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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of spindle orientation
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Accession:GO:0051294 term browser browse the term
Definition:Any process that set the alignment of spindle relative to other cellular structures.
Synonyms:exact_synonym: orienting of spindle;   spindle orientation



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establishment of spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 acts_upstream_of_or_within IMP
IDA
IGI
(PMID:21822276) MGI PMID:21822276 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476
JBrowse link
G KIF25 kinesin family member 25 involved_in IDA (PMID:28263957) UniProt PMID:28263957 NCBI chr 6:167,997,671...168,045,106
Ensembl chr 6:167,996,241...168,045,091
JBrowse link
G LLGL1 LLGL scribble cell polarity complex component 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:18,225,593...18,244,875
Ensembl chr17:18,225,635...18,244,875
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:75,525,080...75,575,209
Ensembl chr17:75,525,080...75,575,209
JBrowse link
G MAP4 microtubule associated protein 4 acts_upstream_of_or_within IGI
IMP
(PMID:21822276) MGI PMID:21822276 NCBI chr 3:47,850,695...48,089,272
Ensembl chr 3:47,850,690...48,089,272
JBrowse link
G SPAG5 sperm associated antigen 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299957|PMID:22031545) MGI
Ensembl
PMID:22031545 GO_REF:0000107 MGI:5299957 NCBI chr17:28,577,574...28,599,025
Ensembl chr17:28,577,565...28,599,025
JBrowse link
establishment of meiotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MOS MOS proto-oncogene, serine/threonine kinase involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,112,942...56,113,982
Ensembl chr 8:56,112,942...56,113,982
JBrowse link
establishment of mitotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:56,110,935...56,517,016
Ensembl chr17:55,882,301...56,517,016
JBrowse link
G ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (MGI:4457234|PMID:19448628) UniProt PMID:19448628 MGI:4457234 NCBI chr 1:155,946,851...155,991,262
Ensembl chr 1:155,946,851...156,007,070
JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IMP (PMID:28394342) UniProt PMID:28394342 NCBI chr10:125,823,546...125,853,695
Ensembl chr10:125,823,546...125,853,695
JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 involved_in ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 9:120,388,875...120,580,167
Ensembl chr 9:120,388,869...120,580,170
JBrowse link
G CENPA centromere protein A involved_in IMP (PMID:19468067) UniProt PMID:19468067 NCBI chr 2:26,786,056...26,794,589
Ensembl chr 2:26,764,289...26,801,067
JBrowse link
G DCTN1 dynactin subunit 1 involved_in IMP
IBA
(PMID:22327364)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:22327364 NCBI chr 2:74,361,155...74,391,866
Ensembl chr 2:74,361,154...74,392,087
JBrowse link
G DYNLT1 dynein light chain Tctex-type 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:158,636,474...158,644,743
Ensembl chr 6:158,636,474...158,644,743
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) MGI PMID:21385765 MGI:4950299 NCBI chr 8:71,197,433...71,548,104
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:171,861,549...172,006,638
Ensembl chr 5:171,861,549...172,006,873
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G GJA1 gap junction protein alpha 1 involved_in IMP (PMID:30992345) ARUK-UCL PMID:30992345 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GPSM2 G protein signaling modulator 2 involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:22327364), (PMID:23870127)
(MGI:4950299|PMID:21385765)
UniProt
MGI
PMID:21385765 PMID:22327364 PMID:23870127 MGI:4950299 NCBI chr 1:108,875,350...108,934,545
Ensembl chr 1:108,875,350...108,934,545
JBrowse link
G HTT huntingtin involved_in IMP (PMID:20696378) UniProt PMID:20696378 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,363...3,243,957
JBrowse link
G INSC INSC spindle orientation adaptor protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4950299|PMID:21385765)
GO_Central
MGI
PMID:21385765 PMID:21873635 MGI:4950299 NCBI chr11:15,111,416...15,269,675
Ensembl chr11:15,112,424...15,247,208
JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IMP (PMID:30992345) ARUK-UCL PMID:30992345 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G MAD2L1 mitotic arrest deficient 2 like 1 involved_in IMP (PMID:23509069) UniProt PMID:23509069 NCBI chr 4:120,055,623...120,066,848
Ensembl chr 4:120,055,623...120,066,858
JBrowse link
G MCPH1 microcephalin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5306866|PMID:21947081) Ensembl
MGI
PMID:21947081 GO_REF:0000107 MGI:5306866 NCBI chr 8:6,406,615...6,648,508
Ensembl chr 8:6,406,592...6,648,508
JBrowse link
G MISP mitotic spindle positioning involved_in IMP (PMID:23509069), (PMID:23574715) UniProt PMID:23509069 PMID:23574715 NCBI chr19:748,413...764,318
Ensembl chr19:751,112...764,318
JBrowse link
G NDC80 NDC80 kinetochore complex component involved_in IMP (PMID:19468067) UniProt PMID:19468067 NCBI chr18:2,571,557...2,616,635
Ensembl chr18:2,571,557...2,616,635
JBrowse link
G NDE1 nudE neurodevelopment protein 1 involved_in IBA
IMP
(PMID:21873635)
(PMID:19468067)
GO_Central
UniProt
PMID:19468067 PMID:21873635 NCBI chr16:15,643,267...15,726,353
Ensembl chr16:15,643,267...15,734,691
JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:8,435,884...8,472,744
Ensembl chr17:8,413,131...8,490,411
JBrowse link
G NSFL1C NSFL1 cofactor involved_in IGI (PMID:23649807) UniProt PMID:23649807 NCBI chr20:1,442,166...1,467,793
Ensembl chr20:1,442,162...1,473,842
JBrowse link
G NUMA1 nuclear mitotic apparatus protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IDA
IMP
IBA
(MGI:4950299|PMID:21385765)
(PMID:21816348)
(PMID:24996901), (PMID:26765568)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:21385765 PMID:21816348 PMID:21873635 PMID:24996901 PMID:26765568 GO_REF:0000024 MGI:4950299 NCBI chr11:72,002,864...72,080,686
Ensembl chr11:72,002,864...72,080,693
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IMP
IBA
IEA
(PMID:11056532)
(PMID:21873635)
UniProt
GO_Central
PMID:11056532 PMID:21873635 GO_REF:0000104 NCBI chr17:2,593,210...2,685,617
Ensembl chr17:2,593,210...2,685,615
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5299957|PMID:22031545) Ensembl
MGI
PMID:22031545 GO_REF:0000107 MGI:5299957 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:51,614,685...52,087,625
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G PLK1 polo like kinase 1 involved_in IDA (PMID:23509069) UniProt PMID:23509069 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367
JBrowse link
G SAPCD2 suppressor APC domain containing 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:137,062,127...137,070,559
Ensembl chr 9:137,062,127...137,070,557
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 involved_in IBA
IMP
(PMID:21873635)
(PMID:19468067)
GO_Central
UniProt
PMID:19468067 PMID:21873635 NCBI chr 5:169,583,661...169,604,778
Ensembl chr 5:169,583,636...169,604,778
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G UBXN2B UBX domain protein 2B involved_in IGI (PMID:23649807) UniProt PMID:23649807 NCBI chr 8:58,411,361...58,451,501
Ensembl chr 8:58,411,359...58,451,501
JBrowse link
G ZW10 zw10 kinetochore protein involved_in IMP (PMID:19468067) UniProt PMID:19468067 NCBI chr11:113,733,183...113,773,699
Ensembl chr11:113,733,187...113,773,735
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    cellular process 17460
      establishment or maintenance of cell polarity 248
        establishment of cell polarity 158
          establishment of spindle orientation 40
            establishment of meiotic spindle orientation 1
            establishment of mitotic spindle orientation + 33
Path 2
Term Annotations click to browse term
  biological_process 18539
    cellular process 17460
      cellular component organization or biogenesis 6721
        cellular component organization 6526
          organelle organization 3985
            cytoskeleton organization 1541
              microtubule cytoskeleton organization 677
                establishment of spindle localization 54
                  establishment of spindle orientation 40
                    establishment of meiotic spindle orientation 1
                    establishment of mitotic spindle orientation + 33
paths to the root