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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization
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Accession:GO:0051276 term browser browse the term
Definition:A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.
Synonyms:exact_synonym: chromosome organisation
 related_synonym: chromosome organization and biogenesis;   maintenance of genome integrity;   nuclear genome maintenance
 alt_id: GO:0007001;   GO:0051277


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chromosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:3695814|PMID:17200209) MGI PMID:17200209 MGI:3695814 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G ATR ATR serine/threonine kinase acts_upstream_of_or_within ISO (MGI:1353879|PMID:10691732) MGI PMID:10691732 MGI:1353879 NCBI chr 3:142,449,235...142,578,793
Ensembl chr 3:142,449,007...142,578,733
JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:3505667|PMID:15450411)
(MGI:1312959|PMID:9808625)
MGI PMID:9808625 PMID:15450411 MGI:1312959 MGI:3505667 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G BNC1 basonuclin 1 acts_upstream_of_or_within ISO (MGI:3624199|PMID:16624857) MGI PMID:16624857 MGI:3624199 NCBI chr15:83,255,884...83,284,664
Ensembl chr15:83,255,884...83,284,664
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:3833141|PMID:16859999)
(MGI:1203345|PMID:9660919)
MGI PMID:9660919 PMID:16859999 MGI:1203345 MGI:3833141 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268
JBrowse link
G CDCA8 cell division cycle associated 8 involved_in IMP (PMID:15260989) UniProt PMID:15260989 NCBI chr 1:37,692,516...37,709,719
Ensembl chr 1:37,692,481...37,709,719
JBrowse link
G CENPT centromere protein T involved_in IMP (PMID:21695110) UniProt PMID:21695110 NCBI chr16:67,828,157...67,847,693
Ensembl chr16:67,828,157...67,847,811
JBrowse link
G CENPW centromere protein W involved_in IMP (PMID:21695110) UniProt PMID:21695110 NCBI chr 6:126,339,696...126,483,320
Ensembl chr 6:126,340,115...126,348,875
JBrowse link
G CTC1 CST telomere replication complex component 1 acts_upstream_of_or_within ISO (MGI:5426340|PMID:22531781) MGI PMID:22531781 MGI:5426340 NCBI chr17:8,224,815...8,248,079
Ensembl chr17:8,224,815...8,248,056
JBrowse link
G DCLRE1C DNA cross-link repair 1C acts_upstream_of_or_within ISO (MGI:2447929|PMID:12504013)
(MGI:3514096|PMID:12615897)
MGI PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:3047512|PMID:15199134) MGI PMID:15199134 MGI:3047512 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
JBrowse link
G GEM GTP binding protein overexpressed in skeletal muscle involved_in IMP (PMID:22964304) UniProt PMID:22964304 NCBI chr 8:94,249,249...94,262,345
Ensembl chr 8:94,249,253...94,262,350
JBrowse link
G ITPA inosine triphosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5009783|PMID:20081199) Ensembl
MGI
PMID:20081199 GO_REF:0000107 MGI:5009783 NCBI chr20:3,208,676...3,227,449
Ensembl chr20:3,208,868...3,223,870
JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3043875|PMID:15175260) UniProt
MGI
PMID:15175260 GO_REF:0000024 MGI:3043875 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease acts_upstream_of_or_within ISO (MGI:2683367|PMID:14690604) MGI PMID:14690604 MGI:2683367 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,570...94,493,885
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in IDA (PMID:10962037) UniProt PMID:10962037 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr 3:131,381,671...131,388,830
Ensembl chr 3:131,381,671...131,388,830
JBrowse link
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450001|PMID:12556505) Ensembl
MGI
PMID:12556505 GO_REF:0000107 MGI:2450001 NCBI chr 5:52,787,916...52,804,044
Ensembl chr 5:52,787,916...52,804,044
JBrowse link
G POT1 protection of telomeres 1 acts_upstream_of_or_within ISO (MGI:3692019|PMID:17053789) MGI PMID:17053789 MGI:3692019 NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983
JBrowse link
G PTTG1 PTTG1 regulator of sister chromatid separation, securin involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:160,421,855...160,428,744
Ensembl chr 5:160,421,855...160,428,739
JBrowse link
G PTTG2 pituitary tumor-transforming 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:37,960,398...37,961,128
Ensembl chr 4:37,960,398...37,961,128
JBrowse link
G PTTG3P pituitary tumor-transforming 3, pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:66,767,329...66,768,034
Ensembl chr 8:66,767,400...66,768,005
JBrowse link
G RAD50 RAD50 double strand break repair protein acts_upstream_of_or_within ISO (MGI:3831647|PMID:19001091) MGI PMID:19001091 MGI:3831647 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD51D RAD51 paralog D acts_upstream_of_or_within ISO (MGI:3574680|PMID:15781618)
(MGI:5050390|PMID:20813759)
MGI PMID:15781618 PMID:20813759 MGI:3574680 MGI:5050390 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,221...35,121,522
JBrowse link
G RAD54L RAD54 like acts_upstream_of_or_within ISO (MGI:3043875|PMID:15175260) MGI PMID:15175260 MGI:3043875 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G RPA1 replication protein A1 acts_upstream_of_or_within ISO (MGI:3581950|PMID:15965476) MGI PMID:15965476 MGI:3581950 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (MGI:5050390|PMID:20813759) MGI PMID:20813759 MGI:5050390 NCBI chr 1:35,176,380...35,193,174
Ensembl chr 1:35,176,378...35,193,145
JBrowse link
G SMC4 structural maintenance of chromosomes 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:160,399,638...160,434,953
Ensembl chr 3:160,399,274...160,434,954
JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3692019|PMID:17053789)
(MGI:3695814|PMID:17200209)
MGI PMID:17053789 PMID:17200209 MGI:3692019 MGI:3695814 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chr 1:40,258,078...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
G ZNF830 zinc finger protein 830 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5428139|PMID:23213458) Ensembl
MGI
PMID:23213458 GO_REF:0000107 MGI:5428139 NCBI chr17:34,961,540...34,963,777
Ensembl chr17:34,961,540...34,963,777
JBrowse link
apoptotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACIN1 apoptotic chromatin condensation inducer 1 involved_in IDA (PMID:10490026) UniProt PMID:10490026 NCBI chr14:23,058,564...23,095,614
Ensembl chr14:23,058,564...23,095,614
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in IDA (PMID:10959840) UniProt PMID:10959840 NCBI chr 1:3,857,286...3,885,429
Ensembl chr 1:3,857,267...3,885,429
JBrowse link
G ERN2 endoplasmic reticulum to nucleus signaling 2 involved_in IMP (PMID:11175748) UniProt PMID:11175748 NCBI chr16:23,690,310...23,713,248
Ensembl chr16:23,690,310...23,713,226
JBrowse link
G GPER1 G protein-coupled estrogen receptor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:1,087,118...1,093,810
Ensembl chr 7:1,082,208...1,093,815
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IBA
IDA
(PMID:21873635)
(PMID:10959840)
GO_Central
UniProt
PMID:10959840 PMID:21873635 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
attachment of mitotic spindle microtubules to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IMP (PMID:22581055) UniProt PMID:22581055 NCBI chr16:88,803,789...88,809,258
Ensembl chr16:88,803,789...88,809,258
JBrowse link
G CENPC centromere protein C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:67,468,762...67,545,503
Ensembl chr 4:67,468,762...67,545,503
JBrowse link
G CENPE centromere protein E involved_in IMP (PMID:15843429) UniProt PMID:15843429 NCBI chr 4:103,105,811...103,198,408
Ensembl chr 4:103,105,349...103,198,445
JBrowse link
G CHAMP1 chromosome alignment maintaining phosphoprotein 1 involved_in IBA
IEA
IMP
(PMID:21873635)
(PMID:21063390)
GO_Central
InterPro
UniProt
PMID:21063390 PMID:21873635 GO_REF:0000002 NCBI chr13:114,314,503...114,327,322
Ensembl chr13:114,314,482...114,337,626
JBrowse link
G KIF2C kinesin family member 2C involved_in IMP (PMID:23891108) UniProt PMID:23891108 NCBI chr 1:44,739,704...44,767,767
Ensembl chr 1:44,739,818...44,767,767
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:1,815,795...2,232,945
Ensembl chr 7:1,815,793...2,233,243
JBrowse link
G MIS12 MIS12 kinetochore complex component involved_in IMP (PMID:23891108) UniProt PMID:23891108 NCBI chr17:5,486,374...5,490,814
Ensembl chr17:5,486,285...5,490,814
JBrowse link
G NDC80 NDC80 kinetochore complex component involved_in IMP
IEA
IBA
(PMID:23891108), (PMID:25743205)
(PMID:21873635)
UniProt
InterPro
GO_Central
PMID:21873635 PMID:23891108 PMID:25743205 GO_REF:0000002 NCBI chr18:2,571,557...2,616,635
Ensembl chr18:2,571,557...2,616,635
JBrowse link
G NUF2 NUF2 component of NDC80 kinetochore complex involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:163,321,948...163,355,764
Ensembl chr 1:163,266,576...163,355,764
JBrowse link
G RMDN1 regulator of microtubule dynamics 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:86,467,055...86,514,357
Ensembl chr 8:86,468,257...86,514,357
JBrowse link
G SEH1L SEH1 like nucleoporin involved_in IMP (PMID:17363900) UniProt PMID:17363900 NCBI chr18:12,947,988...12,987,665
Ensembl chr18:12,947,133...12,987,536
JBrowse link
CENP-A containing nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPP centromere protein P involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:92,325,457...92,620,529
Ensembl chr 9:92,325,953...92,620,529
JBrowse link
G CENPW centromere protein W involved_in TAS (PMID:19533040) UniProt PMID:19533040 NCBI chr 6:126,339,696...126,483,320
Ensembl chr 6:126,340,115...126,348,875
JBrowse link
G HJURP Holliday junction recognition protein involved_in IMP
IBA
(PMID:19410544), (PMID:19410545)
(PMID:21873635)
UniProt
GO_Central
PMID:19410544 PMID:19410545 PMID:21873635 NCBI chr 2:233,836,702...233,854,535
Ensembl chr 2:233,833,416...233,854,566
JBrowse link
G ITGB3BP integrin subunit beta 3 binding protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:63,440,770...63,529,395
Ensembl chr 1:63,440,770...63,593,721
JBrowse link
G MIS18A MIS18 kinetochore protein A acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5438906|PMID:22516971)
(PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:22516971 MGI:5438906 NCBI chr21:32,154,682...32,283,954
Ensembl chr21:32,268,228...32,279,049
JBrowse link
G NASP nuclear autoantigenic sperm protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:45,584,041...45,618,893
Ensembl chr 1:45,583,846...45,618,904
JBrowse link
G OIP5 Opa interacting protein 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:41,309,273...41,332,591
Ensembl chr15:41,309,273...41,332,591
JBrowse link
centromere complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPI centromere protein I involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:101,098,159...101,181,847
Ensembl chr  X:101,098,188...101,166,126
JBrowse link
G CENPO centromere protein O involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:24,793,339...24,822,376
Ensembl chr 2:24,793,136...24,822,376
JBrowse link
G CENPV centromere protein V involved_in IMP (PMID:18772885) UniProt PMID:18772885 NCBI chr17:16,342,537...16,353,469
Ensembl chr17:16,342,534...16,353,656
JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5700253|PMID:26490168) Ensembl
MGI
PMID:26490168 GO_REF:0000107 MGI:5700253 NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,559
JBrowse link
G CCNB1IP1 cyclin B1 interacting protein 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3757893|PMID:17784788) UniProt
MGI
PMID:17784788 GO_REF:0000024 MGI:3757893 NCBI chr14:20,311,370...20,333,279
Ensembl chr14:20,311,368...20,333,312
JBrowse link
G RNF212 ring finger protein 212 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:1,056,248...1,113,794
Ensembl chr 4:1,056,250...1,113,564
JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5315075|PMID:22164254)
GO_Central
MGI
PMID:21873635 PMID:22164254 MGI:5315075 NCBI chr 1:114,854,268...114,995,370
Ensembl chr 1:114,854,863...114,995,370
JBrowse link
G SYCP3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within
ISO (MGI:2179610|PMID:12004129)
(MGI:5315075|PMID:22164254)
UniProt
MGI
PMID:12004129 PMID:22164254 MGI:2179610 MGI:5315075 NCBI chr12:101,728,648...101,739,721
Ensembl chr12:101,728,648...101,739,472
JBrowse link
G TEX11 testis expressed 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3774244|PMID:18316482) Ensembl
MGI
PMID:18316482 GO_REF:0000107 MGI:3774244 NCBI chr  X:70,511,227...70,908,711
Ensembl chr  X:70,528,940...70,908,711
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450033|PMID:12556476) Ensembl
MGI
PMID:12556476 GO_REF:0000107 MGI:2450033 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,469...134,392,108
JBrowse link
chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDAN1 codanin 1 involved_in IMP (PMID:22407294) UniProt PMID:22407294 NCBI chr15:42,723,544...42,737,133
Ensembl chr15:42,723,544...42,737,128
JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IDA (PMID:8858152) UniProt PMID:8858152 NCBI chr19:4,402,596...4,448,322
Ensembl chr19:4,402,640...4,445,018
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B involved_in IDA (PMID:8858152) UniProt PMID:8858152 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G M1AP meiosis 1 associated protein involved_in NAS (PMID:9927484) UniProt PMID:9927484 NCBI chr 2:74,557,640...74,648,330
Ensembl chr 2:74,557,883...74,648,338
JBrowse link
G NOC2L NOC2 like nucleolar associated transcriptional repressor involved_in IDA (PMID:16322561) UniProt PMID:16322561 NCBI chr 1:944,203...959,256
Ensembl chr 1:944,203...959,309
JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IDA (PMID:8858152) UniProt PMID:8858152 NCBI chr 1:32,651,208...32,686,211
Ensembl chr 1:32,651,142...32,686,211
JBrowse link
G TP53 tumor protein p53 involved_in IDA (PMID:16322561) UniProt PMID:16322561 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
chromatin assembly or disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASF1B anti-silencing function 1B histone chaperone involved_in IEA InterPro GO_REF:0000002 NCBI chr19:14,119,512...14,136,589
Ensembl chr19:14,119,512...14,136,613
JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2179578|PMID:11980720) Ensembl
MGI
PMID:11980720 GO_REF:0000107 MGI:2179578 NCBI chr 7:73,440,406...73,522,293
Ensembl chr 7:73,440,406...73,522,293
JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1333986|PMID:10204490) Ensembl
MGI
PMID:10204490 GO_REF:0000107 MGI:1333986 NCBI chr17:7,884,764...7,912,755
Ensembl chr17:7,884,796...7,912,760
JBrowse link
G HDAC8 histone deacetylase 8 involved_in TAS (PMID:10748112) PINC PMID:10748112 NCBI chr  X:72,329,516...72,573,099
Ensembl chr  X:72,329,516...72,573,101
JBrowse link
G HIRIP3 HIRA interacting protein 3 involved_in TAS (PMID:9710638) PINC PMID:9710638 NCBI chr16:29,992,321...29,996,096
Ensembl chr16:29,992,330...29,996,074
JBrowse link
G MTA2 metastasis associated 1 family member 2 involved_in TAS (PMID:10444591) PINC PMID:10444591 NCBI chr11:62,593,214...62,601,865
Ensembl chr11:62,593,214...62,601,865
JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 acts_upstream_of_or_within ISO (MGI:2179578|PMID:11980720) MGI PMID:11980720 MGI:2179578 NCBI chr 4:143,513,501...143,557,486
Ensembl chr 4:143,513,702...143,557,486
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in IMP (PMID:10949293) UniProt PMID:10949293 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315
JBrowse link
chromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:83,459,517...83,485,137
Ensembl chr 4:83,459,517...83,523,348
JBrowse link
G AC006064.6 novel transcript involved_in IEA UniProt GO_REF:0000043 Ensembl chr12:6,556,886...6,607,367 JBrowse link
G ACTL6B actin like 6B involved_in NAS (PMID:10380635) UniProt PMID:10380635 NCBI chr 7:100,643,097...100,656,448
Ensembl chr 7:100,643,097...100,656,448
JBrowse link
G AEBP2 AE binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:19,404,101...19,522,227
Ensembl chr12:19,404,045...19,720,801
JBrowse link
G ALKBH4 alkB homolog 4, lysine demethylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:102,456,220...102,464,863
Ensembl chr 7:102,456,238...102,464,863
JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:1934781|PMID:11318604) MGI PMID:11318604 MGI:1934781 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARID4B AT-rich interaction domain 4B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:235,166,895...235,328,224
Ensembl chr 1:235,131,634...235,328,219
JBrowse link
G ATAD2 ATPase family AAA domain containing 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:123,319,850...123,396,447
Ensembl chr 8:123,319,850...123,416,350
JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249
JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901
JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,639,028...31,660,900
Ensembl chr 6:31,639,028...31,652,705
JBrowse link
G BANP BTG3 associated nuclear protein involved_in IEA UniProt GO_REF:0000043 NCBI chr16:87,949,216...88,077,318
Ensembl chr16:87,949,244...88,077,318
JBrowse link
G BCORL1 BCL6 corepressor like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:129,980,285...130,058,081
Ensembl chr  X:129,981,107...130,058,071
JBrowse link
G BRD2 bromodomain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505
JBrowse link
G BRD3 bromodomain containing 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:134,030,305...134,068,533
Ensembl chr 9:134,030,305...134,068,535
JBrowse link
G BRD4 bromodomain containing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G BRD9 bromodomain containing 9 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:863,735...892,803
Ensembl chr 5:850,291...892,801
JBrowse link
G BRDT bromodomain testis associated involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:91,949,371...92,014,428
Ensembl chr 1:91,949,343...92,014,426
JBrowse link
G BUD23 BUD23 rRNA methyltransferase and ribosome maturation factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:73,683,571...73,698,212
Ensembl chr 7:73,683,025...73,705,161
JBrowse link
G C17orf49 chromosome 17 open reading frame 49 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:7,014,782...7,017,520
Ensembl chr17:7,014,495...7,017,525
JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:10,871,553...10,923,078
Ensembl chr19:10,871,553...10,923,075
JBrowse link
G CBX2 chromobox 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:79,776,254...79,787,983
Ensembl chr17:79,778,148...79,787,983
JBrowse link
G CBX4 chromobox 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:79,833,156...79,839,440
Ensembl chr17:79,833,156...79,839,440
JBrowse link
G CBX6 chromobox 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:38,861,422...38,872,216
Ensembl chr22:38,861,422...38,872,249
JBrowse link
G CBX7 chromobox 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680
JBrowse link
G CDAN1 codanin 1 acts_upstream_of_or_within IMP (PMID:21364188) MGI PMID:21364188 NCBI chr15:42,723,544...42,737,133
Ensembl chr15:42,723,544...42,737,128
JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:92,900,324...93,027,996
Ensembl chr15:92,900,189...93,027,996
JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:7,884,764...7,912,755
Ensembl chr17:7,884,796...7,912,760
JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524
JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:6,101,787...6,180,321
Ensembl chr 1:6,101,787...6,180,321
JBrowse link
G CHD6 chromodomain helicase DNA binding protein 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:41,402,083...41,618,377
Ensembl chr20:41,402,083...41,618,384
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:21,385,199...21,456,123
Ensembl chr14:21,385,194...21,456,126
JBrowse link
G CHD9 chromodomain helicase DNA binding protein 9 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:53,054,982...53,327,502
Ensembl chr16:53,054,991...53,329,150
JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,958,453...3,971,099
Ensembl chr19:3,958,453...3,971,123
JBrowse link
G DEK DEK proto-oncogene involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 6:18,223,860...18,264,541
Ensembl chr 6:18,223,860...18,264,548
JBrowse link
G DNAJC2 DnaJ heat shock protein family (Hsp40) member C2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:103,312,289...103,344,790
Ensembl chr 7:103,312,289...103,344,830
JBrowse link
G DNMT1 DNA methyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G DPF2 double PHD fingers 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:65,333,840...65,354,262
Ensembl chr11:65,333,852...65,354,262
JBrowse link
G DPF3 double PHD fingers 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:72,609,034...72,894,101
Ensembl chr14:72,609,034...72,894,101
JBrowse link
G DPPA3 developmental pluripotency associated 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:7,711,433...7,717,559
Ensembl chr12:7,711,433...7,717,559
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 involved_in IDA (PMID:12004135) UniProt PMID:12004135 NCBI chr 9:137,619,001...137,836,127
Ensembl chr 9:137,618,992...137,870,016
JBrowse link
G EMSY EMSY transcriptional repressor, BRCA2 interacting involved_in IEA UniProt GO_REF:0000043 NCBI chr11:76,444,928...76,553,031
Ensembl chr11:76,444,923...76,553,025
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in TAS (PMID:8921387) PINC PMID:8921387 NCBI chr 7:148,807,374...148,884,344
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FAM50A family with sequence similarity 50 member A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,444,141...154,450,654
Ensembl chr  X:154,444,141...154,450,654
JBrowse link
G FAM50B family with sequence similarity 50 member B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:3,831,901...3,851,320
Ensembl chr 6:3,849,373...3,851,320
JBrowse link
G FOXA2 forkhead box A2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,580,998...22,585,455
JBrowse link
G FOXA3 forkhead box A3 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:45,864,326...45,873,797
Ensembl chr19:45,863,989...45,873,797
JBrowse link
G FTX FTX transcript, XIST regulator acts_upstream_of_or_within ISO (MGI:4936795|PMID:21118898) MGI PMID:21118898 MGI:4936795 NCBI chr  X:74,028,136...74,293,574
Ensembl chr  X:73,940,435...74,293,574
JBrowse link
G GATAD1 GATA zinc finger domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:92,447,448...92,494,631
Ensembl chr 7:92,447,482...92,460,075
JBrowse link
G GFI1B growth factor independent 1B transcriptional repressor involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:132,945,531...132,991,697
Ensembl chr 9:132,944,000...132,991,687
JBrowse link
G GPX4 glutathione peroxidase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934492|PMID:11344099) Ensembl
MGI
PMID:11344099 GO_REF:0000107 MGI:1934492 NCBI chr19:1,103,994...1,106,779
Ensembl chr19:1,103,926...1,106,791
JBrowse link
G H1-5 H1.5 linker histone, cluster member involved_in IMP (PMID:22956909) UniProt PMID:22956909 NCBI chr 6:27,866,792...27,867,588
Ensembl chr 6:27,866,792...27,867,588
JBrowse link
G H2AC1 H2A clustered histone 1 acts_upstream_of_or_within ISO (MGI:5569674|PMID:24506885) MGI PMID:24506885 MGI:5569674 NCBI chr 6:25,726,063...25,726,562
Ensembl chr 6:25,726,063...25,726,562
JBrowse link
G H2BC1 H2B clustered histone 1 acts_upstream_of_or_within ISO (MGI:5569674|PMID:24506885) MGI PMID:24506885 MGI:5569674 NCBI chr 6:25,726,777...25,727,345
Ensembl chr 6:25,726,777...25,727,345
JBrowse link
G HAT1 histone acetyltransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:171,922,425...171,983,686
Ensembl chr 2:171,922,448...171,983,686
JBrowse link
G HDAC1 histone deacetylase 1 involved_in TAS (PMID:12711221) UniProt PMID:12711221 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HDAC10 histone deacetylase 10 involved_in NAS (PMID:11861901) UniProt PMID:11861901 NCBI chr22:50,245,183...50,251,265
Ensembl chr22:50,245,183...50,251,405
JBrowse link
G HDAC11 histone deacetylase 11 involved_in TAS (PMID:12711221) UniProt PMID:12711221 NCBI chr 3:13,478,903...13,506,416
Ensembl chr 3:13,479,724...13,506,424
JBrowse link
G HDAC3 histone deacetylase 3 involved_in TAS (PMID:12711221) UniProt PMID:12711221 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849
JBrowse link
G HDAC5 histone deacetylase 5 involved_in TAS (PMID:12711221) UniProt PMID:12711221 NCBI chr17:44,076,753...44,123,651
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G HDAC8 histone deacetylase 8 involved_in TAS (PMID:12711221) UniProt PMID:12711221 NCBI chr  X:72,329,516...72,573,099
Ensembl chr  X:72,329,516...72,573,101
JBrowse link
G HLTF helicase like transcription factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:149,030,063...149,086,534
Ensembl chr 3:149,030,127...149,086,554
JBrowse link
G HMG20A high mobility group 20A involved_in NAS (PMID:10773667) UniProt PMID:10773667 NCBI chr15:77,420,705...77,519,899
Ensembl chr15:77,420,412...77,485,607
JBrowse link
G HMG20B high mobility group 20B involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,572,916...3,579,083
Ensembl chr19:3,572,777...3,579,088
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in TAS (PMID:19551524) UniProt PMID:19551524 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HMGB2 high mobility group box 2 involved_in NAS (PMID:11909973) UniProt PMID:11909973 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3590574|PMID:12660172)
GO_Central
MGI
PMID:12660172 PMID:21873635 MGI:3590574 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647
JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:26,472,440...26,476,642
Ensembl chr 1:26,472,440...26,476,642
JBrowse link
G HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:45,511,136...45,556,730
Ensembl chr15:45,511,136...45,586,290
JBrowse link
G HMGN3 high mobility group nucleosomal binding domain 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:79,201,245...79,234,682
Ensembl chr 6:79,201,245...79,234,738
JBrowse link
G HMGN4 high mobility group nucleosomal binding domain 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,538,347...26,546,933
Ensembl chr 6:26,538,366...26,546,933
JBrowse link
G HMGN5 high mobility group nucleosome binding domain 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5578301|PMID:24392144) UniProt
MGI
InterPro
PMID:24392144 GO_REF:0000002 GO_REF:0000043 MGI:5578301 NCBI chr  X:81,113,699...81,201,913
Ensembl chr  X:81,113,699...81,201,913
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G HYMAI hydatidiform mole associated and imprinted acts_upstream_of_or_within ISO (MGI:5438422|PMID:22723905) MGI PMID:22723905 MGI:5438422 NCBI chr 6:144,004,916...144,008,259
Ensembl chr 6:144,004,916...144,008,262
JBrowse link
G IKZF1 IKAROS family zinc finger 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:50,303,453...50,405,101
Ensembl chr 7:50,304,068...50,405,101
JBrowse link
G ING1 inhibitor of growth family member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:110,712,623...110,723,339
Ensembl chr13:110,712,736...110,723,339
JBrowse link
G ING2 inhibitor of growth family member 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429
JBrowse link
G ING3 inhibitor of growth family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:120,950,749...120,977,216
Ensembl chr 7:120,950,763...120,977,216
JBrowse link
G JAK2 Janus kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948
JBrowse link
G KDM2A lysine demethylase 2A involved_in IEA UniProt GO_REF:0000043 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KDM5B lysine demethylase 5B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:202,724,495...202,809,470
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G KMT2D lysine methyltransferase 2D involved_in IEA UniProt GO_REF:0000043 NCBI chr12:49,018,975...49,060,884
Ensembl chr12:49,018,978...49,060,794
JBrowse link
G KMT2E lysine methyltransferase 2E (inactive) involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:104,940,949...105,115,019
Ensembl chr 7:105,014,190...105,115,019
JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 involved_in IDA
IEA
(PMID:17540172) UniProt PMID:17540172 GO_REF:0000043 NCBI chr20:43,507,697...43,550,954
Ensembl chr20:43,489,442...43,550,954
JBrowse link
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:41,205,192...41,231,271
Ensembl chr22:41,205,282...41,231,271
JBrowse link
G L3MBTL3 L3MBTL histone methyl-lysine binding protein 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:130,018,581...130,141,440
Ensembl chr 6:130,013,699...130,141,449
JBrowse link
G L3MBTL4 L3MBTL histone methyl-lysine binding protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:5,954,703...6,415,259
Ensembl chr18:5,954,706...6,415,237
JBrowse link
G LRWD1 leucine rich repeats and WD repeat domain containing 1 involved_in IMP
IBA
(PMID:20932478)
(PMID:21873635)
UniProt
GO_Central
PMID:20932478 PMID:21873635 NCBI chr 7:102,464,984...102,473,168
Ensembl chr 7:102,464,956...102,473,168
JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IEA UniProt GO_REF:0000043 NCBI chr10:70,052,846...70,112,282
Ensembl chr10:70,052,544...70,112,282
JBrowse link
G MBTD1 mbt domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:51,177,419...51,260,511
Ensembl chr17:51,177,425...51,260,163
JBrowse link
G METTL4 methyltransferase 4, N6-adenosine involved_in IEA UniProt GO_REF:0000043 NCBI chr18:2,537,530...2,571,505
Ensembl chr18:2,537,525...2,571,509
JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139
JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158
JBrowse link
G MOS MOS proto-oncogene, serine/threonine kinase involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,112,942...56,113,982
Ensembl chr 8:56,112,942...56,113,982
JBrowse link
G MSL3 MSL complex subunit 3 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr  X:11,758,159...11,775,772
Ensembl chr  X:11,758,159...11,775,772
JBrowse link
G MTF2 metal response element binding transcription factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:93,079,283...93,139,076
Ensembl chr 1:93,079,235...93,139,079
JBrowse link
G NCOR1 nuclear receptor corepressor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:16,029,157...16,216,475
Ensembl chr17:16,029,157...16,218,185
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:1,871,393...1,982,207
Ensembl chr 4:1,871,393...1,982,207
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISS ParkinsonsUK-UCL GO_REF:0000024 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
G PADI4 peptidyl arginine deiminase 4 involved_in TAS
ISS
Reactome
UniProt
GO_REF:0000024 Reactome:R-HSA-4839726 NCBI chr 1:17,308,195...17,364,004
Ensembl chr 1:17,308,195...17,364,004
JBrowse link
G PHF1 PHD finger protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:33,410,751...33,416,443
Ensembl chr 6:33,410,399...33,416,453
JBrowse link
G PHF13 PHD finger protein 13 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:6,613,731...6,624,030
Ensembl chr 1:6,613,731...6,624,030
JBrowse link
G PHF19 PHD finger protein 19 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:120,855,651...120,902,160
Ensembl chr 9:120,855,651...120,894,896
JBrowse link
G PHF21A PHD finger protein 21A involved_in IEA UniProt GO_REF:0000043 NCBI chr11:45,929,319...46,121,454
Ensembl chr11:45,929,319...46,121,454
JBrowse link
G PWWP3A PWWP domain containing 3A, DNA repair factor involved_in IBA
IMP
IEA
(PMID:21873635)
(PMID:20347427)
GO_Central
UniProt
InterPro
PMID:20347427 PMID:21873635 GO_REF:0000002 NCBI chr19:1,354,959...1,378,429
Ensembl chr19:1,354,711...1,378,431
JBrowse link
G RAG2 recombination activating 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:36,591,943...36,598,236
Ensembl chr11:36,575,574...36,598,279
JBrowse link
G RBBP7 RB binding protein 7, chromatin remodeling factor involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:16,844,341...16,870,362
Ensembl chr  X:16,839,283...16,870,362
JBrowse link
G RBL1 RB transcriptional corepressor like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:36,996,349...37,096,029
Ensembl chr20:36,996,349...37,095,997
JBrowse link
G RBL2 RB transcriptional corepressor like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:53,434,471...53,491,648
Ensembl chr16:53,433,977...53,491,648
JBrowse link
G RCBTB1 RCC1 and BTB domain containing protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:49,531,944...49,585,587
Ensembl chr13:49,531,946...49,585,558
JBrowse link
G RCCD1 RCC1 domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:90,954,864...90,964,858
Ensembl chr15:90,954,870...90,963,125
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:65,653,601...65,662,946
Ensembl chr11:65,653,597...65,663,090
JBrowse link
G RSBN1 round spermatid basic protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:113,761,832...113,812,537
Ensembl chr 1:113,761,832...113,812,476
JBrowse link
G SAFB scaffold attachment factor B involved_in TAS (PMID:1324173) PINC PMID:1324173 NCBI chr19:5,623,081...5,668,478
Ensembl chr19:5,623,035...5,668,478
JBrowse link
G SATB1 SATB homeobox 1 involved_in
acts_upstream_of_or_within
TAS
ISO
(PMID:1505028)
(MGI:2658695|PMID:12692553)
PINC
MGI
PMID:1505028 PMID:12692553 MGI:2658695 NCBI chr 3:18,345,377...18,445,592
Ensembl chr 3:18,345,377...18,445,588
JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase involved_in NAS (PMID:12514135) UniProt PMID:12514135 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699
JBrowse link
G SFMBT1 Scm like with four mbt domains 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:52,899,209...53,046,655
Ensembl chr 3:52,903,572...53,046,750
JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:22956909) UniProt PMID:22956909 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in NAS (PMID:9337405) UniProt PMID:9337405 NCBI chr13:112,067,149...112,071,706
Ensembl chr13:112,067,149...112,071,706
JBrowse link
G SOX15 SRY-box transcription factor 15 involved_in NAS (PMID:8332506) UniProt PMID:8332506 NCBI chr17:7,588,178...7,590,094
Ensembl chr17:7,588,178...7,590,094
JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in NAS (PMID:7849401) UniProt PMID:7849401 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G SPIN1 spindlin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:88,388,444...88,478,694
Ensembl chr 9:88,388,430...88,478,694
JBrowse link
G SS18L1 SS18L1 subunit of BAF chromatin remodeling complex involved_in IEA UniProt GO_REF:0000043 NCBI chr20:62,143,765...62,182,514
Ensembl chr20:62,143,769...62,182,514
JBrowse link
G STPG4 sperm-tail PG-rich repeat containing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:47,086,991...47,155,308
Ensembl chr 2:47,045,538...47,155,308
JBrowse link
G SUPT4H1 SPT4 homolog, DSIF elongation factor subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:58,345,178...58,352,201
Ensembl chr17:58,345,175...58,353,093
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in TAS (PMID:10949293) PINC PMID:10949293 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016
JBrowse link
G TCF7L1 transcription factor 7 like 1 involved_in NAS (PMID:11085512), (PMID:1741298) UniProt PMID:1741298 PMID:11085512 NCBI chr 2:85,133,392...85,310,387
Ensembl chr 2:85,133,392...85,310,387
JBrowse link
G TDG thymine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G TDRD3 tudor domain containing 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:60,396,457...60,573,879
Ensembl chr13:60,396,457...60,573,878
JBrowse link
G TET1 tet methylcytosine dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:68,560,337...68,700,794
Ensembl chr10:68,560,337...68,694,487
JBrowse link
G TLK1 tousled like kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:170,990,823...171,231,293
Ensembl chr 2:170,990,823...171,231,314
JBrowse link
G TLK2 tousled like kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:62,470,908...62,615,481
Ensembl chr17:62,458,658...62,615,481
JBrowse link
G TOX thymocyte selection associated high mobility group box involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:58,805,412...59,119,147
Ensembl chr 8:58,805,412...59,119,147
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G UBN1 ubinuclein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:4,846,665...4,882,401
Ensembl chr16:4,846,665...4,882,401
JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:176,905,005...177,022,640
Ensembl chr 5:176,905,005...177,022,633
JBrowse link
G UTP3 UTP3 small subunit processome component involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:70,688,532...70,690,551
Ensembl chr 4:70,688,532...70,690,551
JBrowse link
G VCX variable charge X-linked involved_in TAS (PMID:12862317) UniProt PMID:12862317 NCBI chr  X:7,842,262...7,844,143
Ensembl chr  X:7,842,262...7,844,143
JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA UniProt GO_REF:0000043 NCBI chr10:28,532,772...28,623,112
Ensembl chr10:28,532,493...28,623,112
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in ISS UniProt GO_REF:0000024 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3789238|PMID:16079796) MGI PMID:16079796 MGI:3789238 NCBI chr 1:40,258,078...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
G ZMYND11 zinc finger MYND-type containing 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:130,088...254,637
Ensembl chr10:134,465...254,637
JBrowse link
G ZNF304 zinc finger protein 304 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:57,351,253...57,359,898
Ensembl chr19:57,351,271...57,359,898
JBrowse link
G ZNF462 zinc finger protein 462 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4440672|PMID:20219459) Ensembl
MGI
PMID:20219459 GO_REF:0000107 MGI:4440672 NCBI chr 9:106,860,154...107,013,634
Ensembl chr 9:106,863,166...107,013,634
JBrowse link
G ZNF518A zinc finger protein 518A involved_in IEA UniProt GO_REF:0000043 NCBI chr10:96,128,906...96,205,291
Ensembl chr10:96,129,715...96,205,288
JBrowse link
G ZNF518B zinc finger protein 518B involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:10,439,880...10,457,426
Ensembl chr 4:10,439,880...10,457,426
JBrowse link
chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC106886.5 novel transcript involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr16:30,704,067...30,745,169 JBrowse link
G ACTB actin beta involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902
JBrowse link
G ACTL6A actin like 6A involved_in
acts_upstream_of_or_within
IC
HDA
IBA
ISO
IDA
(PMID:18816825)
(PMID:16217013)
(PMID:21873635)
(MGI:1314932|PMID:9845365)
(PMID:11726552)
BHF-UCL
UniProt
GO_Central
MGI
PMID:9845365 PMID:11726552 PMID:16217013 PMID:18816825 PMID:21873635 MGI:1314932 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407
JBrowse link
G ACTL6B actin like 6B involved_in IDA
IBA
(PMID:11726552)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:11726552 PMID:21873635 NCBI chr 7:100,643,097...100,656,448
Ensembl chr 7:100,643,097...100,656,448
JBrowse link
G ACTR5 actin related protein 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520
JBrowse link
G ACTR6 actin related protein 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:100,200,815...100,224,424
Ensembl chr12:100,199,122...100,241,865
JBrowse link
G ACTR8 actin related protein 8 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:53,858,992...53,882,160
Ensembl chr 3:53,867,066...53,882,152
JBrowse link
G ARID1A AT-rich interaction domain 1A involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
IDA
(PMID:21873635)
(MGI:3789431|PMID:18448678)
(PMID:11726552)
InterPro
GO_Central
MGI
BHF-UCL
PMID:11726552 PMID:18448678 PMID:21873635 GO_REF:0000002 MGI:3789431 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G ARID1B AT-rich interaction domain 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779
JBrowse link
G ASH1L ASH1 like histone lysine methyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:155,335,263...155,563,160
Ensembl chr 1:155,335,268...155,563,162
JBrowse link
G ATRX ATRX chromatin remodeler involved_in IDA (PMID:20651253) UniProt PMID:20651253 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BAZ1A bromodomain adjacent to zinc finger domain 1A involved_in TAS (PMID:10662543), (PMID:27328812) BHF-UCL PMID:10662543 PMID:27328812 NCBI chr14:34,752,731...34,875,360
Ensembl chr14:34,752,731...34,875,647
JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B involved_in
acts_upstream_of_or_within
TAS
ISO
(PMID:29021563)
(MGI:2179578|PMID:11980720)
BHF-UCL
MGI
PMID:11980720 PMID:29021563 MGI:2179578 NCBI chr 7:73,440,406...73,522,293
Ensembl chr 7:73,440,406...73,522,293
JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A involved_in
acts_upstream_of_or_within
NAS
ISO
(PMID:11532953)
(MGI:2149896|PMID:11532953)
UniProt
MGI
PMID:11532953 MGI:2149896 NCBI chr12:56,595,596...56,636,816
Ensembl chr12:56,595,596...56,636,816
JBrowse link
G BAZ2B bromodomain adjacent to zinc finger domain 2B involved_in TAS (PMID:28801535) BHF-UCL PMID:28801535 NCBI chr 2:159,315,312...159,712,442
Ensembl chr 2:159,318,979...159,616,569
JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in IDA (PMID:14609955) HGNC-UCL PMID:14609955 NCBI chr17:67,825,503...67,984,378
Ensembl chr17:67,825,503...67,984,378
JBrowse link
G BRD4 bromodomain containing 4 involved_in IDA (PMID:23728299) UniProt PMID:23728299 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G BRDT bromodomain testis associated involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2668282|PMID:12861021) UniProt
MGI
RGD
PMID:12861021 PMID:22215678 GO_REF:0000024 MGI:2668282 RGD:9586361 NCBI chr 1:91,949,371...92,014,428
Ensembl chr 1:91,949,343...92,014,426
JBrowse link
G CBX3 chromobox 3 involved_in NAS (PMID:8663349) UniProt PMID:8663349 NCBI chr 7:26,201,443...26,213,607
Ensembl chr 7:26,201,162...26,213,607
JBrowse link
G CECR2 CECR2 histone acetyl-lysine reader acts_upstream_of_or_within
involved_in
IDA
IEA
IBA
(PMID:15640247)
(PMID:21873635)
MGI
InterPro
GO_Central
PMID:15640247 PMID:21873635 GO_REF:0000002 NCBI chr22:17,359,949...17,558,151
Ensembl chr22:17,359,949...17,558,151
JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 acts_upstream_of_or_within ISO (MGI:3616364|PMID:16415155) MGI PMID:16415155 MGI:3616364 NCBI chr 5:98,853,985...98,929,772
Ensembl chr 5:98,853,985...98,929,007
JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IDA
IEA
IBA
(PMID:19661379)
(PMID:21873635)
UniProt
InterPro
GO_Central
PMID:19661379 PMID:21873635 GO_REF:0000002 NCBI chr 1:147,172,747...147,295,762
Ensembl chr 1:147,242,654...147,295,765
JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 involved_in IMP (PMID:30397230) UniProt PMID:30397230 NCBI chr17:7,884,764...7,912,755
Ensembl chr17:7,884,796...7,912,760
JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5694290|PMID:26102480) Ensembl
MGI
PMID:26102480 GO_REF:0000107 MGI:5694290 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in IMP (PMID:18378692) UniProt PMID:18378692 NCBI chr14:21,385,199...21,456,123
Ensembl chr14:21,385,194...21,456,126
JBrowse link
G CHRAC1 chromatin accessibility complex subunit 1 involved_in NAS (PMID:10880450) UniProt PMID:10880450 NCBI chr 8:140,511,322...140,517,154
Ensembl chr 8:140,511,311...140,517,154
JBrowse link
G DAXX death domain associated protein involved_in IDA (PMID:20651253) UniProt PMID:20651253 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016
JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:44,213,471...44,220,673
Ensembl chr 1:44,213,455...44,220,681
JBrowse link
G DR1 down-regulator of transcription 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:93,345,907...93,369,493
Ensembl chr 1:93,345,907...93,369,493
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IMP (PMID:29203878) UniProt PMID:29203878 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538
JBrowse link
G ESR1 estrogen receptor 1 involved_in NAS (PMID:12351687) UniProt PMID:12351687 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISS (PMID:19026781) ARUK-UCL PMID:19026781 NCBI chr17:42,700,275...42,745,078
Ensembl chr17:42,700,275...42,745,049
JBrowse link
G FOXA1 forkhead box A1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXP3 forkhead box P3 involved_in NAS (PMID:16903909) UniProt PMID:16903909 NCBI chr  X:49,250,436...49,264,932
Ensembl chr  X:49,250,438...49,270,477
JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3046385|PMID:15087456) Ensembl
MGI
PMID:15087456 GO_REF:0000107 MGI:3046385 NCBI chr10:8,045,420...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G GATAD1 GATA zinc finger domain containing 1 involved_in IDA (PMID:20850016) GO_Central PMID:20850016 NCBI chr 7:92,447,448...92,494,631
Ensembl chr 7:92,447,482...92,460,075
JBrowse link
G GATAD2B GATA zinc finger domain containing 2B involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr 1:153,804,725...153,923,953
Ensembl chr 1:153,789,030...153,923,360
JBrowse link
G H1-9P H1.9 linker histone, pseudogene involved_in NAS (PMID:12920187) UniProt PMID:12920187 NCBI chr17:50,171,428...50,172,476
Ensembl chr17:50,171,428...50,181,178
JBrowse link
G HCFC1 host cell factor C1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:153,947,556...153,972,360
Ensembl chr  X:153,947,557...153,971,818
JBrowse link
G HCFC2 host cell factor C2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:104,064,526...104,108,954
Ensembl chr12:104,064,531...104,106,524
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IC
HDA
(PMID:16762839), (PMID:17827154)
(PMID:16217013)
BHF-UCL
UniProt
PMID:16217013 PMID:16762839 PMID:17827154 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HDAC2 histone deacetylase 2 involved_in IC
HDA
(PMID:17827154)
(PMID:16217013)
BHF-UCL
UniProt
PMID:16217013 PMID:17827154 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
G HDAC4 histone deacetylase 4 involved_in IDA (PMID:18850004) BHF-UCL PMID:18850004 NCBI chr 2:239,048,168...239,401,649
Ensembl chr 2:239,048,168...239,401,654
JBrowse link
G HDAC5 histone deacetylase 5 involved_in TAS (PMID:10220385) PINC PMID:10220385 NCBI chr17:44,076,753...44,123,651
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3699537|PMID:11733582) Ensembl
MGI
PMID:11733582 GO_REF:0000107 MGI:3699537 NCBI chr12:120,977,683...121,002,512
Ensembl chr12:120,978,543...121,002,512
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr14:21,209,147...21,269,442
Ensembl chr14:21,209,136...21,269,494
JBrowse link
G INO80 INO80 complex ATPase subunit involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000104 NCBI chr15:40,978,880...41,117,778
Ensembl chr15:40,978,880...41,116,280
JBrowse link
G INO80B INO80 complex subunit B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944
JBrowse link
G INO80B-WBP1 INO80B-WBP1 readthrough (NMD candidate) involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:74,455,023...74,460,891
Ensembl chr 2:74,455,088...74,460,884
JBrowse link
G INO80C INO80 complex subunit C involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979
JBrowse link
G INO80E INO80 complex subunit E involved_in IEA InterPro GO_REF:0000002 NCBI chr16:29,995,690...30,005,791
Ensembl chr16:29,995,715...30,005,793
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:15,245,975...15,522,042
Ensembl chr 6:15,246,069...15,522,042
JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in TAS (PMID:8552087) PINC PMID:8552087 NCBI chr17:42,113,111...42,121,367
Ensembl chr17:42,113,111...42,121,367
JBrowse link
G KAT2B lysine acetyltransferase 2B involved_in IDA
NAS
(PMID:17707232)
(PMID:10365964)
UniProt PMID:10365964 PMID:17707232 NCBI chr 3:20,040,407...20,154,404
Ensembl chr 3:20,040,446...20,154,404
JBrowse link
G KDM4A lysine demethylase 4A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:43,650,149...43,705,518
Ensembl chr 1:43,650,149...43,705,518
JBrowse link
G KDM4B lysine demethylase 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:4,969,087...5,153,603
Ensembl chr19:4,969,113...5,153,598
JBrowse link
G KDM4C lysine demethylase 4C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:6,720,863...7,175,648
Ensembl chr 9:6,720,863...7,175,648
JBrowse link
G KDM4D lysine demethylase 4D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519
JBrowse link
G KDM4E lysine demethylase 4E involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:95,025,258...95,027,596
Ensembl chr11:95,025,258...95,027,596
JBrowse link
G KDM4F lysine demethylase 4F involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:95,049,080...95,051,457
Ensembl chr11:95,049,422...95,051,338
JBrowse link
G KDM5A lysine demethylase 5A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:280,057...389,320
Ensembl chr12:280,057...389,320
JBrowse link
G KDM5B lysine demethylase 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:202,724,495...202,809,470
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G KDM5C lysine demethylase 5C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:53,176,277...53,225,207
Ensembl chr  X:53,191,321...53,225,422
JBrowse link
G KDM5D lysine demethylase 5D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  Y:19,703,865...19,745,341
Ensembl chr  Y:19,703,865...19,744,939
JBrowse link
G KDM6A lysine demethylase 6A involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:44,873,182...45,112,779
Ensembl chr  X:44,873,188...45,112,779
JBrowse link
G KDM6B lysine demethylase 6B involved_in ISS UniProt GO_REF:0000024 NCBI chr17:7,834,210...7,854,796
Ensembl chr17:7,834,217...7,854,796
JBrowse link
G KLF1 Kruppel like factor 1 acts_upstream_of_or_within ISO (MGI:3056025|PMID:15489291) MGI PMID:15489291 MGI:3056025 NCBI chr19:12,884,422...12,887,201
Ensembl chr19:12,884,422...12,887,201
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr18:54,151,606...54,224,669
Ensembl chr18:54,151,606...54,224,669
JBrowse link
G MBD3 methyl-CpG binding domain protein 3 involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr19:1,573,596...1,592,865
Ensembl chr19:1,573,596...1,592,865
JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (MGI:3616364|PMID:16415155)
(MGI:3616131|PMID:15044367)
MGI PMID:15044367 PMID:16415155 MGI:3616131 MGI:3616364 NCBI chr11:64,803,514...64,811,294
Ensembl chr11:64,803,510...64,811,294
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IDA (PMID:23260667) UniProt PMID:23260667 NCBI chr22:30,925,130...30,968,774
Ensembl chr22:30,925,130...30,968,774
JBrowse link
G MPND MPN domain containing involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:4,343,562...4,360,084
Ensembl chr19:4,343,527...4,360,086
JBrowse link
G MTA2 metastasis associated 1 family member 2 involved_in HDA (PMID:16217013) UniProt PMID:16217013 NCBI chr11:62,593,214...62,601,865
Ensembl chr11:62,593,214...62,601,865
JBrowse link
G MYB MYB proto-oncogene, transcription factor involved_in IMP (PMID:20484083) UniProt PMID:20484083 NCBI chr 6:135,181,308...135,219,172
Ensembl chr 6:135,181,308...135,219,173
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in IDA (PMID:21533051) UniProt PMID:21533051 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYSM1 Myb like, SWIRM and MPN domains 1 involved_in IMP
IBA
(PMID:17707232)
(PMID:21873635)
UniProt
GO_Central
PMID:17707232 PMID:21873635 NCBI chr 1:58,654,739...58,700,091
Ensembl chr 1:58,643,440...58,700,077
JBrowse link
G NPM1 nucleophosmin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
JBrowse link
G NPM2 nucleophosmin/nucleoplasmin 2 involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
(PMID:12714744)
(MGI:2662932|PMID:12714744)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:12714744 PMID:21873635 MGI:2662932 NCBI chr 8:22,023,308...22,036,908
Ensembl chr 8:22,024,125...22,036,897
JBrowse link
G NPM3 nucleophosmin/nucleoplasmin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:101,781,325...101,783,413
Ensembl chr10:101,781,325...101,783,413
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 involved_in ISO PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G NUDT5 nudix hydrolase 5 involved_in IDA (PMID:27257257) UniProt PMID:27257257 NCBI chr10:12,165,330...12,195,891
Ensembl chr10:12,165,330...12,196,144
JBrowse link
G PABPC1L poly(A) binding protein cytoplasmic 1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5688228|PMID:26134869) Ensembl
MGI
PMID:26134869 GO_REF:0000107 MGI:5688228 NCBI chr20:44,910,060...44,939,316
Ensembl chr20:44,910,060...44,959,035
JBrowse link
G PADI4 peptidyl arginine deiminase 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:17,308,195...17,364,004
Ensembl chr 1:17,308,195...17,364,004
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IDA (PMID:23260667) UniProt PMID:23260667 NCBI chr11:77,322,017...77,514,957
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:5440096|PMID:23070814) MGI PMID:23070814 MGI:5440096 NCBI chr 1:18,630,846...18,748,866
Ensembl chr 1:18,630,846...18,748,866
JBrowse link
G PBRM1 polybromo 1 involved_in IEA
IBA
TAS
(PMID:21873635)
(PMID:11078522)
InterPro
GO_Central
UniProt
PMID:11078522 PMID:21873635 GO_REF:0000002 NCBI chr 3:52,545,367...52,685,913
Ensembl chr 3:52,545,352...52,685,917
JBrowse link
G PIH1D1 PIH1 domain containing 1 involved_in IMP (PMID:22368283) UniProt PMID:22368283 NCBI chr19:49,446,298...49,452,392
Ensembl chr19:49,446,298...49,453,497
JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in TAS (PMID:19149898) BHF-UCL PMID:19149898 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436
JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IDA
HDA
(PMID:14609955)
(PMID:16217013)
HGNC-UCL
UniProt
PMID:14609955 PMID:16217013 NCBI chr 1:32,651,208...32,686,211
Ensembl chr 1:32,651,142...32,686,211
JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683041|PMID:14645126) Ensembl
MGI
PMID:14645126 GO_REF:0000107 MGI:2683041 NCBI chr 1:8,352,404...8,817,640
Ensembl chr 1:8,352,397...8,848,921
JBrowse link
G RSF1 remodeling and spacing factor 1 involved_in IDA (PMID:9836642) UniProt PMID:9836642 NCBI chr11:77,660,009...77,872,232
Ensembl chr11:77,660,009...77,820,869
JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:128,064,611...128,153,914
Ensembl chr 3:128,064,778...128,153,914
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IMP
IBA
(PMID:23637611)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:23637611 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970
JBrowse link
G SATB1 SATB homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:5295905|PMID:21930775)
(PMID:21873635)
InterPro
MGI
GO_Central
PMID:21873635 PMID:21930775 GO_REF:0000002 MGI:5295905 NCBI chr 3:18,345,377...18,445,592
Ensembl chr 3:18,345,377...18,445,588
JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:3793380|PMID:18255031)
(PMID:21873635)
InterPro
MGI
GO_Central
PMID:18255031 PMID:21873635 GO_REF:0000002 MGI:3793380 NCBI chr 2:199,269,500...199,471,266
Ensembl chr 2:199,269,500...199,471,266
JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703453|PMID:17215307) Ensembl
MGI
PMID:17215307 GO_REF:0000107 MGI:3703453 NCBI chr 1:41,027,202...41,242,306
Ensembl chr 1:41,027,200...41,242,154
JBrowse link
G SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in IDA
IEA
(PMID:14609955) HGNC-UCL
InterPro
PMID:14609955 GO_REF:0000002 NCBI chr  X:129,446,501...129,523,520
Ensembl chr  X:129,446,501...129,523,500
JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in
NOT|involved_in
TAS
IBA
IMP
IEA
(PMID:17938176)
(PMID:21873635)
(PMID:22368283)
BHF-UCL
GO_Central
UniProt
InterPro
PMID:17938176 PMID:21873635 PMID:22368283 GO_REF:0000002 NCBI chr 9:2,015,347...2,193,624
Ensembl chr 9:1,980,290...2,193,624
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in
acts_upstream_of_or_within
IC
HDA
IBA
IEA
ISO
IDA
IMP
(PMID:18816825)
(PMID:16217013)
(PMID:21873635)
(MGI:3610843|PMID:16287714)
(PMID:10943845), (PMID:11726552)
(PMID:22368283)
BHF-UCL
UniProt
GO_Central
InterPro
MGI
RGD
PMID:9001244 PMID:10943845 PMID:11726552 PMID:16217013 PMID:16287714 More... GO_REF:0000002 MGI:3610843 RGD:634124 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in
acts_upstream_of_or_within
IDA
IMP
IBA
ISO
(PMID:9836642)
(PMID:15543136)
(PMID:21873635)
(MGI:2179578|PMID:11980720)
(MGI:2149896|PMID:11532953)
UniProt
BHF-UCL
GO_Central
MGI
PMID:9836642 PMID:11532953 PMID:11980720 PMID:15543136 PMID:21873635 MGI:2149896 MGI:2179578 NCBI chr 4:143,513,501...143,557,486
Ensembl chr 4:143,513,702...143,557,486
JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in NAS
IBA
IMP
(PMID:21549307)
(PMID:21873635)
(PMID:22960744)
UniProt
GO_Central
PMID:21549307 PMID:21873635 PMID:22960744 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in IMP
HDA
IEA
IDA
(PMID:22368283)
(PMID:16217013)
(PMID:11726552)
UniProt
InterPro
BHF-UCL
PMID:11726552 PMID:16217013 PMID:22368283 GO_REF:0000002 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009
JBrowse link
G SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 involved_in IDA
HDA
IBA
(PMID:10078207), (PMID:11018012), (PMID:11726552)
(PMID:16217013)
(PMID:21873635)
UniProt
GO_Central
PMID:10078207 PMID:11018012 PMID:11726552 PMID:16217013 PMID:21873635 NCBI chr 3:47,585,269...47,781,893
Ensembl chr 3:47,585,269...47,782,106
JBrowse link
G SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 involved_in IDA
IBA
HDA
(PMID:10078207), (PMID:11018012), (PMID:11726552)
(PMID:21873635)
(PMID:16217013)
UniProt
GO_Central
PMID:10078207 PMID:11018012 PMID:11726552 PMID:16217013 PMID:21873635 NCBI chr12:56,162,359...56,189,504
Ensembl chr12:56,162,359...56,189,567
JBrowse link
G SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in IDA
IMP
(PMID:11726552)
(PMID:12917342)
BHF-UCL
UniProt
PMID:11726552 PMID:12917342 NCBI chr12:50,085,236...50,100,707
Ensembl chr12:50,085,200...50,100,707
JBrowse link
G SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in IDA
HDA
IEA
(PMID:11726552)
(PMID:16217013)
BHF-UCL
UniProt
InterPro
PMID:11726552 PMID:16217013 GO_REF:0000002 NCBI chr17:63,832,081...63,842,685
Ensembl chr17:63,832,081...63,843,065
JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in IDA
IC
(PMID:11726552)
(PMID:18816825)
BHF-UCL PMID:11726552 PMID:18816825 NCBI chr 7:151,238,780...151,277,452
Ensembl chr 7:151,238,764...151,277,896
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in IDA
IEA
HDA
(PMID:11726552)
(PMID:16217013)
BHF-UCL
InterPro
UniProt
PMID:11726552 PMID:16217013 GO_REF:0000002 NCBI chr17:40,624,962...40,647,818
Ensembl chr17:40,624,962...40,648,654
JBrowse link
G SMYD1 SET and MYND domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178868|PMID:11923873) Ensembl
MGI
PMID:11923873 GO_REF:0000107 MGI:2178868 NCBI chr 2:88,067,825...88,113,384
Ensembl chr 2:88,067,825...88,113,384
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IDA (PMID:20484372) UniProt PMID:20484372 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G SRCAP Snf2 related CREBBP activator protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:30,699,171...30,741,409
Ensembl chr16:30,698,209...30,741,409
JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase involved_in IDA (PMID:10949293) UniProt PMID:10949293 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315
JBrowse link
G TADA2A transcriptional adaptor 2A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,406,877...37,479,725
Ensembl chr17:37,406,886...37,479,725
JBrowse link
G TADA2B transcriptional adaptor 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:7,043,372...7,057,952
Ensembl chr 4:7,041,899...7,057,952
JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like involved_in TAS (PMID:9674425) PINC PMID:9674425 NCBI chr11:62,771,396...62,787,342
Ensembl chr11:62,771,357...62,787,342
JBrowse link
G TNP1 transition protein 1 involved_in IDA
IBA
(PMID:12743712)
(PMID:21873635)
UniProt
GO_Central
PMID:12743712 PMID:21873635 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
G TOP1 DNA topoisomerase I involved_in IMP
IBA
(PMID:22904072)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:22904072 NCBI chr20:41,028,822...41,124,487
Ensembl chr20:41,028,822...41,124,487
JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5295905|PMID:21930775) Ensembl
MGI
PMID:21930775 GO_REF:0000107 MGI:5295905 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276
JBrowse link
G TTF1 transcription termination factor 1 acts_upstream_of_or_within ISO (MGI:85982|PMID:9049305) MGI PMID:9049305 MGI:85982 NCBI chr 9:132,375,548...132,406,840
Ensembl chr 9:132,375,548...132,406,851
JBrowse link
G TTI1 TELO2 interacting protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:37,983,014...38,033,461
Ensembl chr20:37,983,007...38,033,461
JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IMP (PMID:24657165) UniProt PMID:24657165 NCBI chr14:64,504,726...64,533,693
Ensembl chr14:64,503,712...64,533,690
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IMP (PMID:26816381) UniProt PMID:26816381 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899
JBrowse link
chromosome breakage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:19549901) UniProt PMID:19549901 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:74,621,396...74,666,892
Ensembl chr16:74,621,399...74,666,877
JBrowse link
chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 involved_in TAS (PMID:18309324) UniProt PMID:18309324 NCBI chr  X:130,129,362...130,165,841
Ensembl chr  X:130,124,666...130,165,879
JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:66,002,079...66,004,149
Ensembl chr11:66,002,228...66,004,149
JBrowse link
G BANF2 BANF family member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:17,693,672...17,735,872
Ensembl chr20:17,693,672...17,735,871
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:15695611 GO_REF:0000107 RGD:2301352 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852
JBrowse link
G H1-0 H1.0 linker histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:37,805,229...37,807,432
Ensembl chr22:37,805,229...37,807,432
JBrowse link
G H1-1 H1.1 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,017,032...26,017,787
Ensembl chr 6:26,017,032...26,017,787
JBrowse link
G H1-10 H1.10 linker histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:129,314,771...129,316,286
Ensembl chr 3:129,314,771...129,316,286
JBrowse link
G H1-2 H1.2 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,055,740...26,056,470
Ensembl chr 6:26,055,740...26,056,470
JBrowse link
G H1-3 H1.3 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,234,212...26,234,987
Ensembl chr 6:26,234,212...26,234,987
JBrowse link
G H1-4 H1.4 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,156,329...26,157,115
Ensembl chr 6:26,156,329...26,157,115
JBrowse link
G H1-5 H1.5 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,866,792...27,867,588
Ensembl chr 6:27,866,792...27,867,588
JBrowse link
G H1-6 H1.6 linker histone, cluster member involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,107,412...26,108,135
Ensembl chr 6:26,107,412...26,108,135
JBrowse link
G H1-7 H1.7 linker histone involved_in IEA UniProt GO_REF:0000043 NCBI chr12:48,328,980...48,330,279
Ensembl chr12:48,328,980...48,330,279
JBrowse link
G H1-8 H1.8 linker histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:129,543,175...129,555,185
Ensembl chr 3:129,543,175...129,551,467
JBrowse link
G H1-9P H1.9 linker histone, pseudogene involved_in IBA
IDA
(PMID:21873635)
(PMID:12920187)
GO_Central
UniProt
PMID:12920187 PMID:21873635 NCBI chr17:50,171,428...50,172,476
Ensembl chr17:50,171,428...50,181,178
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G NCAPG2 non-SMC condensin II complex subunit G2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:158,631,169...158,704,816
Ensembl chr 7:158,631,169...158,704,804
JBrowse link
G NCAPH2 non-SMC condensin II complex subunit H2 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:50,508,218...50,524,780
Ensembl chr22:50,508,224...50,524,780
JBrowse link
G PRM1 protamine 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:11,280,841...11,281,330
Ensembl chr16:11,280,841...11,281,330
JBrowse link
G PRM2 protamine 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:11,275,639...11,276,480
Ensembl chr16:11,275,639...11,276,480
JBrowse link
G PRM3 protamine 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:11,273,199...11,273,629
Ensembl chr16:11,273,199...11,273,629
JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5882483|PMID:26919979) Ensembl
MGI
PMID:26919979 GO_REF:0000107 MGI:5882483 NCBI chr 9:70,258,962...70,354,873
Ensembl chr 9:70,258,978...70,354,873
JBrowse link
G TOP2A DNA topoisomerase II alpha acts_upstream_of_or_within ISO (MGI:2158879|PMID:11835580) MGI PMID:11835580 MGI:2158879 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase acts_upstream_of_or_within ISO (MGI:83357|PMID:8843194) MGI PMID:8843194 MGI:83357 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,223,044...108,369,102
JBrowse link
G ATRX ATRX chromatin remodeler involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3052396|PMID:15242786) Ensembl
MGI
PMID:15242786 GO_REF:0000107 MGI:3052396 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G CCNE1 cyclin E1 acts_upstream_of_or_within ISO (MGI:5698037|PMID:24586195) MGI PMID:24586195 MGI:5698037 NCBI chr19:29,811,991...29,824,312
Ensembl chr19:29,811,991...29,824,312
JBrowse link
G CCNE2 cyclin E2 acts_upstream_of_or_within ISO (MGI:5698037|PMID:24586195) MGI PMID:24586195 MGI:5698037 NCBI chr 8:94,880,224...94,896,671
Ensembl chr 8:94,879,770...94,896,678
JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,509,154...38,570,286
Ensembl chr22:38,518,948...38,570,204
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in ISS UniProt GO_REF:0000024 NCBI chr17:44,656,417...44,677,086
Ensembl chr17:44,656,404...44,690,308
JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3831647|PMID:19001091)
GO_Central
MGI
PMID:19001091 PMID:21873635 MGI:3831647 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5442243|PMID:22778135)
GO_Central
MGI
PMID:21873635 PMID:22778135 MGI:5442243 NCBI chr15:40,694,774...40,732,340
Ensembl chr15:40,694,774...40,732,340
JBrowse link
cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAU2 MAU2 sister chromatid cohesion factor involved_in IDA (PMID:22628566) UniProt PMID:22628566 NCBI chr19:19,320,607...19,358,754
Ensembl chr19:19,320,829...19,358,754
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IDA (PMID:22628566) UniProt PMID:22628566 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
deactivation of mitotic spindle assembly checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in IMP (PMID:22581055) CAFA PMID:22581055 NCBI chr16:88,803,789...88,809,258
Ensembl chr16:88,803,789...88,809,258
JBrowse link
G MAD1L1 mitotic arrest deficient 1 like 1 involved_in IDA (PMID:19010891) UniProt PMID:19010891 NCBI chr 7:1,815,795...2,232,945
Ensembl chr 7:1,815,793...2,233,243
JBrowse link
G MAD2L1BP MAD2L1 binding protein involved_in IMP (PMID:18022368) UniProt PMID:18022368 NCBI chr 6:43,629,540...43,640,941
Ensembl chr 6:43,629,540...43,640,941
JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in IDA (PMID:24374861) UniProt PMID:24374861 NCBI chr10:133,347,373...133,352,683
Ensembl chr10:133,347,368...133,352,683
JBrowse link
DNA conformation change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA (PMID:9558345) ARUK-UCL PMID:9558345 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in IDA (PMID:18755198) BHF-UCL PMID:18755198 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC006064.6 novel transcript involved_in IEA GOC GO_REF:0000108 Ensembl chr12:6,556,886...6,607,367 JBrowse link
G AL035461.3 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr20:5,950,949...6,039,856 JBrowse link
G ANXA1 annexin A1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:20655937 PMID:21873635 RGD:7421590 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,393
JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 involved_in IDA (PMID:22055184) UniProt PMID:22055184 NCBI chr 6:100,508,194...100,884,455
Ensembl chr 6:100,508,194...100,881,372
JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA GOC GO_REF:0000108 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G BLM BLM RecQ like helicase involved_in IDA
IBA
IEA
(PMID:11735402), (PMID:24816114), (PMID:25901030)
(PMID:21873635)
BHF-UCL
GO_Central
GOC
PMID:11735402 PMID:21873635 PMID:24816114 PMID:25901030 GO_REF:0000108 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr17:61,679,139...61,864,120
Ensembl chr17:61,679,139...61,863,559
JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:98,853,985...98,929,772
Ensembl chr 5:98,853,985...98,929,007
JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IEA GOC GO_REF:0000108 NCBI chr 1:147,172,747...147,295,762
Ensembl chr 1:147,242,654...147,295,765
JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr15:92,900,324...93,027,996
Ensembl chr15:92,900,189...93,027,996
JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 involved_in IEA GOC GO_REF:0000108 NCBI chr17:7,884,764...7,912,755
Ensembl chr17:7,884,796...7,912,760
JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in IEA GOC GO_REF:0000108 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524
JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:6,101,787...6,180,321
Ensembl chr 1:6,101,787...6,180,321
JBrowse link
G CHD6 chromodomain helicase DNA binding protein 6 involved_in IEA GOC GO_REF:0000108 NCBI chr20:41,402,083...41,618,377
Ensembl chr20:41,402,083...41,618,384
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G CHD8 chromodomain helicase DNA binding protein 8 involved_in IEA GOC GO_REF:0000108 NCBI chr14:21,385,199...21,456,123
Ensembl chr14:21,385,194...21,456,126
JBrowse link
G CHD9 chromodomain helicase DNA binding protein 9 involved_in IEA GOC GO_REF:0000108 NCBI chr16:53,054,982...53,327,502
Ensembl chr16:53,054,991...53,329,150
JBrowse link
G CHTF18 chromosome transmission fidelity factor 18 involved_in IEA GOC GO_REF:0000108 NCBI chr16:788,620...798,074
Ensembl chr16:788,046...800,737
JBrowse link
G CHTF8 chromosome transmission fidelity factor 8 involved_in IEA GOC GO_REF:0000108 NCBI chr16:69,118,010...69,132,588
Ensembl chr16:69,118,010...69,132,588
JBrowse link
G DDX1 DEAD-box helicase 1 involved_in IDA (PMID:18710941) UniProt PMID:18710941 NCBI chr 2:15,591,868...15,631,101
Ensembl chr 2:15,591,178...15,634,346
JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in IDA
IEA
IBA
(PMID:10648783), (PMID:18499658), (PMID:26503245)
(PMID:21873635)
UniProt
GOC
GO_Central
PMID:10648783 PMID:18499658 PMID:21873635 PMID:26503245 GO_REF:0000108 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799
JBrowse link
G DDX11L8 DEAD/H-box helicase 11 like 8 (pseudogene) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,310...14,526
Ensembl chr12:12,310...13,501
JBrowse link
G DDX12P DEAD/H-box helicase 12, pseudogene involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:9,417,691...9,448,172
Ensembl chr12:9,418,673...9,448,229
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA GOC GO_REF:0000108 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA
ISS
IMP
(PMID:21561811), (PMID:9111062)
(PMID:12711669)
UniProt PMID:9111062 PMID:12711669 PMID:21561811 GO_REF:0000024 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA GOC GO_REF:0000108 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G DQX1 DEAQ-box RNA dependent ATPase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:74,518,131...74,526,231
Ensembl chr 2:74,518,131...74,526,281
JBrowse link
G DSCC1 DNA replication and sister chromatid cohesion 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:119,833,960...119,855,920
Ensembl chr 8:119,833,976...119,855,894
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA GOC GO_REF:0000108 NCBI chr19:45,349,837...45,370,647
Ensembl chr19:45,349,837...45,370,918
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA GOC GO_REF:0000108 NCBI chr 2:127,257,290...127,294,166
Ensembl chr 2:127,257,290...127,294,166
JBrowse link
G ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GOC GO_REF:0000108 NCBI chr  X:72,204,665...72,239,027
Ensembl chr  X:72,204,657...72,239,027
JBrowse link
G FANCM FA complementation group M involved_in IEA GOC GO_REF:0000108 NCBI chr14:45,135,930...45,200,890
Ensembl chr14:45,135,930...45,200,890
JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594
JBrowse link
G G3BP1 G3BP stress granule assembly factor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:151,771,954...151,812,785
Ensembl chr 5:151,771,045...151,812,911
JBrowse link
G GTF2F2 general transcription factor IIF subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr13:45,119,830...45,284,893
Ensembl chr13:45,120,510...45,284,893
JBrowse link
G HELB DNA helicase B involved_in IEA GOC GO_REF:0000108 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,493...66,343,643
JBrowse link
G HELQ helicase, POLQ like involved_in IEA GOC GO_REF:0000108 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855
JBrowse link
G HFM1 helicase for meiosis 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:91,260,766...91,408,008
Ensembl chr 1:91,260,766...91,404,856
JBrowse link
G IGHMBP2 immunoglobulin mu DNA binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr11:68,903,855...68,940,601
Ensembl chr11:68,903,863...68,940,602
JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:52,264,015...52,284,742
Ensembl chr 6:52,264,014...52,284,881
JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:47,960,941...47,978,160
Ensembl chr 8:47,960,185...47,978,160
JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr22:35,400,133...35,454,942
Ensembl chr22:35,400,134...35,425,431
JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,728...100,101,940
JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA InterPro GO_REF:0000002 NCBI chr20:5,950,652...6,000,941
Ensembl chr20:5,950,652...5,998,977
JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IMP
IEA
(PMID:26300262) UniProt
InterPro
PMID:26300262 GO_REF:0000002 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162
JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:66,870,757...66,926,436
Ensembl chr 8:66,870,749...66,922,048
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IMP (PMID:15790808) BHF-UCL PMID:15790808 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,570...94,493,885
JBrowse link
G NAV2 neuron navigator 2 involved_in IEA GOC GO_REF:0000108 NCBI chr11:19,345,200...20,121,601
Ensembl chr11:19,350,724...20,121,601
JBrowse link
G NBN nibrin involved_in IMP
IBA
(PMID:15790808)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:15790808 PMID:21873635 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,331...90,003,228
JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:64,815,632...64,827,173
Ensembl chr15:64,815,632...64,825,668
JBrowse link
G POLQ DNA polymerase theta involved_in IEA GOC GO_REF:0000108 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988
JBrowse link
G POT1 protection of telomeres 1 involved_in IDA (PMID:16030011) BHF-UCL PMID:16030011 NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983
JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IMP
IBA
(PMID:15790808)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:15790808 PMID:21873635 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G RAD54B RAD54 homolog B involved_in IEA GOC GO_REF:0000108 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115
JBrowse link
G RAD54L RAD54 like involved_in IEA GOC GO_REF:0000108 NCBI chr 1:46,247,688...46,278,477
Ensembl chr 1:46,246,461...46,278,480
JBrowse link
G RAD54L2 RAD54 like 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:51,538,719...51,668,660
Ensembl chr 3:51,538,719...51,668,667
JBrowse link
G RECQL RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669
JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IDA
IBA
IEA
TAS
(PMID:19177149)
(PMID:21873635)
(PMID:22039056)
UniProt
GO_Central
GOC
BHF-UCL
PMID:19177149 PMID:21873635 PMID:22039056 GO_REF:0000108 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845
JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IEA
IBA
(PMID:21873635) GOC
GO_Central
PMID:21873635 GO_REF:0000108 NCBI chr17:75,626,845...75,667,202
Ensembl chr17:75,626,845...75,667,189
JBrowse link
G RFC2 replication factor C subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:74,231,502...74,254,452
Ensembl chr 7:74,231,499...74,254,458
JBrowse link
G RFC3 replication factor C subunit 3 involved_in IEA GOC GO_REF:0000108 NCBI chr13:33,818,075...33,973,946
Ensembl chr13:33,818,069...33,966,558
JBrowse link
G RFC4 replication factor C subunit 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:186,789,900...186,806,482
Ensembl chr 3:186,789,880...186,807,058
JBrowse link
G RFC5 replication factor C subunit 5 involved_in IEA GOC GO_REF:0000108 NCBI chr12:118,016,661...118,033,564
Ensembl chr12:118,013,588...118,033,130
JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISS
IBA
IEA
(PMID:24115439)
(PMID:21873635)
BHF-UCL
GO_Central
GOC
PMID:21873635 PMID:24115439 GO_REF:0000108 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253
JBrowse link
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) involved_in IEA GOC GO_REF:0000108 NCBI chr20:63,657,810...63,698,698
Ensembl chr20:63,659,300...63,698,684
JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:128,064,611...128,153,914
Ensembl chr 3:128,064,778...128,153,914
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970
JBrowse link
G SETX senataxin involved_in IEA GOC GO_REF:0000108 NCBI chr 9:132,261,356...132,356,726
Ensembl chr 9:132,261,356...132,354,986
JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IMP (PMID:12466530) UniProt PMID:12466530 NCBI chr10:69,180,234...69,209,093
Ensembl chr10:69,180,234...69,209,099
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5637600|PMID:25848017) Ensembl
MGI
PMID:25848017 GO_REF:0000107 MGI:5637600 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
G TWNK twinkle mtDNA helicase involved_in IEA GOC GO_REF:0000108 NCBI chr10:100,987,543...100,994,403
Ensembl chr10:100,987,367...100,994,403
JBrowse link
G WRN WRN RecQ like helicase involved_in IDA
IBA
(PMID:11735402), (PMID:26420422)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:11735402 PMID:21873635 PMID:26420422 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:2,765,341...2,786,952
Ensembl chr 6:2,765,393...2,786,952
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA GOC GO_REF:0000108 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
JBrowse link
DNA geometric change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGB1 high mobility group box 1 involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:10962007 AgBase
MGI
PMID:10962007 GO_REF:0000024 RGD:8554262 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G HMGB3 high mobility group box 3 involved_in ISS AgBase GO_REF:0000024 NCBI chr  X:150,980,507...150,990,773
Ensembl chr  X:150,980,509...150,990,771
JBrowse link
G MTERF1 mitochondrial transcription termination factor 1 involved_in IDA (PMID:20550934) UniProt PMID:20550934 NCBI chr 7:91,870,929...91,880,733
Ensembl chr 7:91,692,008...91,880,702
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT3A DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611125|PMID:16322236)
(MGI:3768461|PMID:17938196)
Ensembl
MGI
PMID:16322236 PMID:17938196 GO_REF:0000107 MGI:3611125 MGI:3768461 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G DNMT3B DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:3768461|PMID:17938196) MGI PMID:17938196 MGI:3768461 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,356
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IGI (PMID:23770133) BHF-UCL PMID:23770133 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HELLS helicase, lymphoid specific involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr10:94,545,778...94,613,905
Ensembl chr10:94,501,434...94,613,905
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 involved_in IGI (PMID:23770133) BHF-UCL PMID:23770133 NCBI chr18:54,151,606...54,224,669
Ensembl chr18:54,151,606...54,224,669
JBrowse link
G MBD3 methyl-CpG binding domain protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611125|PMID:16322236) Ensembl
MGI
PMID:16322236 GO_REF:0000107 MGI:3611125 NCBI chr19:1,573,596...1,592,865
Ensembl chr19:1,573,596...1,592,865
JBrowse link
G SIRT1 sirtuin 1 involved_in TAS (PMID:21947282) UniProt PMID:21947282 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
DNA packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2BC1 H2B clustered histone 1 acts_upstream_of_or_within ISO (MGI:3702345|PMID:17261847) MGI PMID:17261847 MGI:3702345 NCBI chr 6:25,726,777...25,727,345
Ensembl chr 6:25,726,777...25,727,345
JBrowse link
G HAT1 histone acetyltransferase 1 involved_in TAS (PMID:9427644) PINC PMID:9427644 NCBI chr 2:171,922,425...171,983,686
Ensembl chr 2:171,922,448...171,983,686
JBrowse link
G KAT6A lysine acetyltransferase 6A involved_in TAS (PMID:8782817) PINC PMID:8782817 NCBI chr 8:41,929,479...42,051,988
Ensembl chr 8:41,929,479...42,051,994
JBrowse link
G NAA10 N-alpha-acetyltransferase 10, NatA catalytic subunit involved_in TAS (PMID:7981673) PINC PMID:7981673 NCBI chr  X:153,929,225...153,935,037
Ensembl chr  X:153,929,225...153,935,080
JBrowse link
G PRM1 protamine 1 involved_in TAS (PMID:2081589) PINC PMID:2081589 NCBI chr16:11,280,841...11,281,330
Ensembl chr16:11,280,841...11,281,330
JBrowse link
G PRM2 protamine 2 involved_in TAS (PMID:2081589) PINC PMID:2081589 NCBI chr16:11,275,639...11,276,480
Ensembl chr16:11,275,639...11,276,480
JBrowse link
DNA replication-dependent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASF1A anti-silencing function 1A histone chaperone involved_in IBA
IDA
(PMID:21873635)
(PMID:14718166)
GO_Central
UniProt
PMID:14718166 PMID:21873635 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171
JBrowse link
G ASF1B anti-silencing function 1B histone chaperone involved_in IBA
IDA
(PMID:21873635)
(PMID:14718166)
GO_Central
UniProt
PMID:14718166 PMID:21873635 NCBI chr19:14,119,512...14,136,589
Ensembl chr19:14,119,512...14,136,613
JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr19:4,402,596...4,448,322
Ensembl chr19:4,402,640...4,445,018
JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr21:36,380,145...36,419,015
Ensembl chr21:36,385,392...36,419,015
JBrowse link
G H3C1 H3 clustered histone 1 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,020,451...26,020,958
Ensembl chr 6:26,020,451...26,020,958
JBrowse link
G H3C10 H3 clustered histone 10 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,810,051...27,810,536
Ensembl chr 6:27,810,064...27,811,300
JBrowse link
G H3C11 H3 clustered histone 11 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,871,845...27,872,346
Ensembl chr 6:27,871,845...27,872,346
JBrowse link
G H3C12 H3 clustered histone 12 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,890,315...27,890,826
Ensembl chr 6:27,890,315...27,893,106
JBrowse link
G H3C2 H3 clustered histone 2 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,031,589...26,032,099
Ensembl chr 6:26,031,589...26,032,099
JBrowse link
G H3C3 H3 clustered histone 3 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,045,384...26,045,869
Ensembl chr 6:26,045,384...26,045,869
JBrowse link
G H3C4 H3 clustered histone 4 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,196,784...26,199,293
Ensembl chr 6:26,196,784...26,197,286
JBrowse link
G H3C6 H3 clustered histone 6 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,224,178...26,227,473
Ensembl chr 6:26,224,199...26,227,473
JBrowse link
G H3C7 H3 clustered histone 7 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,250,142...26,250,635
Ensembl chr 6:26,250,142...26,250,635
JBrowse link
G H3C8 H3 clustered histone 8 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,270,918...26,271,413
Ensembl chr 6:26,269,405...26,271,815
JBrowse link
G H4-16 H4 histone 16 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr12:14,770,720...14,771,131
Ensembl chr12:14,767,999...14,771,131
JBrowse link
G H4C1 H4 clustered histone 1 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,021,649...26,022,050
Ensembl chr 6:26,021,649...26,022,050
JBrowse link
G H4C11 H4 clustered histone 11 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,824,092...27,824,480
Ensembl chr 6:27,824,092...27,824,480
JBrowse link
G H4C12 H4 clustered histone 12 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,831,174...27,831,560
Ensembl chr 6:27,831,174...27,831,560
JBrowse link
G H4C13 H4 clustered histone 13 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,873,148...27,873,534
Ensembl chr 6:27,873,148...27,873,534
JBrowse link
G H4C14 H4 clustered histone 14 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:149,832,657...149,833,052
Ensembl chr 1:149,832,659...149,839,767
JBrowse link
G H4C15 H4 clustered histone 15 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:149,853,262...149,861,159
Ensembl chr 1:149,854,045...149,861,210
JBrowse link
G H4C2 H4 clustered histone 2 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,026,896...26,027,283
Ensembl chr 6:26,025,952...26,027,283
JBrowse link
G H4C3 H4 clustered histone 3 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,103,933...26,104,337
Ensembl chr 6:26,103,933...26,104,337
JBrowse link
G H4C4 H4 clustered histone 4 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,188,710...26,189,112
Ensembl chr 6:26,188,710...26,189,112
JBrowse link
G H4C5 H4 clustered histone 5 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,204,610...26,205,021
Ensembl chr 6:26,204,552...26,206,038
JBrowse link
G H4C6 H4 clustered histone 6 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,240,393...26,240,793
Ensembl chr 6:26,240,393...26,240,793
JBrowse link
G H4C8 H4 clustered histone 8 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,285,126...26,285,534
Ensembl chr 6:26,277,609...26,285,638
JBrowse link
G H4C9 H4 clustered histone 9 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,139,282...27,139,678
Ensembl chr 6:27,138,588...27,139,881
JBrowse link
G HAT1 histone acetyltransferase 1 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 2:171,922,425...171,983,686
Ensembl chr 2:171,922,448...171,983,686
JBrowse link
G IPO4 importin 4 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr14:24,180,219...24,188,816
Ensembl chr14:24,180,219...24,188,869
JBrowse link
G NASP nuclear autoantigenic sperm protein acts_upstream_of_or_within
involved_in
ISS
IBA
IDA
(PMID:21873635)
(PMID:14718166)
UniProt
GO_Central
PMID:14718166 PMID:21873635 GO_REF:0000024 NCBI chr 1:45,584,041...45,618,893
Ensembl chr 1:45,583,846...45,618,904
JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:32,651,208...32,686,211
Ensembl chr 1:32,651,142...32,686,211
JBrowse link
DNA replication-independent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASF1A anti-silencing function 1A histone chaperone involved_in IBA
IDA
(PMID:21873635)
(PMID:14718166)
GO_Central
UniProt
PMID:14718166 PMID:21873635 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171
JBrowse link
G ASF1B anti-silencing function 1B histone chaperone involved_in IBA
IDA
(PMID:21873635)
(PMID:14718166)
GO_Central
UniProt
PMID:14718166 PMID:21873635 NCBI chr19:14,119,512...14,136,589
Ensembl chr19:14,119,512...14,136,613
JBrowse link
G ATRX ATRX chromatin remodeler involved_in IMP (PMID:22391447) UniProt PMID:22391447 NCBI chr  X:77,504,880...77,786,235
Ensembl chr  X:77,504,880...77,786,233
JBrowse link
G CABIN1 calcineurin binding protein 1 involved_in IBA
IDA
IEA
(PMID:21873635)
(PMID:14718166)
GO_Central
UniProt
InterPro
PMID:14718166 PMID:21873635 GO_REF:0000002 NCBI chr22:24,011,192...24,178,628
Ensembl chr22:24,011,192...24,178,628
JBrowse link
G H3-3A H3.3 histone A involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,072,019
JBrowse link
G H3-3B H3.3 histone B involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr17:75,776,434...75,779,779
Ensembl chr17:75,776,434...75,785,893
JBrowse link
G H4-16 H4 histone 16 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr12:14,770,720...14,771,131
Ensembl chr12:14,767,999...14,771,131
JBrowse link
G H4C1 H4 clustered histone 1 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,021,649...26,022,050
Ensembl chr 6:26,021,649...26,022,050
JBrowse link
G H4C11 H4 clustered histone 11 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,824,092...27,824,480
Ensembl chr 6:27,824,092...27,824,480
JBrowse link
G H4C12 H4 clustered histone 12 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,831,174...27,831,560
Ensembl chr 6:27,831,174...27,831,560
JBrowse link
G H4C13 H4 clustered histone 13 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,873,148...27,873,534
Ensembl chr 6:27,873,148...27,873,534
JBrowse link
G H4C14 H4 clustered histone 14 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:149,832,657...149,833,052
Ensembl chr 1:149,832,659...149,839,767
JBrowse link
G H4C15 H4 clustered histone 15 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:149,853,262...149,861,159
Ensembl chr 1:149,854,045...149,861,210
JBrowse link
G H4C2 H4 clustered histone 2 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,026,896...26,027,283
Ensembl chr 6:26,025,952...26,027,283
JBrowse link
G H4C3 H4 clustered histone 3 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,103,933...26,104,337
Ensembl chr 6:26,103,933...26,104,337
JBrowse link
G H4C4 H4 clustered histone 4 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,188,710...26,189,112
Ensembl chr 6:26,188,710...26,189,112
JBrowse link
G H4C5 H4 clustered histone 5 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,204,610...26,205,021
Ensembl chr 6:26,204,552...26,206,038
JBrowse link
G H4C6 H4 clustered histone 6 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,240,393...26,240,793
Ensembl chr 6:26,240,393...26,240,793
JBrowse link
G H4C8 H4 clustered histone 8 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:26,285,126...26,285,534
Ensembl chr 6:26,277,609...26,285,638
JBrowse link
G H4C9 H4 clustered histone 9 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 6:27,139,282...27,139,678
Ensembl chr 6:27,138,588...27,139,881
JBrowse link
G HAT1 histone acetyltransferase 1 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 2:171,922,425...171,983,686
Ensembl chr 2:171,922,448...171,983,686
JBrowse link
G HIRA histone cell cycle regulator involved_in IDA
IBA
(PMID:14718166)
(PMID:21873635)
UniProt
GO_Central
PMID:14718166 PMID:21873635 NCBI chr22:19,330,698...19,431,733
Ensembl chr22:19,330,698...19,447,450
JBrowse link
G IPO4 importin 4 involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr14:24,180,219...24,188,816
Ensembl chr14:24,180,219...24,188,869
JBrowse link
G NASP nuclear autoantigenic sperm protein involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:45,584,041...45,618,893
Ensembl chr 1:45,583,846...45,618,904
JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IDA (PMID:14718166) UniProt PMID:14718166 NCBI chr 1:32,651,208...32,686,211
Ensembl chr 1:32,651,142...32,686,211
JBrowse link
G UBN1 ubinuclein 1 involved_in IDA
IBA
(PMID:14718166)
(PMID:21873635)
UniProt
GO_Central
PMID:14718166 PMID:21873635 NCBI chr16:4,846,665...4,882,401
Ensembl chr16:4,846,665...4,882,401
JBrowse link
G UBN2 ubinuclein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:139,228,408...139,329,421
Ensembl chr 7:139,230,356...139,308,236
JBrowse link
DNA replication-independent nucleosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:21,351,472...21,384,019
Ensembl chr14:21,351,476...21,384,019
JBrowse link
DNA rewinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IDA (PMID:21078962), (PMID:22705370) UniProt PMID:21078962 PMID:22705370 NCBI chr 2:135,196,969...135,531,218
Ensembl chr 2:135,136,916...135,531,218
JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IMP (PMID:8663148) UniProt PMID:8663148 NCBI chr 2:127,257,290...127,294,166
Ensembl chr 2:127,257,290...127,294,166
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 involved_in ISS UniProt
AgBase
GO_REF:0000024 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G TOP1 DNA topoisomerase I involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
IDA
IBA
(PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)
(MGI:3612364|PMID:16261531), (MGI:70738|PMID:7842491)
(PMID:14594810)
(PMID:21873635)
CAFA
InterPro
MGI
RGD
UniProt
GO_Central
PMID:1332866 PMID:7842491 PMID:8567649 PMID:8631793 PMID:8631794 More... GO_REF:0000002 MGI:3612364 MGI:70738 RGD:1580856 NCBI chr20:41,028,822...41,124,487
Ensembl chr20:41,028,822...41,124,487
JBrowse link
G TOP1MT DNA topoisomerase I mitochondrial involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:143,309,324...143,359,977
Ensembl chr 8:143,304,384...143,359,979
JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in
acts_upstream_of_or_within
IDA
ISO
IMP
(PMID:22323612)
(MGI:51613|PMID:1331984), (MGI:895157|PMID:9224616)
(PMID:12711669)
UniProt
MGI
RGD
PMID:1331984 PMID:9224616 PMID:11334111 PMID:12711669 PMID:22323612 MGI:51613 MGI:895157 RGD:1580614 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IDA
IEA
(PMID:10684600) UniProt
InterPro
PMID:10684600 GO_REF:0000002 GO_REF:0000104 NCBI chr 3:25,597,905...25,664,907
Ensembl chr 3:25,597,984...25,664,907
JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IEA
IBA
IDA
(PMID:21873635)
(PMID:20445207)
InterPro
GO_Central
UniProt
PMID:20445207 PMID:21873635 GO_REF:0000002 NCBI chr17:18,269,958...18,314,996
Ensembl chr17:18,271,428...18,315,007
JBrowse link
G TOP3B DNA topoisomerase III beta involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr22:21,957,025...21,982,787
Ensembl chr22:21,957,025...21,982,813
JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G HMGA1 high mobility group AT-hook 1 involved_in NAS (PMID:10428834) UniProt PMID:10428834 NCBI chr 6:34,236,873...34,246,231
Ensembl chr 6:34,236,873...34,246,231
JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:2156014|PMID:10531422)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:10531422 PMID:21873635 GO_REF:0000104 MGI:2156014 NCBI chr 3:127,598,411...127,622,436
Ensembl chr 3:127,598,410...127,622,436
JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3582148|PMID:15917436)
GO_Central
MGI
PMID:15917436 PMID:21873635 MGI:3582148 NCBI chr 8:47,960,941...47,978,160
Ensembl chr 8:47,960,185...47,978,160
JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3582148|PMID:15917436)
GO_Central
MGI
PMID:15917436 PMID:21873635 MGI:3582148 NCBI chr 2:135,839,626...135,876,443
Ensembl chr 2:135,839,626...135,876,443
JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3582148|PMID:15917436)
GO_Central
MGI
PMID:15917436 PMID:21873635 MGI:3582148 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,728...100,101,940
JBrowse link
G PURA purine rich element binding protein A involved_in IDA (PMID:15777841) UniProt PMID:15777841 NCBI chr 5:140,114,109...140,125,619
Ensembl chr 5:140,107,777...140,125,619
JBrowse link
G RAD51 RAD51 recombinase involved_in IDA (PMID:7988572) UniProt PMID:7988572 NCBI chr15:40,694,774...40,732,340
Ensembl chr15:40,694,774...40,732,340
JBrowse link
G RECQL RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669
JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845
JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:75,626,845...75,667,202
Ensembl chr17:75,626,845...75,667,189
JBrowse link
G RPA1 replication protein A1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082
JBrowse link
G SSBP1 single stranded DNA binding protein 1 involved_in IDA (PMID:26446790) FlyBase PMID:26446790 NCBI chr 7:141,738,321...141,750,488
Ensembl chr 7:141,738,334...141,787,922
JBrowse link
G TWNK twinkle mtDNA helicase involved_in
acts_upstream_of_or_within
IDA
ISO
(PMID:15167897)
(MGI:2136707|PMID:11431692)
FlyBase
MGI
PMID:11431692 PMID:15167897 MGI:2136707 NCBI chr10:100,987,543...100,994,403
Ensembl chr10:100,987,367...100,994,403
JBrowse link
G WRN WRN RecQ like helicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
establishment of mitotic sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAA50 N-alpha-acetyltransferase 50, NatE catalytic subunit involved_in IDA (PMID:27422821) UniProt PMID:27422821 NCBI chr 3:113,716,458...113,746,249
Ensembl chr 3:113,716,458...113,746,300
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
establishment of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX11 DEAD/H-box helicase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799
JBrowse link
G DDX11L8 DEAD/H-box helicase 11 like 8 (pseudogene) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,310...14,526
Ensembl chr12:12,310...13,501
JBrowse link
G DDX12P DEAD/H-box helicase 12, pseudogene involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:9,417,691...9,448,172
Ensembl chr12:9,418,673...9,448,229
JBrowse link
female meiosis sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD51C RAD51 paralog C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703317|PMID:17312021) Ensembl
MGI
PMID:17312021 GO_REF:0000107 MGI:3703317 NCBI chr17:58,692,140...58,735,611
Ensembl chr17:58,692,573...58,735,611
JBrowse link
G SYCP3 synaptonemal complex protein 3 involved_in ISO (MGI:3578071|PMID:15870106) UniProt PMID:15870106 MGI:3578071 NCBI chr12:101,728,648...101,739,721
Ensembl chr12:101,728,648...101,739,472
JBrowse link
fertilization, exchange of chromosomal proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNP1 transition protein 1 involved_in TAS (PMID:12743712) UniProt PMID:12743712 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
G-quadruplex DNA unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase involved_in IBA
ISS
IDA
(PMID:21873635)
(PMID:11735402)
GO_Central
BHF-UCL
PMID:11735402 PMID:21873635 GO_REF:0000024 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166
JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in IDA (PMID:26503245) UniProt PMID:26503245 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IDA (PMID:16150737), (PMID:18842585) UniProt PMID:16150737 PMID:18842585 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA (PMID:21561811) UniProt PMID:21561811 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in TAS (PMID:27918544) BHF-UCL PMID:27918544 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,171,151...26,201,529
JBrowse link
G WRN WRN RecQ like helicase involved_in IDA
IBA
ISS
(PMID:11735402)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:11735402 PMID:21873635 GO_REF:0000024 NCBI chr 8:31,033,749...31,176,138
Ensembl chr 8:31,033,788...31,176,138
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAHD1 bromo adjacent homology domain containing 1 involved_in IMP (PMID:19666599) UniProt PMID:19666599 NCBI chr15:40,439,757...40,468,237
Ensembl chr15:40,439,721...40,468,236
JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107)
(MGI:4462332|PMID:20168299)
MGI PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr12:56,595,596...56,636,816
Ensembl chr12:56,595,596...56,636,816
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:22,321,099...22,331,484
Ensembl chr10:22,321,099...22,331,484
JBrowse link
G COMMD3-BMI1 COMMD3-BMI1 readthrough involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:22,316,388...22,331,484
Ensembl chr10:22,316,388...22,329,542
JBrowse link
G CTBP1 C-terminal binding protein 1 involved_in IMP (PMID:21102443) BHF-UCL PMID:21102443 NCBI chr 4:1,211,444...1,250,355
Ensembl chr 4:1,211,445...1,249,953
JBrowse link
G EED embryonic ectoderm development involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:86,244,753...86,285,420
Ensembl chr11:86,244,753...86,278,813
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISS (PMID:19026781) ARUK-UCL PMID:19026781 NCBI chr17:42,700,275...42,745,078
Ensembl chr17:42,700,275...42,745,049
JBrowse link
G H1-9P H1.9 linker histone, pseudogene involved_in IDA (PMID:12920187) UniProt PMID:12920187 NCBI chr17:50,171,428...50,172,476
Ensembl chr17:50,171,428...50,181,178
JBrowse link
G H2AB1 H2A.B variant histone 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,884,972...154,885,558
Ensembl chr  X:154,884,972...154,885,558
JBrowse link
G H2AB2 H2A.B variant histone 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:155,380,709...155,381,299
Ensembl chr  X:155,380,709...155,381,299
JBrowse link
G H2AB3 H2A.B variant histone 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:155,459,415...155,460,005
Ensembl chr  X:155,459,415...155,460,005
JBrowse link
G H2AC1 H2A clustered histone 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:25,726,063...25,726,562
Ensembl chr 6:25,726,063...25,726,562
JBrowse link
G H2AC11 H2A clustered histone 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,133,043...27,133,535
Ensembl chr 6:27,133,042...27,135,291
JBrowse link
G H2AC12 H2A clustered histone 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,147,106...27,147,562
Ensembl chr 6:27,147,106...27,147,562
JBrowse link
G H2AC13 H2A clustered histone 13 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,808,173...27,808,667
Ensembl chr 6:27,808,199...27,808,701
JBrowse link
G H2AC14 H2A clustered histone 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,814,302...27,814,777
Ensembl chr 6:27,814,302...27,814,777
JBrowse link
G H2AC15 H2A clustered histone 15 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,837,880...27,838,375
Ensembl chr 6:27,837,880...27,838,375
JBrowse link
G H2AC16 H2A clustered histone 16 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,865,317...27,865,798
Ensembl chr 6:27,865,317...27,865,798
JBrowse link
G H2AC17 H2A clustered histone 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,892,699...27,893,185
Ensembl chr 6:27,892,699...27,893,185
JBrowse link
G H2AC18 H2A clustered histone 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:149,842,218...149,842,750
Ensembl chr 1:149,842,188...149,842,736
JBrowse link
G H2AC19 H2A clustered histone 19 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:149,851,061...149,851,594
Ensembl chr 1:149,851,061...149,851,624
JBrowse link
G H2AC20 H2A clustered histone 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:149,886,918...149,887,411
Ensembl chr 1:149,886,918...149,887,411
JBrowse link
G H2AC21 H2A clustered histone 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:149,887,469...149,887,965
Ensembl chr 1:149,887,469...149,887,965
JBrowse link
G H2AC4 H2A clustered histone 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,033,092...26,033,618
Ensembl chr 6:26,033,092...26,033,618
JBrowse link
G H2AC6 H2A clustered histone 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,124,172...26,124,690
Ensembl chr 6:26,124,145...26,139,116
JBrowse link
G H2AC7 H2A clustered histone 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,198,784...26,199,293
Ensembl chr 6:26,198,784...26,199,293
JBrowse link
G H2AC8 H2A clustered histone 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:26,216,921...26,217,483
Ensembl chr 6:26,216,975...26,217,483
JBrowse link
G H2AJ H2A.J histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:14,774,405...14,778,002
Ensembl chr12:14,774,383...14,778,002
JBrowse link
G H2AL3 H2A.L variant histone 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:37,994,252...37,994,918
Ensembl chr  X:37,994,252...37,994,918
JBrowse link
G H2AP H2A.P histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:37,990,779...37,991,314
Ensembl chr  X:37,990,779...37,991,314
JBrowse link
G H2AW H2A.W histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:228,457,364...228,457,873
Ensembl chr 1:228,456,979...228,457,873
JBrowse link
G H2AX H2A.X variant histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,854...119,095,467
JBrowse link
G H2AZ1 H2A.Z variant histone 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,948,088...99,950,275
Ensembl chr 4:99,948,086...99,950,355
JBrowse link
G H2AZ2 H2A.Z variant histone 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:44,826,889...44,848,126
Ensembl chr 7:44,826,791...44,848,087
JBrowse link
G HDAC5 histone deacetylase 5 involved_in TAS (PMID:10869435) PINC PMID:10869435 NCBI chr17:44,076,753...44,123,651
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G HELLS helicase, lymphoid specific acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3510059|PMID:15448183) MGI
Ensembl
PMID:15448183 GO_REF:0000107 MGI:3510059 NCBI chr10:94,545,778...94,613,905
Ensembl chr10:94,501,434...94,613,905
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:16901784) UniProt PMID:16901784 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HOTAIR HOX transcript antisense RNA acts_upstream_of_or_within ISO (MGI:5528742|PMID:24075995) MGI PMID:24075995 MGI:5528742 NCBI chr12:53,962,308...53,974,956
Ensembl chr12:53,962,308...53,974,956
JBrowse link
G KDM1A lysine demethylase 1A involved_in ISO (MGI:4461095|PMID:20123967) BHF-UCL PMID:20123967 MGI:4461095 NCBI chr 1:23,019,443...23,083,691
Ensembl chr 1:23,019,443...23,083,689
JBrowse link
G KMT2D lysine methyltransferase 2D involved_in ISS UniProt GO_REF:0000024 NCBI chr12:49,018,975...49,060,884
Ensembl chr12:49,018,978...49,060,794
JBrowse link
G MACROH2A1 macroH2A.1 histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:135,334,381...135,401,998
Ensembl chr 5:135,333,900...135,399,914
JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:70,052,846...70,112,282
Ensembl chr10:70,052,544...70,112,282
JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530434|PMID:15608638) MGI
Ensembl
PMID:15608638 GO_REF:0000107 MGI:3530434 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139
JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158
JBrowse link
G MSL3 MSL complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:11,758,159...11,775,772
Ensembl chr  X:11,758,159...11,775,772
JBrowse link
G MSL3P1 MSL complex subunit 3 pseudogene 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:233,865,437...233,868,409
Ensembl chr 2:233,865,437...233,868,444
JBrowse link
G PCGF1 polycomb group ring finger 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:74,505,043...74,507,695
Ensembl chr 2:74,505,043...74,507,695
JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:38,733,898...38,749,817
Ensembl chr17:38,733,898...38,749,817
JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:113,407,235...113,410,749
Ensembl chr 9:113,407,235...113,410,675
JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D involved_in ISS UniProt GO_REF:0000024 NCBI chr17:60,600,187...60,666,280
Ensembl chr17:60,600,183...60,666,280
JBrowse link
G SIRT1 sirtuin 1 involved_in IDA (PMID:15469825) BHF-UCL PMID:15469825 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SIRT2 sirtuin 2 involved_in NAS (PMID:12697818) UniProt PMID:12697818 NCBI chr19:38,878,555...38,899,733
Ensembl chr19:38,878,555...38,899,862
JBrowse link
G TNP1 transition protein 1 involved_in IEP (PMID:11315969) UniProt PMID:11315969 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064
JBrowse link
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 6:42,563,954...42,693,505
Ensembl chr 6:42,564,029...42,693,505
JBrowse link
G UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) MGI PMID:22192413 MGI:5305502 NCBI chr  Y:13,231,827...13,480,670
Ensembl chr  Y:13,234,577...13,480,673
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM172A family with sequence similarity 172 member A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:93,615,130...94,111,699
Ensembl chr 5:93,617,725...94,111,699
JBrowse link
G FAM172BP family with sequence similarity 172 member B, pseudogene involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:101,518,867...101,523,887
Ensembl chr 3:101,521,891...101,522,979
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:90,267,860...90,331,969
Ensembl chr14:90,267,860...90,331,969
JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:49,245,900...49,278,057
Ensembl chr20:49,237,946...49,278,426
JBrowse link
heterochromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HP1BP3 heterochromatin protein 1 binding protein 3 involved_in IEA
IMP
IBA
(PMID:24830416)
(PMID:21873635)
InterPro
UniProt
GO_Central
PMID:21873635 PMID:24830416 GO_REF:0000002 NCBI chr 1:20,740,266...20,787,307
Ensembl chr 1:20,740,266...20,787,323
JBrowse link
G LOXL2 lysyl oxidase like 2 involved_in IMP (PMID:24239292) UniProt PMID:24239292 NCBI chr 8:23,296,897...23,404,120
Ensembl chr 8:23,296,897...23,425,328
JBrowse link
G MECOM MDS1 and EVI1 complex locus involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:169,083,506...169,663,781
Ensembl chr 3:169,083,499...169,663,775
JBrowse link
G PRDM16 PR/SET domain 16 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:3,069,203...3,438,621
Ensembl chr 1:3,069,168...3,438,621
JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within IDA (PMID:23509280) MGI PMID:23509280 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:49,444,274...49,495,003
Ensembl chr13:49,444,374...49,495,003
JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:49,982,980...49,988,886
Ensembl chr20:49,982,980...49,988,886
JBrowse link
histone displacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRDT bromodomain testis associated involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:91,949,371...92,014,428
Ensembl chr 1:91,949,343...92,014,426
JBrowse link
histone exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC106886.5 novel transcript involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr16:30,704,067...30,745,169 JBrowse link
G ACTR6 actin related protein 6 involved_in IBA (PMID:21873635) GO_Central PM