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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of RNA localization
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Accession:GO:0051236 term browser browse the term
Definition:The directed movement of RNA to a specific location.
Synonyms:exact_synonym: RNA positioning;   RNA recruitment;   establishment of RNA localisation


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dsRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004955583:717,246...729,924
Ensembl chrNW_004955583:713,560...729,924
JBrowse link
G Rftn1 raftlin, lipid raft linker 1 acts_upstream_of_or_within ISO (PMID:21266579) MGI PMID:21266579 NCBI chrNW_004955430:8,605,057...8,801,187
Ensembl chrNW_004955430:8,603,401...8,779,896
JBrowse link
G Rftn2 raftlin family member 2 acts_upstream_of_or_within ISO (MGI:4947923|PMID:21266579) MGI PMID:21266579 MGI:4947923 NCBI chrNW_004955403:2,982,753...3,030,594
Ensembl chrNW_004955403:2,983,270...3,030,643
JBrowse link
establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chrNW_004955508:3,337,036...3,440,313
Ensembl chrNW_004955508:3,337,432...3,440,257
JBrowse link
miRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:24356509) UniProt PMID:24356509 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in ISO (MGI:6099018|PMID:25801897) BHF-UCL PMID:25801897 MGI:6099018 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:27559612) UniProt PMID:27559612 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link
mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISO (PMID:23177736) UniProt PMID:23177736 NCBI chrNW_004955478:11,104,445...11,128,980
Ensembl chrNW_004955478:11,105,920...11,128,222
JBrowse link
G Alyref Aly/REF export factor involved_in ISO (PMID:17190602), (PMID:25662211) UniProt PMID:17190602 PMID:25662211 NCBI chrNW_004955506:1,278,230...1,282,064
Ensembl chrNW_004955506:1,278,471...1,281,772
JBrowse link
G Chtop chromatin target of PRMT1 involved_in ISO (PMID:23299939) UniProt PMID:23299939 NCBI chrNW_004955545:282,342...292,428
Ensembl chrNW_004955545:282,342...292,785
JBrowse link
G Ddx25 DEAD-box helicase 25 involved_in ISO (MGI:3696333|PMID:16968703) UniProt PMID:16968703 MGI:3696333 NCBI chrNW_004955412:26,952,655...26,973,758
Ensembl chrNW_004955412:26,952,239...26,972,100
JBrowse link
G Ddx39a DExD-box helicase 39A involved_in ISO (PMID:15047853) UniProt PMID:15047853 NCBI chrNW_004955415:33,021,976...33,030,479
Ensembl chrNW_004955415:33,019,997...33,030,177
JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO (PMID:17190602)
(PMID:15047853)
UniProt PMID:15047853 PMID:17190602 NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
JBrowse link
G Fyttd1 forty-two-three domain containing 1 involved_in ISO (PMID:19836239) UniProt PMID:19836239 NCBI chrNW_004955420:12,095,055...12,123,900 JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (PMID:12554669) BHF-UCL PMID:12554669 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:10567417)
PMID:9578590
UniProt PMID:9578590 PMID:10567417 RGD:9685424 RGD:9685477 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:17190602), (PMID:26382858)
(PMID:21326824)
UniProt
ComplexPortal
PMID:17190602 PMID:21326824 PMID:26382858 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:21326824) ComplexPortal PMID:21326824 NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500
JBrowse link
G Ncbp3 nuclear cap binding subunit 3 involved_in ISO (PMID:26382858) ComplexPortal PMID:26382858 NCBI chrNW_004955467:13,011,755...13,043,161
Ensembl chrNW_004955467:13,011,566...13,042,734
JBrowse link
G Nup107 nucleoporin 107 involved_in ISO (PMID:11684705) UniProt PMID:11684705 NCBI chrNW_004955458:15,148,773...15,201,717
Ensembl chrNW_004955458:15,149,054...15,201,635
JBrowse link
G Nup133 nucleoporin 133 involved_in ISO (PMID:11684705) UniProt PMID:11684705 NCBI chrNW_004955492:8,583,902...8,641,891
Ensembl chrNW_004955492:8,583,869...8,643,433
JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO (MGI:3839697|PMID:19070573) MGI PMID:19070573 MGI:3839697 NCBI chrNW_004955426:21,997,208...22,057,205
Ensembl chrNW_004955426:21,997,208...22,057,205
JBrowse link
G Nup160 nucleoporin 160 involved_in ISO (PMID:11684705)
(MGI:3690169|PMID:11684705)
UniProt PMID:11684705 MGI:3690169 NCBI chrNW_004955422:561,339...598,598
Ensembl chrNW_004955422:561,339...599,575
JBrowse link
G Nup214 nucleoporin 214 involved_in
acts_upstream_of_or_within
ISO (PMID:10557333)
(MGI:83941|PMID:8896451)
UniProt
MGI
PMID:8896451 PMID:10557333 MGI:83941 NCBI chrNW_004955513:955,639...1,038,912 JBrowse link
G Nxf1 nuclear RNA export factor 1 involved_in ISO (PMID:19165146), (PMID:25628361), (PMID:28984244) UniProt PMID:19165146 PMID:25628361 PMID:28984244 NCBI chrNW_004955599:439,773...450,834
Ensembl chrNW_004955599:439,775...454,300
JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 involved_in ISO (PMID:25628361) ComplexPortal PMID:25628361 NCBI chrNW_004955415:30,366,993...30,369,688
Ensembl chrNW_004955415:30,366,993...30,369,688
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO (MGI:6158828|PMID:19586903) UniProt PMID:19586903 MGI:6158828 NCBI chrNW_004955532:3,080,207...3,082,312 JBrowse link
G Sarnp SAP domain containing ribonucleoprotein involved_in ISO (PMID:20844015) UniProt PMID:20844015 NCBI chrNW_004955458:3,396,443...3,451,193
Ensembl chrNW_004955458:3,402,822...3,451,193
JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:28984244) UniProt PMID:28984244 NCBI chrNW_004955437:6,306,151...6,314,332
Ensembl chrNW_004955437:6,306,151...6,314,332
JBrowse link
G Thoc1 THO complex 1 involved_in ISO (PMID:22144908)
(PMID:17190602)
UniProt PMID:17190602 PMID:22144908 NCBI chrNW_004955402:9,675,211...9,708,045
Ensembl chrNW_004955402:9,675,204...9,708,045
JBrowse link
G Thoc2 THO complex 2 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004955473:11,029,860...11,143,493
Ensembl chrNW_004955473:11,029,714...11,144,880
JBrowse link
G Thoc3 THO complex 3 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004955408:28,467,540...28,480,613
Ensembl chrNW_004955408:28,467,540...28,480,613
JBrowse link
G Thoc5 THO complex 5 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004955455:3,761,933...3,795,517
Ensembl chrNW_004955455:3,761,874...3,795,517
JBrowse link
G Thoc6 THO complex 6 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004955442:14,314,100...14,317,726
Ensembl chrNW_004955442:14,314,100...14,317,724
JBrowse link
G Thoc7 THO complex 7 involved_in ISO (PMID:17190602) UniProt PMID:17190602 NCBI chrNW_004955517:2,037,406...2,046,694
Ensembl chrNW_004955517:2,027,281...2,046,694
JBrowse link
G Ythdc1 YTH domain containing 1 involved_in ISO (PMID:28984244) UniProt PMID:28984244 NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913
JBrowse link
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:17897941) UniProt PMID:17897941 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
mRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity regulated cytoskeleton associated protein involved_in ISO PMID:29328916 UniProt PMID:29328916 RGD:13514080 NCBI chrNW_004955454:1,379,998...1,383,414
Ensembl chrNW_004955454:1,379,998...1,383,414
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:12629046 RGD:9685156 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:3798322|PMID:18539120) UniProt PMID:18539120 MGI:3798322 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:11886857 RGD:625404 NCBI chrNW_004955403:19,540,814...19,548,417
Ensembl chrNW_004955403:19,544,842...19,548,417
JBrowse link
G Htt huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Kif5c kinesin family member 5C involved_in ISO (MGI:4413400|PMID:19608740) UniProt PMID:19608740 MGI:4413400 NCBI chrNW_004955440:14,754,931...14,854,090
Ensembl chrNW_004955440:14,754,639...14,854,406
JBrowse link
G Mapt microtubule associated protein tau ISO RGD PMID:25847153 RGD:11061097 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442
JBrowse link
G Peg10 paternally expressed 10 involved_in ISO (MGI:6828898|PMID:34413232) UniProt PMID:34413232 MGI:6828898 NCBI chrNW_004955432:11,383,919...11,395,313
Ensembl chrNW_004955432:11,390,847...11,391,929
JBrowse link
G Slbp stem-loop binding protein involved_in ISO (PMID:19155325) UniProt PMID:19155325 NCBI chrNW_004955514:954,489...968,670
Ensembl chrNW_004955514:955,296...967,327
JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:17369404) UniProt PMID:17369404 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:17369404) UniProt PMID:17369404 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
negative regulation of establishment of RNA localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:26586433) BHF-UCL PMID:26586433 NCBI chrNW_004955444:7,103,282...7,149,450
Ensembl chrNW_004955444:7,103,552...7,150,323
JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup153 nucleoporin 153 involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chrNW_004955483:8,377,253...8,457,018
Ensembl chrNW_004955483:8,388,066...8,455,965
JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:22253824)
(PMID:21613532)
UniProt PMID:21613532 PMID:22253824 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eny2 ENY2 transcription and export complex 2 subunit involved_in ISO (PMID:23591820) UniProt PMID:23591820 NCBI chrNW_004955417:16,750,563...16,760,839
Ensembl chrNW_004955417:16,750,579...16,760,839
JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (PMID:12554669) BHF-UCL PMID:12554669 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775
JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein involved_in ISO (PMID:23591820) UniProt PMID:23591820 NCBI chrNW_004955407:42,657,422...42,706,339
Ensembl chrNW_004955407:42,657,588...42,705,315
JBrowse link
G Nxf1 nuclear RNA export factor 1 acts_upstream_of_or_within ISO (MGI:3575625|PMID:15820316) MGI PMID:15820316 MGI:3575625 NCBI chrNW_004955599:439,773...450,834
Ensembl chrNW_004955599:439,775...454,300
JBrowse link
G Pabpn1 poly(A) binding protein nuclear 1 involved_in ISO (PMID:19364924) UniProt PMID:19364924 NCBI chrNW_004955409:37,000,423...37,004,823
Ensembl chrNW_004955409:37,000,451...37,004,682
JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 involved_in ISO (PMID:22928037)
(MGI:5520029|PMID:22928037)
UniProt PMID:22928037 MGI:5520029 NCBI chrNW_004955413:27,944,109...27,968,156
Ensembl chrNW_004955413:27,943,520...27,968,156
JBrowse link
G Thoc2 THO complex 2 involved_in ISO (PMID:22928037) UniProt PMID:22928037 NCBI chrNW_004955473:11,029,860...11,143,493
Ensembl chrNW_004955473:11,029,714...11,144,880
JBrowse link
G Zc3h11a zinc finger CCCH-type containing 11A involved_in ISO (PMID:22928037) UniProt PMID:22928037 NCBI chrNW_004955406:39,678,544...39,718,062 JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO (PMID:19864460) UniProt PMID:19864460 NCBI chrNW_004955458:15,684,040...15,708,011
Ensembl chrNW_004955458:15,677,645...15,708,011
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11402034) UniProt PMID:11402034 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:21613532) UniProt PMID:21613532 NCBI chrNW_004955452:10,413,883...10,458,518
Ensembl chrNW_004955452:10,413,883...10,440,678
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) UniProt PMID:30842217 NCBI chrNW_004955438:12,726,206...12,780,364
Ensembl chrNW_004955438:12,726,357...12,780,379
JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpo5 exportin 5 involved_in ISO (PMID:14681208)
(PMID:15613540)
BHF-UCL PMID:14681208 PMID:15613540 NCBI chrNW_004955437:9,351,045...9,392,396
Ensembl chrNW_004955437:9,351,045...9,392,396
JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:11402034) UniProt PMID:11402034 NCBI chrNW_004955495:7,839,339...7,874,432
Ensembl chrNW_004955495:7,839,339...7,874,432
JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISO (PMID:17234882) UniProt PMID:17234882 NCBI chrNW_004955459:3,021,320...3,063,363
Ensembl chrNW_004955459:3,021,764...3,063,128
JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chrNW_004955504:4,339,044...4,360,176
Ensembl chrNW_004955504:4,338,855...4,361,520
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:19141475) UniProt PMID:19141475 NCBI chrNW_004955420:25,070,626...25,178,410
Ensembl chrNW_004955420:25,090,798...25,177,760
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (MGI:5508611|PMID:17234882) UniProt PMID:17234882 MGI:5508611 NCBI chrNW_004955481:4,462,270...4,497,364
Ensembl chrNW_004955481:4,462,270...4,497,364
JBrowse link
G Thoc2 THO complex 2 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) MGI PMID:24315442 MGI:5529717 NCBI chrNW_004955473:11,029,860...11,143,493
Ensembl chrNW_004955473:11,029,714...11,144,880
JBrowse link
G Thoc5 THO complex 5 acts_upstream_of_or_within ISO (MGI:5529717|PMID:24315442) MGI PMID:24315442 MGI:5529717 NCBI chrNW_004955455:3,761,933...3,795,517
Ensembl chrNW_004955455:3,761,874...3,795,517
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) UniProt PMID:22253824 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 acts_upstream_of_or_within ISO (MGI:2446384|PMID:12496368) MGI PMID:12496368 MGI:2446384 NCBI chrNW_004955452:10,413,883...10,458,518
Ensembl chrNW_004955452:10,413,883...10,440,678
JBrowse link
RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor involved_in ISO (PMID:28418038) UniProt PMID:28418038 NCBI chrNW_004955506:1,278,230...1,282,064
Ensembl chrNW_004955506:1,278,471...1,281,772
JBrowse link
G Nxf1 nuclear RNA export factor 1 acts_upstream_of_or_within ISO (MGI:2154056|PMID:11579093) MGI PMID:11579093 MGI:2154056 NCBI chrNW_004955599:439,773...450,834
Ensembl chrNW_004955599:439,775...454,300
JBrowse link
G Nxt1 nuclear transport factor 2 like export factor 1 acts_upstream_of_or_within ISO (MGI:2154056|PMID:11579093) MGI PMID:11579093 MGI:2154056 NCBI chrNW_004955415:30,366,993...30,369,688
Ensembl chrNW_004955415:30,366,993...30,369,688
JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:11952838) UniProt PMID:11952838 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
RNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904) UniProt PMID:20691904 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992
JBrowse link
RNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpnb1 karyopherin subunit beta 1 involved_in ISO (PMID:9670026) ComplexPortal PMID:9670026 NCBI chrNW_004955451:13,365,881...13,398,491
Ensembl chrNW_004955451:13,365,476...13,398,491
JBrowse link
G Snupn snurportin 1 involved_in ISO (PMID:9670026) ComplexPortal PMID:9670026 NCBI chrNW_004955450:2,701,496...2,720,971
Ensembl chrNW_004955450:2,691,617...2,722,150
JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO (PMID:9864356) UniProt PMID:9864356 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
RNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO (PMID:17004321) RGD
HGNC-UCL
PMID:14523087 PMID:17004321 RGD:9685480 NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
JBrowse link
G Sidt2 SID1 transmembrane family member 2 involved_in ISO (PMID:28277980)
(MGI:5908512|PMID:27046251), (MGI:5909194|PMID:28277980)
UniProt PMID:27046251 PMID:28277980 MGI:5908512 MGI:5909194 NCBI chrNW_004955412:18,505,453...18,521,667
Ensembl chrNW_004955412:18,505,453...18,522,082
JBrowse link
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link
rRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (MGI:3822232|PMID:18809582) MGI PMID:18809582 MGI:3822232 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:17308101) UniProt PMID:17308101 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992
JBrowse link
rRNA import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrpl18 mitochondrial ribosomal protein L18 involved_in ISO (PMID:21685364) UniProt PMID:21685364 NCBI chrNW_004955439:21,059,736...21,067,100
Ensembl chrNW_004955439:21,058,187...21,067,100
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904) UniProt PMID:20691904 NCBI chrNW_004955424:27,407,451...27,449,830
Ensembl chrNW_004955424:27,407,489...27,448,992
JBrowse link
G Tst thiosulfate sulfurtransferase involved_in ISO (PMID:20663881) UniProt PMID:20663881 NCBI chrNW_004955413:23,528,468...23,534,890
Ensembl chrNW_004955413:23,528,417...23,534,979
JBrowse link
rRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tst thiosulfate sulfurtransferase involved_in ISO (PMID:21685364) UniProt PMID:21685364 NCBI chrNW_004955413:23,528,468...23,534,890
Ensembl chrNW_004955413:23,528,417...23,534,979
JBrowse link
snRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:26382858) ComplexPortal PMID:26382858 NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
JBrowse link
G Ncbp3 nuclear cap binding subunit 3 involved_in ISO (PMID:26382858) ComplexPortal PMID:26382858 NCBI chrNW_004955467:13,011,755...13,043,161
Ensembl chrNW_004955467:13,011,566...13,042,734
JBrowse link
G Phax phosphorylated adaptor for RNA export acts_upstream_of_or_within ISO (MGI:1891494|PMID:10786834) MGI PMID:10786834 MGI:1891494 NCBI chrNW_004955521:4,425,382...4,442,668
Ensembl chrNW_004955521:4,425,426...4,443,082
JBrowse link
snRNA import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:8636225) UniProt PMID:8636225 NCBI chrNW_004955482:1,222,944...1,223,891
Ensembl chrNW_004955482:1,220,876...1,224,395
JBrowse link
tRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:17308035) CAFA PMID:17308035 NCBI chrNW_004955449:4,806,468...4,815,175 JBrowse link
G Xpot exportin for tRNA involved_in ISO (PMID:9660920) UniProt PMID:9660920 NCBI chrNW_004955458:11,162,612...11,206,515
Ensembl chrNW_004955458:11,162,782...11,208,849
JBrowse link
tRNA transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ybx1 Y-box binding protein 1 involved_in ISO (PMID:29073095) UniProt PMID:29073095 NCBI chrNW_004955537:2,234,052...2,254,528
Ensembl chrNW_004955537:2,234,054...2,251,708
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12243
    localization 4170
      establishment of localization 3551
        establishment of RNA localization 77
          RNA transport + 74
          establishment of RNA localization to telomere + 3
          establishment of pole plasm mRNA localization 0
Path 2
Term Annotations click to browse term
  biological_process 12243
    localization 4170
      macromolecule localization 2299
        RNA localization 112
          establishment of RNA localization 77
            RNA transport + 74
            establishment of RNA localization to telomere + 3
            establishment of pole plasm mRNA localization 0
paths to the root