ONTOLOGY REPORT - ANNOTATIONS
Term: neuron apoptotic process
Accession: GO:0051402
browse the term
Definition: Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
Synonyms: exact_synonym: apoptosis of neuronal cells; apoptosis of neurons; neuron programmed cell death by apoptosis; neuronal cell apoptosis; neuronal cell programmed cell death by apoptosis; programmed cell death of neuronal cells by apoptosis; programmed cell death of neurons by apoptosis; programmed cell death, neuronal cells; programmed cell death, neurons
narrow_synonym: neuron apoptosis
G
Aars1
alanyl-tRNA synthetase 1
acts_upstream_of
ISO
MGI:3618596 (MGI:3640843|PMID:16906134)
RGD
PMID:16906134
MGI:3640843
NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
G
Aatk
apoptosis-associated tyrosine kinase
acts_upstream_of_or_within
ISO
(MGI:1931899|PMID:11314040)
RGD
PMID:11314040
MGI:1931899
NCBI chr10:105,290,752...105,327,219
Ensembl chr10:105,291,585...105,327,112
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of
ISO
MGI:2176222|MGI:3525886 (MGI:4833709|PMID:20823226)
RGD
PMID:20823226
MGI:4833709
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Adnp
activity-dependent neuroprotector homeobox
acts_upstream_of
ISO
(MGI:1331215|PMID:10037502)
RGD
PMID:10037502
MGI:1331215
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
G
Agt
angiotensinogen
acts_upstream_of
ISO
MGI:2136636 (MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Agtr1a
angiotensin II receptor, type 1a
acts_upstream_of
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
G
Agtr1b
angiotensin II receptor, type 1b
acts_upstream_of
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232
G
Agtr2
angiotensin II receptor, type 2
acts_upstream_of
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057
G
Aifm1
apoptosis inducing factor, mitochondria associated 1
acts_upstream_of_or_within
ISO
MGI:1306796 (MGI:3577148|PMID:15703386)
RGD
PMID:15703386
MGI:3577148
NCBI chr X:127,650,223...127,689,356
Ensembl chr X:127,650,226...127,689,256
G
Angpt1
angiopoietin 1
acts_upstream_of involved_in
ISO IEA
MGI:98664 (MGI:3848848|PMID:19409199) GO_REF:0000107
RGD Ensembl
PMID:19409199
GO_REF:0000107 MGI:3848848
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
G
Apaf1
apoptotic peptidase activating factor 1
acts_upstream_of_or_within
ISO
MGI:1349414 (MGI:3577148|PMID:15703386)
RGD
PMID:15703386
MGI:3577148
NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540
G
App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19225519) GO_REF:0000107 MGI:1202717 (MGI:3617683|PMID:16478525)
RGD Ensembl
PMID:16478525 PMID:19225519
GO_REF:0000107 MGI:3617683
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1335098 (MGI:1932010|PMID:11248063) MGI:99702 (MGI:1352316|PMID:10639175)
RGD
PMID:10639175 PMID:11248063
MGI:1352316 MGI:1932010
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
G
Atn1
atrophin 1
involved_in
ISO IEA
(PMID:10085113) GO_REF:0000107
RGD Ensembl
PMID:10085113
GO_REF:0000107
NCBI chr 4:157,554,287...157,568,092
Ensembl chr 4:157,551,276...157,568,132
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of
ISO
MGI:1856098 (MGI:3689271|PMID:17003121)
RGD
PMID:17003121
MGI:3689271
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
G
Axl
Axl receptor tyrosine kinase
acts_upstream_of
ISO
MGI:104294 (MGI:3817816|PMID:18787040)
RGD
PMID:18787040
MGI:3817816
NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
G
Barhl1
BarH-like homeobox 1
acts_upstream_of
ISO
MGI:2181383 (MGI:2181080|PMID:12091321), (MGI:3708890|PMID:16752387)
RGD
PMID:12091321 PMID:16752387
MGI:2181080 MGI:3708890
NCBI chr 3:12,241,327...12,248,649
Ensembl chr 3:12,241,327...12,248,649
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of acts_upstream_of_or_within
ISO
MGI:107202|MGI:1857429|MGI:2158306|MGI:88139|MGI:95813 (MGI:1277631|PMID:9699561), (MGI:1352316|PMID:10639175), (MGI:1860799|PMID:10762311), (MGI:1861056|PMID:10884318), (MGI:1929535|PMID:11150333), (MGI:1933803|PMID:11146002), (MGI:3531599|PMID:15590937), (MGI:3586962|PMID:16103918), (MGI:3590457|PMID:15869495), (MGI:3691384|PMID:10683286), (MGI:3692043|PMID:14502238), (MGI:3694443|PMID:15947791), (MGI:3695831|PMID:17192424), (MGI:79659|PMID:8625820), (MGI:86927|PMID:9096145) MGI:1857429|MGI:88138|MGI:95819|MGI:97321|MGI:97383 (MGI:1344924|PMID:10479688), (MGI:1351384|PMID:10618441), (MGI:1860799|PMID:10762311), (MGI:1931634|PMID:11226327), (MGI:2153579|PMID:11717344), (MGI:2681362|PMID:14623868), (MGI:3527374|PMID:15574493), (MGI:3695621|PMID:17077143)
RGD
PMID:8625820 PMID:9096145 PMID:9699561 PMID:10479688 PMID:10618441 PMID:10639175 PMID:10683286 PMID:10762311 PMID:10884318 PMID:11146002 PMID:11150333 PMID:11226327 PMID:11717344 PMID:14502238 PMID:14623868 PMID:15574493 PMID:15590937 PMID:15869495 PMID:15947791 PMID:16103918 PMID:17077143 PMID:17192424 More...
MGI:1277631 MGI:1344924 MGI:1351384 MGI:1352316 MGI:1860799 MGI:1861056 MGI:1929535 MGI:1931634 MGI:1933803 MGI:2153579 MGI:2681362 MGI:3527374 MGI:3531599 MGI:3586962 MGI:3590457 MGI:3691384 MGI:3692043 MGI:3694443 MGI:3695621 MGI:3695831 MGI:79659 MGI:86927
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:1857134|MGI:99702 (MGI:1860799|PMID:10762311), (MGI:3702851|PMID:7546744) MGI:1857134|MGI:1857430|MGI:2156165|MGI:2158305 (MGI:1098920|PMID:9374413), (MGI:1336407|PMID:10321489), (MGI:1860799|PMID:10762311), (MGI:1891561|PMID:11027399), (MGI:3655321|PMID:9681465), (MGI:79659|PMID:8625820), (MGI:894621|PMID:9153592)
RGD
PMID:7546744 PMID:8625820 PMID:9153592 PMID:9374413 PMID:9681465 PMID:10321489 PMID:10762311 PMID:11027399 More...
MGI:1098920 MGI:1336407 MGI:1860799 MGI:1891561 MGI:3655321 MGI:3702851 MGI:79659 MGI:894621
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Bcl2l1
Bcl2-like 1
acts_upstream_of_or_within
ISO
MGI:107739|MGI:2158303 (MGI:1351384|PMID:10618441) MGI:1277950|MGI:2158303|MGI:99702 (MGI:1929535|PMID:11150333), (MGI:72933|PMID:7753802), (MGI:79659|PMID:8625820), (MGI:86927|PMID:9096145)
RGD
PMID:7753802 PMID:8625820 PMID:9096145 PMID:10618441 PMID:11150333
MGI:1351384 MGI:1929535 MGI:72933 MGI:79659 MGI:86927
NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of
ISO
MGI:1930038 (MGI:3590457|PMID:15869495), (MGI:80051|PMID:8861722)
RGD
PMID:8861722 PMID:15869495
MGI:3590457 MGI:80051
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Bnip3
BCL2 interacting protein 3
involved_in
IDA
PMID:14972662
UniProt
PMID:14972662
RGD:2314028
NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
G
Bok
BCL2 family apoptosis regulator BOK
acts_upstream_of_or_within
ISO
(MGI:1355646|PMID:9535847)
RGD
PMID:9535847
MGI:1355646
NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476
G
Cacna1a
calcium voltage-gated channel subunit alpha1 A
acts_upstream_of
ISO
MGI:1856209|MGI:1856210 (MGI:53718|PMID:4941467), (MGI:84024|PMID:8929530)
RGD
PMID:4941467 PMID:8929530
MGI:53718 MGI:84024
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
G
Casp3
caspase 3
acts_upstream_of_or_within
ISO
MGI:2158753|MGI:2651856|MGI:88139 (MGI:1344924|PMID:10479688), (MGI:1351384|PMID:10618441), (MGI:2150278|PMID:11549719), (MGI:3057092|PMID:15231831), (MGI:3626124|PMID:12427836)
RGD
PMID:10479688 PMID:10618441 PMID:11549719 PMID:12427836 PMID:15231831
MGI:1344924 MGI:1351384 MGI:2150278 MGI:3057092 MGI:3626124
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
G
Casp7
caspase 7
acts_upstream_of_or_within
ISO
(MGI:3057092|PMID:15231831)
RGD
PMID:15231831
MGI:3057092
NCBI chr 1:255,437,438...255,476,737
Ensembl chr 1:255,437,172...255,476,729
G
Casp9
caspase 9
acts_upstream_of
ISO
MGI:2158755|MGI:99702 (MGI:1929535|PMID:11150333), (MGI:3691523|PMID:11092819)
RGD
PMID:11092819 PMID:11150333
MGI:1929535 MGI:3691523
NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IMP IBA IEA ISO
GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:3720993|PMID:17591690)
GO_Central TreeGrafter Ensembl RGD
PMID:17591690 PMID:15592431
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3720993 , RGD:1598414
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cit
citron rho-interacting serine/threonine kinase
involved_in
ISO IEA
(PMID:27453578) GO_REF:0000107
RGD Ensembl
PMID:27453578
GO_REF:0000107
NCBI chr12:40,603,073...40,764,846
Ensembl chr12:40,605,563...40,763,860
G
Cln8
CLN8, transmembrane ER and ERGIC protein
acts_upstream_of
ISO
MGI:1856959 (MGI:3695117|PMID:15565184)
RGD
PMID:15565184
MGI:3695117
NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
(MGI:5050594|PMID:21459131)
RGD
PMID:21459131
MGI:5050594
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Col6a2
collagen type VI alpha 2 chain
acts_upstream_of_or_within
ISO
(MGI:5050594|PMID:21459131)
RGD
PMID:21459131
MGI:5050594
NCBI chr20:12,021,676...12,049,425
Ensembl chr20:12,021,767...12,057,564
G
Col6a3
collagen type VI alpha 3 chain
acts_upstream_of_or_within
ISO
(MGI:5050594|PMID:21459131)
RGD
PMID:21459131
MGI:5050594
NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471
G
Coro1a
coronin 1A
acts_upstream_of
ISO
MGI:97321 (MGI:5559799|PMID:24270184)
RGD
PMID:24270184
MGI:5559799
NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
G
Crh
corticotropin releasing hormone
IDA
cerebellar granule neurons
RGD
PMID:12941376
RGD:5508198
NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
G
Ctsb
cathepsin B
IMP
RGD
PMID:19420257
RGD:2315505
NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
G
Diablo
diablo, IAP-binding mitochondrial protein
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:2681362|PMID:14623868) GO_REF:0000033
RGD GO_Central
PMID:14623868
GO_REF:0000033 MGI:2681362
NCBI chr12:33,055,784...33,070,401
Ensembl chr12:33,055,263...33,070,387
G
Diablol1
diablo, IAP-binding mitochondrial protein like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:141,744,994...141,746,345
Ensembl chr 5:141,744,961...141,746,356
G
Dlx1
distal-less homeobox 1
acts_upstream_of involved_in
ISO IEA
MGI:1857826 (MGI:3604035|PMID:16007083) GO_REF:0000107
RGD Ensembl
PMID:16007083
GO_REF:0000107 MGI:3604035
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dnajc5
DnaJ heat shock protein family (Hsp40) member C5
acts_upstream_of
ISO
MGI:1277151|MGI:1889011 (MGI:3690829|PMID:16269331)
RGD
PMID:16269331
MGI:3690829
NCBI chr 3:168,621,905...168,656,570
Ensembl chr 3:168,621,969...168,655,935
G
Draxin
dorsal inhibitory axon guidance protein
acts_upstream_of
ISO
MGI:3833678 (MGI:4430162|PMID:19808066)
RGD
PMID:19808066
MGI:4430162
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079 (MGI:6391459|PMID:21935678)
RGD
PMID:21935678
MGI:6391459
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Epg5
ectopic P-granules 5 autophagy tethering factor
acts_upstream_of_or_within
ISO
MGI:5505596 (MGI:6453561|PMID:31628468)
RGD
PMID:31628468
MGI:6453561
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
G
Epha7
Eph receptor A7
acts_upstream_of involved_in
ISO IEA
(MGI:3582020|PMID:15902206) GO_REF:0000107
RGD Ensembl
PMID:15902206
GO_REF:0000107 MGI:3582020
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Erbb3
erb-b2 receptor tyrosine kinase 3
involved_in acts_upstream_of
ISO
(PMID:17701904) MGI:1929072|MGI:1929598 (MGI:1097830|PMID:9338783)
RGD
PMID:9338783 PMID:17701904
MGI:1097830
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Faim2
Fas apoptotic inhibitory molecule 2
acts_upstream_of
ISO
MGI:4888719 (MGI:4880811|PMID:21209208)
RGD
PMID:21209208
MGI:4880811
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
G
Fam162a
family with sequence similarity 162, member A
involved_in
ISO IBA IEA
(MGI:5319611|PMID:17316997), (MGI:5319617|PMID:15082785) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:15082785 PMID:17316997
GO_REF:0000033 GO_REF:0000118 MGI:5319611 MGI:5319617
NCBI chr11:64,680,978...64,709,865
Ensembl chr11:64,680,323...64,711,239
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (MGI:4829576|PMID:20530871)
RGD
PMID:20530871
MGI:4829576
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Fgf8
fibroblast growth factor 8
acts_upstream_of
ISO
MGI:95518 (MGI:3608165|PMID:16245339)
RGD
PMID:16245339
MGI:3608165
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of
ISO
MGI:2135676 (MGI:3529735|PMID:15708559)
RGD
PMID:15708559
MGI:3529735
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Gapdh
glyceraldehyde-3-phosphate dehydrogenase
involved_in
IMP
PMID:15951807
UniProt
PMID:15951807
RGD:8554488
NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
G
Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(MGI:3762988|PMID:17954912), (MGI:3795074|PMID:18346921)
RGD
PMID:17954912 PMID:18346921
MGI:3762988 MGI:3795074
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Gmppa
GDP-mannose pyrophosphorylase A
acts_upstream_of_or_within
ISO
(MGI:6709824|PMID:33755596)
RGD
PMID:33755596
MGI:6709824
NCBI chr 9:76,926,724...76,934,274
Ensembl chr 9:76,926,739...76,934,269
G
Gpx1
glutathione peroxidase 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2388705 (MGI:2150814|PMID:11579147) GO_REF:0000107
RGD Ensembl
PMID:11579147
GO_REF:0000107 MGI:2150814
NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
G
Grik2
glutamate ionotropic receptor kainate type subunit 2
involved_in acts_upstream_of
IMP ISO
PMID:11152698 MGI:95819 (MGI:1344923|PMID:10479699)
RGD
PMID:10479699 PMID:11152698
MGI:1344923 , RGD:8554109
NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
G
Gzmb
granzyme B
IDA
RGD
PMID:19895873
RGD:2325193
NCBI chr15:30,343,352...30,346,814
Ensembl chr15:30,173,603...30,346,814
G
H19
H19 imprinted maternally expressed transcript
IMP
RGD
PMID:35322553
RGD:242905190
NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
G
Hdac7
histone deacetylase 7
IEP
RGD
PMID:21118817
RGD:9681718
NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of involved_in
ISO IEA
MGI:2677899 (MGI:2676530|PMID:12972594) GO_REF:0000107
RGD Ensembl
PMID:12972594
GO_REF:0000107 MGI:2676530
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hipk2
homeodomain interacting protein kinase 2
acts_upstream_of
ISO
MGI:3487301 (MGI:3696537|PMID:17159989)
RGD
PMID:17159989
MGI:3696537
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
G
Hmgb1
high mobility group box 1
IMP
RGD
PMID:19944723
RGD:2316741
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Hras
HRas proto-oncogene, GTPase
acts_upstream_of
ISO
MGI:96680|MGI:97306 (MGI:1861510|PMID:10845775)
RGD
PMID:10845775
MGI:1861510
NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
G
Hspa4
heat shock protein family A (Hsp70) member 4
IMP
RGD
PMID:17473852
RGD:5688754
NCBI chr10:37,408,025...37,449,080
Ensembl chr10:37,408,025...37,449,001
G
Hspa5
heat shock protein family A (Hsp70) member 5
IEP
RGD
PMID:9058202
RGD:11354978
NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
G
Htra2
HtrA serine peptidase 2
IMP
mutant Htt-induced cell death
RGD
PMID:18662332
RGD:5688723
NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
G
Itsn1
intersectin 1
acts_upstream_of
ISO
(MGI:3768571|PMID:17875942)
RGD
PMID:17875942
MGI:3768571
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
G
Kcnq2
potassium voltage-gated channel subfamily Q member 2
acts_upstream_of_or_within
ISO
(MGI:5432049|PMID:20885443)
RGD
PMID:20885443
MGI:5432049
NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071
G
Kcnq3
potassium voltage-gated channel subfamily Q member 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5432049|PMID:20885443) GO_REF:0000107
RGD Ensembl
PMID:20885443
GO_REF:0000107 MGI:5432049
NCBI chr 7:97,730,219...98,025,652
Ensembl chr 7:97,730,465...98,025,653
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of
ISO
MGI:96224|MGI:97306 (MGI:1861510|PMID:10845775)
RGD
PMID:10845775
MGI:1861510
NCBI chr 4:178,185,418...178,218,484
G
Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:107202 (MGI:1932010|PMID:11248063) MGI:1857732|MGI:98834 (MGI:1860400|PMID:10911993), (MGI:1913213|PMID:9875844)
RGD
PMID:9875844 PMID:10911993 PMID:11248063
MGI:1860400 MGI:1913213 MGI:1932010
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
G
LOC120095320
protein FAM162A-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:36,389,447...36,391,357
Ensembl chr10:36,390,113...36,390,613
G
Map3k5
mitogen-activated protein kinase kinase kinase 5
involved_in
ISO
(MGI:5616327|PMID:12050113)
RGD
PMID:12050113
MGI:5616327
NCBI chr 1:14,685,776...14,904,935
Ensembl chr 1:14,685,492...14,904,800
G
Max
MYC associated factor X
IEP
RGD
PMID:14603520
RGD:2316820
NCBI chr 6:95,636,859...95,662,204
Ensembl chr 6:95,636,858...95,662,137
G
Mir124-1
microRNA 124-1
acts_upstream_of_or_within
ISO
MGI:3618700 (MGI:5303045|PMID:21857657)
RGD
PMID:21857657
MGI:5303045
NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
G
Mir124-2
microRNA 124-2
acts_upstream_of_or_within
ISO
MGI:2676807 (MGI:5303045|PMID:21857657)
RGD
PMID:21857657
MGI:5303045
NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
G
Mir29b1
microRNA 29b-1
IMP
RGD
PMID:35322553
RGD:242905190
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
G
Nae1
NEDD8 activating enzyme E1 subunit 1
involved_in
ISO IEA
(PMID:14557245) GO_REF:0000107
RGD Ensembl
PMID:14557245
GO_REF:0000107
NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
G
Ncstn
nicastrin
acts_upstream_of_or_within
ISO
MGI:3796837 (MGI:3848620|PMID:19494151)
RGD
PMID:19494151
MGI:3848620
NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
G
Ndp
norrin cystine knot growth factor NDP
acts_upstream_of_or_within
ISO
(MGI:6155267|PMID:29715368)
RGD
PMID:29715368
MGI:6155267
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
G
Ndufs4
NADH:ubiquinone oxidoreductase subunit S4
acts_upstream_of_or_within
ISO
MGI:3793713 (MGI:5636559|PMID:25652399)
RGD
PMID:25652399
MGI:5636559
NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846
G
Nes
nestin
acts_upstream_of
ISO
MGI:3844224 (MGI:4889157|PMID:20963821)
RGD
PMID:20963821
MGI:4889157
NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777
G
Nf1
neurofibromin 1
acts_upstream_of involved_in
ISO IEA
MGI:1857444|MGI:2176055|MGI:2176057|MGI:96224|MGI:96680 (MGI:1861510|PMID:10845775), (MGI:1932841|PMID:11297510), (MGI:1933752|PMID:7671302) GO_REF:0000107
RGD Ensembl
PMID:7671302 PMID:10845775 PMID:11297510
GO_REF:0000107 MGI:1861510 MGI:1932841 MGI:1933752
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nfatc4
nuclear factor of activated T-cells 4
acts_upstream_of
ISO
(MGI:3778102|PMID:18354019)
RGD
PMID:18354019
MGI:3778102
NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
G
Ngf
nerve growth factor
acts_upstream_of_or_within involved_in
ISO
(MGI:2681362|PMID:14623868) UniProtKB:P08138 (PMID:11927634) MGI:1345961|MGI:99702 (MGI:2153439|PMID:11731452), (MGI:5559799|PMID:24270184)
RGD
PMID:11731452 PMID:11927634 PMID:14623868 PMID:24270184
MGI:2153439 MGI:2681362 MGI:5559799
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Ngfr
nerve growth factor receptor
involved_in
ISO IEA
UniProtKB:P01138-PRO_0000019600 (PMID:11927634) GO_REF:0000107
RGD Ensembl
PMID:11927634
GO_REF:0000107
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nlrp1a
NLR family, pyrin domain containing 1A
involved_in
ISO
(PMID:15212762)
RGD
PMID:15212762
NCBI chr10:55,778,560...55,833,639
Ensembl chr10:55,778,560...55,825,180
G
Npr2
natriuretic peptide receptor 2
involved_in
ISO IEA
(MGI:6271658|PMID:29501420) GO_REF:0000107
RGD Ensembl
PMID:29501420
GO_REF:0000107 MGI:6271658
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
G
Nr4a2
nuclear receptor subfamily 4, group A, member 2
acts_upstream_of involved_in
ISO IEA
MGI:2157566 (MGI:1350702|PMID:10585298), (MGI:4462723|PMID:20566846) GO_REF:0000107
RGD Ensembl
PMID:10585298 PMID:20566846
GO_REF:0000107 MGI:1350702 MGI:4462723
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
acts_upstream_of
ISO
MGI:3037444 (MGI:3056852|PMID:15456880), (MGI:4462723|PMID:20566846)
RGD
PMID:15456880 PMID:20566846
MGI:3056852 MGI:4462723
NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
G
Ntf3
neurotrophin 3
acts_upstream_of
ISO
(MGI:4414741|PMID:19915564)
RGD
PMID:19915564
MGI:4414741
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Ntrk1
neurotrophic receptor tyrosine kinase 1
acts_upstream_of
ISO
MGI:99702 (MGI:2153439|PMID:11731452)
RGD
PMID:11731452
MGI:2153439
NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
G
Oxr1
oxidation resistance 1
involved_in acts_upstream_of acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4330699 (MGI:5296990|PMID:22028674) MGI:4461745 (MGI:5766554|PMID:26668325)
Ensembl RGD
PMID:22028674 PMID:26668325
GO_REF:0000107 MGI:5296990 MGI:5766554
NCBI chr 7:72,528,750...72,965,666
Ensembl chr 7:72,528,786...72,965,666
G
Pigt
phosphatidylinositol glycan anchor biosynthesis, class T
acts_upstream_of_or_within
ISO
(MGI:3621592|PMID:16516892)
RGD
PMID:16516892
MGI:3621592
NCBI chr 3:153,227,749...153,236,922
Ensembl chr 3:153,227,420...153,236,887
G
Polb
DNA polymerase beta
acts_upstream_of_or_within
ISO
MGI:98834 (MGI:3511396|PMID:15485914)
RGD
PMID:15485914
MGI:3511396
NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
G
Pou4f1
POU class 4 homeobox 1
acts_upstream_of involved_in
ISO IEA
MGI:1314872 (MGI:3056843|PMID:15492043) GO_REF:0000107
RGD Ensembl
PMID:15492043
GO_REF:0000107 MGI:3056843
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Pou4f3
POU class 4 homeobox 3
acts_upstream_of_or_within
ISO
MGI:1857425 (MGI:1277883|PMID:9735355)
RGD
PMID:9735355
MGI:1277883
NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
G
Ppargc1a
PPARG coactivator 1 alpha
acts_upstream_of involved_in
ISO IEA
(MGI:4462723|PMID:20566846) GO_REF:0000107
RGD Ensembl
PMID:20566846
GO_REF:0000107 MGI:4462723
NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:88059 (MGI:3617683|PMID:16478525)
RGD
PMID:16478525
MGI:3617683
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Ptges3
prostaglandin E synthase 3
IMP
RGD
PMID:19145491
RGD:5688073
NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084
G
Rb1
RB transcriptional corepressor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857242|MGI:1857339 (MGI:2150278|PMID:11549719), (MGI:3664376|PMID:7958874)
Ensembl RGD
PMID:7958874 PMID:11549719
GO_REF:0000107 MGI:2150278 MGI:3664376
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Scn2a
sodium voltage-gated channel alpha subunit 2
acts_upstream_of_or_within involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2180186 (MGI:2179539|PMID:10827969)
UniProt Ensembl RGD
PMID:10827969
GO_REF:0000024 GO_REF:0000107 MGI:2179539
NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214
G
Sct
secretin
acts_upstream_of
ISO
MGI:3815315 (MGI:4939559|PMID:21159798)
RGD
PMID:21159798
MGI:4939559
NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
G
Siah1
siah E3 ubiquitin protein ligase 1
involved_in
IMP
PMID:15951807
UniProt
PMID:15951807
RGD:8554488
NCBI chr19:20,378,908...20,402,512
Ensembl chr19:20,378,439...20,403,808
G
Sirt1
sirtuin 1
IMP
RGD
PMID:24183892
RGD:9495918
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
G
Slc1a1
solute carrier family 1 member 1
involved_in
ISO
(MGI:6501071|PMID:27040821)
RGD
PMID:27040821
MGI:6501071
NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
G
Snca
synuclein alpha
acts_upstream_of
ISO
MGI:2429773|MGI:892995 (MGI:3603712|PMID:15380020), (MGI:3690829|PMID:16269331)
RGD
PMID:15380020 PMID:16269331
MGI:3603712 MGI:3690829
NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
G
Sncb
synuclein, beta
acts_upstream_of
ISO
MGI:892995 (MGI:3690829|PMID:16269331)
RGD
PMID:16269331
MGI:3690829
NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
MGI:6451766 (MGI:6141536|PMID:28237315)
RGD
PMID:28237315
MGI:6141536
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Stxbp1
syntaxin binding protein 1
acts_upstream_of
ISO
MGI:2183278 (MGI:3588009|PMID:15255974)
RGD
PMID:15255974
MGI:3588009
NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
G
Syngap1
synaptic Ras GTPase activating protein 1
acts_upstream_of involved_in
ISO IEA
MGI:3511175 (MGI:3590468|PMID:15733080) GO_REF:0000107
RGD Ensembl
PMID:15733080
GO_REF:0000107 MGI:3590468
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of
ISO
MGI:104672 (MGI:5049826|PMID:21539825)
RGD
PMID:21539825
MGI:5049826
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Tfap2b
transcription factor AP-2 beta
acts_upstream_of
ISO
MGI:104671 (MGI:5049826|PMID:21539825)
RGD
PMID:21539825
MGI:5049826
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
(MGI:6155267|PMID:29715368)
RGD
PMID:29715368
MGI:6155267
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
acts_upstream_of
ISO
MGI:1857259 (MGI:3696537|PMID:17159989)
RGD
PMID:17159989
MGI:3696537
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tnfrsf21
TNF receptor superfamily member 21
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (MGI:3838040|PMID:19225519), (MGI:5546316|PMID:23559013)
UniProt GO_Central RGD
PMID:19225519 PMID:23559013
GO_REF:0000024 GO_REF:0000033 MGI:3838040 MGI:5546316
NCBI chr 9:17,879,156...17,954,085
Ensembl chr 9:17,879,156...17,954,085
G
Tp53
tumor protein p53
acts_upstream_of_or_within involved_in
ISO IEA
MGI:97740 (MGI:3511396|PMID:15485914), (MGI:3720993|PMID:17591690) GO_REF:0000107 MGI:1335098|MGI:1857263|MGI:1857590 (MGI:1203920|PMID:9608530), (MGI:1860400|PMID:10911993), (MGI:1929535|PMID:11150333), (MGI:3691523|PMID:11092819)
RGD Ensembl
PMID:9608530 PMID:10911993 PMID:11092819 PMID:11150333 PMID:15485914 PMID:17591690 More...
GO_REF:0000107 MGI:1203920 MGI:1860400 MGI:1929535 MGI:3511396 MGI:3691523 MGI:3720993
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Tp63
tumor protein p63
acts_upstream_of_or_within
ISO
MGI:1934580 (MGI:3615730|PMID:16337913)
RGD
PMID:16337913
MGI:3615730
NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
G
Trpc5
transient receptor potential cation channel, subfamily C, member 5
involved_in
ISO
(MGI:6450314|PMID:32110987)
RGD
PMID:32110987
MGI:6450314
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
G
Tuba1a
tubulin, alpha 1A
involved_in
ISO
MGI:3617352 (MGI:5316577|PMID:21875651)
RGD
PMID:21875651
MGI:5316577
NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
G
Tyro3
TYRO3 protein tyrosine kinase
acts_upstream_of involved_in
ISO IEA
MGI:1347244 (MGI:3817816|PMID:18787040) GO_REF:0000107
RGD Ensembl
PMID:18787040
GO_REF:0000107 MGI:3817816
NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142
G
Usp53
ubiquitin specific peptidase 53
acts_upstream_of_or_within
ISO
MGI:3708452 (MGI:5703670|PMID:26609154)
RGD
PMID:26609154
MGI:5703670
NCBI chr 2:211,059,512...211,120,942
Ensembl chr 2:211,059,520...211,120,943
G
Vegfa
vascular endothelial growth factor A
IMP
RGD
PMID:17591953
RGD:7421609
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Vps54
VPS54 subunit of GARP complex
involved_in
ISO
MGI:1857091 (MGI:4830050|PMID:20558160), (MGI:6430941|PMID:32345721)
RGD
PMID:20558160 PMID:32345721
MGI:4830050 MGI:6430941
NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
G
Xiap
X-linked inhibitor of apoptosis
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:2681362|PMID:14623868) GO_REF:0000107
RGD Ensembl
PMID:14623868
GO_REF:0000107 MGI:2681362
NCBI chr X:120,890,537...120,938,413
Ensembl chr X:120,897,907...120,934,700
G
Xrcc4
X-ray repair cross complementing 4
acts_upstream_of
ISO
MGI:1926771 (MGI:1913213|PMID:9875844)
RGD
PMID:9875844
MGI:1913213
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
G
Zfp110
zinc finger protein 110
involved_in
ISO
(MGI:3579762|PMID:15668238), (MGI:3610521|PMID:16252010)
RGD
PMID:15668238 PMID:16252010
MGI:3579762 MGI:3610521
NCBI chr 1:73,445,303...73,461,112
Ensembl chr 1:73,445,336...73,461,086
G
Zfp212
Zinc finger protein 212
acts_upstream_of_or_within
ISO
MGI:6830528 (MGI:6828407|PMID:34815492)
RGD
PMID:34815492
MGI:6828407
NCBI chr 4:76,923,638...76,936,076
Ensembl chr 4:76,923,668...76,936,066
G
Camk2b
calcium/calmodulin-dependent protein kinase II beta
IEP
RGD
PMID:25126162
RGD:13681928
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
G
Draxin
dorsal inhibitory axon guidance protein
acts_upstream_of
ISO
MGI:3833678 (MGI:4430162|PMID:19808066)
RGD
PMID:19808066
MGI:4430162
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Elk1
ETS transcription factor ELK1
IMP
RGD
PMID:16549787
RGD:7488911
NCBI chr X:1,138,826...1,155,713
Ensembl chr X:1,139,756...1,155,713
G
Parp2
poly (ADP-ribose) polymerase 2
IMP
RGD
PMID:19422384
RGD:13514045
NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338
G
Stambp
Stam binding protein
acts_upstream_of
ISO
MGI:2180168 (MGI:2154022|PMID:11713295)
RGD
PMID:11713295
MGI:2154022
NCBI chr 4:116,055,563...116,083,563
Ensembl chr 4:116,056,057...116,080,543
G
Adarb1
adenosine deaminase, RNA-specific, B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4840554 (MGI:4831065|PMID:20826656)
Ensembl RGD
PMID:20826656
GO_REF:0000107 MGI:4831065
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
G
Agrn
agrin
acts_upstream_of
ISO
MGI:1929777 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
G
Atf2
activating transcription factor 2
involved_in
ISO IEA
MGI:3720850 (MGI:5007596|PMID:21533046) GO_REF:0000107
RGD Ensembl
PMID:21533046
GO_REF:0000107 MGI:5007596
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of acts_upstream_of_or_within
ISO
MGI:1857429 (MGI:3580738|PMID:15944391), (MGI:3695831|PMID:17192424) MGI:1857429 (MGI:3029650|PMID:12917363)
RGD
PMID:12917363 PMID:15944391 PMID:17192424
MGI:3029650 MGI:3580738 MGI:3695831
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of involved_in
ISO IEA
(MGI:77306|PMID:7472523) GO_REF:0000107
RGD Ensembl
PMID:7472523
GO_REF:0000107 MGI:77306
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Cntfr
ciliary neurotrophic factor receptor
acts_upstream_of involved_in
ISO IEA
MGI:2181046|MGI:3528869 (MGI:2137500|PMID:11312299), (MGI:3798128|PMID:18588528) GO_REF:0000107
RGD Ensembl
PMID:11312299 PMID:18588528
GO_REF:0000107 MGI:2137500 MGI:3798128
NCBI chr 5:56,823,448...56,861,049
Ensembl chr 5:56,823,965...56,841,392
G
Erbb3
erb-b2 receptor tyrosine kinase 3
acts_upstream_of involved_in
ISO IEA
MGI:1929072|MGI:1929598 (MGI:1097830|PMID:9338783) GO_REF:0000107
RGD Ensembl
PMID:9338783
GO_REF:0000107 MGI:1097830
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Fadd
Fas associated via death domain
acts_upstream_of_or_within
ISO
(MGI:2675560|PMID:13679421)
RGD
PMID:13679421
MGI:2675560
NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within involved_in
ISO IBA IEA
MGI:1856334|MGI:1861923 (MGI:2675560|PMID:13679421) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:13679421
GO_REF:0000033 GO_REF:0000118 MGI:2675560
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Musk
muscle associated receptor tyrosine kinase
acts_upstream_of
ISO
MGI:1929066 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
G
Nefl
neurofilament light chain
acts_upstream_of
ISO
MGI:2180095 (MGI:1096547|PMID:7946341), (MGI:1861055|PMID:10884316)
RGD
PMID:7946341 PMID:10884316
MGI:1096547 MGI:1861055
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Rapsn
receptor-associated protein of the synapse
acts_upstream_of
ISO
MGI:2148091 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 3:77,015,073...77,024,378
Ensembl chr 3:76,983,471...77,024,373
G
Rhoa
ras homolog family member A
acts_upstream_of
ISO
(MGI:3588743|PMID:15071095)
RGD
PMID:15071095
MGI:3588743
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
acts_upstream_of involved_in
ISO IEA
(MGI:3588743|PMID:15071095) GO_REF:0000107
RGD Ensembl
PMID:15071095
GO_REF:0000107 MGI:3588743
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Slc1a1
solute carrier family 1 member 1
acts_upstream_of_or_within
ISO
MGI:2655190 (MGI:5508628|PMID:16858406)
RGD
PMID:16858406
MGI:5508628
NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
G
Spg11
SPG11 vesicle trafficking associated, spatacsin
acts_upstream_of_or_within
ISO
MGI:6451766 (MGI:6141536|PMID:28237315)
RGD
PMID:28237315
MGI:6141536
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
G
Tnfrsf22
tumor necrosis factor receptor superfamily, member 22
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 1:198,840,452...198,860,713
Ensembl chr 1:198,840,453...198,856,309
G
Tnfrsf26
tumor necrosis factor receptor superfamily, member 26
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 1:198,802,968...198,823,032
Ensembl chr 1:198,802,971...198,823,418
G
Vps54
VPS54 subunit of GARP complex
involved_in
IEA ISO
GO_REF:0000107 MGI:1857091 (MGI:3784333|PMID:10952021), (MGI:6196751|PMID:29890290)
Ensembl RGD
PMID:10952021 PMID:29890290
GO_REF:0000107 MGI:3784333 MGI:6196751
NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
G
Hyou1
hypoxia up-regulated 1
involved_in
ISO IEA
(MGI:3697528|PMID:17116640) GO_REF:0000107
RGD Ensembl
PMID:17116640
GO_REF:0000107 MGI:3697528
NCBI chr 8:44,706,073...44,718,189
Ensembl chr 8:44,706,263...44,718,186
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO IEA
UniProtKB:O15354 (MGI:3697528|PMID:17116640), (MGI:5495588|PMID:23453807) GO_REF:0000107
RGD Ensembl
PMID:17116640 PMID:23453807
GO_REF:0000107 MGI:3697528 MGI:5495588
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Cx3cl1
C-X3-C motif chemokine ligand 1
involved_in
ISO
UniProtKB:P35411 (PMID:10869418)
RGD
PMID:10869418
NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
G
Cx3cr1
C-X3-C motif chemokine receptor 1
involved_in
IGI
PMID:10869418
ARUK-UCL
PMID:10869418
RGD:4892026
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
G
Draxin
dorsal inhibitory axon guidance protein
acts_upstream_of_or_within
ISO
MGI:3833678 (MGI:4430162|PMID:19808066)
RGD
PMID:19808066
MGI:4430162
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Lcn2
lipocalin 2
IMP
RGD
PMID:32174475
RGD:126790555
NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
G
Stambp
Stam binding protein
acts_upstream_of_or_within
ISO
MGI:2180168 (MGI:2154022|PMID:11713295)
RGD
PMID:11713295
MGI:2154022
NCBI chr 4:116,055,563...116,083,563
Ensembl chr 4:116,056,057...116,080,543
G
Park7
Parkinsonism associated deglycase
involved_in
ISO IEA
UniProtKB:Q99LX0 (PMID:14652021) GO_REF:0000107 (MGI:5613479|PMID:14652021)
RGD Ensembl
PMID:14652021
GO_REF:0000107 MGI:5613479
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:21177249), (PMID:23261939)
RGD
PMID:21177249 PMID:23261939
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Bag1
BAG cochaperone 1
acts_upstream_of_or_within
ISO
MGI:3528234 (MGI:3603966|PMID:16116448)
RGD
PMID:16116448
MGI:3603966
NCBI chr 5:56,068,494...56,081,075
Ensembl chr 5:56,068,494...56,081,075
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:77306|PMID:7472523) GO_REF:0000107
RGD Ensembl
PMID:7472523
GO_REF:0000107 MGI:77306
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Cntfr
ciliary neurotrophic factor receptor
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2181046|MGI:3528869 (MGI:2137500|PMID:11312299), (MGI:3798128|PMID:18588528) GO_REF:0000107
RGD Ensembl
PMID:11312299 PMID:18588528
GO_REF:0000107 MGI:2137500 MGI:3798128
NCBI chr 5:56,823,448...56,861,049
Ensembl chr 5:56,823,965...56,841,392
G
Crlf1
cytokine receptor-like factor 1
involved_in
ISO
(MGI:2677656|PMID:14523086)
RGD
PMID:14523086
MGI:2677656
NCBI chr16:18,924,722...18,936,049
Ensembl chr16:18,924,722...18,935,997
G
Erbb3
erb-b2 receptor tyrosine kinase 3
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1929072|MGI:1929598 (MGI:1097830|PMID:9338783) GO_REF:0000107
RGD Ensembl
PMID:9338783
GO_REF:0000107 MGI:1097830
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Map2k4
mitogen activated protein kinase kinase 4
acts_upstream_of_or_within
ISO
MGI:3769117 (MGI:5605640|PMID:25100604)
RGD
PMID:25100604
MGI:5605640
NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993
G
Map3k12
mitogen activated protein kinase kinase kinase 12
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3760641 (MGI:5605640|PMID:25100604)
Ensembl RGD
PMID:25100604
GO_REF:0000107 MGI:5605640
NCBI chr 7:133,630,267...133,648,464
Ensembl chr 7:133,630,835...133,640,789
G
Nefl
neurofilament light chain
acts_upstream_of_or_within
ISO
MGI:2180095 (MGI:1096547|PMID:7946341), (MGI:1861055|PMID:10884316)
RGD
PMID:7946341 PMID:10884316
MGI:1096547 MGI:1861055
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Rhoa
ras homolog family member A
acts_upstream_of_or_within
ISO
(MGI:3588743|PMID:15071095)
RGD
PMID:15071095
MGI:3588743
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3588743|PMID:15071095) GO_REF:0000107
RGD Ensembl
PMID:15071095
GO_REF:0000107 MGI:3588743
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Vps54
VPS54 subunit of GARP complex
involved_in
ISO IEA
MGI:1857091 (MGI:3612827|PMID:16244655) GO_REF:0000107
RGD Ensembl
PMID:16244655
GO_REF:0000107 MGI:3612827
NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
G
Zpr1
ZPR1 zinc finger
involved_in
ISO
(MGI:3575865|PMID:15767679)
RGD
PMID:15767679
MGI:3575865
NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
G
Aars1
alanyl-tRNA synthetase 1
acts_upstream_of_or_within
ISO
MGI:3618596 (MGI:3640843|PMID:16906134)
RGD
PMID:16906134
MGI:3640843
NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
G
Adam8
ADAM metallopeptidase domain 8
involved_in
ISO
(MGI:3040545|PMID:14761956)
RGD
PMID:14761956
MGI:3040545
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Adnp
activity-dependent neuroprotector homeobox
acts_upstream_of_or_within
IDA ISO
(MGI:1331215|PMID:10037502)
RGD
PMID:10037502 PMID:16938277
MGI:1331215 , RGD:2312775
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
G
Adora2a
adenosine A2a receptor
IDA
RGD
PMID:15211592
RGD:1625666
NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
G
Agap2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
involved_in acts_upstream_of_or_within
IMP IBA IEA ISO
PMID:14528310 GO_REF:0000033 GO_REF:0000118 UniProtKB:Q01105|UniProtKB:Q99538 (PMID:18374643) PMID:18469807
GO_Central TreeGrafter RGD
PMID:18374643 PMID:14528310 PMID:18469807
GO_REF:0000033 GO_REF:0000118, RGD:1299350 , RGD:8553892
NCBI chr 7:62,897,282...62,914,295
Ensembl chr 7:62,897,282...62,914,295
G
Agt
angiotensinogen
acts_upstream_of_or_within
ISO
MGI:2136636 (MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Agtr1a
angiotensin II receptor, type 1a
NOT|acts_upstream_of_or_within
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
G
Agtr1b
angiotensin II receptor, type 1b
NOT|acts_upstream_of_or_within
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232
G
Agtr2
angiotensin II receptor, type 2
NOT|acts_upstream_of_or_within
ISO
(MGI:2385817|PMID:9310306)
RGD
PMID:9310306
MGI:2385817
NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057
G
Alkbh1
alkB homolog 1, histone H2A dioxygenase
acts_upstream_of_or_within
ISO
(MGI:3689639|PMID:16860792)
RGD
PMID:16860792
MGI:3689639
NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759
G
Ambra1
autophagy and beclin 1 regulator 1
acts_upstream_of_or_within
ISO
MGI:3715977 (MGI:3715542|PMID:17589504)
RGD
PMID:17589504
MGI:3715542
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Amigo2
adhesion molecule with Ig like domain 2
IMP
RGD
PMID:12843293
RGD:1299593
NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695
G
Angpt1
angiopoietin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:98664 (MGI:3848848|PMID:19409199)
Ensembl RGD
PMID:19409199
GO_REF:0000107 MGI:3848848
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
G
Apoe
apolipoprotein E
involved_in
IDA IEA
retinal ganglion cells GO_REF:0000118
TreeGrafter RGD
PMID:17314289
GO_REF:0000118, RGD:1625020
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Arrb1
arrestin, beta 1
IMP
RGD
PMID:26621121
RGD:11537517
NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
G
Arrb2
arrestin, beta 2
IMP
RGD
PMID:26621121
RGD:11537517
NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
G
Atg7
autophagy related 7
IMP
RGD
PMID:23800795
RGD:11557991
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856098 (MGI:3689271|PMID:17003121)
RGD
PMID:17003121
MGI:3689271
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
G
Axl
Axl receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:104294 (MGI:3817816|PMID:18787040)
RGD
PMID:18787040
MGI:3817816
NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
G
Barhl1
BarH-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:2181383 (MGI:2181080|PMID:12091321), (MGI:3708890|PMID:16752387)
RGD
PMID:12091321 PMID:16752387
MGI:2181080 MGI:3708890
NCBI chr 3:12,241,327...12,248,649
Ensembl chr 3:12,241,327...12,248,649
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of_or_within
ISO
(MGI:79659|PMID:8625820)
RGD
PMID:8625820
MGI:79659
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
(PMID:7546744) MGI:1857134|MGI:1857430|MGI:2156165|MGI:2158305 (MGI:1098920|PMID:9374413), (MGI:1336407|PMID:10321489), (MGI:1860799|PMID:10762311), (MGI:1891561|PMID:11027399), (MGI:3655321|PMID:9681465), (MGI:79659|PMID:8625820), (MGI:894621|PMID:9153592)
RGD
PMID:7546744 PMID:8625820 PMID:9153592 PMID:9374413 PMID:9681465 PMID:10321489 PMID:10762311 PMID:11027399 More...
MGI:1098920 MGI:1336407 MGI:1860799 MGI:1891561 MGI:3655321 MGI:79659 MGI:894621
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Bcl2l1
Bcl2-like 1
acts_upstream_of_or_within
ISO
MGI:1277950|MGI:2158303|MGI:99702 (MGI:1929535|PMID:11150333), (MGI:3057092|PMID:15231831), (MGI:72933|PMID:7753802), (MGI:79659|PMID:8625820), (MGI:86927|PMID:9096145)
RGD
PMID:7753802 PMID:8625820 PMID:9096145 PMID:11150333 PMID:15231831
MGI:1929535 MGI:3057092 MGI:72933 MGI:79659 MGI:86927
NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within involved_in
ISO IBA IEA
MGI:1930038 (MGI:3590457|PMID:15869495), (MGI:80051|PMID:8861722) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:8861722 PMID:15869495
GO_REF:0000033 GO_REF:0000118 MGI:3590457 MGI:80051
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Birc5
baculoviral IAP repeat-containing 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176173|MGI:3028474 (MGI:3603082|PMID:16049172)
Ensembl RGD
PMID:16049172
GO_REF:0000107 MGI:3603082
NCBI chr10:103,072,530...103,081,382
Ensembl chr10:103,073,408...103,081,380
G
Bok
BCL2 family apoptosis regulator BOK
involved_in
ISO
(MGI:5796062|PMID:27098698)
RGD
PMID:27098698
MGI:5796062
NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
IMP ISO
MGI:1857579 (MGI:3664149|PMID:16980614)
RGD
PMID:16980614 PMID:18194435
MGI:3664149 , RGD:2315872
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Btg2
BTG anti-proliferation factor 2
IMP
RGD
PMID:12360398
RGD:2289077
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
G
C5ar1
complement C5a receptor 1
IDA IMP
RGD
PMID:15292245 PMID:15292245
RGD:2303020 , RGD:2303020
NCBI chr 1:76,948,622...76,959,826
G
Cacna1a
calcium voltage-gated channel subunit alpha1 A
acts_upstream_of_or_within
ISO
MGI:1856209|MGI:1856210 (MGI:53718|PMID:4941467), (MGI:84024|PMID:8929530)
RGD
PMID:4941467 PMID:8929530
MGI:53718 MGI:84024
NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
G
Cblc
Cbl proto-oncogene C
acts_upstream_of_or_within
ISO
(MGI:3806397|PMID:18753381)
RGD
PMID:18753381
MGI:3806397
NCBI chr 1:79,439,975...79,456,755
Ensembl chr 1:79,439,977...79,456,755
G
Ccl2
C-C motif chemokine ligand 2
involved_in
ISO
(PMID:12753088)
RGD
PMID:12753088
NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
G
Ccnd1
cyclin D1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857280 (MGI:6507297|PMID:26876175) GO_REF:0000107
RGD Ensembl
PMID:26876175
GO_REF:0000107 MGI:6507297
NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
G
Cd2ap
CD2-associated protein
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3806397|PMID:18753381) GO_REF:0000107
RGD Ensembl
PMID:18753381
GO_REF:0000107 MGI:3806397
NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199
G
Cebpb
CCAAT/enhancer binding protein beta
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:2153436|PMID:11684016) GO_REF:0000107
RGD Ensembl
PMID:11684016
GO_REF:0000107 MGI:2153436
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Chl1
cell adhesion molecule L1-like
involved_in
ISO
(MGI:3040545|PMID:14761956)
RGD
PMID:14761956
MGI:3040545
NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
G
Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
involved_in
ISO
(PMID:21172805)
RGD
PMID:21172805
NCBI chr X:67,350,376...67,355,072
Ensembl chr X:67,350,373...67,355,162
G
Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(PMID:10966616), (PMID:11285233)
RGD
PMID:10966616 PMID:11285233
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
G
Cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin
acts_upstream_of_or_within
ISO
(MGI:3697749|PMID:17189291)
RGD
PMID:17189291
MGI:3697749
NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
G
Cln8
CLN8, transmembrane ER and ERGIC protein
acts_upstream_of_or_within
ISO
MGI:1856959 (MGI:3695117|PMID:15565184)
RGD
PMID:15565184
MGI:3695117
NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
G
Clu
clusterin
involved_in
IGI
PMID:23164821
ARUK-UCL
PMID:23164821
RGD:12903240
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
G
Cntf
ciliary neurotrophic factor
involved_in
IDA IBA ISO IEA
increased survival of axotomized adult retinal ganglion cells GO_REF:0000033 (PMID:10966616) GO_REF:0000107
GO_Central RGD Ensembl
PMID:10966616 PMID:15574731
GO_REF:0000033 GO_REF:0000107, RGD:1626128
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Cntfr
ciliary neurotrophic factor receptor
involved_in
ISO
(PMID:19386761)
RGD
PMID:19386761
NCBI chr 5:56,823,448...56,861,049
Ensembl chr 5:56,823,965...56,841,392
G
Coro1a
coronin 1A
acts_upstream_of_or_within
ISO
MGI:97321 (MGI:5559799|PMID:24270184)
RGD
PMID:24270184
MGI:5559799
NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
G
Cpeb4
cytoplasmic polyadenylation element binding protein 4
involved_in
IMP
PMID:20937770
UniProt
PMID:20937770
RGD:8553637
NCBI chr10:15,717,794...15,780,482
Ensembl chr10:15,717,794...15,780,603
G
Crhr1
corticotropin releasing hormone receptor 1
IMP
RGD
PMID:11784785
RGD:70397
NCBI chr10:89,040,186...89,083,481
Ensembl chr10:89,040,203...89,083,481
G
Crlf1
cytokine receptor-like factor 1
involved_in
ISO
(PMID:10966616)
RGD
PMID:10966616
NCBI chr16:18,924,722...18,936,049
Ensembl chr16:18,924,722...18,935,997
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2135607 (MGI:5437773|PMID:22956852)
RGD
PMID:22956852
MGI:5437773
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dlx1
distal-less homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857826 (MGI:3604035|PMID:16007083)
Ensembl RGD
PMID:16007083
GO_REF:0000107 MGI:3604035
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dnajc5
DnaJ heat shock protein family (Hsp40) member C5
acts_upstream_of_or_within
ISO
MGI:1277151|MGI:1889011 (MGI:3690829|PMID:16269331)
RGD
PMID:16269331
MGI:3690829
NCBI chr 3:168,621,905...168,656,570
Ensembl chr 3:168,621,969...168,655,935
G
En1
engrailed homeobox 1
involved_in
ISO
UniProtKB:P09066 (MGI:3578062|PMID:15175251)
RGD
PMID:15175251
MGI:3578062
NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
G
En2
engrailed homeobox 2
involved_in
ISO
UniProtKB:P09065 (MGI:3578062|PMID:15175251)
RGD
PMID:15175251
MGI:3578062
NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943
G
Epor
erythropoietin receptor
IMP
RGD
PMID:12451129 PMID:18711747
RGD:628490 , RGD:11041671
NCBI chr 8:20,489,678...20,494,257
Ensembl chr 8:20,489,678...20,494,257
G
Erbb3
erb-b2 receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
MGI:1929072|MGI:1929598 (MGI:1097830|PMID:9338783)
RGD
PMID:9338783
MGI:1097830
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
G
Esr1
estrogen receptor 1
IDA
RGD
PMID:15126114
RGD:1582270
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
G
Esr2
estrogen receptor 2
IDA
RGD
PMID:15126114
RGD:1582270
NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
G
F2r
coagulation factor II (thrombin) receptor
IMP
RGD
PMID:11919511
RGD:1582353
NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
G
Faim2
Fas apoptotic inhibitory molecule 2
acts_upstream_of_or_within
ISO
MGI:4888719 (MGI:4880811|PMID:21209208)
RGD
PMID:21209208
MGI:4880811
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
G
Fbxo7
F-box protein 7
acts_upstream_of
IMP
PMID:26310625
ParkinsonsUK-UCL
PMID:26310625
RGD:11536096
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
G
Fgf20
fibroblast growth factor 20
involved_in
ISO
(PMID:16988046)
RGD
PMID:16988046
NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:95518 (MGI:3608165|PMID:16245339)
RGD
PMID:16245339
MGI:3608165
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
G
Fmr1
fragile X messenger ribonucleoprotein 1
IMP
RGD
PMID:22817682
RGD:11566024
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Foxb1
forkhead box B1
involved_in
ISO
(MGI:1352733|PMID:10662642)
RGD
PMID:10662642
MGI:1352733
NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781
G
Foxq1
forkhead box Q1
involved_in
ISO IEA
(PMID:28947385) GO_REF:0000107
RGD Ensembl
PMID:28947385
GO_REF:0000107
NCBI chr17:32,912,744...32,915,377
Ensembl chr17:32,912,744...32,915,377 Ensembl chr17:32,912,744...32,915,377
G
Fxn
frataxin
IMP
RGD
PMID:24242291 PMID:29223733
RGD:401793716 , RGD:401793739
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
G
Fyn
FYN proto-oncogene, Src family tyrosine kinase
involved_in
IMP
PMID:18469807
UniProt
PMID:18469807
RGD:8553892
NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
G
Fzd9
frizzled class receptor 9
involved_in
ISO ISS
(PMID:27509850) GO_REF:0000024
RGD UniProt
PMID:27509850
GO_REF:0000024
NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
G
Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within
ISO
(MGI:3762988|PMID:17954912)
RGD
PMID:17954912
MGI:3762988
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
G
Gbe1
1,4-alpha-glucan branching enzyme 1
IMP
RGD
PMID:23607684
RGD:19165127
NCBI chr11:8,734,806...9,000,226
Ensembl chr11:8,734,820...9,000,210
G
Gclc
glutamate-cysteine ligase, catalytic subunit
IMP
RGD
PMID:16183645
RGD:1582661
NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
G
Gclm
glutamate cysteine ligase, modifier subunit
IMP
RGD
PMID:16183645
RGD:1582661
NCBI chr 2:210,347,482...210,367,537
Ensembl chr 2:210,347,482...210,367,535
G
Gdf5
growth differentiation factor 5
IDA
RGD
PMID:15906156
RGD:1598708
NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612
G
Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISO IBA IEA ISS
(PMID:8493557) GO_REF:0000033 GO_REF:0000107 MGI:3528739 (MGI:3527364|PMID:15582775) GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:8493557 PMID:15582775
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3527364
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Gfral
GDNF family receptor alpha like
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3610244|PMID:16086688) GO_REF:0000107
RGD Ensembl
PMID:16086688
GO_REF:0000107 MGI:3610244
NCBI chr 8:76,917,894...76,963,258
Ensembl chr 8:76,918,657...76,959,425
G
Glp1r
glucagon-like peptide 1 receptor
IDA
RGD
PMID:12925848
RGD:1598440
NCBI chr20:8,972,004...9,010,241
Ensembl chr20:8,972,004...9,010,241
G
Gpi
glucose-6-phosphate isomerase
IMP
RGD
PMID:12615053
RGD:1600634
NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086
G
Gprasp3
G protein-coupled receptor associated sorting protein family member 3
involved_in
ISO
(MGI:5545985|PMID:21199326)
RGD
PMID:21199326
MGI:5545985
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
G
Grik2
glutamate ionotropic receptor kainate type subunit 2
acts_upstream_of_or_within
ISO
MGI:95819 (MGI:1344923|PMID:10479699)
RGD
PMID:10479699
MGI:1344923
NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
G
Grin1
glutamate ionotropic receptor NMDA type subunit 1
acts_upstream_of_or_within
ISO
MGI:1928270|MGI:99702 (MGI:3695621|PMID:17077143)
RGD
PMID:17077143
MGI:3695621
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
G
Grk1
G protein-coupled receptor kinase 1
acts_upstream_of_or_within
ISO
MGI:2668595 (MGI:1334014|PMID:10097103)
RGD
PMID:10097103
MGI:1334014
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
G
Grm7
glutamate metabotropic receptor 7
IDA
RGD
PMID:26621121
RGD:11537517
NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344
G
Grn
granulin precursor
involved_in
ISO ISS IEA
(PMID:18378771) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:18378771
GO_REF:0000024 GO_REF:0000107
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
G
H19
H19 imprinted maternally expressed transcript
IMP
RGD
PMID:31170091
RGD:242905188
NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
G
Hdac1
histone deacetylase 1
IMP
RGD
PMID:15769944
RGD:2306221
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
G
Hdgf
heparin binding growth factor
acts_upstream_of_or_within
ISO
(MGI:3046368|PMID:15140875)
RGD
PMID:15140875
MGI:3046368
NCBI chr 2:173,370,147...173,379,756
Ensembl chr 2:173,370,465...173,379,747
G
Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO
MGI:2677899 (MGI:2676530|PMID:12972594)
RGD
PMID:12972594
MGI:2676530
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hipk2
homeodomain interacting protein kinase 2
acts_upstream_of_or_within
ISO
MGI:3487301 (MGI:3696537|PMID:17159989)
RGD
PMID:17159989
MGI:3696537
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
G
Hmox1
heme oxygenase 1
IMP
RGD
PMID:19177228
RGD:4145319
NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
G
Hras
HRas proto-oncogene, GTPase
acts_upstream_of_or_within
ISO
MGI:96680|MGI:97306 (MGI:1861510|PMID:10845775)
RGD
PMID:10845775
MGI:1861510
NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
G
Hsp90ab1
heat shock protein 90 alpha family class B member 1
IMP
ganglion cells
RGD
PMID:18443201
RGD:4108490
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
G
Hspd1
heat shock protein family D (Hsp60) member 1
IMP
RGD
PMID:17150954
RGD:1624231
NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
G
Il10
interleukin 10
IDA
RGD
PMID:28753520
RGD:14975275
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Il27ra
interleukin 27 receptor subunit alpha
involved_in
ISO
(PMID:19386761)
RGD
PMID:19386761
NCBI chr19:24,109,963...24,121,977
Ensembl chr19:24,109,972...24,121,938
G
Il6
interleukin 6
IDA
Cerebellar granule neurons
RGD
PMID:19061939
RGD:2306937
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Il6st
interleukin 6 cytokine family signal transducer
involved_in
ISO IEA
(PMID:19386761) GO_REF:0000107
RGD Ensembl
PMID:19386761
GO_REF:0000107
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
G
Ilk
integrin-linked kinase
IMP
RGD
PMID:12629168
RGD:2302091
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Isl1
ISL LIM homeobox 1
involved_in
ISO IEA
(MGI:3815381|PMID:18849985) GO_REF:0000107
RGD Ensembl
PMID:18849985
GO_REF:0000107 MGI:3815381
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Itsn1
intersectin 1
acts_upstream_of_or_within
ISO
(MGI:3768571|PMID:17875942)
RGD
PMID:17875942
MGI:3768571
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
G
Jak2
Janus kinase 2
IMP
protection by nicotine against beta-amyloid-induced cell death
RGD
PMID:12244045 PMID:23236988
RGD:633056 , RGD:10403076
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
MGI:2445420 (MGI:3772001|PMID:15233917)
RGD
PMID:15233917
MGI:3772001
NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
G
Kdm2b
lysine demethylase 2B
involved_in
ISO
(MGI:4949568|PMID:21220025)
RGD
PMID:21220025
MGI:4949568
NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
G
Kdr
kinase insert domain receptor
involved_in
IMP ISO IEA
motor neurons after hypoxia UniProtKB:O15041 (MGI:5646051|PMID:25985275) GO_REF:0000107
RGD Ensembl
PMID:25985275 PMID:15780476
GO_REF:0000107 MGI:5646051 , RGD:2292011
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Kif14
kinesin family member 14
involved_in
ISO
(MGI:5485315|PMID:23308235)
RGD
PMID:23308235
MGI:5485315
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of_or_within
ISO
MGI:96224|MGI:97306 (MGI:1861510|PMID:10845775)
RGD
PMID:10845775
MGI:1861510
NCBI chr 4:178,185,418...178,218,484
G
Lgmn
legumain
acts_upstream_of_or_within
ISO
UniProtKB:Q01105|UniProtKB:Q99490 (PMID:18374643)
RGD
PMID:18374643
NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
G
Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:107202|MGI:1857732|MGI:98834 (MGI:1860400|PMID:10911993), (MGI:1913213|PMID:9875844), (MGI:3652689|PMID:16777961)
RGD
PMID:9875844 PMID:10911993 PMID:16777961
MGI:1860400 MGI:1913213 MGI:3652689
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
G
Lrp1
LDL receptor related protein 1
IMP IDA
RGD
PMID:17314289 PMID:24086544
RGD:1625020 , RGD:13800518
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Mag
myelin-associated glycoprotein
involved_in
ISS ISO
GO_REF:0000024 (MGI:5819331|PMID:26335717)
UniProt RGD
PMID:26335717
GO_REF:0000024 MGI:5819331
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Mdk
midkine
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3839096|PMID:17230638) (PMID:12573468)
UniProt Ensembl RGD
PMID:12573468 PMID:17230638
GO_REF:0000024 GO_REF:0000107 MGI:3839096
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mecp2
methyl CpG binding protein 2
acts_upstream_of_or_within
ISO
MGI:2137311 (MGI:3772310|PMID:17997046)
RGD
PMID:17997046
MGI:3772310
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS IDA ISO
GO_REF:0000024 PMID:19103177 (MGI:5284763|PMID:18579729)
UniProt RGD
PMID:18579729 PMID:19103177
GO_REF:0000024 MGI:5284763 , RGD:8554846
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Mir15b
microRNA 15b
involved_in
ISO
UniProtKB:P05067-PRO_0000000092 (PMID:29207665)
RGD
PMID:29207665
NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
G
Mir21
microRNA 21
IMP IDA
RGD
PMID:31102912 PMID:25484256 PMID:20840605
RGD:41410823 , RGD:151893491 , RGD:41410884
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir222
microRNA 222
IDA
RGD
PMID:25484256
RGD:151893491
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mir494
microRNA 494
IDA
RGD
PMID:32308116
RGD:156420143
NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
G
Msh2
mutS homolog 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857940 (MGI:3640229|PMID:16805809)
Ensembl RGD
PMID:16805809
GO_REF:0000107 MGI:3640229
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
G
Mt3
metallothionein 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5315330|PMID:21359432)
UniProt RGD
PMID:21359432
GO_REF:0000024 MGI:5315330
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
G
Mtnr1b
melatonin receptor 1B
IDA
RGD
PMID:14962062
RGD:9588668
NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
G
Ndnf
neuron-derived neurotrophic factor
involved_in
ISO
(PMID:20969804)
RGD
PMID:20969804
NCBI chr 4:94,944,392...94,981,871
Ensembl chr 4:94,944,360...94,981,873
G
Nes
nestin
acts_upstream_of_or_within
ISO
MGI:3844224 (MGI:4889157|PMID:20963821)
RGD
PMID:20963821
MGI:4889157
NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777
G
Nfatc4
nuclear factor of activated T-cells 4
involved_in
ISO
(MGI:5426290|PMID:22586092)
RGD
PMID:22586092
MGI:5426290
NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
G
Nfix
nuclear factor I X
involved_in
ISO
MGI:3802570 (MGI:6116771|PMID:29437824)
RGD
PMID:29437824
MGI:6116771
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Ngf
nerve growth factor
involved_in acts_upstream_of_or_within
IMP IBA IEA ISO
PMID:21541365 GO_REF:0000033 GO_REF:0000118 MGI:1345961|MGI:99702 (MGI:2153439|PMID:11731452), (MGI:5559799|PMID:24270184)
GO_Central TreeGrafter RGD
PMID:11731452 PMID:24270184 PMID:21541365 PMID:29409115
GO_REF:0000033 GO_REF:0000118 MGI:2153439 MGI:5559799 , RGD:8554787 , RGD:402463967
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Ngfr
nerve growth factor receptor
IMP
neocortical subplate neurons, via ceramide
RGD
PMID:11438587
RGD:5508783
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nmnat1
nicotinamide nucleotide adenylyltransferase 1
IMP
RGD
PMID:27184051
RGD:13781945
NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180
G
Nos1
nitric oxide synthase 1
IMP
RGD
PMID:14752097
RGD:13824992
NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
G
Npm1
nucleophosmin 1
IMP
RGD
PMID:19123973
RGD:11534995
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
G
Nppc
natriuretic peptide C
involved_in
ISO
MGI:2388899 (MGI:6271658|PMID:29501420)
RGD
PMID:29501420
MGI:6271658
NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
G
Nr4a2
nuclear receptor subfamily 4, group A, member 2
involved_in acts_upstream_of_or_within
IEA IMP ISO
GO_REF:0000107 MGI:2157566 (MGI:1350702|PMID:10585298), (MGI:4462723|PMID:20566846)
Ensembl RGD
PMID:10585298 PMID:20566846 PMID:22294685
GO_REF:0000107 MGI:1350702 MGI:4462723 , RGD:124713574
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
acts_upstream_of_or_within
ISO
MGI:3037444 (MGI:3056852|PMID:15456880), (MGI:4462723|PMID:20566846)
RGD
PMID:15456880 PMID:20566846
MGI:3056852 MGI:4462723
NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
G
Nrbp2
nuclear receptor binding protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3819904|PMID:18619852)
UniProt RGD
PMID:18619852
GO_REF:0000024 MGI:3819904
NCBI chr 7:107,798,642...107,805,225
Ensembl chr 7:107,799,497...107,805,230
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5287519|PMID:21828096)
RGD
PMID:21828096
MGI:5287519
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntf3
neurotrophin 3
acts_upstream_of_or_within involved_in
ISO IEA IBA
(MGI:4414741|PMID:19915564) GO_REF:0000118 GO_REF:0000033
RGD TreeGrafter GO_Central
PMID:19915564
GO_REF:0000033 GO_REF:0000118 MGI:4414741
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Ntf4
neurotrophin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243
G
Ntrk1
neurotrophic receptor tyrosine kinase 1
involved_in acts_upstream_of_or_within
IMP ISO
(MGI:83009|PMID:8815902) MGI:99702 (MGI:2153439|PMID:11731452) PMID:21541365
RGD
PMID:8815902 PMID:11731452 PMID:19146958 PMID:21541365
MGI:2153439 MGI:83009 , RGD:5684376 , RGD:8554787
NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
G
Ntrk2
neurotrophic receptor tyrosine kinase 2
involved_in
IMP
PMID:10985347
UniProt
PMID:10985347
RGD:8553408
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
G
Optn
optineurin
IMP
RGD
PMID:22194658
RGD:7775021
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
G
Oxr1
oxidation resistance 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4330699 (MGI:5296990|PMID:22028674)
Ensembl RGD
PMID:22028674
GO_REF:0000107 MGI:5296990
NCBI chr 7:72,528,750...72,965,666
Ensembl chr 7:72,528,786...72,965,666
G
Park7
Parkinsonism associated deglycase
involved_in
ISS ISO
GO_REF:0000024 (PMID:22511790), (PMID:22683601)
ParkinsonsUK-UCL RGD
PMID:22511790 PMID:22683601
GO_REF:0000024
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
G
Pcdhgc3
protocadherin gamma subfamily C, 3
acts_upstream_of_or_within
ISO
MGI:1935203|MGI:1935205 (MGI:6450815|PMID:32633719)
RGD
PMID:32633719
MGI:6450815
NCBI chr18:29,633,016...29,667,865
Ensembl chr18:29,493,954...29,667,868
G
Pcdhgc5
protocadherin gamma subfamily C, 5
acts_upstream_of_or_within
ISO
MGI:1935201|MGI:1935205 (MGI:6450815|PMID:32633719)
RGD
PMID:32633719
MGI:6450815
NCBI chr18:29,647,201...29,666,336
Ensembl chr18:29,493,954...29,667,868
G
Pcp4
Purkinje cell protein 4
IMP IDA
RGD
PMID:21671256 PMID:11117479
RGD:9850149 , RGD:1579764
NCBI chr11:35,759,711...35,861,725
Ensembl chr11:35,800,713...35,861,725
G
Pdpk1
3-phosphoinositide dependent protein kinase-1
IMP
RGD
PMID:18971483
RGD:10449508
NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
G
Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
acts_upstream_of_or_within
ISO
(MGI:2670470|PMID:12904469)
RGD
PMID:12904469
MGI:2670470
NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
G
Pin1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
IMP
RGD
PMID:21443524
RGD:8693576
NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:18560593) (MGI:3847070|PMID:18560593), (MGI:5431185|PMID:22511790)
RGD
PMID:18560593 PMID:22511790
MGI:3847070 MGI:5431185
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Pla2g3
phospholipase A2, group III
involved_in
ISO
(PMID:17868035)
RGD
PMID:17868035
NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
G
Plxnd1
plexin D1
involved_in
ISO
(MGI:5646051|PMID:25985275)
RGD
PMID:25985275
MGI:5646051
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Pou4f1
POU class 4 homeobox 1
involved_in
IMP ISO IEA
(MGI:4454975|PMID:20096094) GO_REF:0000107
RGD Ensembl
PMID:20096094 PMID:11053412
GO_REF:0000107 MGI:4454975 , RGD:724643
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Ppargc1a
PPARG coactivator 1 alpha
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:4462723|PMID:20566846)
UniProt Ensembl RGD
PMID:20566846
GO_REF:0000024 GO_REF:0000107 MGI:4462723
NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
G
Ppt1
palmitoyl-protein thioesterase 1
involved_in
ISO ISS
(PMID:10737604), (PMID:11020216) PMID:8895569
RGD
PMID:10737604 PMID:11020216 PMID:8895569
RGD:8553248
NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048
G
Prdx2
peroxiredoxin 2
IMP
RGD
PMID:17663478
RGD:2291829
NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
G
Prdx3
peroxiredoxin 3
IMP
RGD
PMID:12887684
RGD:2290400
NCBI chr 1:260,001,642...260,014,064
Ensembl chr 1:260,001,637...260,014,111
G
Prkcg
protein kinase C, gamma
involved_in
IMP
PMID:15705736
UniProt
PMID:15705736
RGD:8553897
NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
G
Prkci
protein kinase C, iota
involved_in
ISO ISS
(PMID:10467349) GO_REF:0000024
RGD UniProt
PMID:10467349
GO_REF:0000024
NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352
G
Prkn
parkin RBR E3 ubiquitin protein ligase
acts_upstream_of_or_within involved_in
IMP IGI ISO ISS
PMID:20823226 (MGI:4365473|PMID:19591802), (MGI:5582177|PMID:12628165) (PMID:12628165), (PMID:22511790), (PMID:23985028) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:12628165 PMID:19591802 PMID:22511790 PMID:23985028 PMID:28761318 PMID:20823226 More...
GO_REF:0000024 MGI:4365473 MGI:5582177 , RGD:13432138 , RGD:8693409
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Psen1
presenilin 1
IMP
RGD
PMID:11895366
RGD:1304239
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Ptk2b
protein tyrosine kinase 2 beta
involved_in
IMP
PMID:17188509
Alzheimers_University_of_Toronto
PMID:17188509
RGD:8554817
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
G
Ptprz1
protein tyrosine phosphatase, receptor type Z1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:6294380|PMID:12573468) GO_REF:0000107
UniProt RGD Ensembl
PMID:12573468
GO_REF:0000024 GO_REF:0000107 MGI:6294380
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
G
Rad21
RAD21 cohesin complex component
IMP
RGD
PMID:33741460
RGD:243065262
NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817
G
Rasa1
RAS p21 protein activator 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 2:15,857,704...15,940,757
Ensembl chr 2:15,857,980...15,940,854
G
Retreg1
reticulophagy regulator 1
involved_in
ISO IBA IEA ISS
(PMID:26040720) GO_REF:0000033 GO_REF:0000118 (MGI:5646045|PMID:26040720) GO_REF:0000024
RGD GO_Central TreeGrafter
PMID:26040720
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5646045
NCBI chr 2:76,335,609...76,474,817
Ensembl chr 2:76,335,609...76,493,898
G
Rnu12
RNA, U12 small nuclear
involved_in
ISO
(MGI:6400894|PMID:25492806)
RGD
PMID:25492806
MGI:6400894
NCBI chr 7:114,303,546...114,303,696
Ensembl chr 7:114,303,546...114,303,696
G
Sct
secretin
acts_upstream_of_or_within
ISO
MGI:3815315 (MGI:4939559|PMID:21159798)
RGD
PMID:21159798
MGI:4939559
NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658
G
Sema3e
semaphorin 3E
involved_in
ISO
(PMID:25985275)
RGD
PMID:25985275
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Set
Set nuclear proto-oncogene
acts_upstream_of_or_within
ISO
UniProtKB:Q99490|UniProtKB:Q99538 (PMID:18374643)
RGD
PMID:18374643
NCBI chr 3:13,334,564...13,345,598
Ensembl chr 3:13,335,041...13,363,567
G
Sirt1
sirtuin 1
involved_in acts_upstream_of_or_within
IMP IEA ISO
GO_REF:0000107 MGI:88276 (MGI:5437773|PMID:22956852) PMID:29358553
Ensembl RGD
PMID:22956852 PMID:24755072 PMID:29358553
GO_REF:0000107 MGI:5437773 , RGD:10047112 , RGD:13838797
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
G
Six1
SIX homeobox 1
involved_in
ISO
(MGI:3689152|PMID:16938278)
RGD
PMID:16938278
MGI:3689152
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Six4
SIX homeobox 4
involved_in
ISO
(MGI:3689152|PMID:16938278)
RGD
PMID:16938278
MGI:3689152
NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992
G
Slc1a1
solute carrier family 1 member 1
involved_in
ISO
MGI:2655190 (MGI:6162808|PMID:29720605)
RGD
PMID:29720605
MGI:6162808
NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
G
Slc25a27
solute carrier family 25, member 27
acts_upstream_of_or_within
ISO
(MGI:5437773|PMID:22956852)
RGD
PMID:22956852
MGI:5437773
NCBI chr 9:17,306,898...17,333,942
Ensembl chr 9:17,307,023...17,332,731
G
Smo
smoothened, frizzled class receptor
IMP
RGD
PMID:20848190
RGD:12879463
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Snca
synuclein alpha
acts_upstream_of_or_within
IMP ISO
MGI:892995 (MGI:3690829|PMID:16269331)
RGD
PMID:16269331 PMID:17635667
MGI:3690829 , RGD:2291827
NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
G
Sncb
synuclein, beta
acts_upstream_of_or_within
ISO
MGI:892995 (MGI:3690829|PMID:16269331)
RGD
PMID:16269331
MGI:3690829
NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
G
Snx6
sorting nexin 6
involved_in
ISO
RNAcentral:URS00004E0808_9606 (PMID:27541017)
RGD
PMID:27541017
NCBI chr 6:72,230,950...72,274,157
Ensembl chr 6:72,229,870...72,315,911
G
Sod1
superoxide dismutase 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857872 (MGI:3700629|PMID:10464373)
UniProt RGD
PMID:10464373
GO_REF:0000024 MGI:3700629
NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
G
Sod2
superoxide dismutase 2
involved_in
ISO
(PMID:17251466)
RGD
PMID:17251466
NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
G
Star
steroidogenic acute regulatory protein
IMP
RGD
PMID:16579833
RGD:1600078
NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
G
Stxbp1
syntaxin binding protein 1
acts_upstream_of_or_within
ISO
MGI:2183278 (MGI:3588009|PMID:15255974)
RGD
PMID:15255974
MGI:3588009
NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
G
Syngap1
synaptic Ras GTPase activating protein 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3511175 (MGI:3590468|PMID:15733080) GO_REF:0000107
RGD Ensembl
PMID:15733080
GO_REF:0000107 MGI:3590468
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
G
Tert
telomerase reverse transcriptase
IMP
RGD
PMID:23968592
RGD:11038670
NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:104672 (MGI:5049826|PMID:21539825)
RGD
PMID:21539825
MGI:5049826
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Tfap2b
transcription factor AP-2 beta
acts_upstream_of_or_within
ISO
MGI:104671 (MGI:5049826|PMID:21539825)
RGD
PMID:21539825
MGI:5049826
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
G
Tfap2d
transcription factor AP-2 delta
acts_upstream_of_or_within
ISO
MGI:5296818 (MGI:5295521|PMID:21858141)
RGD
PMID:21858141
MGI:5295521
NCBI chr 9:21,680,577...21,744,840
Ensembl chr 9:21,680,577...21,740,728
G
Tgfb3
transforming growth factor, beta 3
acts_upstream_of_or_within
ISO
MGI:1857259 (MGI:3696537|PMID:17159989)
RGD
PMID:17159989
MGI:3696537
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Thap11
THAP domain containing 11
acts_upstream_of_or_within
ISO
MGI:3052237|MGI:3797582 (MGI:6507297|PMID:26876175)
RGD
PMID:26876175
MGI:6507297
NCBI chr19:33,746,977...33,748,794
Ensembl chr19:33,746,854...33,749,540
G
Tmbim4
transmembrane BAX inhibitor motif containing 4
involved_in
ISO
(MGI:6141516|PMID:24141020)
RGD
PMID:24141020
MGI:6141516
NCBI chr 7:55,718,690...55,733,277
Ensembl chr 7:55,718,699...55,742,773
G
Tox3
TOX high mobility group box family member 3
involved_in
ISO IEA ISS
(PMID:21172805) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:21172805
GO_REF:0000024 GO_REF:0000107
NCBI chr19:16,648,338...16,757,151
Ensembl chr19:16,648,342...16,757,148
G
Tp73
tumor protein p73
acts_upstream_of_or_within
ISO
(MGI:1860990|PMID:10894779) MGI:1859911 (MGI:1860990|PMID:10894779), (MGI:3574697|PMID:15483136), (MGI:3626124|PMID:12427836)
RGD
PMID:10894779 PMID:12427836 PMID:15483136
MGI:1860990 MGI:3574697 MGI:3626124
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Tyro3
TYRO3 protein tyrosine kinase
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:1347244 (MGI:3817816|PMID:18787040)
UniProt Ensembl RGD
PMID:18787040
GO_REF:0000024 GO_REF:0000107 MGI:3817816
NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142
G
Ube2v2
ubiquitin conjugating enzyme E2 V2
IMP
RGD
PMID:12750002
RGD:1299567
NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
G
Ucn
urocortin
IDA
RGD
PMID:11784785
RGD:70397
NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
G
Ucp2
uncoupling protein 2
acts_upstream_of_or_within
ISO
(MGI:5437773|PMID:22956852)
RGD
PMID:22956852
MGI:5437773
NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
G
Unc5b
unc-5 netrin receptor B
involved_in
ISO IEA
(PMID:18469807) GO_REF:0000107
RGD Ensembl
PMID:18469807
GO_REF:0000107
NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(MGI:5287519|PMID:21828096)
RGD
PMID:21828096
MGI:5287519
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Vegfb
vascular endothelial growth factor B
involved_in
ISO
(PMID:18259607)
RGD
PMID:18259607
NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
G
Vstm2l
V-set and transmembrane domain containing 2 like
involved_in
IDA ISO
PMID:21393573 (MGI:5693362|PMID:21393573) (PMID:21393573)
RGD
PMID:21393573 PMID:21393573
MGI:5693362 , RGD:14974247
NCBI chr 3:146,571,099...146,600,930
Ensembl chr 3:146,571,278...146,600,325
G
Wfs1
wolframin ER transmembrane glycoprotein
involved_in
ISO
(PMID:9771706), (PMID:9817917)
RGD
PMID:9771706 PMID:9817917
NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602
G
Xiap
X-linked inhibitor of apoptosis
IDA IMP
RGD
PMID:16336964 PMID:18485100
RGD:2314393 , RGD:2314399
NCBI chr X:120,890,537...120,938,413
Ensembl chr X:120,897,907...120,934,700
G
Xrcc2
X-ray repair cross complementing 2
acts_upstream_of_or_within
ISO
MGI:98834 (MGI:3652689|PMID:16777961)
RGD
PMID:16777961
MGI:3652689
NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
G
Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
MGI:1926771 (MGI:1913213|PMID:9875844)
RGD
PMID:9875844
MGI:1913213
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
G
Barhl1
BarH-like homeobox 1
acts_upstream_of_or_within
ISO
MGI:2181383 (MGI:2181080|PMID:12091321)
RGD
PMID:12091321
MGI:2181080
NCBI chr 3:12,241,327...12,248,649
Ensembl chr 3:12,241,327...12,248,649
G
Atf4
activating transcription factor 4
involved_in
IMP ISO
PMID:23392669 UniProtKB:Q9ES19 (PMID:23392669)
RGD
PMID:23392669 PMID:23392669
RGD:10047168
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
G
Ctnnb1
catenin beta 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5770063|PMID:21752258)
Ensembl RGD
PMID:21752258
GO_REF:0000107 MGI:5770063
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Fbxo7
F-box protein 7
acts_upstream_of involved_in
ISO
(PMID:26310625) (PMID:25029497)
RGD
PMID:25029497 PMID:26310625
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
G
Fzd1
frizzled class receptor 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5770063|PMID:21752258)
Ensembl RGD
PMID:21752258
GO_REF:0000107 MGI:5770063
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
ISO IEA
(PMID:24899725) GO_REF:0000107
RGD Ensembl
PMID:24899725
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Il10
interleukin 10
involved_in
ISO
ComplexPortal:CPX-1134 (MGI:5291547|PMID:21857966)
RGD
PMID:21857966
MGI:5291547
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
G
Nono
non-POU domain containing, octamer-binding
involved_in
ISO
(PMID:15790595)
RGD
PMID:15790595
NCBI chr X:66,554,131...66,571,992
Ensembl chr X:66,554,098...66,571,952
G
Park7
Parkinsonism associated deglycase
involved_in
ISS ISO
GO_REF:0000024 (MGI:5575789|PMID:24899725) (PMID:15790595), (PMID:16632486), (PMID:23743200)
ParkinsonsUK-UCL RGD
PMID:15790595 PMID:16632486 PMID:23743200 PMID:24899725
GO_REF:0000024 MGI:5575789
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(PMID:16632486)
RGD
PMID:16632486
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Prkn
parkin RBR E3 ubiquitin protein ligase
involved_in
ISO IEA IGI ISS
(PMID:17314283) GO_REF:0000107 PMID:23392669 (MGI:5543313|PMID:23858059) GO_REF:0000024
RGD Ensembl ParkinsonsUK-UCL
PMID:17314283 PMID:23858059 PMID:23392669
GO_REF:0000024 GO_REF:0000107 MGI:5543313 , RGD:10047168
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
G
Pycr1
pyrroline-5-carboxylate reductase 1
involved_in
ISO
(PMID:23743200)
RGD
PMID:23743200
NCBI chr10:105,917,732...105,922,658
Ensembl chr10:105,917,680...105,922,549
G
Wnt1
Wnt family member 1
involved_in
ISO
(MGI:5770063|PMID:21752258)
RGD
PMID:21752258
MGI:5770063
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
G
Tmbim6
transmembrane BAX inhibitor motif containing 6
acts_upstream_of_or_within
ISO
MGI:3052422 (MGI:3050914|PMID:15304216)
RGD
PMID:15304216
MGI:3050914
NCBI chr 7:130,527,313...130,542,567
Ensembl chr 7:130,527,316...130,543,633
G
Daxx
death-domain associated protein
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q99683 (PMID:15983381)
Ensembl RGD
PMID:15983381
GO_REF:0000107
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
G
Map3k5
mitogen-activated protein kinase kinase kinase 5
involved_in
ISO
UniProtKB:Q9UER7 (PMID:15983381)
RGD
PMID:15983381
NCBI chr 1:14,685,776...14,904,935
Ensembl chr 1:14,685,492...14,904,800
G
Barhl1
BarH-like homeobox 1
acts_upstream_of
ISO
MGI:2181383 (MGI:2181080|PMID:12091321)
RGD
PMID:12091321
MGI:2181080
NCBI chr 3:12,241,327...12,248,649
Ensembl chr 3:12,241,327...12,248,649
G
Tmtc4
transmembrane O-mannosyltransferase targeting cadherins 4
acts_upstream_of_or_within
ISO
MGI:5008116 (MGI:6270315|PMID:30188326)
RGD
PMID:30188326
MGI:6270315
NCBI chr15:100,000,157...100,056,573
Ensembl chr15:100,000,152...100,056,543
G
Usp53
ubiquitin specific peptidase 53
acts_upstream_of_or_within
ISO
MGI:3708452 (MGI:5703670|PMID:26609154)
RGD
PMID:26609154
MGI:5703670
NCBI chr 2:211,059,512...211,120,942
Ensembl chr 2:211,059,520...211,120,943
G
Lcn2
lipocalin 2
IDA
RGD
PMID:26004810
RGD:126790532
NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
G
Agrn
agrin
acts_upstream_of_or_within
ISO
MGI:1929777 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:1857429 (MGI:3580738|PMID:15944391), (MGI:3695831|PMID:17192424)
RGD
PMID:15944391 PMID:17192424
MGI:3580738 MGI:3695831
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Musk
muscle associated receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:1929066 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
G
Rapsn
receptor-associated protein of the synapse
acts_upstream_of_or_within
ISO
MGI:2148091 (MGI:2137500|PMID:11312299)
RGD
PMID:11312299
MGI:2137500
NCBI chr 3:77,015,073...77,024,378
Ensembl chr 3:76,983,471...77,024,373
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within
IMP ISO
MGI:2176222|MGI:3525886 (MGI:4833709|PMID:20823226)
RGD
PMID:20823226 PMID:18559370
MGI:4833709 , RGD:8693418
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:22717618
RGD:7245531
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Aifm1
apoptosis inducing factor, mitochondria associated 1
IMP
RGD
PMID:20177052
RGD:10047406
NCBI chr X:127,650,223...127,689,356
Ensembl chr X:127,650,226...127,689,256
G
Aimp2
aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
acts_upstream_of_or_within
IDA
PMID:20823226
MGI
PMID:20823226
RGD:8693409
NCBI chr12:10,701,194...10,710,772
Ensembl chr12:10,701,194...10,710,769
G
App
amyloid beta precursor protein
involved_in
ISO
(PMID:29371969) UniProtKB:P10909 (PMID:23164821)
RGD
PMID:23164821 PMID:29371969
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (MGI:3639051|PMID:16469766)
RGD
PMID:16469766
MGI:3639051
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Atf2
activating transcription factor 2
IMP
RGD
PMID:19255142
RGD:10047411
NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
G
Atf4
activating transcription factor 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:4879048|PMID:21159964)
UniProt RGD
PMID:21159964
GO_REF:0000024 MGI:4879048
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
G
Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
IMP ISO
MGI:1335098|MGI:99702 (MGI:1352316|PMID:10639175), (MGI:3652689|PMID:16777961)
RGD
PMID:10639175 PMID:16777961 PMID:20502937
MGI:1352316 MGI:3652689 , RGD:10053605
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
G
Bace1
beta-secretase 1
involved_in
ISO
UniProtKB:P05067-PRO_0000000092 (PMID:29371969)
RGD
PMID:29371969
NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
G
Bag1
BAG cochaperone 1
acts_upstream_of_or_within
ISO
(MGI:4819895|PMID:20516211)
RGD
PMID:20516211
MGI:4819895
NCBI chr 5:56,068,494...56,081,075
Ensembl chr 5:56,068,494...56,081,075
G
Bax
BCL2 associated X, apoptosis regulator
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:107202|MGI:1857429|MGI:2158306|MGI:88139|MGI:95813|MGI:95824 (MGI:1196093|PMID:9454852), (MGI:1277631|PMID:9699561), (MGI:1352316|PMID:10639175), (MGI:1355025|PMID:10744634), (MGI:1860799|PMID:10762311), (MGI:1861056|PMID:10884318), (MGI:1929535|PMID:11150333), (MGI:1933803|PMID:11146002), (MGI:3531599|PMID:15590937), (MGI:3586962|PMID:16103918), (MGI:3590457|PMID:15869495), (MGI:3691384|PMID:10683286), (MGI:3692043|PMID:14502238), (MGI:3694443|PMID:15947791), (MGI:3695831|PMID:17192424), (MGI:82821|PMID:8816704), (MGI:86927|PMID:9096145) (MGI:5796062|PMID:27098698) (PMID:15637643)
UniProt RGD
PMID:8816704 PMID:9096145 PMID:9454852 PMID:9699561 PMID:10639175 PMID:10683286 PMID:10744634 PMID:10762311 PMID:10884318 PMID:11146002 PMID:11150333 PMID:14502238 PMID:15590937 PMID:15637643 PMID:15869495 PMID:15947791 PMID:16103918 PMID:17192424 PMID:27098698 More...
GO_REF:0000024 MGI:1196093 MGI:1277631 MGI:1352316 MGI:1355025 MGI:1860799 MGI:1861056 MGI:1929535 MGI:1933803 MGI:3531599 MGI:3586962 MGI:3590457 MGI:3691384 MGI:3692043 MGI:3694443 MGI:3695831 MGI:5796062 MGI:82821 MGI:86927
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bbc3
Bcl-2 binding component 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:4879048|PMID:21159964), (MGI:5448480|PMID:22761832)
UniProt Ensembl RGD
PMID:21159964 PMID:22761832
GO_REF:0000024 GO_REF:0000107 MGI:4879048 MGI:5448480
NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509
G
Bcl2l11
Bcl2-like 11
acts_upstream_of_or_within
ISO
(MGI:3057092|PMID:15231831)
RGD
PMID:15231831
MGI:3057092
NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
G
Bdnf
brain-derived neurotrophic factor
IMP
RGD
PMID:11050383
RGD:8655586
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Casp12
caspase 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
G
Casp14
caspase 14
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:10,929,759...10,932,591
Ensembl chr 7:10,926,725...10,933,405
G
Casp2
caspase 2
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:12067235
GO_REF:0000033, RGD:4107080
NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379
G
Casp3
caspase 3
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:18404518
GO_REF:0000033, RGD:2293320
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
G
Casp4
caspase 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:2,599,017...2,635,097
Ensembl chr 8:2,598,876...2,635,092
G
Casp6
caspase 6
involved_in
IMP IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:11433428
GO_REF:0000033 GO_REF:0000118, RGD:2301329
NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
G
Casp7
caspase 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:255,437,438...255,476,737
Ensembl chr 1:255,437,172...255,476,729
G
Casp8
caspase 8
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:10197541
GO_REF:0000033, RGD:734695
NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
G
Casp9
caspase 9
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2158755|MGI:99702 (MGI:1929535|PMID:11150333), (MGI:3691523|PMID:11092819) GO_REF:0000033
RGD GO_Central
PMID:11092819 PMID:11150333
GO_REF:0000033 MGI:1929535 MGI:3691523
NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
G
Casp9_v1
caspase-9-carboxyl-terminal divergent
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
Ccl3
C-C motif chemokine ligand 3
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:P20060 (MGI:3044466|PMID:15155903)
UniProt RGD
PMID:15155903
GO_REF:0000024 MGI:3044466
NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
G
Ccr5
C-C motif chemokine receptor 5
IMP
RGD
PMID:19034668
RGD:4890424
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
G
Cdc34
cell division cycle 34, ubiqiutin conjugating enzyme
IMP
RGD
PMID:12401444
RGD:2316159
NCBI chr 7:10,017,588...10,023,586
Ensembl chr 7:10,017,588...10,023,186
G
Cdc42
cell division cycle 42
IMP
RGD
PMID:17161586
RGD:2298583
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
G
Cdk5
cyclin-dependent kinase 5
involved_in
IDA
PMID:16192386
UniProt
PMID:16192386
RGD:8553388
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
IDA
PMID:16192386
UniProt
PMID:16192386
RGD:8553388
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cflar
CASP8 and FADD-like apoptosis regulator
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
G
Ctnnb1
catenin beta 1
involved_in
ISO IEA
(PMID:19591802) GO_REF:0000107
RGD Ensembl
PMID:19591802
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ddit3
DNA-damage inducible transcript 3
involved_in
ISS ISO IMP
GO_REF:0000024 (MGI:4879048|PMID:21159964), (MGI:5621266|PMID:16135078) PMID:28694771
UniProt RGD
PMID:16135078 PMID:21159964 PMID:28694771
GO_REF:0000024 MGI:4879048 MGI:5621266 , RGD:14390049
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
G
Egln1
egl-9 family hypoxia-inducible factor 1
IDA
RGD
PMID:10386996
RGD:11252089
NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
G
Egr1
early growth response 1
IMP
RGD
PMID:21451041
RGD:5131648
NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766
G
Epha7
Eph receptor A7
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3582020|PMID:15902206)
UniProt Ensembl RGD
PMID:15902206
GO_REF:0000024 GO_REF:0000107 MGI:3582020
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Fas
Fas cell surface death receptor
IMP
RGD
PMID:23940767
RGD:8663468
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Faslg
Fas ligand
IMP
RGD
PMID:9858598
RGD:2315725
NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:2135676 (MGI:3529735|PMID:15708559)
RGD
PMID:15708559
MGI:3529735
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Fis1
fission, mitochondrial 1
IMP
RGD
PMID:18940801
RGD:2314538
NCBI chr12:19,708,560...19,723,392
Ensembl chr12:19,708,558...19,723,377
G
Foxo3
forkhead box O3
involved_in
ISO
(PMID:10102273)
RGD
PMID:10102273
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
G
Gch1
GTP cyclohydrolase 1
IMP
RGD
PMID:31210282
RGD:401700382
NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
G
Grik2
glutamate ionotropic receptor kainate type subunit 2
IMP
RGD
PMID:17639597
RGD:2316528
NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
G
Grik5
glutamate ionotropic receptor kainate type subunit 5
IMP
RGD
PMID:17639597
RGD:2316528
NCBI chr 1:80,605,878...80,667,896
Ensembl chr 1:80,605,892...80,667,125
G
Grn
granulin precursor
involved_in
ISS ISO
GO_REF:0000024 (MGI:5440302|PMID:23041626)
UniProt RGD
PMID:23041626
GO_REF:0000024 MGI:5440302
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
G
Gsk3a
glycogen synthase kinase 3 alpha
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:20841359
GO_REF:0000033, RGD:10401822
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:16765055 PMID:20841359
GO_REF:0000033, RGD:10045555 , RGD:10401822
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hdac3
histone deacetylase 3
IMP
RGD
PMID:21289184
RGD:9590182
NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
G
Hdac4
histone deacetylase 4
IMP
RGD
PMID:23925573
RGD:9681446
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
G
Hrk
harakiri, BCL2 interacting protein
IMP
RGD
PMID:17428807
RGD:2290488
NCBI chr12:38,387,484...38,409,652
G
Htr2a
5-hydroxytryptamine receptor 2A
IMP
RGD
PMID:16504407
RGD:1624391
NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
G
Il18
interleukin 18
IMP
RGD
PMID:17188500
RGD:2315917
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il1b
interleukin 1 beta
IMP
RGD
PMID:23262920
RGD:10450589
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Itga1
integrin subunit alpha 1
IMP
hippocampal neurons in response to beta-amyloid
RGD
PMID:14991844
RGD:2302385
NCBI chr 2:46,646,125...46,812,237
Ensembl chr 2:46,653,193...46,812,238
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
IMP
RGD
PMID:15664113 PMID:19255142 PMID:12514131
RGD:2290487 , RGD:10047411 , RGD:2293340
NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
G
Kcnma1
potassium calcium-activated channel subfamily M alpha 1
IMP
RGD
PMID:23653329
RGD:10412031
NCBI chr15:302,480...1,007,675
Ensembl chr15:302,214...1,001,198
G
Lcn2
lipocalin 2
IMP
RGD
PMID:30574656
RGD:126781752
NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
G
Map2k4
mitogen activated protein kinase kinase 4
IMP
RGD
PMID:12514131
RGD:2293340
NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993
G
Map2k7
mitogen activated protein kinase kinase 7
IMP
RGD
PMID:12514131
RGD:2293340
NCBI chr12:2,591,312...2,600,534
Ensembl chr12:2,591,219...2,604,222
G
Map3k11
mitogen-activated protein kinase kinase kinase 11
IMP
RGD
PMID:11416147
RGD:2302272
NCBI chr 1:202,975,353...202,988,655
Ensembl chr 1:202,975,353...202,988,652
G
Mapk8
mitogen-activated protein kinase 8
IMP
RGD
PMID:12534344
RGD:10412678
NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
G
Mir125b1
microRNA 125b-1
involved_in
ISO
(PMID:28947385)
RGD
PMID:28947385
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir210
microRNA 210
IMP
RGD
PMID:24089674
RGD:155882465
NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
G
Mir96
microRNA 96
IDA
RGD
PMID:25419419
RGD:11553931
NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
G
Mir98
microRNA 98
involved_in
ISO
(PMID:27541017)
RGD
PMID:27541017
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:19474323
RGD:10041000
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myb
MYB proto-oncogene, transcription factor
IMP
RGD
PMID:15470138
RGD:11532747
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
G
Mybl2
MYB proto-oncogene like 2
IMP
RGD
PMID:15470138
RGD:11532747
NCBI chr 3:151,705,254...151,733,714
Ensembl chr 3:151,705,288...151,733,708
G
Ncf2
neutrophil cytosolic factor 2
IMP
RGD
PMID:18675340
RGD:2314432
NCBI chr13:64,955,622...64,986,144
Ensembl chr13:64,955,503...64,986,277
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1857444|MGI:2176055|MGI:2176057|MGI:96224|MGI:96680 (MGI:1861510|PMID:10845775), (MGI:1932841|PMID:11297510), (MGI:1933752|PMID:7671302) GO_REF:0000024
Ensembl RGD HGNC-UCL
PMID:7671302 PMID:10845775 PMID:11297510
GO_REF:0000024 GO_REF:0000107 MGI:1861510 MGI:1932841 MGI:1933752
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nfatc4
nuclear factor of activated T-cells 4
acts_upstream_of_or_within
ISO
(MGI:3778102|PMID:18354019)
RGD
PMID:18354019
MGI:3778102
NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
G
Nox1
NADPH oxidase 1
IMP
RGD
PMID:25617620
RGD:329955357
NCBI chr X:97,279,058...97,332,291
Ensembl chr X:97,279,056...97,302,236
G
Nqo1
NAD(P)H quinone dehydrogenase 1
IMP
RGD
PMID:12603827
RGD:727509
NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
G
Nqo2
N-ribosyldihydronicotinamide:quinone dehydrogenase 2
IMP
RGD
PMID:20861374
RGD:11073700
NCBI chr17:30,909,482...30,938,725
Ensembl chr17:30,909,187...30,938,320
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:99702 (MGI:1355025|PMID:10744634) GO_REF:0000107
RGD Ensembl
PMID:10744634
GO_REF:0000107 MGI:1355025
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
G
Nupr1
nuclear protein 1, transcriptional regulator
involved_in
IMP
PMID:28694771
UniProt
PMID:28694771
RGD:14390049
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
G
Optn
optineurin
IMP
RGD
PMID:25385380
RGD:13434903
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
G
Pak3
p21 (RAC1) activated kinase 3
IMP
RGD
PMID:12890786
RGD:7775030
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Pawr
pro-apoptotic WT1 regulator
IMP
RGD
PMID:11323519
RGD:9835381
NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
G
Pcsk9
proprotein convertase subtilisin/kexin type 9
involved_in
ISO IDA
(PMID:17051583)
RGD
PMID:17051583 PMID:17051583
RGD:1599462
NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
G
Phb1
prohibitin 1
acts_upstream_of
ISO
UniProtKB:Q9Y3I1 (PMID:26310625)
RGD
PMID:26310625
NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
G
Pin1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
IMP
RGD
PMID:16504941
RGD:8693577
NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
G
Pitx3
paired-like homeodomain 3
IDA
RGD
PMID:18385323
RGD:11535083
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
G
Pmaip1
phorbol-12-myristate-13-acetate-induced protein 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2678372 (MGI:3577145|PMID:15703398) GO_REF:0000107
RGD Ensembl
PMID:15703398
GO_REF:0000107 MGI:3577145
NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429
G
Pou4f1
POU class 4 homeobox 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1314872 (MGI:3056843|PMID:15492043) GO_REF:0000107
RGD Ensembl
PMID:15492043
GO_REF:0000107 MGI:3056843
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Ppp2r2b
protein phosphatase 2, regulatory subunit B, beta
involved_in
IDA
PMID:12716901
RGD UniProt
PMID:18940801 PMID:12716901
RGD:2314538 , RGD:2314541
NCBI chr18:34,653,716...35,080,889
Ensembl chr18:34,653,721...35,081,025
G
Prnp
prion protein
involved_in
ISO
(PMID:20564047)
RGD
PMID:20564047
NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
G
Ptprf
protein tyrosine phosphatase, receptor type, F
IMP
RGD
PMID:10699984
RGD:1642748
NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
G
Rhoa
ras homolog family member A
IMP
RGD
PMID:17425560
RGD:1642961
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Ripk1
receptor interacting serine/threonine kinase 1
IMP
RGD
PMID:32308116
RGD:156420143
NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
G
Srpk2
SRSF protein kinase 2
involved_in
ISO
(MGI:5009368|PMID:19592491)
RGD
PMID:19592491
MGI:5009368
NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
G
St8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
IDA
RGD
PMID:14635225
RGD:27372877
NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
G
Tfap2a
transcription factor AP-2 alpha
involved_in
ISO
(PMID:20607706)
RGD
PMID:20607706
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Tfap2b
transcription factor AP-2 beta
involved_in
ISS ISO
GO_REF:0000024 (PMID:20607706)
UniProt RGD
PMID:20607706
GO_REF:0000024
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:16227582)
AgBase RGD
PMID:16227582
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tnf
tumor necrosis factor
involved_in
IMP ISO
(MGI:6274957|PMID:22950459)
RGD
PMID:22950459 PMID:14999074 PMID:23262920
MGI:6274957 , RGD:1580294 , RGD:10450589
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf1a
TNF receptor superfamily member 1A
IMP
RGD
PMID:22522145
RGD:8661759
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
G
Tp53
tumor protein p53
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1335098|MGI:1857263|MGI:1857590|MGI:1927345 (MGI:1203920|PMID:9608530), (MGI:1860400|PMID:10911993), (MGI:1860990|PMID:10894779), (MGI:1929535|PMID:11150333), (MGI:3574697|PMID:15483136), (MGI:3652689|PMID:16777961), (MGI:3691523|PMID:11092819) GO_REF:0000107
RGD Ensembl
PMID:9608530 PMID:10894779 PMID:10911993 PMID:11092819 PMID:11150333 PMID:15483136 PMID:16777961 More...
GO_REF:0000107 MGI:1203920 MGI:1860400 MGI:1860990 MGI:1929535 MGI:3574697 MGI:3652689 MGI:3691523
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Traf7
TNF receptor associated factor 7
IMP
RGD
PMID:30100091
RGD:151356968
NCBI chr10:13,533,570...13,552,290
Ensembl chr10:13,533,570...13,552,203
G
Ube2m
ubiquitin-conjugating enzyme E2M
IMP
RGD
PMID:14557245
RGD:2302388
NCBI chr 1:73,662,576...73,666,113
Ensembl chr 1:73,662,576...73,666,026
G
Src
SRC proto-oncogene, non-receptor tyrosine kinase
ISO
RGD
(All species) (All species)
NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
G
Tp53
tumor protein p53
ISO
RGD
(All species) (All species)
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Adcy10
adenylate cyclase 10
IMP
RGD
PMID:28386847
RGD:329337357
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
G
Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(PMID:23858059) (MGI:5543313|PMID:23858059)
RGD
PMID:23858059
MGI:5543313
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
G
Mcl1
MCL1 apoptosis regulator, BCL2 family member
involved_in
ISO
UniProtKB:Q9WVS6 (PMID:23858059) (MGI:5543313|PMID:23858059)
RGD
PMID:23858059
MGI:5543313
NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303
G
Mmp2
matrix metallopeptidase 2
IMP
RGD
PMID:27614125
RGD:329961568
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Ralbp1
ralA binding protein 1
IMP
RGD
PMID:23788031
RGD:12904719
NCBI chr 9:105,456,425...105,493,235
Ensembl chr 9:105,456,425...105,492,707
G
App
amyloid beta precursor protein
involved_in
ISO
ComplexPortal:CPX-1134 (PMID:23921129)
RGD
PMID:23921129
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Fcgr2b
Fc gamma receptor 2B
involved_in
IMP ISO
PMID:23921129 (MGI:5514474|PMID:23921129)
RGD
PMID:23921129 PMID:23921129
MGI:5514474 , RGD:12910988
NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
G
Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(MGI:6458378|PMID:30684126)
RGD
PMID:30684126
MGI:6458378
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
G
Kcnb1
potassium voltage-gated channel subfamily B member 1
involved_in
IDA
PMID:19077057
UniProt
PMID:19077057
RGD:10047372
NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
G
Map2k7
mitogen activated protein kinase kinase 7
acts_upstream_of_or_within involved_in
ISO IEA
MGI:4948950 (MGI:5605640|PMID:25100604) GO_REF:0000107
RGD Ensembl
PMID:25100604
GO_REF:0000107 MGI:5605640
NCBI chr12:2,591,312...2,600,534
Ensembl chr12:2,591,219...2,604,222
G
Mir124-1
microRNA 124-1
acts_upstream_of_or_within
ISO
MGI:5307015|MGI:5307017 (MGI:5303045|PMID:21857657)
RGD
PMID:21857657
MGI:5303045
NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
G
Akt1s1
AKT1 substrate 1
involved_in
ISO
(MGI:3693378|PMID:14973226)
RGD
PMID:14973226
MGI:3693378
NCBI chr 1:95,333,186...95,339,678
Ensembl chr 1:95,332,898...95,339,677
G
Bax
BCL2 associated X, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:1857429 (MGI:3821405|PMID:19029045)
RGD
PMID:19029045
MGI:3821405
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
(MGI:3621592|PMID:16516892)
RGD
PMID:16516892
MGI:3621592
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Egln2
egl-9 family hypoxia-inducible factor 2
involved_in
ISO ISS
(PMID:19587290) GO_REF:0000024
RGD UniProt
PMID:19587290
GO_REF:0000024
NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751
G
Egln3
egl-9 family hypoxia-inducible factor 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3794960|PMID:18332118)
UniProt RGD
PMID:18332118
GO_REF:0000024 MGI:3794960
NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766
G
Egr1
early growth response 1
involved_in
IGI
PMID:23164821
ARUK-UCL
PMID:23164821
RGD:12903240
NCBI chr18:26,462,967...26,466,766
Ensembl chr18:26,462,981...26,466,766
G
Faim2
Fas apoptotic inhibitory molecule 2
involved_in
ISO ISS
(PMID:17635665) (MGI:5295128|PMID:21957071), (MGI:5315338|PMID:17635665) GO_REF:0000024
RGD UniProt
PMID:17635665 PMID:21957071
GO_REF:0000024 MGI:5295128 MGI:5315338
NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168
G
G6pd
glucose-6-phosphate dehydrogenase
IDA
RGD
PMID:12414804
RGD:632733
NCBI chr X:152,201,081...152,220,863
Ensembl chr X:152,201,098...152,220,801
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:3696958 (MGI:4821481|PMID:20702712)
RGD
PMID:20702712
MGI:4821481
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Grid2
glutamate ionotropic receptor delta type subunit 2
acts_upstream_of_or_within
ISO
MGI:1857337|MGI:99702 (MGI:1861056|PMID:10884318)
RGD
PMID:10884318
MGI:1861056
NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355
G
Grin1
glutamate ionotropic receptor NMDA type subunit 1
acts_upstream_of_or_within
ISO
MGI:1928279|MGI:95815 (MGI:1344923|PMID:10479699), (MGI:3655891|PMID:16906136)
RGD
PMID:10479699 PMID:16906136
MGI:1344923 MGI:3655891
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
G
Grm4
glutamate metabotropic receptor 4
involved_in
NAS
PMID:16178733
UniProt
PMID:16178733
RGD:8554134
NCBI chr20:5,484,172...5,572,821
Ensembl chr20:5,481,124...5,572,821
G
Htt
huntingtin
involved_in
ISO
(MGI:5293262|PMID:21768291)
RGD
PMID:21768291
MGI:5293262
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Kcnip3
potassium voltage-gated channel interacting protein 3
acts_upstream_of_or_within
ISO
(MGI:3697749|PMID:17189291)
RGD
PMID:17189291
MGI:3697749
NCBI chr 3:114,677,027...114,742,923
Ensembl chr 3:114,677,030...114,743,556
G
Kif14
kinesin family member 14
involved_in
ISO
(MGI:5605219|PMID:24931760)
RGD
PMID:24931760
MGI:5605219
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5559663|PMID:22496871)
UniProt RGD
PMID:22496871
GO_REF:0000024 MGI:5559663
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Nae1
NEDD8 activating enzyme E1 subunit 1
involved_in
ISO IEA
(PMID:10722740) GO_REF:0000107
RGD Ensembl
PMID:10722740
GO_REF:0000107
NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371
G
Npm1
nucleophosmin 1
IMP
RGD
PMID:15893727
RGD:1600871
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
G
Nsmf
NMDA receptor synaptonuclear signaling and neuronal migration factor
involved_in
IMP
PMID:18303947
UniProt
PMID:18303947
RGD:8553324
NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614
G
Ntf3
neurotrophin 3
acts_upstream_of_or_within
ISO
(MGI:3621592|PMID:16516892)
RGD
PMID:16516892
MGI:3621592
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Park7
Parkinsonism associated deglycase
involved_in
ISS ISO
GO_REF:0000024 (PMID:18711745), (PMID:20304780)
UniProt RGD
PMID:18711745 PMID:20304780
GO_REF:0000024
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
G
Pcsk9
proprotein convertase subtilisin/kexin type 9
involved_in
ISS ISO
GO_REF:0000024 (MGI:5431198|PMID:22481440)
UniProt RGD
PMID:22481440
GO_REF:0000024 MGI:5431198
NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
G
Pink1
PTEN induced kinase 1
involved_in
ISO
(MGI:5431185|PMID:22511790)
RGD
PMID:22511790
MGI:5431185
NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
G
Ptpn5
protein tyrosine phosphatase, non-receptor type 5
IMP
RGD
PMID:19625523
RGD:9835004
NCBI chr 1:97,620,638...97,681,186
Ensembl chr 1:97,620,642...97,679,882
G
Sarm1
sterile alpha and TIR motif containing 1
acts_upstream_of_or_within
ISO
MGI:3765956 (MGI:3760489|PMID:17724133)
RGD
PMID:17724133
MGI:3760489
NCBI chr10:63,369,456...63,393,016
Ensembl chr10:63,369,456...63,392,822
G
Sigmar1
sigma non-opioid intracellular receptor 1
involved_in
ISO ISS
(PMID:21842496) GO_REF:0000024
RGD UniProt
PMID:21842496
GO_REF:0000024
NCBI chr 5:56,904,155...56,907,012
Ensembl chr 5:56,904,159...56,907,017
G
Snca
synuclein alpha
NOT|acts_upstream_of_or_within
ISO
MGI:2429773 (MGI:3603712|PMID:15380020)
RGD
PMID:15380020
MGI:3603712
NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
G
Snrk
SNF related kinase
involved_in
TAS
PMID:10930554
UniProt
PMID:10930554
RGD:8553371
NCBI chr 8:121,779,704...121,833,949
Ensembl chr 8:121,793,302...121,832,323
G
Tp53
tumor protein p53
acts_upstream_of_or_within
ISO
MGI:1336991 (MGI:3574697|PMID:15483136)
RGD
PMID:15483136
MGI:3574697
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Tp73
tumor protein p73
acts_upstream_of_or_within
ISO
MGI:98834 (MGI:3574697|PMID:15483136)
RGD
PMID:15483136
MGI:3574697
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Trim2
tripartite motif-containing 2
involved_in
ISS ISO IMP
GO_REF:0000024 (MGI:3813391|PMID:18687884) PMID:21478148
UniProt RGD
PMID:18687884 PMID:21478148
GO_REF:0000024 MGI:3813391 , RGD:8554586
NCBI chr 2:169,500,628...169,652,855
Ensembl chr 2:169,500,634...169,652,927
G
Ubb
ubiquitin B
acts_upstream_of_or_within
ISO
(PMID:17571083)
RGD
PMID:17571083
NCBI chr10:47,247,630...47,249,335
Ensembl chr10:47,245,637...47,249,333
G
Park7
Parkinsonism associated deglycase
involved_in
ISO
(PMID:15983381)
RGD
PMID:15983381
NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
G
Parp1
poly (ADP-ribose) polymerase 1
IMP
RGD
PMID:17347665
RGD:10414071
NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
G
Prodh
proline dehydrogenase
involved_in
ISO
(PMID:23743200)
RGD
PMID:23743200
NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305
G
Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(MGI:6458378|PMID:30684126)
RGD
PMID:30684126
MGI:6458378
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
G
Dio3
iodothyronine deiodinase 3
acts_upstream_of_or_within
ISO
(MGI:4441081|PMID:20203194)
RGD
PMID:20203194
MGI:4441081
NCBI chr 6:129,285,747...129,287,608
Ensembl chr 6:129,285,749...129,286,660
G
Thrb
thyroid hormone receptor beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4441081|PMID:20203194)
Ensembl RGD
PMID:20203194
GO_REF:0000107 MGI:4441081
NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
G
Akt2
AKT serine/threonine kinase 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2158456 (MGI:3695811|PMID:17202487) GO_REF:0000107
RGD Ensembl
PMID:17202487
GO_REF:0000107 MGI:3695811
NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
G
Cln8
CLN8, transmembrane ER and ERGIC protein
acts_upstream_of
ISO
MGI:1856959 (MGI:3695117|PMID:15565184)
RGD
PMID:15565184
MGI:3695117
NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
G
Grk1
G protein-coupled receptor kinase 1
acts_upstream_of
ISO
MGI:2668595 (MGI:1334014|PMID:10097103)
RGD
PMID:10097103
MGI:1334014
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all