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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of intracellular pH
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Accession:GO:0051453 term browser browse the term
Definition:Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.
Synonyms:exact_synonym: cell pH regulation;   cellular pH regulation;   pH regulation in cell;   regulation of cell pH



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regulation of intracellular pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IEA
(PMID:17510399)
GO_REF:0000107
RGD
Ensembl
PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
JBrowse link
G Car2 carbonic anhydrase 2 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:4442131|PMID:20150244)
GO_REF:0000118
GO_REF:0000033
UniProt
RGD
TreeGrafter
GO_Central
PMID:20150244 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:4442131 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Car7 carbonic anhydrase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO
ISS
(PMID:15035633), (PMID:8901634)
GO_REF:0000024
RGD
UniProt
PMID:8901634 PMID:15035633 GO_REF:0000024 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in IMP
ISO
(MGI:6843609|PMID:24415791)
(PMID:20548053)
RGD PMID:20548053 PMID:24415791 PMID:24935944 MGI:6843609, RGD:14985214 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:15990874)
(MGI:4442131|PMID:20150244)
(PMID:20501439)
RGD PMID:15990874 PMID:20150244 PMID:20501439 MGI:4442131 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117
JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268
JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in IMP
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
RGD
PMID:16440368 GO_REF:0000033 GO_REF:0000118, RGD:9999231 NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
JBrowse link
G Slc4a3 solute carrier family 4 member 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(MGI:64573|PMID:2686841)
Ensembl
GO_Central
RGD
PMID:2686841 GO_REF:0000033 GO_REF:0000107 MGI:64573 NCBI chr 9:77,036,243...77,053,940
Ensembl chr 9:77,037,016...77,049,105
JBrowse link
G Slc4a4 solute carrier family 4 member 4 involved_in
acts_upstream_of
ISO
IBA
IEA
(PMID:24453308)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:5295108|PMID:21976511)
(MGI:5553185|PMID:24453308)
UniProtKB:Q9JK62 (PMID:10069984), (PMID:21976511)
RGD
GO_Central
TreeGrafter
Ensembl
PMID:10069984 PMID:21976511 PMID:24453308 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5295108 MGI:5553185 NCBI chr14:18,841,289...19,293,297
Ensembl chr14:18,845,159...19,272,883
JBrowse link
G Slc4a5 solute carrier family 4 member 5 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:115,710,101...115,810,330
Ensembl chr 4:115,725,592...115,810,323
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO
IBA
IEA
(MGI:3700901|PMID:16439691), (MGI:5506872|PMID:22586225), (MGI:5562523|PMID:23401617)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:16439691 PMID:22586225 PMID:23401617 GO_REF:0000033 GO_REF:0000118 MGI:3700901 MGI:5506872 MGI:5562523 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
IDA
(PMID:11133997), (PMID:18577713)
GO_REF:0000118
GO_REF:0000033
PMID:8189393
(MGI:5013899|PMID:21593314)
RGD
TreeGrafter
GO_Central
PMID:11133997 PMID:18577713 PMID:21593314 PMID:8189393 GO_REF:0000033 GO_REF:0000118 MGI:5013899, RGD:155230769 NCBI chr 7:131,861,284...131,939,295
Ensembl chr 7:131,864,102...131,931,051
JBrowse link
G Slc4a9 solute carrier family 4 member 9 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr18:28,128,740...28,144,554
Ensembl chr18:28,128,740...28,141,543
JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in IMP
IBA
ISS
ISO
GO_REF:0000033
GO_REF:0000024
(PMID:15035633), (PMID:24840010)
GO_Central
UniProt
RGD
PMID:15035633 PMID:24840010 PMID:22387884 GO_REF:0000024 GO_REF:0000033, RGD:6771326 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Slc9a2 solute carrier family 9 member A2 involved_in ISO
IEA
IBA
(MGI:7434531|PMID:34985202)
GO_REF:0000118
GO_REF:0000033
RGD
TreeGrafter
GO_Central
PMID:34985202 GO_REF:0000033 GO_REF:0000118 MGI:7434531 NCBI chr 9:42,932,001...43,014,447
Ensembl chr 9:42,931,346...43,014,444
JBrowse link
G Slc9a3 solute carrier family 9 member A3 involved_in ISO
IEA
IBA
(PMID:35613257)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
RGD
TreeGrafter
GO_Central
Ensembl
PMID:35613257 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417
JBrowse link
G Slc9a4 solute carrier family 9 member A4 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:42,825,334...42,879,729
Ensembl chr 9:42,825,064...42,879,422
JBrowse link
G Slc9a5 solute carrier family 9 member A5 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:24936055)
UniProt
GO_Central
RGD
PMID:24936055 GO_REF:0000024 GO_REF:0000033 NCBI chr19:33,225,481...33,246,913
Ensembl chr19:33,226,816...33,246,903
JBrowse link
G Slc9a6 solute carrier family 9 member A6 involved_in ISO
IBA
(PMID:28635961), (PMID:30296617)
GO_REF:0000033
(MGI:7387161|PMID:17005858)
RGD
GO_Central
PMID:17005858 PMID:28635961 PMID:30296617 GO_REF:0000033 MGI:7387161 NCBI chr  X:134,430,677...134,486,747
Ensembl chr  X:134,420,756...134,485,375
JBrowse link
G Slc9a8 solute carrier family 9 member A8 acts_upstream_of_or_within
involved_in
ISO
IBA
IDA
(MGI:3529663|PMID:15522866)
GO_REF:0000033
(MGI:6844626|PMID:29958869)
(PMID:34288721)
PMID:22088432
RGD
GO_Central
PMID:15522866 PMID:29958869 PMID:34288721 PMID:22088432 GO_REF:0000033 MGI:3529663 MGI:6844626, RGD:155663543 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471
JBrowse link
G Slc9a9 solute carrier family 9 member A9 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(MGI:7315838|PMID:35716776), (MGI:7387161|PMID:17005858)
(PMID:15522866), (PMID:24065030)
UniProt
GO_Central
RGD
PMID:15522866 PMID:17005858 PMID:24065030 PMID:35716776 GO_REF:0000024 GO_REF:0000033 MGI:7315838 MGI:7387161 NCBI chr 8:95,232,889...95,797,262
Ensembl chr 8:95,232,905...95,796,318
JBrowse link
G Slc9b1 solute carrier family 9 member B1 involved_in ISO (MGI:5883207|PMID:20036903) RGD PMID:20036903 MGI:5883207 NCBI chr 2:223,769,105...223,818,359
Ensembl chr 2:223,769,105...223,818,179
JBrowse link
G Slc9c1 solute carrier family 9 member C1 involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr11:55,211,774...55,278,285
Ensembl chr11:55,211,792...55,278,285
JBrowse link
G Slc9c2 solute carrier family 9, member C2 (putative) involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:73,424,683...73,524,244
Ensembl chr13:73,451,115...73,524,239
Ensembl chr13:73,451,115...73,524,239
JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISO
IEA
(PMID:19893578)
GO_REF:0000107
RGD
Ensembl
PMID:19893578 GO_REF:0000107 NCBI chr 3:141,627,128...141,675,386
Ensembl chr 3:141,627,346...141,675,386
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:16688778 RGD:1598619 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
endosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 acts_upstream_of_or_within ISO MGI:3528447 (MGI:3588799|PMID:16107722) RGD PMID:16107722 MGI:3588799 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725
JBrowse link
G Faslg Fas ligand IDA RGD PMID:18045865 RGD:2315735 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Rnasek ribonuclease K involved_in ISO UniProtKB:Q15904 (PMID:26212330) RGD PMID:26212330 NCBI chr10:54,954,904...54,956,622
Ensembl chr10:54,951,991...54,956,601
JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832
JBrowse link
intracellular pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5429843|PMID:21976599)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21976599 GO_REF:0000024 GO_REF:0000107 MGI:5429843 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO
IEA
(PMID:10615049)
GO_REF:0000107
RGD
Ensembl
PMID:10615049 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Slc26a3 solute carrier family 26 member 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5429843|PMID:21976599)
UniProt
RGD
PMID:21976599 GO_REF:0000024 MGI:5429843 NCBI chr 6:48,023,892...48,064,829
Ensembl chr 6:48,023,892...48,064,772
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (MGI:5429843|PMID:21976599) RGD PMID:21976599 MGI:5429843 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
intracellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr89b G protein-coupled receptor 89B involved_in ISO
IBA
(PMID:18794847)
GO_REF:0000033
RGD
GO_Central
PMID:18794847 GO_REF:0000033 NCBI chr 2:184,408,136...184,445,560
Ensembl chr 2:184,401,438...184,445,584
JBrowse link
G Slc12a5 solute carrier family 12 member 5 IDA RGD PMID:16420452 RGD:2303953 NCBI chr 3:153,696,517...153,735,801
Ensembl chr 3:153,696,517...153,735,765
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO (MGI:6296816|PMID:23908015) RGD PMID:23908015 MGI:6296816 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(MGI:6219928|PMID:27231233)
RGD PMID:27140606 PMID:27231233 MGI:6219928 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
G Ttpa alpha tocopherol transfer protein IDA RGD PMID:22147702 RGD:7247589 NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
JBrowse link
lysosomal lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO
IEA
ISS
(PMID:32276428)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32276428 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:10,183,983...10,210,948
Ensembl chr  X:10,183,068...10,210,918
JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IBA
(PMID:11722572)
GO_REF:0000033
RGD
GO_Central
PMID:11722572 GO_REF:0000033 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
JBrowse link
G Cln6 CLN6, transmembrane ER protein involved_in ISO (PMID:11722572) RGD PMID:11722572 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360
JBrowse link
G Creg1 cellular repressor of E1A-stimulated genes 1 acts_upstream_of_or_within ISO (MGI:6854654|PMID:33966596) RGD PMID:33966596 MGI:6854654 NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308
JBrowse link
G Grn granulin precursor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28073925)
UniProt
Ensembl
RGD
PMID:28073925 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:37390818)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:37390818 GO_REF:0000024 GO_REF:0000107 NCBI chr16:76,355,982...76,380,700
Ensembl chr16:76,355,984...76,381,883
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:37390818)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:37390818 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO
ISS
(PMID:11722572)
PMID:8895569
RGD PMID:11722572 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:4879078 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr 4:41,328,125...41,347,315
Ensembl chr 4:41,327,994...41,345,619
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
IEA
ISS
(PMID:28296633)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28296633 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108
JBrowse link
G Tmem9 transmembrane protein 9 involved_in ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:47,458,486...47,475,832
Ensembl chr13:47,458,498...47,475,832
JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:10924275) RGD PMID:10924275 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein involved_in ISO (PMID:25513726), (PMID:32966160) RGD PMID:25513726 PMID:32966160 NCBI chr 1:107,116,278...107,446,093
Ensembl chr 1:107,116,278...107,446,074
JBrowse link
G Slc45a2 solute carrier family 45, member 2 involved_in ISO (PMID:32966160)
(MGI:7338895|PMID:35469906)
RGD PMID:32966160 PMID:35469906 MGI:7338895 NCBI chr 2:59,963,599...59,996,408
Ensembl chr 2:59,963,706...59,996,317
JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(PMID:35333573), (PMID:35750034), (PMID:37390818)
UniProt
RGD
PMID:35333573 PMID:35750034 PMID:37390818 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819
JBrowse link
negative regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in ISO
IEA
(PMID:10506221)
GO_REF:0000107
RGD
Ensembl
PMID:10506221 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
phagosome acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab20 RAB20, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr16:78,019,337...78,043,529
Ensembl chr16:78,019,337...78,043,529
JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924
JBrowse link
G Rab39a RAB39A, member RAS oncogene family involved_in ISO (PMID:21255211) RGD PMID:21255211 NCBI chr 8:54,088,246...54,105,867
Ensembl chr 8:54,088,129...54,106,483
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
ISS
(PMID:21255211)
GO_REF:0000024
RGD
UniProt
PMID:21255211 GO_REF:0000024 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO MGI:5442794 (MGI:5442671|PMID:22593622) RGD PMID:22593622 MGI:5442671 NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
JBrowse link
G Slc4a7 solute carrier family 4 member 7 involved_in ISO (PMID:29779931) RGD PMID:29779931 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3852642 (MGI:3850356|PMID:19549681) RGD PMID:19549681 MGI:3850356 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
positive regulation of cellular pH reduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Avp arginine vasopressin IMP RGD PMID:17762181 RGD:2300343 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IMP RGD PMID:17762181 RGD:2300343 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Avpr1b arginine vasopressin receptor 1B IMP RGD PMID:17762181 RGD:2300343 NCBI chr13:43,046,531...43,059,046
Ensembl chr13:43,046,267...43,057,792
JBrowse link
G Car2 carbonic anhydrase 2 acts_upstream_of_or_within IMP
ISO
MGI:2135646 (MGI:5506965|PMID:23881097) RGD PMID:23881097 PMID:9665810 MGI:5506965, RGD:1342423 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Car7 carbonic anhydrase 7 acts_upstream_of_or_within ISO MGI:5543604 (MGI:5506965|PMID:23881097) RGD PMID:23881097 MGI:5506965 NCBI chr19:429,063...438,478
Ensembl chr19:429,075...438,467
JBrowse link
positive regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube3a ubiquitin protein ligase E3A involved_in IMP
ISO
PMID:23447592
(MGI:5486513|PMID:23447592)
RGD PMID:23447592 PMID:23447592 MGI:5486513, RGD:15023469 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
regulation of Golgi lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a7 solute carrier family 9 member A7 involved_in ISO (PMID:30335141) RGD PMID:30335141 NCBI chr  X:2,214,064...2,395,052
Ensembl chr  X:2,214,441...2,388,012
JBrowse link
G Slc9a8 solute carrier family 9 member A8 involved_in IEA
ISO
GO_REF:0000107
(PMID:15522866)
Ensembl
RGD
PMID:15522866 GO_REF:0000107 NCBI chr 3:156,147,855...156,198,497
Ensembl chr 3:156,148,104...156,198,471
JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC681325 hypothetical protein LOC681325 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:74,312,698...74,316,311
Ensembl chr  X:74,312,661...74,316,635
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:22012985) RGD PMID:22012985 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Spns1 SPNS lysolipid transporter 1, lysophospholipid acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:7345668|PMID:36161949)
GO_REF:0000107
RGD
Ensembl
PMID:36161949 GO_REF:0000107 MGI:7345668 NCBI chr 1:180,942,088...180,949,415
Ensembl chr 1:180,942,088...180,949,370
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in ISO
IBA
(PMID:31001245)
GO_REF:0000033
RGD
GO_Central
PMID:31001245 GO_REF:0000033 NCBI chr  X:50,403,962...50,423,141
Ensembl chr  X:50,361,248...50,423,269
JBrowse link
G Tmem165 transmembrane protein 165 involved_in ISO
ISS
(PMID:23569283)
GO_REF:0000024
RGD
UniProt
PMID:23569283 GO_REF:0000024 NCBI chr14:31,993,489...32,018,717
Ensembl chr14:31,993,493...32,018,717
JBrowse link
G Tmem175 transmembrane protein 175 involved_in ISS
ISO
GO_REF:0000024
(PMID:35750034)
(MGI:5693670|PMID:26317472)
UniProt
RGD
PMID:26317472 PMID:35750034 GO_REF:0000024 MGI:5693670 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes involved_in ISO
IEA
ISS
(PMID:28013294)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28013294 GO_REF:0000024 GO_REF:0000107 NCBI chr12:33,024,596...33,051,399
Ensembl chr12:33,024,650...33,051,393
JBrowse link
vacuolar acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
JBrowse link
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:31,947,220...31,979,875
Ensembl chr12:31,822,733...32,007,069
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:66,760,163...66,842,126
Ensembl chr 4:66,760,159...66,842,110
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:33,403,352...33,447,357
Ensembl chr19:33,403,355...33,447,450
JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:33,336,257...33,385,354
Ensembl chr 5:33,336,264...33,385,354
JBrowse link
G Atp6v0e1 ATPase H+ transporting V0 subunit e1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:16,479,656...16,502,732
Ensembl chr10:16,479,567...16,524,434
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in TAS
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
RGD
PMID:15013950 GO_REF:0000033 GO_REF:0000118, RGD:1304309 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745
JBrowse link
G Atp6v1d ATPase H+ transporting V1 subunit D involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:97,656,725...97,672,295
Ensembl chr 6:97,656,576...97,672,303
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,453,702...147,513,455
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Dmxl1 Dmx-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:42,993,292...43,163,457
Ensembl chr18:42,993,340...43,163,456
JBrowse link
G Dmxl2 Dmx-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161
JBrowse link
G Dnah10 dynein, axonemal, heavy chain 10 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:31,823,451...31,946,857
Ensembl chr12:31,822,733...32,007,069
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2446573 (MGI:3654884|PMID:11067873), (MGI:3690711|PMID:9670047), (MGI:3839054|PMID:18984740)
GO_REF:0000107
RGD
Ensembl
PMID:9670047 PMID:11067873 PMID:18984740 GO_REF:0000107 MGI:3654884 MGI:3690711 MGI:3839054 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
G Tctn2 tectonic family member 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:31,982,440...32,007,242
Ensembl chr12:31,822,733...32,007,069
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20295
    biological regulation 13636
      regulation of biological quality 3388
        regulation of intracellular pH 88
          intracellular pH elevation + 8
          intracellular pH reduction + 52
          regulation of cellular pH reduction + 9
          regulation of lysosomal lumen pH + 23
Path 2
Term Annotations click to browse term
  biological_process 20295
    homeostatic process 1973
      chemical homeostasis 1207
        monoatomic ion homeostasis 674
          monoatomic cation homeostasis 660
            regulation of pH 111
              regulation of cellular pH 97
                regulation of intracellular pH 88
                  intracellular pH elevation + 8
                  intracellular pH reduction + 52
                  regulation of cellular pH reduction + 9
                  regulation of lysosomal lumen pH + 23
paths to the root