758,622
JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004955487:3,793,168...3,798,007
Ensembl chrNW_004955487:3,792,870...3,798,153
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23129660) UniProt PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677
JBrowse link
G Svip small VCP interacting protein involved_in ISO PMID:17000876 ParkinsonsUK-UCL PMID:17000876 RGD:10047192 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077
JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955413:4,451,530...4,466,832
Ensembl chrNW_004955413:4,451,622...4,466,832
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:16601693) MGI PMID:16601693 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 acts_upstream_of_positive_effect ISO (PMID:34711951) UniProt PMID:34711951 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069
JBrowse link
G Cul3 cullin 3 involved_in ISO (PMID:27561354) UniProt PMID:27561354 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976
JBrowse link
G Klhl15 kelch like family member 15 involved_in ISO (PMID:27561354) UniProt PMID:27561354 NCBI chrNW_004955509:4,377,975...4,439,287
Ensembl chrNW_004955509:4,375,240...4,439,287
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:37478846), (PMID:37478862) UniProt PMID:37478846 PMID:37478862 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
JBrowse link
oxidation-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO (PMID:12198491) UniProt PMID:12198491 NCBI chrNW_004955495:3,712,173...3,729,556
Ensembl chrNW_004955495:3,712,199...3,731,301
JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168
Ensembl chrNW_004955580:428,644...459,168
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:22045699)
(PMID:18307982)
ParkinsonsUK-UCL
UniProt
PMID:18307982 PMID:22045699 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839
JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955455:5,351,530...5,394,615
Ensembl chrNW_004955455:5,351,488...5,395,026
JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955451:3,165,316...3,178,991
Ensembl chrNW_004955451:3,164,845...3,178,991
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) ParkinsonsUK-UCL PMID:23246001 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:26265139) UniProt PMID:26265139 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Tmem259 transmembrane protein 259 involved_in ISO (PMID:25977983) UniProt PMID:25977983 NCBI chrNW_004955495:6,856,609...6,859,948
Ensembl chrNW_004955495:6,852,278...6,859,351
JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chrNW_004955417:10,097,488...10,137,959
Ensembl chrNW_004955417:10,097,472...10,138,644
JBrowse link
G Tmx1 thioredoxin related transmembrane protein 1 involved_in ISO (PMID:29932915) UniProt PMID:29932915 NCBI chrNW_004955409:11,708,867...11,722,205
Ensembl chrNW_004955409:11,710,646...11,722,342
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004955432:3,575,034...3,617,029
Ensembl chrNW_004955432:3,575,272...3,616,691
JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:18307982) UniProt PMID:18307982 NCBI chrNW_004955475:3,260,209...3,263,586
Ensembl chrNW_004955475:3,260,503...3,262,380
JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955420:8,835,858...8,919,837
Ensembl chrNW_004955420:8,835,549...8,919,933
JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:19911006) MGI PMID:19911006 NCBI chrNW_004955514:3,902,508...3,924,281
Ensembl chrNW_004955514:3,902,454...3,924,610
JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 involved_in ISO (PMID:19228967) ARUK-UCL PMID:19228967 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:20080667) UniProt PMID:20080667 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) UniProt PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator acts_upstream_of_or_within ISO (PMID:19416853) MGI PMID:19416853 NCBI chrNW_004955418:1,108,805...1,116,338
Ensembl chrNW_004955418:1,109,092...1,115,997
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:23858059) ParkinsonsUK-UCL PMID:23858059 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24709664) UniProt PMID:24709664 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:22180649) BHF-UCL PMID:22180649 NCBI chrNW_004955407:33,734,969...33,736,609
Ensembl chrNW_004955407:33,735,148...33,735,513
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:16300740) UniProt PMID:16300740 NCBI chrNW_004955493:6,746,380...6,747,763
Ensembl chrNW_004955493:6,746,380...6,747,763
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:12359729 RGD:7245486 NCBI chrNW_004955495:5,871,418...5,874,200
Ensembl chrNW_004955495:5,871,418...5,874,200
JBrowse link
G Osbpl7 oxysterol binding protein like 7 involved_in ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955451:13,289,938...13,301,243
Ensembl chrNW_004955451:13,291,577...13,300,322
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:23858059) ParkinsonsUK-UCL PMID:23858059 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004955493:7,627,189...7,640,711
Ensembl chrNW_004955493:7,627,189...7,640,711
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in ISO (PMID:21603654) UniProt PMID:21603654 NCBI chrNW_004955405:25,607,134...25,646,050
Ensembl chrNW_004955405:25,606,414...25,646,050
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29518356) ARUK-UCL PMID:29518356 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23512198)
(PMID:15937334)
UniProt
MGI
PMID:15937334 PMID:23512198 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:23152632) MGI PMID:23152632 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO (PMID:17060449) MGI PMID:17060449 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (PMID:16601693) MGI PMID:16601693 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430
JBrowse link
G Bag2 BAG cochaperone 2 NOT|involved_in ISO (PMID:19228967) ARUK-UCL PMID:19228967 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO (PMID:22302990) MGI PMID:22302990 NCBI chrNW_004955428:18,682,072...18,724,560
Ensembl chrNW_004955428:18,681,856...18,724,560
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:25974097) UniProt PMID:25974097 NCBI chrNW_004955541:2,724,369...2,777,540
Ensembl chrNW_004955541:2,724,312...2,777,592
JBrowse link
G Chfr checkpoint with forkhead and ring finger domains acts_upstream_of_or_within ISO (PMID:22285184) MGI PMID:22285184 NCBI chrNW_004955482:233,485...267,064
Ensembl chrNW_004955482:233,486...267,064
JBrowse link
G Clu clusterin involved_in ISO (PMID:20068069) UniProt PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chrNW_004955406:15,662,546...15,859,306
Ensembl chrNW_004955406:15,662,546...15,859,306
JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (PMID:11955436)
(PMID:19364825)
ParkinsonsUK-UCL
FlyBase
PMID:11955436 PMID:19364825 NCBI chrNW_004955415:4,921,356...4,966,705
Ensembl chrNW_004955415:4,921,852...4,966,705
JBrowse link
G Csnk1d casein kinase 1 delta involved_in ISO (PMID:19414593) UniProt PMID:19414593 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330
JBrowse link
G Csnk1e casein kinase 1 epsilon involved_in ISO (PMID:19414593) UniProt PMID:19414593 NCBI chrNW_004955413:24,560,889...24,591,669
Ensembl chrNW_004955413:24,560,900...24,591,669
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in ISO (PMID:12805222) BHF-UCL PMID:12805222 NCBI chrNW_004955426:23,852,752...23,883,030 JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004955416:16,393,199...16,408,144
Ensembl chrNW_004955416:16,393,156...16,408,613
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396
Ensembl chrNW_004955453:14,148,070...14,154,670
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (PMID:19319192) MGI PMID:19319192 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250
JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in ISO (PMID:29153991) UniProt PMID:29153991 NCBI chrNW_004955455:14,099,888...14,204,889
Ensembl chrNW_004955455:14,100,636...14,204,792
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:25684205) UniProt PMID:25684205 NCBI chrNW_004955467:9,667,938...9,670,067
Ensembl chrNW_004955467:9,667,941...9,670,067
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ParkinsonsUK-UCL PMID:23707074 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit acts_upstream_of_or_within ISO (PMID:17189825) MGI PMID:17189825 NCBI chrNW_004955411:2,593,523...2,617,553
Ensembl chrNW_004955411:2,593,541...2,616,539
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:25897075) ARUK-UCL PMID:25897075 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within
ISO (PMID:25897075)
(PMID:22660580)
(PMID:19364825), (PMID:22660580)
ARUK-UCL
MGI
UniProt
PMID:19364825 PMID:22660580 PMID:25897075 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:37277838) UniProt PMID:37277838 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 involved_in ISO (PMID:16831871) BHF-UCL PMID:16831871 NCBI chrNW_004955567:948,040...960,621
Ensembl chrNW_004955567:947,798...960,678
JBrowse link
G Il33 interleukin 33 acts_upstream_of_or_within ISO (PMID:22660580) MGI PMID:22660580 NCBI chrNW_004955434:10,145,449...10,187,595
Ensembl chrNW_004955434:10,171,812...10,188,948
JBrowse link
G Klhl40 kelch like family member 40 involved_in ISO (PMID:25940086) UniProt PMID:25940086 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G LOC102027549 serotransferrin involved_in ISO (PMID:37277838) UniProt PMID:37277838 NCBI chrNW_004955501:4,801,710...4,832,025
Ensembl chrNW_004955501:4,801,885...4,831,910
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:20457918) BHF-UCL PMID:20457918 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (PMID:29153991) UniProt PMID:29153991 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (PMID:29153991) UniProt PMID:29153991 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955504:507,253...527,275
Ensembl chrNW_004955504:507,388...526,407
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:25818168), (PMID:27323397)
(PMID:21804542)
UniProt PMID:21804542 PMID:25818168 PMID:27323397 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130
JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in ISO (PMID:16707496) UniProt PMID:16707496 NCBI chrNW_004955491:5,709,791...5,737,620
Ensembl chrNW_004955491:5,709,791...5,739,079
JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in ISO (PMID:27588481) UniProt PMID:27588481 NCBI chrNW_004955434:4,250,105...4,251,508 JBrowse link
G Pias1 protein inhibitor of activated STAT 1 involved_in ISO (PMID:22406621) UniProt PMID:22406621 NCBI chrNW_004955450:7,896,741...7,991,045
Ensembl chrNW_004955450:7,896,741...7,991,027
JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:19473992) UniProt PMID:19473992 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Plk2 polo like kinase 2 ISO RGD PMID:18723513 RGD:7241135 NCBI chrNW_004955446:9,671,090...9,676,956
Ensembl chrNW_004955446:9,671,090...9,677,188
JBrowse link
G Plk3 polo like kinase 3 involved_in ISO (PMID:20889502) UniProt PMID:20889502 NCBI chrNW_004955464:13,419,562...13,424,104
Ensembl chrNW_004955464:13,419,562...13,424,104
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO (PMID:17030191) BHF-UCL PMID:17030191 NCBI chrNW_004955500:1,897,899...1,990,791
Ensembl chrNW_004955500:1,897,912...1,990,875
JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:20208556) BHF-UCL PMID:20208556 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 involved_in ISO (PMID:20208556) BHF-UCL PMID:20208556 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO (PMID:16023600) UniProt PMID:16023600 NCBI chrNW_004955490:7,825,202...7,832,347
Ensembl chrNW_004955490:7,825,251...7,833,772
JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19785988) UniProt PMID:19785988 NCBI chrNW_004955530:78,488...83,297
Ensembl chrNW_004955530:78,426...83,297
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:26296656) CAFA PMID:26296656 NCBI chrNW_004955415:31,991,478...31,997,277
Ensembl chrNW_004955415:31,991,479...32,000,250
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980
JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO (PMID:19483087) UniProt PMID:19483087 NCBI chrNW_004955474:1,463,817...1,475,677
Ensembl chrNW_004955474:1,463,817...1,475,690
JBrowse link
G Rnf180 ring finger protein 180 acts_upstream_of_or_within ISO (PMID:18363970), (PMID:23926250) MGI PMID:18363970 PMID:23926250 NCBI chrNW_004955446:4,544,128...4,733,295
Ensembl chrNW_004955446:4,543,974...4,733,569
JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in ISO (PMID:22128169) UniProt PMID:22128169 RGD:13673844 NCBI chrNW_004955415:8,024,984...8,148,970
Ensembl chrNW_004955415:8,042,380...8,147,564
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20203304) AgBase PMID:20203304 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:24681946) UniProt PMID:24681946 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27457971) CACAO PMID:27457971 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:15590694) UniProt PMID:15590694 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:11146632) HGNC-UCL PMID:11146632 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chrNW_004955457:12,538,974...12,565,803
Ensembl chrNW_004955457:12,538,480...12,565,803
JBrowse link
G Sumo2 small ubiquitin like modifier 2 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chrNW_004955553:2,045,277...2,066,023
Ensembl chrNW_004955553:2,045,415...2,065,863
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) BHF-UCL PMID:15053879 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724
JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (PMID:20410507) BHF-UCL PMID:20410507 NCBI chrNW_004955461:494,003...501,928
Ensembl chrNW_004955461:494,003...501,990
JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in ISO (PMID:20410507) BHF-UCL PMID:20410507 NCBI chrNW_004955487:6,889,571...6,915,068
Ensembl chrNW_004955487:6,890,246...6,915,135
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004955454:7,951,876...7,998,686
Ensembl chrNW_004955454:7,951,876...7,998,686
JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:19098288) UniProt PMID:19098288 NCBI chrNW_004955413:4,451,530...4,466,832
Ensembl chrNW_004955413:4,451,622...4,466,832
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:9452483) BHF-UCL PMID:9452483 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
G Zer1 zyg-11 related cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955570:1,138,477...1,153,246
Ensembl chrNW_004955570:1,138,477...1,152,198
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO (PMID:16973439) MGI PMID:16973439 NCBI chrNW_004955460:8,881,981...8,892,404
Ensembl chrNW_004955460:8,881,981...8,892,404
JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955464:6,354,510...6,404,668
Ensembl chrNW_004955464:6,354,510...6,405,041
JBrowse link
positive regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004955452:7,372,917...7,375,072
Ensembl chrNW_004955452:7,373,001...7,375,856
JBrowse link
G Ctsc cathepsin C involved_in ISO PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chrNW_004955414:5,062,355...5,092,631
Ensembl chrNW_004955414:5,062,355...5,092,154
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:21700325) ARUK-UCL PMID:21700325 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22949502) ARUK-UCL PMID:22949502 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444
JBrowse link
G Rgn regucalcin ISO RGD PMID:1513338 RGD:9590188 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910
JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004955411:22,548,139...22,577,287
Ensembl chrNW_004955411:22,548,219...22,580,903
JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168
Ensembl chrNW_004955580:428,644...459,168
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:24200403) ParkinsonsUK-UCL PMID:24200403 NCBI chrNW_004955421:8,196,631...8,225,561
Ensembl chrNW_004955421:8,196,557...8,225,561
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:24200403) ParkinsonsUK-UCL PMID:24200403 NCBI chrNW_004955422:26,243,034...26,271,849
Ensembl chrNW_004955422:26,242,986...26,273,297
JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO (PMID:29593216) MGI PMID:29593216 NCBI chrNW_004955464:8,847,401...10,195,184
Ensembl chrNW_004955464:8,880,455...10,193,907
JBrowse link
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009
JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
ISO PMID:10228155
(PMID:16601693)
BHF-UCL
MGI
PMID:10228155 PMID:16601693 RGD:8553327 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430
JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168
Ensembl chrNW_004955580:428,644...459,168
JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in ISO (PMID:23563313) UniProt PMID:23563313 NCBI chrNW_004955543:719,185...731,788
Ensembl chrNW_004955543:718,996...733,753
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073
JBrowse link
G Clu clusterin involved_in ISO (PMID:20068069) UniProt PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO (PMID:20880836) MGI PMID:20880836 NCBI chrNW_004955492:6,946,528...7,239,328
Ensembl chrNW_004955492:6,953,389...7,239,328
JBrowse link
G Egf epidermal growth factor involved_in ISO (PMID:20208556) BHF-UCL PMID:20208556 NCBI chrNW_004955496:325,954...401,430
Ensembl chrNW_004955496:328,075...401,569
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (PMID:19319192) MGI PMID:19319192 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:20208556)
(PMID:27238018)
BHF-UCL
UniProt
PMID:20208556 PMID:27238018 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:22045699) ParkinsonsUK-UCL PMID:22045699 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in ISO (PMID:29691401) UniProt PMID:29691401 NCBI chrNW_004955436:10,900,521...11,014,259
Ensembl chrNW_004955436:10,920,075...11,013,520
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:24638062)
(PMID:18619870)
ARUK-UCL PMID:18619870 PMID:24638062 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444
JBrowse link
G Magef1 MAGE family member F1 involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chrNW_004955420:22,797,581...22,799,301 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:21241890) BHF-UCL PMID:21241890 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:18206965) UniProt PMID:18206965 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:19880522) UniProt PMID:19880522 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:25239945) UniProt PMID:25239945 NCBI chrNW_004955540:3,140,649...3,153,546
Ensembl chrNW_004955540:3,140,649...3,153,546
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) ParkinsonsUK-UCL PMID:23246001 NCBI chrNW_004955495:5,025,038...5,051,810
Ensembl chrNW_004955495:5,031,229...5,052,389
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:21454619) CACAO PMID:21454619 NCBI chrNW_004955460:14,774,545...14,860,783
Ensembl chrNW_004955460:14,774,545...14,802,879
JBrowse link
G Sumo3 small ubiquitin like modifier 3 acts_upstream_of_or_within ISO (PMID:18644859) MGI PMID:18644859 NCBI chrNW_004955407:41,725,992...41,732,692
Ensembl chrNW_004955407:41,727,181...41,732,692
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in ISO (PMID:18762808) BHF-UCL PMID:18762808 NCBI chrNW_004955493:8,309,480...8,315,378
Ensembl chrNW_004955493:8,309,505...8,315,668
JBrowse link
G Traf7 TNF receptor associated factor 7 involved_in ISO (PMID:21518757) UniProt PMID:21518757 NCBI chrNW_004955442:15,092,955...15,112,842
Ensembl chrNW_004955442:15,092,955...15,112,840
JBrowse link
G Trim67 tripartite motif containing 67 acts_upstream_of_or_within ISO (PMID:22337885) MGI PMID:22337885 NCBI chrNW_004955492:7,538,492...7,578,257
Ensembl chrNW_004955492:7,543,916...7,578,886
JBrowse link
G Vcp valosin containing protein ISO RGD PMID:16103111 RGD:1599730 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
prenylated protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in ISO (PMID:10585463) BHF-UCL PMID:10585463 NCBI chrNW_004955424:14,854,755...14,865,920
Ensembl chrNW_004955424:14,855,106...14,865,840
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (PMID:11399759) MGI PMID:11399759 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609
JBrowse link
proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:25413698) MGI PMID:25413698 NCBI chrNW_004955541:2,921,230...3,033,612
Ensembl chrNW_004955541:2,919,631...2,961,445
JBrowse link
G Ate1 arginyltransferase 1 acts_upstream_of_or_within ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955477:126,626...281,898
Ensembl chrNW_004955477:126,626...281,898
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:26565908) UniProt PMID:26565908 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 acts_upstream_of_or_within ISO (PMID:25732823) MGI PMID:25732823 NCBI chrNW_004955419:8,529,213...8,704,113
Ensembl chrNW_004955419:8,529,177...8,704,113
JBrowse link
G Cul4b cullin 4B acts_upstream_of_or_within ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955572:1,308,491...1,365,147 JBrowse link
G Ddb1 damage specific DNA binding protein 1 acts_upstream_of_or_within ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Ddi1 DNA damage inducible 1 homolog 1 involved_in ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004955412:6,980,778...6,982,453
Ensembl chrNW_004955412:6,981,036...6,982,346
JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 involved_in ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004955527:2,498,211...2,534,768 JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in ISO (PMID:35793002) UniProt PMID:35793002 NCBI chrNW_004955511:3,758,631...3,782,560
Ensembl chrNW_004955511:3,758,628...3,782,560
JBrowse link
G Fbxo44 F-box protein 44 acts_upstream_of_or_within ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955486:2,204,470...2,210,604
Ensembl chrNW_004955486:2,204,470...2,210,604
JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:35733270) MGI PMID:35733270 NCBI chrNW_004955448:10,808,940...10,819,655 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial acts_upstream_of ISO (PMID:25683716) MGI PMID:25683716 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753
JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:15673284) ParkinsonsUK-UCL PMID:15673284 NCBI chrNW_004955426:228,807...278,888
Ensembl chrNW_004955426:228,788...278,888
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (PMID:18227153), (PMID:21874017) UniProt PMID:18227153 PMID:21874017 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 acts_upstream_of_or_within ISO (PMID:26797281) MGI PMID:26797281 NCBI chrNW_004955491:5,709,791...5,737,620
Ensembl chrNW_004955491:5,709,791...5,739,079
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15901672) UniProt PMID:15901672 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:14627652) MGI PMID:14627652 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19725078) BHF-UCL PMID:19725078 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO (PMID:17349974) UniProt PMID:17349974 NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
JBrowse link
G Psma8 proteasome 20S subunit alpha 8 involved_in ISO (PMID:31358751) UniProt PMID:31358751 NCBI chrNW_004955402:14,230,119...14,278,987
Ensembl chrNW_004955402:14,230,204...14,278,508
JBrowse link
G Rnf170 ring finger protein 170 acts_upstream_of_or_within ISO (PMID:31076723) MGI PMID:31076723 NCBI chrNW_004955457:13,093,914...13,148,800
Ensembl chrNW_004955457:13,096,483...13,147,637
JBrowse link
G Rnf41 ring finger protein 41 involved_in ISO (PMID:18541373) ParkinsonsUK-UCL PMID:18541373 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263
JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (PMID:20007709) MGI PMID:20007709 NCBI chrNW_004955402:53,847,859...53,876,245
Ensembl chrNW_004955402:53,852,510...53,876,245
JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:36359729) UniProt PMID:36359729 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:26565908) UniProt PMID:26565908 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:17981124) MGI PMID:17981124 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511
JBrowse link
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enc1 ectodermal-neural cortex 1 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004955425:26,017,684...26,029,262
Ensembl chrNW_004955425:26,017,684...26,029,262
JBrowse link
G Midn midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chrNW_004955495:6,651,331...6,661,846 JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944
JBrowse link
G Psme4 proteasome activator subunit 4 involved_in ISO (PMID:23706739) UniProt PMID:23706739 NCBI chrNW_004955441:19,586,567...19,663,335
Ensembl chrNW_004955441:19,588,597...19,663,334
JBrowse link
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 acts_upstream_of_or_within ISO (PMID:16461359) MGI PMID:16461359 NCBI chrNW_004955491:5,546,097...5,573,866
Ensembl chrNW_004955491:5,523,969...5,573,387
JBrowse link
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of ISO (PMID:15937334) MGI PMID:15937334 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:33854232), (PMID:33854235), (PMID:33854239) UniProt PMID:33854232 PMID:33854235 PMID:33854239 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452
JBrowse link
G Ankrd9 ankyrin repeat domain 9 involved_in ISO (PMID:30293565) UniProt PMID:30293565 NCBI chrNW_004955538:1,735,898...1,739,827 JBrowse link
G Appbp2 amyloid beta precursor protein binding protein 2 involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004955451:1,736,742...1,804,776
Ensembl chrNW_004955451:1,736,629...1,804,776
JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in ISO (PMID:31253590), (PMID:33268465) UniProt PMID:31253590 PMID:33268465 NCBI chrNW_004955532:933,749...1,008,619
Ensembl chrNW_004955532:933,749...1,008,619
JBrowse link
G Arrb1 arrestin beta 1 involved_in ISO (PMID:15878855) UniProt PMID:15878855 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:15878855) UniProt PMID:15878855 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Asb11 ankyrin repeat and SOCS box containing 11 involved_in ISO (PMID:31387940), (PMID:38574733) UniProt PMID:31387940 PMID:38574733 NCBI chrNW_004955519:2,875,287...2,896,122
Ensembl chrNW_004955519:2,875,212...2,896,191
JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in ISO (PMID:21119685)
(PMID:23632887), (PMID:29374072)
UniProt PMID:21119685 PMID:23632887 PMID:29374072 NCBI chrNW_004955438:16,005,570...16,041,668
Ensembl chrNW_004955438:16,005,570...16,042,115
JBrowse link
G Asb9 ankyrin repeat and SOCS box containing 9 involved_in ISO (PMID:25654263), (PMID:33268465) UniProt PMID:25654263 PMID:33268465 NCBI chrNW_004955519:2,902,802...2,941,358
Ensembl chrNW_004955519:2,902,802...2,941,433
JBrowse link
G Atxn3 ataxin 3 involved_in ISO (PMID:21855799) UniProt PMID:21855799 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009
JBrowse link
G Aurka aurora kinase A acts_upstream_of ISO (PMID:17060449) MGI PMID:17060449 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:26692333) UniProt PMID:26692333 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bfar bifunctional apoptosis regulator involved_in ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004955442:4,229,236...4,255,623
Ensembl chrNW_004955442:4,226,756...4,255,623
JBrowse link
G Birc2 baculoviral IAP repeat containing 2 involved_in ISO (PMID:11907583) UniProt PMID:11907583 NCBI chrNW_004955412:5,658,322...5,685,628
Ensembl chrNW_004955412:5,659,478...5,685,114
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISO (PMID:23395176) UniProt PMID:23395176 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) UniProt PMID:15917222 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Cd2ap CD2 associated protein ISO RGD PMID:15001553 RGD:1302417 NCBI chrNW_004955437:12,005,399...12,087,014
Ensembl chrNW_004955437:11,983,311...12,091,100
JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in ISO (PMID:10373550), (PMID:20347421) UniProt PMID:10373550 PMID:20347421 NCBI chrNW_004955495:7,170,419...7,178,093
Ensembl chrNW_004955495:7,170,419...7,178,093
JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:23395176) UniProt PMID:23395176 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004955406:15,662,546...15,859,306
Ensembl chrNW_004955406:15,662,546...15,859,306
JBrowse link
G Crbn cereblon involved_in ISO (PMID:20223979) UniProt PMID:20223979 NCBI chrNW_004955421:10,166,927...10,190,470
Ensembl chrNW_004955421:10,166,962...10,189,916
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Cul1 cullin 1 involved_in ISO (PMID:10644755), (PMID:15145941), (PMID:34480022) UniProt PMID:10644755 PMID:15145941 PMID:34480022 NCBI chrNW_004955491:4,165,400...4,212,483
Ensembl chrNW_004955491:4,165,561...4,212,054
JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within
ISO (PMID:25684205)
(PMID:15601839), (PMID:19261606), (PMID:19782033), (PMID:20389280), (PMID:23453970), (PMID:29769719)
(PMID:20811152)
UniProt
MGI
PMID:15601839 PMID:19261606 PMID:19782033 PMID:20389280 PMID:20811152 More... NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976
JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within
ISO (PMID:14739464)
(PMID:16467204)
UniProt
MGI
PMID:14739464 PMID:16467204 NCBI chrNW_004955404:583,261...617,914
Ensembl chrNW_004955404:583,261...617,914
JBrowse link
G Cul5 cullin 5 involved_in ISO (PMID:21980433), (PMID:22190037), (PMID:27910872), (PMID:31387940), (PMID:33268465), (PMID:34518685), (PMID:38418882), (PMID:38574733)
(PMID:17974915), (PMID:24210661)
UniProt PMID:17974915 PMID:21980433 PMID:22190037 PMID:24210661 PMID:27910872 More... NCBI chrNW_004955412:10,266,072...10,336,156
Ensembl chrNW_004955412:10,256,381...10,336,156
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:28242748), (PMID:34259627) UniProt PMID:28242748 PMID:34259627 NCBI chrNW_004955532:3,085,386...3,153,952
Ensembl chrNW_004955532:3,085,386...3,154,671
JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 involved_in ISO (PMID:30111536), (PMID:31492966) UniProt PMID:30111536 PMID:31492966 NCBI chrNW_004955417:27,545,128...27,567,829
Ensembl chrNW_004955417:27,544,242...27,569,715
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:14739464), (PMID:20223979)
(PMID:30111536), (PMID:31492966)
UniProt PMID:14739464 PMID:20223979 PMID:30111536 PMID:31492966 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO (PMID:17872950) UniProt PMID:17872950 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:26692333) UniProt PMID:26692333 NCBI chrNW_004955540:1,918,230...1,944,186
Ensembl chrNW_004955540:1,917,655...1,944,214
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:21625540) UniProt PMID:21625540 NCBI chrNW_004955453:14,147,286...14,154,396
Ensembl chrNW_004955453:14,148,070...14,154,670
JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in ISO (PMID:27692986) UniProt PMID:27692986 NCBI chrNW_004955511:3,758,631...3,782,560
Ensembl chrNW_004955511:3,758,628...3,782,560
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (PMID:16431915) MGI PMID:16431915 NCBI chrNW_004955406:23,329,400...23,401,282
Ensembl chrNW_004955406:23,329,400...23,401,281
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (PMID:24914213) MGI PMID:24914213 NCBI chrNW_004955436:14,925,452...14,982,357
Ensembl chrNW_004955436:14,926,123...14,983,180
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO (PMID:26692333) UniProt PMID:26692333 NCBI chrNW_004955408:28,737,597...28,797,143
Ensembl chrNW_004955408:28,737,279...28,797,564
JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Fbxl19 F-box and leucine rich repeat protein 19 acts_upstream_of_or_within
involved_in
ISO (PMID:22660580)
(PMID:23512198)
MGI
UniProt
PMID:22660580 PMID:23512198 NCBI chrNW_004955493:7,768,802...7,798,546
Ensembl chrNW_004955493:7,768,802...7,798,546
JBrowse link
G Fbxl22 F-box and leucine rich repeat protein 22 acts_upstream_of_or_within ISO (PMID:22972877) MGI PMID:22972877 NCBI chrNW_004955450:11,719,678...11,728,093 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (PMID:17462724) UniProt PMID:17462724 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Fbxo11 F-box protein 11 involved_in ISO (PMID:29059170)
(PMID:25827072)
UniProt PMID:25827072 PMID:29059170 NCBI chrNW_004955441:14,471,283...14,495,508
Ensembl chrNW_004955441:14,471,283...14,553,916
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of ISO (PMID:19319192) MGI PMID:19319192 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250
JBrowse link
G Fbxo45 F-box protein 45 involved_in ISO (PMID:19996097) UniProt PMID:19996097 NCBI chrNW_004955420:12,714,749...12,727,600
Ensembl chrNW_004955420:12,714,608...12,726,113
JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO (PMID:36646384) UniProt PMID:36646384 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909
JBrowse link
G Fbxo9 F-box protein 9 involved_in ISO (PMID:34480022) UniProt PMID:34480022 NCBI chrNW_004955411:2,960,517...2,993,787
Ensembl chrNW_004955411:2,961,160...2,995,097
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:10644755), (PMID:20347421) UniProt PMID:10644755 PMID:20347421 NCBI chrNW_004955408:24,703,477...24,834,522
Ensembl chrNW_004955408:24,687,493...24,834,345
JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in ISO (PMID:18381890) UniProt PMID:18381890 NCBI chrNW_004955513:4,993,161...4,996,922
Ensembl chrNW_004955513:4,993,161...4,996,921
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:25897075), (PMID:35395208)
(PMID:15103331)
ARUK-UCL
UniProt
PMID:15103331 PMID:25897075 PMID:35395208 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Fem1b fem-1 homolog B involved_in ISO (PMID:24076122) UniProt PMID:24076122 NCBI chrNW_004955450:7,834,487...7,847,334
Ensembl chrNW_004955450:7,834,487...7,847,334
JBrowse link
G Fem1c fem-1 homolog C involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004955408:35,291,791...35,315,628
Ensembl chrNW_004955408:35,291,685...35,316,330
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) MGI PMID:23707074 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:16543145) UniProt PMID:16543145 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351
JBrowse link
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 involved_in ISO (PMID:18194665) UniProt PMID:18194665 NCBI chrNW_004955464:13,230,534...13,238,953
Ensembl chrNW_004955464:13,230,534...13,238,953
JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:26692333) UniProt PMID:26692333 NCBI chrNW_004955533:1,304,675...1,489,041
Ensembl chrNW_004955533:1,304,675...1,489,041
JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (PMID:22009753)
(PMID:29378950)
ARUK-UCL
UniProt
PMID:22009753 PMID:29378950 NCBI chrNW_004955422:26,810,829...26,918,517
Ensembl chrNW_004955422:26,809,972...26,887,123
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) UniProt PMID:18397884 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Kbtbd7 kelch repeat and BTB domain containing 7 involved_in ISO (PMID:25684205) UniProt PMID:25684205 NCBI chrNW_004955518:4,979,207...4,984,721 JBrowse link
G Kcmf1 potassium channel modulatory factor 1 involved_in ISO (PMID:37891180), (PMID:38297121) UniProt PMID:37891180 PMID:38297121 NCBI chrNW_004955424:2,348,170...2,412,488
Ensembl chrNW_004955424:2,348,170...2,386,038
JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 involved_in ISO (PMID:19782033) UniProt PMID:19782033 NCBI chrNW_004955493:7,039,027...7,055,798
Ensembl chrNW_004955493:7,038,698...7,055,798
JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 involved_in ISO (PMID:25270598) UniProt PMID:25270598 NCBI chrNW_004955413:23,568,540...23,578,292
Ensembl chrNW_004955413:23,567,865...23,578,292
JBrowse link
G Keap1 kelch like ECH associated protein 1 involved_in ISO (PMID:15601839) UniProt PMID:15601839 NCBI chrNW_004955495:1,704,695...1,711,339
Ensembl chrNW_004955495:1,704,695...1,711,290
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) UniProt PMID:24854087 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
G Klhdc2 kelch domain containing 2 involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004955409:12,901,892...12,910,562
Ensembl chrNW_004955409:12,901,892...12,910,562
JBrowse link
G Klhdc3 kelch domain containing 3 involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004955437:8,989,671...8,995,845
Ensembl chrNW_004955437:8,989,671...8,995,845
JBrowse link
G Klhl20 kelch like family member 20 involved_in ISO (PMID:20389280) UniProt PMID:20389280 NCBI chrNW_004955406:13,891,589...13,938,964
Ensembl chrNW_004955406:13,891,571...13,938,964
JBrowse link
G Klhl22 kelch like family member 22 involved_in ISO (PMID:29769719)
(PMID:29769719), (PMID:33109719)
UniProt PMID:29769719 PMID:33109719 NCBI chrNW_004955442:19,010,971...19,051,300
Ensembl chrNW_004955442:19,009,155...19,051,393
JBrowse link
G Klhl3 kelch like family member 3 involved_in ISO (PMID:35093948) UniProt PMID:35093948 NCBI chrNW_004955408:32,596,497...32,719,967
Ensembl chrNW_004955408:32,596,497...32,721,059
JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of ISO (PMID:24960163) MGI PMID:24960163 NCBI chrNW_004955420:28,117,553...28,122,391
Ensembl chrNW_004955420:28,117,898...28,122,270
JBrowse link
G Klhl42 kelch like family member 42 involved_in ISO (PMID:19261606) UniProt PMID:19261606 NCBI chrNW_004955505:7,046,274...7,078,175
Ensembl chrNW_004955505:7,043,000...7,077,062
JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:24449766) UniProt PMID:24449766 NCBI chrNW_004955426:228,807...278,888
Ensembl chrNW_004955426:228,788...278,888
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:29681526) UniProt PMID:29681526 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of ISO (PMID:23695157) MGI PMID:23695157 NCBI chrNW_004955498:6,329,402...6,444,708
Ensembl chrNW_004955498:6,329,275...6,445,169
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:19386237) MGI PMID:19386237 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO (PMID:21463633) BHF-UCL PMID:21463633 NCBI chrNW_004955402:42,339,380...42,688,661
Ensembl chrNW_004955402:42,339,380...42,688,714
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:15983046) UniProt PMID:15983046 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944
JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15930137)
(PMID:24914213)
UniProt
MGI
PMID:15930137 PMID:24914213 NCBI chrNW_004955483:8,078,796...8,079,612 JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004955543:452,172...484,564
Ensembl chrNW_004955543:452,121...484,560
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of ISO (PMID:21715333) MGI PMID:21715333 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:19881509) UniProt PMID:19881509 NCBI chrNW_004955458:747,770...773,885
Ensembl chrNW_004955458:750,226...773,483
JBrowse link
G Pcnp PEST proteolytic signal containing nuclear protein involved_in ISO (PMID:14741369) HGNC-UCL PMID:14741369 NCBI chrNW_004955427:3,142,340...3,162,172 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:29883609) UniProt PMID:29883609 NCBI chrNW_004955424:20,212,077...20,263,761
Ensembl chrNW_004955424:20,211,600...20,263,761
JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in ISO (PMID:33934390) UniProt PMID:33934390 NCBI chrNW_004955418:5,429,038...5,493,393
Ensembl chrNW_004955418:5,450,908...5,490,926
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22406621) UniProt PMID:22406621 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:15748170) MGI PMID:15748170 NCBI chrNW_004955467:2,422,181...2,456,925
Ensembl chrNW_004955467:2,423,659...2,457,307
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of_or_within ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004955463:7,229,717...7,249,490
Ensembl chrNW_004955463:7,226,912...7,249,490
JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma acts_upstream_of_or_within ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004955538:1,233,511...1,363,956
Ensembl chrNW_004955538:1,276,083...1,361,639
JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004955455:6,921,420...6,930,453
Ensembl chrNW_004955455:6,921,052...6,930,537
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:11439185), (PMID:21376232) ParkinsonsUK-UCL PMID:11439185 PMID:21376232 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Psmb5 proteasome 20S subunit beta 5 acts_upstream_of_or_within ISO (PMID:15198663) MGI PMID:15198663 NCBI chrNW_004955409:37,269,319...37,278,957
Ensembl chrNW_004955409:37,268,980...37,279,937
JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in ISO (PMID:12110588) UniProt PMID:12110588 NCBI chrNW_004955478:7,996,902...8,002,183
Ensembl chrNW_004955478:7,996,902...8,002,183
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in ISO (PMID:17449468) UniProt PMID:17449468 NCBI chrNW_004955597:272,352...289,348
Ensembl chrNW_004955597:271,897...289,348
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:10230407), (PMID:15601839), (PMID:20389280), (PMID:23453970), (PMID:29769719), (PMID:34480022) UniProt PMID:10230407 PMID:15601839 PMID:20389280 PMID:23453970 PMID:29769719 More... NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980
JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in ISO (PMID:18382127), (PMID:22609986) UniProt PMID:18382127 PMID:22609986 NCBI chrNW_004955481:9,718,369...9,788,048
Ensembl chrNW_004955481:9,718,369...9,765,132
JBrowse link
G Rnf122 ring finger protein 122 involved_in ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955463:9,684,546...9,699,939
Ensembl chrNW_004955463:9,684,068...9,699,939
JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) UniProt PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442
Ensembl chrNW_004955495:7,095,336...7,102,757
JBrowse link
G Rnf170 ring finger protein 170 acts_upstream_of_or_within ISO (PMID:31076723) MGI PMID:31076723 NCBI chrNW_004955457:13,093,914...13,148,800
Ensembl chrNW_004955457:13,096,483...13,147,637
JBrowse link
G Rnf186 ring finger protein 186 involved_in ISO (PMID:23896122) UniProt PMID:23896122 NCBI chrNW_004955452:433,413...450,261 JBrowse link
G Rnf187 ring finger protein 187 involved_in ISO (PMID:20852630) UniProt PMID:20852630 NCBI chrNW_004955581:74,876...82,915 JBrowse link
G Rnf216 ring finger protein 216 involved_in ISO (PMID:19893624) UniProt PMID:19893624 NCBI chrNW_004955460:10,423,736...10,578,421
Ensembl chrNW_004955460:10,425,885...10,551,295
JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO (PMID:15069192)
(PMID:22064484)
(PMID:22064484), (PMID:25012219)
UniProt PMID:15069192 PMID:22064484 PMID:25012219 NCBI chrNW_004955482:6,889,112...6,905,139
Ensembl chrNW_004955482:6,891,546...6,905,139
JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO (PMID:18408734), (PMID:20212317), (PMID:20943951) UniProt PMID:18408734 PMID:20212317 PMID:20943951 NCBI chrNW_004955514:1,501,943...1,525,689
Ensembl chrNW_004955514:1,511,062...1,523,714
JBrowse link
G Rnf7 ring finger protein 7 involved_in ISO (PMID:21980433), (PMID:22190037), (PMID:27910872), (PMID:31387940), (PMID:33268465), (PMID:34518685), (PMID:38574733)
(PMID:24210661)
UniProt PMID:21980433 PMID:22190037 PMID:24210661 PMID:27910872 PMID:31387940 More... NCBI chrNW_004955508:4,001,441...4,003,518 JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of ISO (PMID:17981124) MGI PMID:17981124 NCBI chrNW_004955500:6,924,445...6,978,482
Ensembl chrNW_004955500:6,926,548...6,979,230
JBrowse link
G Sh3bgrl SH3 domain binding glutamate rich protein like involved_in ISO (PMID:34331014) UniProt PMID:34331014 NCBI chrNW_004955529:1,159,704...1,223,222
Ensembl chrNW_004955529:1,159,625...1,223,222
JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in ISO (PMID:28546513)
(PMID:16615911)
(PMID:33591310)
UniProt PMID:16615911 PMID:28546513 PMID:33591310 NCBI chrNW_004955474:6,970,383...6,982,231
Ensembl chrNW_004955474:6,978,130...6,981,189
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:21841822) UniProt PMID:21841822 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:21841822) UniProt PMID:21841822 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Skp1 S-phase kinase associated protein 1 involved_in ISO (PMID:15145941), (PMID:34480022) UniProt PMID:15145941 PMID:34480022 NCBI chrNW_004955408:5,393,851...5,412,644
Ensembl chrNW_004955408:5,392,839...5,412,644
JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:27194766) UniProt PMID:27194766 NCBI chrNW_004955426:20,972,663...20,999,769
Ensembl chrNW_004955426:20,972,663...20,999,769
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:11278251) BHF-UCL PMID:11278251 NCBI chrNW_004955460:14,774,545...14,860,783
Ensembl chrNW_004955460:14,774,545...14,802,879
JBrowse link
G Socs2 suppressor of cytokine signaling 2 involved_in ISO (PMID:11781573), (PMID:21980433), (PMID:25505247), (PMID:34857742) UniProt PMID:11781573 PMID:21980433 PMID:25505247 PMID:34857742 NCBI chrNW_004955405:30,349,956...30,623,849
Ensembl chrNW_004955405:30,366,866...30,375,468
Ensembl chrNW_004955405:30,366,866...30,375,468
JBrowse link
G Socs7 suppressor of cytokine signaling 7 involved_in ISO (PMID:24210661) UniProt PMID:24210661 NCBI chrNW_004955451:13,567,377...13,595,685
Ensembl chrNW_004955451:13,567,377...13,595,685
JBrowse link
G Spop speckle type BTB/POZ protein involved_in
acts_upstream_of_or_within
ISO (PMID:22085717), (PMID:32109420)
(PMID:20811152)
UniProt
MGI
PMID:20811152 PMID:22085717 PMID:32109420 NCBI chrNW_004955451:11,897,642...11,970,269
Ensembl chrNW_004955451:11,897,592...11,970,269
JBrowse link
G Spopl speckle type BTB/POZ protein like involved_in ISO (PMID:22632832) UniProt PMID:22632832 NCBI chrNW_004955440:5,594,970...5,612,677
Ensembl chrNW_004955440:5,568,073...5,612,677
JBrowse link
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 involved_in ISO (PMID:29059170), (PMID:38418882) UniProt PMID:29059170 PMID:38418882 NCBI chrNW_004955442:15,486,845...15,493,422
Ensembl chrNW_004955442:15,487,475...15,493,422
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:29883609)
(PMID:15781469), (PMID:19713937), (PMID:24613385)
(PMID:21855799)
UniProt PMID:15781469 PMID:19713937 PMID:21855799 PMID:24613385 PMID:29883609 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Tbl1x transducin beta like 1 X-linked acts_upstream_of_or_within ISO (PMID:14980219) MGI PMID:14980219 NCBI chrNW_004955499:7,706,973...7,896,168
Ensembl chrNW_004955499:7,848,708...7,893,045
JBrowse link
G Tbl1xr1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (PMID:14980219) MGI PMID:14980219 NCBI chrNW_004955420:6,546,529...6,705,481
Ensembl chrNW_004955420:6,546,529...6,705,487
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:23616576) UniProt PMID:23616576 NCBI chrNW_004955451:13,315,237...13,317,888
Ensembl chrNW_004955451:13,315,859...13,325,937
JBrowse link
G Tnfaip1 TNF alpha induced protein 1 involved_in ISO (PMID:19782033) UniProt PMID:19782033 NCBI chrNW_004955481:4,786,015...4,799,376
Ensembl chrNW_004955481:4,786,015...4,799,274
JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in ISO (PMID:18077445) UniProt PMID:18077445 NCBI chrNW_004955472:3,073,090...3,076,607 JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:17314412), (PMID:21333377) UniProt PMID:17314412 PMID:21333377 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Trim26 tripartite motif containing 26 involved_in ISO (PMID:29203640) UniProt PMID:29203640 NCBI chrNW_004955583:303,081...325,560
Ensembl chrNW_004955583:303,081...325,560
JBrowse link
G Trim28 tripartite motif containing 28 involved_in ISO (PMID:36354136) FlyBase PMID:36354136 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
G Trim45 tripartite motif containing 45 involved_in ISO (PMID:36681779) UniProt PMID:36681779 NCBI chrNW_004955435:20,216,685...20,225,061
Ensembl chrNW_004955435:20,216,685...20,225,061
JBrowse link
G Trim63 tripartite motif containing 63 acts_upstream_of_or_within ISO (PMID:15601779) MGI PMID:15601779 NCBI chrNW_004955452:5,517,969...5,531,490
Ensembl chrNW_004955452:5,520,269...5,531,975
JBrowse link
G Trim72 tripartite motif containing 72 acts_upstream_of_or_within ISO (PMID:23965929) MGI PMID:23965929 NCBI chrNW_004955493:8,074,521...8,091,611
Ensembl chrNW_004955493:8,074,130...8,091,821
JBrowse link
G Trim9 tripartite motif containing 9 involved_in ISO (PMID:20085810) UniProt PMID:20085810 NCBI chrNW_004955409:11,837,717...11,946,718
Ensembl chrNW_004955409:11,837,273...11,946,718
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in ISO (PMID:10373550) UniProt PMID:10373550 NCBI chrNW_004955408:5,552,619...5,572,145
Ensembl chrNW_004955408:5,552,619...5,572,145
JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:27910872) UniProt PMID:27910872 NCBI chrNW_004955445:11,474,826...11,479,479
Ensembl chrNW_004955445:11,469,063...11,478,759
JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 involved_in ISO (PMID:35927303) UniProt PMID:35927303 NCBI chrNW_004955425:12,073,267...12,090,613
Ensembl chrNW_004955425:12,082,147...12,092,259
JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 involved_in
acts_upstream_of_or_within
ISO (PMID:20347421)
(PMID:15601779)
UniProt
MGI
PMID:15601779 PMID:20347421 NCBI chrNW_004955496:5,694,471...5,727,003
Ensembl chrNW_004955496:5,697,276...5,727,003
JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H acts_upstream_of_or_within ISO (PMID:23965929) MGI PMID:23965929 NCBI chrNW_004955479:10,535,851...10,650,252
Ensembl chrNW_004955479:10,535,470...10,650,252
JBrowse link
G Ube2i ubiquitin conjugating enzyme E2 I ISO RGD PMID:9013644 RGD:730030 NCBI chrNW_004955442:15,902,026...15,913,033
Ensembl chrNW_004955442:15,901,980...15,913,037
JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:35927303) UniProt PMID:35927303 NCBI chrNW_004955405:30,240,402...30,278,362
Ensembl chrNW_004955405:30,240,408...30,278,360
JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S involved_in ISO (PMID:27910872) UniProt PMID:27910872 NCBI chrNW_004955567:854,518...859,606
Ensembl chrNW_004955567:854,518...859,993
JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W involved_in ISO (PMID:35927303)
(PMID:21855799)
UniProt PMID:21855799 PMID:35927303 NCBI chrNW_004955444:6,454,043...6,536,719
Ensembl chrNW_004955444:6,454,049...6,509,505
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:30020076) UniProt PMID:30020076 NCBI chrNW_004955533:3,733,148...3,828,353
Ensembl chrNW_004955533:3,733,148...3,821,577
JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO (PMID:23509263) MGI PMID:23509263 NCBI chrNW_004955486:3,518,873...3,626,036
Ensembl chrNW_004955486:3,518,740...3,626,121
JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in ISO (PMID:15548684) UniProt PMID:15548684 NCBI chrNW_004955416:9,571,628...9,731,551
Ensembl chrNW_004955416:9,572,171...9,731,453
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:15548684) UniProt PMID:15548684 NCBI chrNW_004955437:8,678,212...8,780,700
Ensembl chrNW_004955437:8,677,801...8,782,120
JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:37891180), (PMID:38297121) UniProt PMID:37891180 PMID:38297121 NCBI chrNW_004955527:57,335...185,727
Ensembl chrNW_004955527:57,335...185,727
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29378950) UniProt PMID:29378950 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:21853124) UniProt PMID:21853124 NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:20104022)
(PMID:26692333)
(PMID:31387940)
UniProt PMID:20104022 PMID:26692333 PMID:31387940 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:34290272) UniProt PMID:34290272 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511
JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:19047365), (PMID:19561640) UniProt PMID:19047365 PMID:19561640 NCBI chrNW_004955417:4,011,302...4,064,584
Ensembl chrNW_004955417:4,000,966...4,061,908
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:19274063)
(PMID:19997087)
UniProt PMID:19274063 PMID:19997087 NCBI chrNW_004955484:6,853,820...6,967,261
Ensembl chrNW_004955484:6,851,307...6,967,261
JBrowse link
G Zfand2b zinc finger AN1-type containing 2B involved_in ISO (PMID:26692333) UniProt PMID:26692333 NCBI chrNW_004955453:14,222,423...14,225,681
Ensembl chrNW_004955453:14,221,002...14,225,681
JBrowse link
G Znrf1 zinc and ring finger 1 involved_in ISO (PMID:22057101) UniProt PMID:22057101 NCBI chrNW_004955484:2,468,392...2,566,539
Ensembl chrNW_004955484:2,468,392...2,566,539
JBrowse link
G Znrf4 zinc and ring finger 4 involved_in ISO (PMID:28656966) UniProt PMID:28656966 NCBI chrNW_004955495:3,854,178...3,855,556 JBrowse link
G Zswim8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:33184234) UniProt PMID:33184234 NCBI chrNW_004955437:18,099,416...18,113,936
Ensembl chrNW_004955437:18,099,589...18,114,726
JBrowse link
protein arginylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 acts_upstream_of_or_within ISO (PMID:16002466) MGI PMID:16002466 NCBI chrNW_004955477:126,626...281,898
Ensembl chrNW_004955477:126,626...281,898
JBrowse link
G Liat1 ligand of ATE1 involved_in ISO (PMID:25369936) UniProt PMID:25369936 NCBI chrNW_004955481:2,079,002...2,083,141 JBrowse link
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004955412:15,425,136...15,469,819
Ensembl chrNW_004955412:15,426,159...15,443,023
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:29626158) UniProt PMID:29626158 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO (PMID:18281465) BHF-UCL PMID:18281465 NCBI chrNW_004955477:2,864,737...2,922,069
Ensembl chrNW_004955477:2,873,170...2,922,069
JBrowse link
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 involved_in ISO (PMID:29632312), (PMID:30244831), (PMID:31011209), (PMID:32075755) UniProt PMID:29632312 PMID:30244831 PMID:31011209 PMID:32075755 NCBI chrNW_004955453:14,196,728...14,204,344
Ensembl chrNW_004955453:14,196,927...14,203,826
JBrowse link
G Atxn3 ataxin 3 involved_in ISO (PMID:21855799) UniProt PMID:21855799 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009
JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:14675537) BHF-UCL PMID:14675537 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
G Oma1 OMA1 zinc metallopeptidase involved_in ISO (PMID:20038677) UniProt PMID:20038677 NCBI chrNW_004955464:1,305,802...1,393,190
Ensembl chrNW_004955464:1,305,802...1,393,788
JBrowse link
G Saysd1 SAYSVFN motif domain containing 1 involved_in ISO (PMID:36848233) UniProt PMID:36848233 NCBI chrNW_004955437:4,369,140...4,375,405
Ensembl chrNW_004955437:4,369,141...4,375,968
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:16831871)
(PMID:21855799)
BHF-UCL
UniProt
PMID:16831871 PMID:21855799 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W involved_in ISO (PMID:21855799) UniProt PMID:21855799 NCBI chrNW_004955444:6,454,043...6,536,719
Ensembl chrNW_004955444:6,454,049...6,509,505
JBrowse link
G Yme1l1 YME1 like 1 ATPase involved_in ISO (PMID:22262461) UniProt PMID:22262461 NCBI chrNW_004955429:2,550,611...2,572,472
Ensembl chrNW_004955429:2,549,954...2,572,889
JBrowse link
G Zer1 zyg-11 related cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955570:1,138,477...1,153,246
Ensembl chrNW_004955570:1,138,477...1,152,198
JBrowse link
G Zswim8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:35989311) UniProt PMID:35989311 NCBI chrNW_004955437:18,099,416...18,113,936
Ensembl chrNW_004955437:18,099,589...18,114,726
JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955464:6,354,510...6,404,668
Ensembl chrNW_004955464:6,354,510...6,405,041
JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:15147274) ParkinsonsUK-UCL PMID:15147274 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (PMID:25088257) ParkinsonsUK-UCL PMID:25088257 NCBI chrNW_004955532:1,104,212...1,115,267
Ensembl chrNW_004955532:1,104,591...1,113,567
JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:28111074) UniProt PMID:28111074 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:19103752) MGI PMID:19103752 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004955402:6,809,126...7,105,356
Ensembl chrNW_004955402:6,451,864...7,105,411
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO (PMID:19423554) UniProt PMID:19423554 NCBI chrNW_004955409:498,450...523,067 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (PMID:27107699) MGI PMID:27107699 NCBI chrNW_004955436:14,925,452...14,982,357
Ensembl chrNW_004955436:14,926,123...14,983,180
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO (PMID:12751788) BHF-UCL PMID:12751788 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:27920251)
(PMID:29400713)
MGI PMID:27920251 PMID:29400713 NCBI chrNW_004955451:13,088,680...13,099,839
Ensembl chrNW_004955451:13,088,906...13,099,839
JBrowse link
G Nudt15 nudix hydrolase 15 involved_in ISO (PMID:19419956) UniProt PMID:19419956 NCBI chrNW_004955431:1,767,971...1,775,555
Ensembl chrNW_004955431:1,767,525...1,775,555
JBrowse link
G Pithd1 PITH domain containing 1 acts_upstream_of_or_within ISO (PMID:31915251) MGI PMID:31915251 NCBI chrNW_004955452:3,696,632...3,708,166
Ensembl chrNW_004955452:3,696,632...3,708,166
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:23001567) MGI PMID:23001567 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:17565987) UniProt PMID:17565987 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:18162577) UniProt PMID:18162577 NCBI chrNW_004955449:12,306,026...12,400,908 JBrowse link
G Psme3 proteasome activator subunit 3 involved_in ISO (PMID:18309296) UniProt PMID:18309296 NCBI chrNW_004955451:16,631,379...16,637,331
Ensembl chrNW_004955451:16,631,379...16,637,331
JBrowse link
G Rhbdf1 rhomboid 5 homolog 1 involved_in ISO (PMID:21439629) UniProt PMID:21439629 NCBI chrNW_004955442:17,090,962...17,098,068
Ensembl chrNW_004955442:17,078,864...17,098,999
JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in ISO (PMID:16792503) UniProt PMID:16792503 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:18162577) UniProt PMID:18162577 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:18162577) UniProt PMID:18162577 NCBI chrNW_004955402:9,710,080...9,737,601
Ensembl chrNW_004955402:9,710,080...9,743,077
JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf A-Raf proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22609986) UniProt PMID:22609986 NCBI chrNW_004955516:521,479...532,980
Ensembl chrNW_004955516:521,479...533,212
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:36822331) DisProt PMID:36822331 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in ISO (PMID:17183367) UniProt PMID:17183367 NCBI chrNW_004955424:21,962,837...22,067,745
Ensembl chrNW_004955424:21,927,079...22,050,371
JBrowse link
G Desi1 desumoylating isopeptidase 1 involved_in ISO (PMID:29666234) UniProt PMID:29666234 NCBI chrNW_004955413:27,115,130...27,135,625
Ensembl chrNW_004955413:27,112,974...27,135,625
JBrowse link
G Foxf2 forkhead box F2 involved_in ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004955465:11,740,374...11,744,619
Ensembl chrNW_004955465:11,740,323...11,744,619
JBrowse link
G Glmn glomulin, FKBP associated protein acts_upstream_of_or_within ISO (PMID:22405651) MGI PMID:22405651 NCBI chrNW_004955423:2,195,428...2,233,389
Ensembl chrNW_004955423:2,195,423...2,232,706
JBrowse link
G Gna12 G protein subunit alpha 12 involved_in ISO (PMID:22609986) UniProt PMID:22609986 NCBI chrNW_004955460:12,534,210...12,628,090
Ensembl chrNW_004955460:12,534,168...12,622,537
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:12643283) UniProt PMID:12643283 NCBI chrNW_004955415:31,991,478...31,997,277
Ensembl chrNW_004955415:31,991,479...32,000,250
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO (PMID:19435460) UniProt PMID:19435460 NCBI chrNW_004955419:19,428,415...19,473,181
Ensembl chrNW_004955419:19,429,970...19,460,796
JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K acts_upstream_of_or_within ISO (PMID:18710920) MGI PMID:18710920 NCBI chrNW_004955443:7,618,379...7,655,542
Ensembl chrNW_004955443:7,618,379...7,656,305
JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:15280365)
(PMID:27113755)
UniProt PMID:15280365 PMID:27113755 NCBI chrNW_004955545:2,218,794...2,236,665
Ensembl chrNW_004955545:2,220,548...2,236,646
JBrowse link
G Ufl1 UFM1 specific ligase 1 acts_upstream_of_or_within ISO (PMID:20228063) MGI PMID:20228063 NCBI chrNW_004955411:22,548,139...22,577,287
Ensembl chrNW_004955411:22,548,219...22,580,903
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:19056892) MGI PMID:19056892 NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
JBrowse link
G Xpo1 exportin 1 involved_in ISO (PMID:29666234) UniProt PMID:29666234 NCBI chrNW_004955424:22,370,006...22,420,568
Ensembl chrNW_004955424:22,370,006...22,420,568
JBrowse link
G Znf416 zinc finger protein 416 involved_in ISO PMID:33249983
(PMID:33249983)
UniProt PMID:33249983 RGD:329955556 NCBI chrNW_004955584:402,957...410,256 JBrowse link
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in ISO (PMID:30442713) UniProt PMID:30442713 NCBI chrNW_004955436:10,900,521...11,014,259
Ensembl chrNW_004955436:10,920,075...11,013,520
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in ISO (PMID:28068668) UniProt PMID:28068668 NCBI chrNW_004955439:11,559,655...11,611,287
Ensembl chrNW_004955439:11,559,657...11,611,660
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:19880522) UniProt PMID:19880522 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Tmem168 transmembrane protein 168 acts_upstream_of_or_within ISO (PMID:32175648) MGI PMID:32175648 NCBI chrNW_004955432:19,002,083...19,032,432 JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990) UniProt PMID:24728990 NCBI chrNW_004955533:3,733,148...3,828,353
Ensembl chrNW_004955533:3,733,148...3,821,577
JBrowse link
retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955424:11,259,288...11,262,413
Ensembl chrNW_004955424:11,259,432...11,262,269
JBrowse link
G Derl1 derlin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15215856)
(PMID:15215855)
(PMID:25660456)
UniProt
MGI
ParkinsonsUK-UCL
PMID:15215855 PMID:15215856 PMID:25660456 NCBI chrNW_004955540:1,918,230...1,944,186
Ensembl chrNW_004955540:1,917,655...1,944,214
JBrowse link
G Derl2 derlin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16449189)
(PMID:21220515)
UniProt
MGI
PMID:16449189 PMID:21220515 NCBI chrNW_004955467:10,824,922...10,837,408
Ensembl chrNW_004955467:10,825,341...10,837,328
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955408:28,737,597...28,797,143
Ensembl chrNW_004955408:28,737,279...28,797,564
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955433:14,609,275...14,621,774
Ensembl chrNW_004955433:14,608,375...14,621,839
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955405:38,629,691...38,645,202
Ensembl chrNW_004955405:38,629,691...38,645,202
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO (PMID:25660456)
(PMID:12847084)
ParkinsonsUK-UCL
ComplexPortal
PMID:12847084 PMID:25660456 RGD:10047330 NCBI chrNW_004955506:1,451,337...1,513,455
Ensembl chrNW_004955506:1,451,337...1,513,455
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in ISO (PMID:17215517) UniProt PMID:17215517 NCBI chrNW_004955419:26,414,891...26,423,260
Ensembl chrNW_004955419:26,410,911...26,423,718
JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955438:5,030,915...5,082,015
Ensembl chrNW_004955438:5,030,915...5,082,118
JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:15215856) UniProt PMID:15215856 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095
JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955422:20,067,933...20,074,947
Ensembl chrNW_004955422:20,068,848...20,073,850
JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955514:968,763...972,918
Ensembl chrNW_004955514:968,763...972,918
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:25660456)
(PMID:12847084)
ParkinsonsUK-UCL
ComplexPortal
PMID:12847084 PMID:25660456 RGD:10047330 NCBI chrNW_004955442:18,548,545...18,568,989
Ensembl chrNW_004955442:18,548,545...18,569,366
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:15215856)
(PMID:12847084)
(PMID:25660456)
UniProt
ComplexPortal
ParkinsonsUK-UCL
PMID:12847084 PMID:15215856 PMID:25660456 RGD:10047330 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
ribosome-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascc2 activating signal cointegrator 1 complex subunit 2 involved_in ISO (PMID:32099016) UniProt PMID:32099016 NCBI chrNW_004955455:4,032,357...4,077,900
Ensembl chrNW_004955455:4,032,194...4,077,953
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISO (PMID:32099016) UniProt PMID:32099016 NCBI chrNW_004955411:26,305,103...26,599,375
Ensembl chrNW_004955411:26,302,597...26,598,824
JBrowse link
G Ltn1 listerin E3 ubiquitin protein ligase 1 involved_in ISO (PMID:25578875) UniProt PMID:25578875 NCBI chrNW_004955407:28,303,598...28,352,797
Ensembl chrNW_004955407:28,301,636...28,352,797
JBrowse link
G Nemf nuclear export mediator factor involved_in ISO (PMID:25578875), (PMID:33406423), (PMID:33909987)
(PMID:33406423)
UniProt PMID:25578875 PMID:33406423 PMID:33909987 NCBI chrNW_004955409:12,855,655...12,901,673
Ensembl chrNW_004955409:12,855,749...12,900,702
JBrowse link
G Rnf10 ring finger protein 10 involved_in ISO (PMID:34348161), (PMID:34469731) UniProt PMID:34348161 PMID:34469731 NCBI chrNW_004955455:11,074,118...11,119,771
Ensembl chrNW_004955455:11,074,344...11,119,752
JBrowse link
G Trip4 thyroid hormone receptor interactor 4 involved_in ISO (PMID:32099016) UniProt PMID:32099016 NCBI chrNW_004955450:11,005,842...11,088,192
Ensembl chrNW_004955450:11,005,849...11,088,192
JBrowse link
G Znf598 zinc finger protein 598, E3 ubiquitin ligase involved_in ISO (PMID:32099016) UniProt PMID:32099016 NCBI chrNW_004955442:15,253,649...15,265,420
Ensembl chrNW_004955442:15,252,927...15,269,087
JBrowse link
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
ISO (PMID:22017875), (PMID:22017876), (PMID:22017877), (PMID:36608670)
(PMID:21911472)
(PMID:32558204)
UniProt
MGI
PMID:21911472 PMID:22017875 PMID:22017876 PMID:22017877 PMID:32558204 More... NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Ccnf cyclin F involved_in ISO (PMID:20596027), (PMID:25557911) UniProt PMID:20596027 PMID:25557911 NCBI chrNW_004955442:14,864,935...14,890,802
Ensembl chrNW_004955442:14,865,954...14,890,709
JBrowse link
G Cul1 cullin 1 involved_in ISO (PMID:11961546), (PMID:15103331), (PMID:22017875), (PMID:22017876), (PMID:36608670)
(PMID:12140560)
UniProt PMID:11961546 PMID:12140560 PMID:15103331 PMID:22017875 PMID:22017876 More... NCBI chrNW_004955491:4,165,400...4,212,483
Ensembl chrNW_004955491:4,165,561...4,212,054
JBrowse link
G Fbxl15 F-box and leucine rich repeat protein 15 involved_in ISO (PMID:21572392) UniProt PMID:21572392 NCBI chrNW_004955485:7,977,222...7,979,246
Ensembl chrNW_004955485:7,977,318...7,978,983
JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in ISO (PMID:24035498), (PMID:27234298) UniProt PMID:24035498 PMID:27234298 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:23604317), (PMID:26037928)
(PMID:23542741)
UniProt PMID:23542741 PMID:23604317 PMID:26037928 NCBI chrNW_004955421:512,197...617,524
Ensembl chrNW_004955421:512,158...617,524
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (PMID:17463251)
(PMID:23452855), (PMID:23452856)
UniProt PMID:17463251 PMID:23452855 PMID:23452856 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 involved_in ISO (PMID:17532294), (PMID:19762596), (PMID:19762597) UniProt PMID:17532294 PMID:19762596 PMID:19762597 NCBI chrNW_004955480:8,360,957...8,397,903
Ensembl chrNW_004955480:8,344,019...8,398,650
JBrowse link
G Fbxl7 F-box and leucine rich repeat protein 7 involved_in ISO (PMID:25778398)
(PMID:22306998), (PMID:25778398)
(PMID:28218735)
UniProt PMID:22306998 PMID:25778398 PMID:28218735 NCBI chrNW_004955426:4,659,787...5,044,074
Ensembl chrNW_004955426:4,659,968...5,041,475
JBrowse link
G Fbxo2 F-box protein 2 involved_in ISO (PMID:12140560) UniProt PMID:12140560 NCBI chrNW_004955486:2,212,001...2,217,260
Ensembl chrNW_004955486:2,212,001...2,218,017
JBrowse link
G Fbxo3 F-box protein 3 involved_in ISO (PMID:26037928)
(PMID:23542741)
UniProt PMID:23542741 PMID:26037928 NCBI chrNW_004955422:12,462,329...12,492,030
Ensembl chrNW_004955422:12,461,858...12,494,553
JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734
Ensembl chrNW_004955541:1,811,010...1,828,724
JBrowse link
G Fbxo38 F-box protein 38 involved_in ISO (PMID:30487606) UniProt PMID:30487606 NCBI chrNW_004955415:5,841,269...5,888,830
Ensembl chrNW_004955415:5,841,038...5,889,110
JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO (PMID:20159592), (PMID:29142209) UniProt PMID:20159592 PMID:29142209 NCBI chrNW_004955426:26,046,742...26,066,747
Ensembl chrNW_004955426:26,046,742...26,063,388
JBrowse link
G Fbxo6 F-box protein 6 involved_in ISO (PMID:19716789)
(PMID:12939278)
UniProt PMID:12939278 PMID:19716789 NCBI chrNW_004955486:2,197,296...2,205,947
Ensembl chrNW_004955486:2,197,467...2,201,256
JBrowse link
G Fbxo9 F-box protein 9 involved_in ISO (PMID:23263282) UniProt PMID:23263282 NCBI chrNW_004955411:2,960,517...2,993,787
Ensembl chrNW_004955411:2,961,160...2,995,097
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:20347421), (PMID:22017875), (PMID:22017876), (PMID:36608670)
(PMID:11896578)
UniProt PMID:11896578 PMID:20347421 PMID:22017875 PMID:22017876 PMID:36608670 NCBI chrNW_004955408:24,703,477...24,834,522
Ensembl chrNW_004955408:24,687,493...24,834,345
JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in ISO (PMID:21725316)
(PMID:23314863)
UniProt PMID:21725316 PMID:23314863 NCBI chrNW_004955513:4,993,161...4,996,922
Ensembl chrNW_004955513:4,993,161...4,996,921
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:15103331), (PMID:17434132)
(PMID:21953459)
(PMID:28007894)
UniProt PMID:15103331 PMID:17434132 PMID:21953459 PMID:28007894 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) UniProt PMID:24854087 NCBI chrNW_004955406:36,732,135...36,791,756
Ensembl chrNW_004955406:36,737,484...36,791,756
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:15103331), (PMID:22017875), (PMID:22017876), (PMID:36608670)
(PMID:12140560)
UniProt PMID:12140560 PMID:15103331 PMID:22017875 PMID:22017876 PMID:36608670 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980
JBrowse link
G Skp1 S-phase kinase associated protein 1 involved_in ISO (PMID:15103331), (PMID:20347421)
(PMID:12140560)
UniProt PMID:12140560 PMID:15103331 PMID:20347421 NCBI chrNW_004955408:5,393,851...5,412,644
Ensembl chrNW_004955408:5,392,839...5,412,644
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within ISO (PMID:17636028) MGI PMID:17636028 NCBI chrNW_004955448:745,419...868,313
Ensembl chrNW_004955448:745,419...868,602
JBrowse link
ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in ISO (PMID:16168377), (PMID:17043353) UniProt PMID:16168377 PMID:17043353 NCBI chrNW_004955433:14,172,871...14,205,484
Ensembl chrNW_004955433:14,172,808...14,212,110
JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in ISO (PMID:23479728) UniProt
CACAO
PMID:23479728 NCBI chrNW_004955523:818,535...874,189
Ensembl chrNW_004955523:818,535...874,189
JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:10431818) MGI PMID:10431818 NCBI chrNW_004955450:4,683,118...4,737,793
Ensembl chrNW_004955450:4,683,118...4,737,994
JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16118314)
(PMID:10431818)
UniProt
MGI
PMID:10431818 PMID:16118314 NCBI chrNW_004955532:933,749...1,008,619
Ensembl chrNW_004955532:933,749...1,008,619
JBrowse link
G Arrb1 arrestin beta 1 involved_in ISO (PMID:23886940) UniProt PMID:23886940 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Arrdc1 arrestin domain containing 1 NOT|involved_in ISO (PMID:27462458)
(PMID:23886940)
UniProt PMID:23886940 PMID:27462458 NCBI chrNW_004955513:5,479,468...5,486,489
Ensembl chrNW_004955513:5,479,468...5,490,990
JBrowse link
G Arrdc4 arrestin domain containing 4 NOT|involved_in ISO (PMID:27462458) UniProt PMID:27462458 NCBI chrNW_004955416:25,573,265...25,583,928
Ensembl chrNW_004955416:25,573,265...25,587,127
JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in ISO (PMID:24044920)
(PMID:26343497)
UniProt PMID:24044920 PMID:26343497 NCBI chrNW_004955438:16,005,570...16,041,668
Ensembl chrNW_004955438:16,005,570...16,042,115
JBrowse link
G Ate1 arginyltransferase 1 involved_in ISO (PMID:34893540)
(PMID:25369936), (PMID:34893540)
UniProt PMID:25369936 PMID:34893540 NCBI chrNW_004955477:126,626...281,898
Ensembl chrNW_004955477:126,626...281,898
JBrowse link
G Atxn3 ataxin 3 acts_upstream_of_or_within ISO (PMID:17764659) MGI PMID:17764659 NCBI chrNW_004955438:14,405,415...14,443,457
Ensembl chrNW_004955438:14,405,643...14,440,009
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:20676083)
(PMID:20713601)
ComplexPortal
UniProt
PMID:20676083 PMID:20713601 NCBI chrNW_004955437:176,848...188,243
Ensembl chrNW_004955437:176,797...188,003
JBrowse link
G Bfar bifunctional apoptosis regulator involved_in ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004955442:4,229,236...4,255,623
Ensembl chrNW_004955442:4,226,756...4,255,623
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15448698) UniProt PMID:15448698 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Cbl Cbl proto-oncogene involved_in ISO (PMID:25178484)
(PMID:23457600)
UniProt
MGI
PMID:23457600 PMID:25178484 NCBI chrNW_004955412:20,307,011...20,388,539
Ensembl chrNW_004955412:20,307,011...20,388,539
JBrowse link
G Cblc Cbl proto-oncogene C involved_in ISO (PMID:14661060) BHF-UCL PMID:14661060 NCBI chrNW_004955555:1,921,896...1,941,247
Ensembl chrNW_004955555:1,921,912...1,935,096
JBrowse link
G Chfr checkpoint with forkhead and ring finger domains involved_in
acts_upstream_of_or_within
ISO (PMID:19182791)
(PMID:15793587)
UniProt
MGI
PMID:15793587 PMID:19182791 NCBI chrNW_004955482:233,485...267,064
Ensembl chrNW_004955482:233,486...267,064
JBrowse link
G Cnot4 CCR4-NOT transcription complex subunit 4 involved_in ISO (PMID:26575292) UniProt PMID:26575292 NCBI chrNW_004955494:7,190,361...7,306,298
Ensembl chrNW_004955494:7,248,531...7,308,346
JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within
ISO (PMID:27561354)
(PMID:25401743)
UniProt
MGI
PMID:25401743 PMID:27561354 NCBI chrNW_004955453:9,546,554...9,629,976
Ensembl chrNW_004955453:9,564,522...9,629,976
JBrowse link
G Cul4a cullin 4A acts_upstream_of_or_within ISO (PMID:19481525) MGI PMID:19481525 NCBI chrNW_004955404:583,261...617,914
Ensembl chrNW_004955404:583,261...617,914
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:35197566) UniProt PMID:35197566 NCBI chrNW_004955572:1,308,491...1,365,147 JBrowse link
G Dcst1 DC-STAMP domain containing 1 involved_in ISO (PMID:27782195) UniProt PMID:27782195 NCBI chrNW_004955545:1,529,926...1,545,459
Ensembl chrNW_004955545:1,530,062...1,545,139
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:26431207)
(PMID:11673459)
UniProt PMID:11673459 PMID:26431207 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of ISO (PMID:20880836) MGI PMID:20880836 NCBI chrNW_004955492:6,946,528...7,239,328
Ensembl chrNW_004955492:6,953,389...7,239,328
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:18794347)
(PMID:26431207)
UniProt PMID:18794347 PMID:26431207 NCBI chrNW_004955406:5,256,057...5,299,573
Ensembl chrNW_004955406:5,254,558...5,299,573
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004955427:21,806,170...21,812,701
Ensembl chrNW_004955427:21,806,192...21,815,031
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561
Ensembl chrNW_004955421:8,196,557...8,225,561
JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:31628468) MGI PMID:31628468 NCBI chrNW_004955402:31,422,848...31,532,189
Ensembl chrNW_004955402:31,422,848...31,532,289
JBrowse link
G Fbxl12 F-box and leucine rich repeat protein 12 acts_upstream_of_or_within ISO (PMID:10531037) MGI PMID:10531037 NCBI chrNW_004955495:1,232,028...1,242,673
Ensembl chrNW_004955495:1,229,030...1,236,349
JBrowse link
G Fbxl14 F-box and leucine rich repeat protein 14 involved_in ISO (PMID:19955572) UniProt PMID:19955572 NCBI chrNW_004955454:4,133,718...4,137,363 JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 acts_upstream_of_or_within ISO (PMID:21343341) MGI PMID:21343341 NCBI chrNW_004955421:512,197...617,524
Ensembl chrNW_004955421:512,158...617,524
JBrowse link
G Fbxo10 F-box protein 10 involved_in ISO (PMID:23431138) UniProt PMID:23431138 NCBI chrNW_004955419:28,915,083...28,969,374
Ensembl chrNW_004955419:28,897,288...28,969,374
JBrowse link
G Fbxo2 F-box protein 2 acts_upstream_of_or_within ISO (PMID:15723043) MGI PMID:15723043 NCBI chrNW_004955486:2,212,001...2,217,260
Ensembl chrNW_004955486:2,212,001...2,218,017
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of ISO (PMID:19319192) MGI PMID:19319192 NCBI chrNW_004955450:1,152,383...1,171,257
Ensembl chrNW_004955450:1,152,383...1,171,250
JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO (PMID:16275645) UniProt PMID:16275645 NCBI chrNW_004955426:26,046,742...26,066,747
Ensembl chrNW_004955426:26,046,742...26,063,388
JBrowse link
G Fbxo45 F-box protein 45 involved_in ISO (PMID:19581926) UniProt PMID:19581926 NCBI chrNW_004955420:12,714,749...12,727,600
Ensembl chrNW_004955420:12,714,608...12,726,113
JBrowse link
G Fbxo6 F-box protein 6 involved_in ISO (PMID:21062743) ParkinsonsUK-UCL PMID:21062743 NCBI chrNW_004955486:2,197,296...2,205,947
Ensembl chrNW_004955486:2,197,467...2,201,256