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ONTOLOGY REPORT - ANNOTATIONS


Term:metal cluster binding
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Accession:GO:0051540 term browser browse the term
Definition:Binding to a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters.


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2 iron, 2 sulfur cluster binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm3 apoptosis inducing factor, mitochondria associated 3 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:87,364,452...87,380,705
Ensembl chr11:87,366,621...87,380,704
JBrowse link
G Aox1 aldehyde oxidase 1 enables ISS
ISO
IEA
GO_REF:0000024
(PMID:26322824), (PMID:26842593)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26322824 PMID:26842593 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:64,929,682...65,007,872
Ensembl chr 9:64,929,721...65,007,870
JBrowse link
G Aox2 aldehyde oxidase 2 enables ISS
IEA
GO_REF:0000024
GO_REF:0000043
UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr 9:65,175,455...65,265,149
Ensembl chr 9:65,177,511...65,265,149
JBrowse link
G Aox3 aldehyde oxidase 3 enables ISS
IEA
GO_REF:0000024
GO_REF:0000043
UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr 9:65,013,831...65,099,433
Ensembl chr 9:65,013,862...65,099,433
JBrowse link
G Aox4 aldehyde oxidase 4 enables IEA
ISS
GO_REF:0000043
GO_REF:0000024
UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr 9:65,110,330...65,167,188
Ensembl chr 9:65,110,325...65,167,192
JBrowse link
G Bola2 bolA family member 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:198,120,104...198,121,158
Ensembl chr 1:198,120,099...198,121,158
JBrowse link
G Ciapin1 cytokine induced apoptosis inhibitor 1 enables ISS
ISO
GO_REF:0000024
(PMID:27519415)
UniProt
RGD
PMID:27519415 GO_REF:0000024 NCBI chr19:10,596,923...10,612,414
Ensembl chr19:10,596,960...10,610,049
JBrowse link
G Cisd1 CDGSH iron sulfur domain 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:18,493,538...18,506,923
Ensembl chr20:18,493,538...18,506,912
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 enables IBA
ISO
PMID:21873635
(PMID:19580816)
RGD PMID:19580816, PMID:21873635 RGD:13792537 NCBI chr 2:240,586,754...240,611,560
Ensembl chr 2:240,586,754...240,611,560
JBrowse link
G Cisd3 CDGSH iron sulfur domain 3 enables ISO (PMID:29259115) RGD PMID:29259115 NCBI chr10:85,628,579...85,631,656
Ensembl chr10:85,628,491...85,631,657
JBrowse link
G Cmahp cytidine monophospho-N-acetylneuraminic acid hydroxylase, pseudogene enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:42,567,472...42,640,221
Ensembl chr17:42,583,945...42,640,221
JBrowse link
G Fdx1 ferredoxin 1 enables ISO
ISS
IEA
(PMID:21636783)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21636783 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:56,373,729...56,393,199
Ensembl chr 8:56,373,723...56,393,233
JBrowse link
G Fdx2 ferredoxin 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:22,086,534...22,091,450
Ensembl chr 8:22,086,534...22,091,450
JBrowse link
G Fech ferrochelatase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
G Fxn frataxin enables ISO
IEA
IBA
(PMID:12785837)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:12785837, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:242,123,975...242,152,834
Ensembl chr 1:242,123,975...242,152,834
JBrowse link
G Glrx2 glutaredoxin 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:60,529,057...60,552,115
Ensembl chr13:60,529,932...60,537,916
JBrowse link
G Isca1 iron-sulfur cluster assembly 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:5,281,727...5,294,386
Ensembl chr17:5,281,727...5,294,384
JBrowse link
G Isca2 iron-sulfur cluster assembly 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,488,678...108,490,188
Ensembl chr 6:108,488,678...108,490,188
JBrowse link
G Iscu iron-sulfur cluster assembly enzyme enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:48,621,454...48,627,297
Ensembl chr12:48,621,454...48,627,297
JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:69,919,863...69,953,182
Ensembl chr 9:69,919,867...69,953,182
JBrowse link
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:113,875,718...113,900,169
Ensembl chr 9:113,875,703...113,900,190
JBrowse link
G Rfesd Rieske (Fe-S) domain containing enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:2,758,382...2,784,366
Ensembl chr 2:2,769,400...2,779,109
JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B enables ISS
ISO
GO_REF:0000024
(PMID:15989954)
UniProt
RGD
PMID:15989954 GO_REF:0000024 NCBI chr 5:159,484,378...159,505,063
Ensembl chr 5:159,484,370...159,505,064
JBrowse link
G Uqcrfs1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:35,677,984...35,682,262
Ensembl chr17:35,677,984...35,682,259
JBrowse link
G Xdh xanthine dehydrogenase enables IDA
ISS
ISO
IEA
GO_REF:0000024
(PMID:17301077)
PMID:15878860
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17301077, PMID:2549869, PMID:15878860 GO_REF:0000024 GO_REF:0000107, RGD:13209004, RGD:8553512 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
3 iron, 4 sulfur cluster binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco1 aconitase 1 enables ISO
IBA
IEA
(PMID:1281544)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1281544, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218
JBrowse link
G Aco2 aconitase 2 IDA RGD PMID:14674759 RGD:2306852 NCBI chr 7:123,102,493...123,145,608
Ensembl chr 7:123,102,468...123,145,635
JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B enables ISS
ISO
GO_REF:0000024
(PMID:15989954)
UniProt
RGD
PMID:15989954 GO_REF:0000024 NCBI chr 5:159,484,378...159,505,063
Ensembl chr 5:159,484,370...159,505,064
JBrowse link
4 iron, 4 sulfur cluster binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco1 aconitase 1 enables IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:1281544), (PMID:16407072)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:1281544 PMID:16407072, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218
JBrowse link
G Aco2 aconitase 2 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:14674759, PMID:21873635 RGD:2306852, RGD:13792537 NCBI chr 7:123,102,493...123,145,608
Ensembl chr 7:123,102,468...123,145,635
JBrowse link
G Cdk5rap1 CDK5 regulatory subunit associated protein 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:149,835,953...149,870,429
Ensembl chr 3:149,703,848...149,870,413
JBrowse link
G Cdkal1 CDK5 regulatory subunit associated protein 1-like 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:36,451,031...37,157,882
Ensembl chr17:36,451,058...37,295,069
JBrowse link
G Ciao3 cytosolic iron-sulfur assembly component 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,143,732...15,152,706
Ensembl chr10:15,143,713...15,153,396
JBrowse link
G Ciapin1 cytokine induced apoptosis inhibitor 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:10,596,923...10,612,414
Ensembl chr19:10,596,960...10,610,049
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 enables IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104
G Dpyd dihydropyrimidine dehydrogenase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Elp3 elongator acetyltransferase complex subunit 3 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:48,942,866...49,005,074
Ensembl chr15:48,942,871...49,005,058
JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase enables ISO
IEA
(PMID:18037314)
GO_REF:0000104
RGD
UniProt
PMID:18037314 GO_REF:0000104 NCBI chr 2:178,367,547...178,389,641
Ensembl chr 2:178,367,549...178,389,608
JBrowse link
G Exo5 exonuclease 5 enables ISO (PMID:23095756)
(MGI:5487477|PMID:23095756)
RGD PMID:23095756 MGI:5487477 NCBI chr 5:139,849,930...139,853,247
Ensembl chr 5:139,849,930...139,853,247
JBrowse link
G Ireb2 iron responsive element binding protein 2 enables IEA
IBA
IDA
GO_REF:0000043
PMID:21873635
PMID:7665579
UniProt PMID:21873635, PMID:7665579 GO_REF:0000043, RGD:13792537, RGD:8554346 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Isca2 iron-sulfur cluster assembly 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,488,678...108,490,188
Ensembl chr 6:108,488,678...108,490,188
JBrowse link
G Lias lipoic acid synthetase enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:44,507,217...44,524,287
Ensembl chr14:44,507,218...44,524,252
JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 enables IEA
ISO
GO_REF:0000002
(PMID:15180982)
InterPro
RGD
PMID:15180982 GO_REF:0000002 NCBI chr 9:13,493,705...13,513,972
Ensembl chr 9:13,493,709...13,513,960
JBrowse link
G Mutyh mutY DNA glycosylase enables IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:69,919,863...69,953,182
Ensembl chr 9:69,919,867...69,953,182
JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:89,606,848...89,623,506
Ensembl chr13:89,606,840...89,619,398
JBrowse link
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:12,318,776...12,326,403
Ensembl chr 7:12,318,757...12,326,392
JBrowse link
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:219,141,289...219,144,610
Ensembl chr 1:219,141,292...219,144,610
JBrowse link
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:219,254,293...219,259,328
Ensembl chr 1:219,254,279...219,259,448
JBrowse link
G Nfu1 NFU1 iron-sulfur cluster scaffold enables ISO
IBA
(PMID:12886008), (PMID:28906594)
PMID:21873635
RGD PMID:12886008 PMID:28906594, PMID:21873635 RGD:13792537 NCBI chr 4:118,814,284...118,834,955
Ensembl chr 4:118,814,284...118,834,955
JBrowse link
G Nthl1 nth-like DNA glycosylase 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:13,996,660...14,002,827
Ensembl chr10:13,996,645...14,002,910
JBrowse link
G Nubp1 nucleotide binding protein 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:5,333,378...5,343,949
Ensembl chr10:5,333,378...5,344,121
JBrowse link
G Nubp2 nucleotide binding protein 2 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:14,244,201...14,247,930
Ensembl chr10:14,244,203...14,247,886
JBrowse link
G Nubpl nucleotide binding protein-like enables ISO
IBA
(PMID:19752196)
PMID:21873635
RGD PMID:19752196, PMID:21873635 RGD:13792537 NCBI chr 6:72,891,758...73,147,837
Ensembl chr 6:72,891,725...73,148,536
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link
G Prim2 DNA primase subunit 2 enables IEA
ISS
ISO
GO_REF:0000104
GO_REF:0000024
(PMID:25550159), (PMID:26975377)
UniProt
RGD
PMID:25550159 PMID:26975377 GO_REF:0000024 GO_REF:0000104 NCBI chr 9:38,535,435...38,745,058
Ensembl chr 9:38,536,920...38,745,099
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:44,803,664...44,961,362
Ensembl chr20:44,803,666...44,961,382
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 enables IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:20176015)
Ensembl
UniProt
RGD
PMID:20176015, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B enables ISO
ISS
(PMID:15989954)
GO_REF:0000024
RGD
UniProt
PMID:15989954 GO_REF:0000024 NCBI chr 5:159,484,378...159,505,063
Ensembl chr 5:159,484,370...159,505,064
JBrowse link
G Slc25a16 solute carrier family 25 member 16 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Tyw1 tRNA-yW synthesizing protein 1 homolog enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:29,824,990...29,919,240
Ensembl chr12:29,824,981...29,919,320
JBrowse link
iron-sulfur cluster binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aco1 aconitase 1 IDA RGD PMID:9092825 RGD:1642740 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218
JBrowse link
G Bola2 bolA family member 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,120,104...198,121,158
Ensembl chr 1:198,120,099...198,121,158
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase enables IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase enables IDA
ISO
(PMID:17050691), (PMID:4052375) RGD PMID:4052375 PMID:17050691, PMID:16248429 RGD:2301961 NCBI chr 2:178,367,547...178,389,641
Ensembl chr 2:178,367,549...178,389,608
JBrowse link
G Glrx3 glutaredoxin 3 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:209,768,696...209,799,912
Ensembl chr 1:209,768,696...209,799,903
JBrowse link
G Glrx5 glutaredoxin 5 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:128,750,503...128,760,880
Ensembl chr 6:128,750,795...128,760,880
JBrowse link
G Isca1 iron-sulfur cluster assembly 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:5,281,727...5,294,386
Ensembl chr17:5,281,727...5,294,384
JBrowse link
G Nfs1 NFS1 cysteine desulfurase enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:151,665,813...151,688,151
Ensembl chr 3:151,665,814...151,688,149
Ensembl chr 3:151,665,814...151,688,149
JBrowse link
G Nubp1 nucleotide binding protein 1 enables IBA
ISO
ISS
PMID:21873635
(PMID:18573874)
GO_REF:0000024
RGD
UniProt
PMID:18573874, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:5,333,378...5,343,949
Ensembl chr10:5,333,378...5,344,121
JBrowse link
G Nubp2 nucleotide binding protein 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,244,201...14,247,930
Ensembl chr10:14,244,203...14,247,886
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19986
    binding 17016
      metal cluster binding 62
        iron-sulfur cluster binding + 62
paths to the root