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ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle cell differentiation
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Accession:GO:0051145 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary.
Synonyms:exact_synonym: nonstriated muscle cell differentiation



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smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 acts_upstream_of_or_within IMP (MGI:3703113|PMID:17078885) MGI PMID:17078885 MGI:3703113 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
JBrowse link
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) acts_upstream_of_or_within IDA
IMP
(MGI:1313232|PMID:9788961) MGI PMID:9788961 MGI:1313232 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (MGI:3624584|PMID:16546160) MGI PMID:16546160 MGI:3624584 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IMP (MGI:4359548|PMID:19690384) MGI PMID:19690384 MGI:4359548 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (MGI:3716020|PMID:17560563) MGI PMID:17560563 MGI:3716020 NCBI chr13:118,851,235...118,929,109
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP
IGI
(MGI:2135612|PMID:11493558), (MGI:3766861|PMID:17881493)
(MGI:3766861|PMID:17881493)
MGI PMID:11493558 PMID:17881493 MGI:2135612 MGI:3766861 NCBI chr 8:121,811,125...121,814,893
Ensembl chr 8:121,811,125...121,814,883
JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
JBrowse link
G Itga8 integrin alpha 8 involved_in IDA (MGI:4947862|PMID:21335239) BHF-UCL PMID:21335239 MGI:4947862 NCBI chr 2:12,111,443...12,306,796
Ensembl chr 2:12,111,443...12,306,733
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (MGI:1298294|PMID:9778514) MGI PMID:9778514 MGI:1298294 NCBI chr13:83,652,136...83,815,198
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mrtfa myocardin related transcription factor A involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:80,896,482...81,074,937
Ensembl chr15:80,896,482...81,074,958
JBrowse link
G Mrtfb myocardin related transcription factor B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
ISO
IMP
IBA
(MGI:2670236|PMID:12867591), (MGI:4941650|PMID:21357509)
(MGI:6201960|PMID:21873635)
(MGI:3773460|PMID:18188448)
MGI
RGD
GO_Central
PMID:12392995 PMID:12867591 PMID:18188448 PMID:21357509 PMID:21873635 GO_REF:0000096 MGI:2670236 MGI:3773460 MGI:4417868 MGI:4834177 MGI:4941650 MGI:6201960 RGD:1299359 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Npnt nephronectin involved_in IDA (MGI:4947862|PMID:21335239) BHF-UCL PMID:21335239 MGI:4947862 NCBI chr 3:132,587,506...132,656,052
Ensembl chr 3:132,587,506...132,656,052
JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within IMP (MGI:3505802|PMID:15497153) MGI PMID:15497153 MGI:3505802 NCBI chr 6:126,078,375...126,143,734
Ensembl chr 6:126,078,375...126,143,873
JBrowse link
G Tbx18 T-box18 acts_upstream_of_or_within IMP (MGI:3618666|PMID:16511601) MGI PMID:16511601 MGI:3618666 NCBI chr 9:87,584,853...87,613,313
Ensembl chr 9:87,584,853...87,613,313
JBrowse link
G Tbx2 T-box 2 acts_upstream_of_or_within IGI (MGI:6284231|PMID:30478225) MGI PMID:30478225 MGI:6284231 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774
JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IGI (MGI:6284231|PMID:30478225) MGI PMID:30478225 MGI:6284231 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789
JBrowse link
G Tmem204 transmembrane protein 204 involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:4443218|PMID:20439428)
GO_Central
MGI
PMID:20439428 PMID:21873635 MGI:4443218 MGI:6201960 NCBI chr17:25,276,676...25,300,088
Ensembl chr17:25,276,676...25,302,565
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP
IDA
(MGI:3624584|PMID:16546160) MGI PMID:16546160 MGI:3624584 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037
JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (MGI:4359548|PMID:19690384) MGI PMID:19690384 MGI:4359548 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674
JBrowse link
aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 acts_upstream_of_or_within IMP (MGI:5007924|PMID:19342595) MGI PMID:19342595 MGI:5007924 NCBI chr19:26,580,804...26,755,721
Ensembl chr19:26,582,450...26,755,722
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (MGI:5007924|PMID:19342595) MGI PMID:19342595 MGI:5007924 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526
JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 acts_upstream_of_or_within IMP (MGI:4838384|PMID:20619341) MGI PMID:20619341 MGI:4838384 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797
JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Pbrm1 polybromo 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549
JBrowse link
G Smad6 SMAD family member 6 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:63,860,358...63,929,374
Ensembl chr 9:63,860,358...63,929,341
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IMP (MGI:4461879|PMID:18093989) BHF-UCL PMID:18093989 MGI:4461879 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
JBrowse link
G Mesp1 mesoderm posterior 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within IGI (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr18:61,782,267...61,782,329
Ensembl chr18:61,782,267...61,782,329
JBrowse link
G Mir145a microRNA 145a acts_upstream_of_or_within IGI (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965
JBrowse link
G Myocd myocardin involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (MGI:3513738|PMID:15569937) MGI PMID:15569937 MGI:3513738 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
G Vangl2 VANGL planar cell polarity 2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
enteric smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B involved_in IDA (MGI:1330409|PMID:10021336) BHF-UCL PMID:10021336 MGI:1330409 NCBI chr14:104,052,051...104,083,248
Ensembl chr14:104,052,061...104,081,838
JBrowse link
epicardium-derived cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Prok2 prokineticin 2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 6:99,688,260...99,703,353
Ensembl chr 6:99,688,260...99,703,353
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tshz3 teashirt zinc finger family member 3 involved_in IMP (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr 7:36,397,543...36,472,978
Ensembl chr 7:36,397,543...36,472,978
JBrowse link
negative regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21a microRNA 21a involved_in ISO (PMID:22034194) BHF-UCL PMID:22034194 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog involved_in IDA (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
negative regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 acts_upstream_of_or_within IMP (MGI:4360129|PMID:19619540) MGI PMID:19619540 MGI:4360129 NCBI chr 5:90,375,025...90,517,133
Ensembl chr 5:90,375,025...90,514,436
JBrowse link
G Ereg epiregulin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:91,222,476...91,241,508
Ensembl chr 5:91,222,481...91,241,505
JBrowse link
G Foxo4 forkhead box O4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:100,297,855...100,304,479
Ensembl chr  X:100,298,134...100,304,479
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IMP (MGI:5811980|PMID:25722434) BHF-UCL PMID:25722434 MGI:5811980 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,178,969
JBrowse link
G Med28 mediator complex subunit 28 acts_upstream_of_or_within IMP (MGI:3762062|PMID:17848560) MGI PMID:17848560 MGI:3762062 NCBI chr 5:45,677,571...45,686,626
Ensembl chr 5:45,677,571...45,686,618
JBrowse link
G Prdm6 PR domain containing 6 acts_upstream_of_or_within IMP (MGI:3619789|PMID:16537907) MGI PMID:16537907 MGI:3619789 NCBI chr18:53,597,027...53,708,976
Ensembl chr18:53,596,655...53,708,979
JBrowse link
G Rbpms2 RNA binding protein with multiple splicing 2 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 9:65,536,638...65,567,818
Ensembl chr 9:65,536,930...65,567,810
JBrowse link
G Rcan1 regulator of calcineurin 1 involved_in ISO RGD
MGI
PMID:15148306 GO_REF:0000096 MGI:4417868 RGD:1581653 NCBI chr16:92,188,839...92,263,057
Ensembl chr16:92,188,841...92,267,755
JBrowse link
negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316
JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IDA (MGI:5284767|PMID:18239137) BHF-UCL PMID:18239137 MGI:5284767 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IDA (MGI:5811980|PMID:25722434) BHF-UCL PMID:25722434 MGI:5811980 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,178,969
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog involved_in IDA (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir100 microRNA 100 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr 9:41,442,721...41,442,800
Ensembl chr 9:41,442,721...41,442,800
JBrowse link
G Mir15b microRNA 15b involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr 3:68,917,105...68,917,168
Ensembl chr 3:68,917,105...68,917,168
JBrowse link
G Mir221 microRNA 221 involved_in ISO (PMID:18548003), (PMID:19088079) BHF-UCL PMID:18548003 PMID:19088079 NCBI chr  X:19,012,533...19,012,627
Ensembl chr  X:19,012,533...19,012,627
JBrowse link
G Mir26a-1 microRNA 26a-1 involved_in ISO (PMID:20857419) BHF-UCL PMID:20857419 NCBI chr 9:118,860,864...118,860,953
Ensembl chr 9:118,860,864...118,860,953
JBrowse link
G Mir26a-2 microRNA 26a-2 involved_in ISO (PMID:20857419) BHF-UCL PMID:20857419 NCBI chr10:126,831,399...126,831,482
Ensembl chr10:126,831,399...126,831,482
JBrowse link
G Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:80,649,418...80,756,286
Ensembl chr18:80,649,420...80,756,286
JBrowse link
G Nfatc2 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:168,318,330...168,443,900
Ensembl chr 2:168,318,330...168,443,577
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:53,880,662...53,926,024
Ensembl chr19:53,880,662...53,918,291
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase (cytosine-5) 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:20,818,501...20,871,184
Ensembl chr 9:20,818,505...20,871,184
JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:58,308,131...58,350,311
Ensembl chr14:58,308,004...58,350,177
JBrowse link
positive regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cth cystathionase (cystathionine gamma-lyase) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714
JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in IMP (MGI:4947512|PMID:20019329) UniProt PMID:20019329 MGI:4947512 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545
JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:139,408,905...139,413,555
Ensembl chr 5:139,408,906...139,413,555
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog involved_in IDA (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
positive regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir34a microRNA 34a involved_in ISO (PMID:25526086) BHF-UCL PMID:25526086 NCBI chr 4:150,152,911...150,153,012
Ensembl chr 4:150,152,911...150,153,012
JBrowse link
G Myocd myocardin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Olfm2 olfactomedin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:20,578,986...20,657,660
Ensembl chr 9:20,578,986...20,657,645
JBrowse link
G Pias1 protein inhibitor of activated STAT 1 involved_in ISO RGD
MGI
PMID:16135793 GO_REF:0000096 MGI:4417868 RGD:2303115 NCBI chr 9:62,785,648...62,888,161
Ensembl chr 9:62,785,650...62,895,206
JBrowse link
G Sirt1 sirtuin 1 involved_in IMP (MGI:5810254|PMID:25526086) BHF-UCL PMID:25526086 MGI:5810254 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in ISO RGD
MGI
PMID:23110084 GO_REF:0000096 MGI:4417868 RGD:9586362 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:81256|PMID:8616889) MGI PMID:8616889 MGI:81256 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tmsb4x thymosin, beta 4, X chromosome involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr  X:165,990,089...165,996,475
Ensembl chr  X:165,990,089...165,992,311
JBrowse link
G Tshz3 teashirt zinc finger family member 3 acts_upstream_of_or_within IMP (MGI:3806378|PMID:18776146) MGI PMID:18776146 MGI:3806378 NCBI chr 7:36,397,543...36,472,978
Ensembl chr 7:36,397,543...36,472,978
JBrowse link
positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myocd myocardin involved_in ISO (PMID:15907818) BHF-UCL PMID:15907818 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog involved_in IMP (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in IMP (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Mir125b-1 microRNA 125b-1 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr 9:41,493,222...41,493,298
Ensembl chr 9:41,493,222...41,493,298
JBrowse link
G Mir125b-2 microRNA 125b-2 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr16:77,443,161...77,443,231
Ensembl chr16:77,443,161...77,443,231
JBrowse link
G Mir21a microRNA 21a involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir140 microRNA 140 involved_in ISO (PMID:27021683) BHF-UCL PMID:27021683 NCBI chr 8:108,277,876...108,277,945
Ensembl chr 8:108,277,876...108,277,945
JBrowse link
G Sod2 superoxide dismutase 2, mitochondrial involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:13,226,726...13,237,006
Ensembl chr17:13,225,733...13,258,950
JBrowse link
regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdc4 syndecan 4 NOT|involved_in ISO PMID:25089138 BHF-UCL PMID:25089138 RGD:11079193 NCBI chr 2:164,266,167...164,285,512
Ensembl chr 2:164,266,167...164,285,807
JBrowse link
regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA
IGI
(MGI:3766861|PMID:17881493) MGI PMID:17881493 MGI:3766861 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (MGI:3688953|PMID:16989802) MGI PMID:16989802 MGI:3688953 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Myocd myocardin involved_in ISO RGD
MGI
PMID:12756293 GO_REF:0000096 MGI:4417868 RGD:1299358 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (MGI:3641341|PMID:16824956) MGI PMID:16824956 MGI:3641341 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (MGI:4437379|PMID:20110314) MGI PMID:20110314 MGI:4437379 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (MGI:4848001|PMID:20881014) MGI PMID:20881014 MGI:4848001 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tshz3 teashirt zinc finger family member 3 involved_in IMP (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr 7:36,397,543...36,472,978
Ensembl chr 7:36,397,543...36,472,978
JBrowse link
vascular associated smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in IMP (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027
JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within IMP (MGI:5318950|PMID:21350216) MGI PMID:21350216 MGI:5318950 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716
JBrowse link
G Ednra endothelin receptor type A involved_in IMP (MGI:5585582|PMID:24412386) MGI PMID:24412386 MGI:5585582 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in IMP (MGI:5584046|PMID:23636094) UniProt PMID:23636094 MGI:5584046 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545
JBrowse link
G Eng endoglin involved_in IMP (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IMP (MGI:4453944|PMID:20122914) BHF-UCL PMID:20122914 MGI:4453944 NCBI chr16:29,884,175...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 acts_upstream_of_or_within IGI (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 acts_upstream_of_or_within IGI (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400
JBrowse link
G Ramp2 receptor (calcitonin) activity modifying protein 2 involved_in IMP (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chr11:101,137,160...101,139,076
Ensembl chr11:101,136,854...101,150,372
JBrowse link
G Sgcb sarcoglycan, beta (dystrophin-associated glycoprotein) acts_upstream_of_or_within IMP (MGI:1352919|PMID:10678176) MGI PMID:10678176 MGI:1352919 NCBI chr 5:73,790,092...73,805,080
Ensembl chr 5:73,790,092...73,805,133
JBrowse link
vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor involved_in IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267
JBrowse link
G C3 complement component 3 acts_upstream_of_or_within IGI (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr17:57,510,967...57,535,136
Ensembl chr17:57,510,970...57,535,136
JBrowse link
G Cfd complement factor D (adipsin) acts_upstream_of_or_within IGI (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr10:79,726,687...79,728,489
Ensembl chr10:79,726,687...79,728,489
JBrowse link
G Cfh complement component factor h acts_upstream_of_or_within IMP
IGI
(MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502
JBrowse link
G Epc1 enhancer of polycomb homolog 1 ISO RGD PMID:22398275 RGD:9587795 NCBI chr18:6,435,951...6,516,108
Ensembl chr18:6,435,951...6,516,108
JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within IMP (MGI:3607644|PMID:16204380) MGI PMID:16204380 MGI:3607644 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393
JBrowse link
G Myocd myocardin involved_in IGI (MGI:4354665|PMID:19578358) BHF-UCL PMID:19578358 MGI:4354665 NCBI chr11:65,064,434...65,160,815
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 acts_upstream_of_or_within IGI (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 acts_upstream_of_or_within IGI (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (MGI:3796777|PMID:18458156) MGI PMID:18458156 MGI:3796777 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
JBrowse link
G Qki quaking, KH domain containing RNA binding acts_upstream_of_or_within IMP (MGI:3029686|PMID:14706070) MGI PMID:14706070 MGI:3029686 NCBI chr17:10,425,400...10,538,706
Ensembl chr17:10,421,530...10,538,783
JBrowse link

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