Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of spindle orientation
go back to main search page
Accession:GO:0051294 term browser browse the term
Definition:Any process that set the alignment of spindle relative to other cellular structures.
Synonyms:exact_synonym: orienting of spindle;   spindle orientation



show annotations for term's descendants           Sort by:
 
establishment of spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 acts_upstream_of_or_within ISO UniProtKB:P27816 (PMID:21822276) RGD PMID:21822276 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,379,423...45,394,096
Ensembl chr10:45,379,515...45,394,094
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525
JBrowse link
G Map4 microtubule-associated protein 4 acts_upstream_of_or_within ISO (MGI:5293254|PMID:21822276)
UniProtKB:Q7Z460 (PMID:21822276)
RGD PMID:21822276 MGI:5293254 NCBI chr 8:109,925,233...110,064,370
Ensembl chr 8:109,925,575...110,064,362
JBrowse link
G Spag5 sperm associated antigen 5 acts_upstream_of_or_within ISO (MGI:5299957|PMID:22031545) RGD PMID:22031545 MGI:5299957 NCBI chr10:63,198,717...63,216,746
Ensembl chr10:63,198,768...63,216,745
JBrowse link
establishment of meiotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mos MOS proto-oncogene, serine/threonine kinase involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:81559|PMID:8692939)
Ensembl
UniProt
RGD
PMID:8692939 GO_REF:0000024 GO_REF:0000107 MGI:81559 NCBI chr 5:16,859,957...16,861,264
Ensembl chr 5:16,859,957...16,861,264
JBrowse link
establishment of mitotic spindle orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin-repeat and fibronectin type III domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:74,214,143...74,602,825 JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (MGI:4457234|PMID:19448628) RGD PMID:19448628 MGI:4457234 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in ISO (PMID:28394342) RGD PMID:28394342 NCBI chr 1:188,512,544...188,524,957
Ensembl chr 1:188,512,367...188,524,958
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4454588|PMID:20460369)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20460369 GO_REF:0000024 GO_REF:0000107 MGI:4454588 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782
JBrowse link
G Cenpa centromere protein A involved_in ISO (PMID:19468067) RGD PMID:19468067 NCBI chr 6:25,700,142...25,711,767
Ensembl chr 6:25,700,142...25,711,675
JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISO
IBA
ISS
(PMID:22327364)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22327364 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1917942|MGI:1923373|MGI:2150426|MGI:2443665 (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1345138|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:30992345) RGD PMID:30992345 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gpsm2 G-protein signaling modulator 2 involved_in
acts_upstream_of_or_within
ISO (PMID:22327364), (PMID:23870127)
(MGI:4950299|PMID:21385765)
RGD PMID:21385765 PMID:22327364 PMID:23870127 MGI:4950299 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154
JBrowse link
G Htt huntingtin involved_in ISO
IEA
(PMID:20696378)
GO_REF:0000107
RGD
Ensembl
PMID:20696378 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Insc INSC, spindle orientation adaptor protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4950299|PMID:21385765)
RGD PMID:21385765 PMID:21873635 MGI:4950299, RGD:13792537 NCBI chr 1:168,993,032...169,100,438
Ensembl chr 1:168,993,032...169,100,433
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO
IEA
(PMID:30992345)
GO_REF:0000107
RGD
Ensembl
PMID:30992345 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:23509069) RGD PMID:23509069 NCBI chr 4:95,906,692...95,918,885
Ensembl chr 4:95,906,817...95,913,470
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (MGI:5306866|PMID:21947081) RGD PMID:21947081 MGI:5306866 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122
JBrowse link
G Misp mitotic spindle positioning involved_in ISO (PMID:23509069), (PMID:23574715) RGD PMID:23509069 PMID:23574715 NCBI chr 7:9,870,390...9,886,541
Ensembl chr 7:9,870,444...9,886,541
JBrowse link
G Ndc80 NDC80 kinetochore complex component involved_in ISO (PMID:19468067) RGD PMID:19468067 NCBI chr 9:111,407,191...111,440,921
Ensembl chr 9:111,407,191...111,440,924
JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in ISO
IBA
(PMID:19468067)
PMID:21873635
RGD PMID:19468067 PMID:21873635 RGD:13792537 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in ISO UniProtKB:Q14CS0 (PMID:23649807) RGD PMID:23649807 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5754878|PMID:26765568)
(MGI:4950299|PMID:21385765)
(PMID:21816348), (PMID:24996901), (PMID:26765568)
RGD PMID:21385765 PMID:21816348 PMID:24996901 PMID:26765568 PMID:21873635 MGI:4950299 MGI:5754878, RGD:13792537 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in IBA
ISO
PMID:21873635
(PMID:11056532)
RGD PMID:11056532 PMID:21873635 RGD:13792537 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155 (MGI:5299957|PMID:22031545)
Ensembl
RGD
PMID:22031545 GO_REF:0000107 MGI:5299957 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (MGI:5430302|PMID:19959710) RGD PMID:19959710 MGI:5430302 NCBI chr 9:22,547,396...23,037,443 JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO
IEA
(PMID:23509069)
GO_REF:0000107
RGD
Ensembl
PMID:23509069 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) RGD PMID:26766442 MGI:5882149 NCBI chr 3:8,186,089...8,195,119
Ensembl chr 3:8,187,266...8,192,546
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 involved_in ISO
IBA
ISS
(PMID:19468067)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19468067 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,269,125...19,294,213
Ensembl chr10:19,269,127...19,294,127
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345138 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:120,557,276...120,561,918
Ensembl chr 2:120,556,706...120,566,189
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in ISO UniProtKB:Q9UNZ2 (PMID:23649807) RGD PMID:23649807 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link
G Zw10 zw10 kinetochore protein involved_in ISO (PMID:19468067) RGD PMID:19468067 NCBI chr 8:49,396,541...49,424,743
Ensembl chr 8:49,396,545...49,421,805
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19494
    cellular process 18342
      establishment or maintenance of cell polarity 231
        establishment of cell polarity 150
          establishment of spindle orientation 39
            establishment of meiotic spindle orientation 1
            establishment of mitotic spindle orientation + 33
Path 2
Term Annotations click to browse term
  biological_process 19494
    cellular process 18342
      cellular component organization or biogenesis 6483
        cellular component organization 6237
          organelle organization 3753
            cytoskeleton organization 1453
              microtubule cytoskeleton organization 639
                establishment of spindle localization 52
                  establishment of spindle orientation 39
                    establishment of meiotic spindle orientation 1
                    establishment of mitotic spindle orientation + 33
paths to the root