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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of smooth muscle cell differentiation
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Accession:GO:0051150 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.



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regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347470 (MGI:3766861|PMID:17881493)
Ensembl
RGD
PMID:17881493 GO_REF:0000107 MGI:3766861 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 NAS RGD PMID:9642040 RGD:1299488 NCBI chr 1:20,563,700...20,635,044
Ensembl chr 1:20,563,697...20,635,041
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Myocd myocardin IMP RGD PMID:12756293 RGD:1299358 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3641341|PMID:16824956)
Ensembl
RGD
PMID:16824956 GO_REF:0000107 MGI:3641341 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
JBrowse link
negative regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf5 Kruppel-like factor 5 involved_in IDA PMID:19542014 BHF-UCL PMID:19542014 RGD:13210556 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:2388350|PMID:12399320)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
negative regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 acts_upstream_of_or_within ISO MGI:4360512 (MGI:4360129|PMID:19619540) RGD PMID:19619540 MGI:4360129 NCBI chr14:17,723,239...17,862,625
Ensembl chr14:17,721,932...17,862,617
JBrowse link
G Ereg epiregulin involved_in ISO
ISS
(PMID:14581411)
GO_REF:0000024
RGD
UniProt
PMID:14581411 GO_REF:0000024 NCBI chr14:17,027,287...17,041,062
Ensembl chr14:17,027,287...17,041,062
JBrowse link
G Foxo4 forkhead box O4 involved_in ISO (PMID:16054032) RGD PMID:16054032 NCBI chr  X:66,385,241...66,392,115
Ensembl chr  X:66,385,558...66,392,115
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5811980|PMID:25722434)
Ensembl
RGD
PMID:25722434 GO_REF:0000107 MGI:5811980 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Med28 mediator complex subunit 28 acts_upstream_of_or_within ISO (MGI:3762062|PMID:17848560) RGD PMID:17848560 MGI:3762062 NCBI chr14:65,594,785...65,603,583
Ensembl chr14:65,594,647...65,603,583
JBrowse link
G Prdm6 PR/SET domain 6 acts_upstream_of_or_within ISO (MGI:3619789|PMID:16537907) RGD PMID:16537907 MGI:3619789 NCBI chr18:46,904,115...47,008,482
Ensembl chr18:46,904,127...47,007,823
JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 involved_in ISO
IBA
(PMID:25064856)
PMID:21873635
RGD PMID:25064856 PMID:21873635 RGD:13792537 NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268
JBrowse link
G Rcan1 regulator of calcineurin 1 IDA RGD PMID:15148306 RGD:1581653 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 involved_in ISO (PMID:23853098) RGD PMID:23853098 NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 involved_in ISO (PMID:23853098) RGD PMID:23853098 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 involved_in ISO (PMID:23853098) RGD PMID:23853098 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:18548003) RGD PMID:18548003 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA
ISO
GO_REF:0000107
(PMID:19088079)
Ensembl
RGD
PMID:19088079 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(PMID:27021683)
GO_REF:0000107
RGD
Ensembl
PMID:27021683 GO_REF:0000107 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in IMP PMID:28259995 BHF-UCL PMID:28259995 RGD:13601993 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
JBrowse link
positive regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cth cystathionine gamma-lyase involved_in ISO
IEA
(PMID:21659522)
GO_REF:0000107
RGD
Ensembl
PMID:21659522 GO_REF:0000107 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:4947512|PMID:20019329) RGD PMID:20019329 MGI:4947512 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO
IEA
(PMID:23840305)
GO_REF:0000107
RGD
Ensembl
PMID:23840305 GO_REF:0000107 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Myocd myocardin involved_in IDA PMID:16151017 BHF-UCL PMID:16151017 RGD:8554320 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
positive regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myocd myocardin involved_in ISO
IEA
(PMID:18451334)
GO_REF:0000107
RGD
Ensembl
PMID:18451334 GO_REF:0000107 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Olfm2 olfactomedin 2 involved_in ISO
ISS
(PMID:25298399)
GO_REF:0000024
RGD
UniProt
PMID:25298399 GO_REF:0000024 NCBI chr 8:19,204,472...19,282,154
Ensembl chr 8:19,204,475...19,282,117
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 IMP RGD PMID:16135793 RGD:2303115 NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5810254|PMID:25526086) RGD PMID:25526086 MGI:5810254 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 IDA RGD PMID:23110084 RGD:9586362 NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IDA PMID:8616889 MGI PMID:8616889 RGD:8553354 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in ISO (MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:3721185 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:19088079) RGD PMID:19088079 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sod2 superoxide dismutase 2 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdc4 syndecan 4 NOT|involved_in IDA PMID:25089138 BHF-UCL PMID:25089138 RGD:11079193 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    regulation of biological process 13033
      regulation of cellular process 12501
        regulation of cell differentiation 1730
          regulation of muscle cell differentiation 155
            regulation of smooth muscle cell differentiation 35
              negative regulation of smooth muscle cell differentiation + 17
              positive regulation of smooth muscle cell differentiation + 14
              regulation of kidney smooth muscle cell differentiation + 1
              regulation of ureter smooth muscle cell differentiation + 1
              regulation of vascular associated smooth muscle cell differentiation + 16
Path 2
Term Annotations click to browse term
  biological_process 19834
    cellular process 18637
      cellular developmental process 4607
        cell differentiation 4511
          muscle cell differentiation 440
            smooth muscle cell differentiation 80
              regulation of smooth muscle cell differentiation 35
                negative regulation of smooth muscle cell differentiation + 17
                positive regulation of smooth muscle cell differentiation + 14
                regulation of kidney smooth muscle cell differentiation + 1
                regulation of ureter smooth muscle cell differentiation + 1
                regulation of vascular associated smooth muscle cell differentiation + 16
paths to the root