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ONTOLOGY REPORT - ANNOTATIONS


Term:smooth muscle cell differentiation
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Accession:GO:0051145 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary.
Synonyms:exact_synonym: nonstriated muscle cell differentiation



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smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (MGI:1313232|PMID:9788961) MGI PMID:9788961 MGI:1313232 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624584|PMID:16546160) MGI
Ensembl
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4359548|PMID:19690384) Ensembl
Ensembl
MGI
PMID:19690384 GO_REF:0000107 MGI:4359548 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3716020|PMID:17560563) Ensembl
Ensembl
MGI
PMID:17560563 GO_REF:0000107 MGI:3716020 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3766861|PMID:17881493)
(MGI:2135612|PMID:11493558), (MGI:3766861|PMID:17881493)
Ensembl
Ensembl
MGI
PMID:11493558 PMID:17881493 GO_REF:0000107 MGI:2135612 MGI:3766861 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
JBrowse link
G GATA6 GATA binding protein 6 involved_in IMP (PMID:17626241) UniProt
UniProt
PMID:17626241 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in NAS (PMID:10692439) BHF-UCL
BHF-UCL
PMID:10692439 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:15,513,954...15,719,922
Ensembl chr10:15,513,954...15,719,922
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1298294|PMID:9778514) UniProt
UniProt
MGI
PMID:9778514 GO_REF:0000024 MGI:1298294 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MRTFA myocardin related transcription factor A involved_in IBA
IMP
(PMID:21873635)
(PMID:14970199)
GO_Central
GO_Central
BHF-UCL
BHF-UCL
PMID:14970199 PMID:21873635 NCBI chr22:40,410,289...40,636,719
Ensembl chr22:40,410,281...40,636,719
JBrowse link
G MRTFB myocardin related transcription factor B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:13,994,774...14,266,779
Ensembl chr16:14,071,319...14,266,773
JBrowse link
G MYOCD myocardin involved_in
acts_upstream_of_or_within
IMP
ISO
IDA
IBA
IEA
(PMID:14970199)
(MGI:2670236|PMID:12867591), (MGI:4941650|PMID:21357509)
(PMID:15907818)
(PMID:21873635)
(MGI:3773460|PMID:18188448)
BHF-UCL
MGI
BHF-UCL
GO_Central
Ensembl
RGD
GO_Central
PMID:12392995 PMID:12867591 PMID:14970199 PMID:15907818 PMID:18188448 More... GO_REF:0000107 MGI:2670236 MGI:3773460 MGI:4941650 RGD:1299359 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G NPNT nephronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (MGI:3505802|PMID:15497153) MGI PMID:15497153 MGI:3505802 NCBI chr12:5,430,332...5,495,299
Ensembl chr12:5,432,108...5,521,536
JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISS ARUK-UCL
ARUK-UCL
GO_REF:0000024 NCBI chr 6:84,732,496...84,764,598
Ensembl chr 6:84,687,351...84,764,598
JBrowse link
G TBX2 T-box transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6284231|PMID:30478225) Ensembl
Ensembl
MGI
PMID:30478225 GO_REF:0000107 MGI:6284231 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6284231|PMID:30478225) Ensembl
Ensembl
MGI
PMID:30478225 GO_REF:0000107 MGI:6284231 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
G TMEM204 transmembrane protein 204 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:4443218|PMID:20439428)
GO_Central
Ensembl
GO_Central
MGI
PMID:20439428 PMID:21873635 GO_REF:0000107 MGI:4443218 NCBI chr16:1,528,678...1,555,568
Ensembl chr16:1,528,688...1,555,580
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624584|PMID:16546160) Ensembl
Ensembl
MGI
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (MGI:4359548|PMID:19690384) MGI PMID:19690384 MGI:4359548 NCBI chr22:45,920,366...45,977,162
Ensembl chr22:45,920,366...45,977,162
JBrowse link
aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 acts_upstream_of_or_within ISO (MGI:5007924|PMID:19342595) MGI PMID:19342595 MGI:5007924 NCBI chr 9:2,015,347...2,193,624
Ensembl chr 9:1,980,290...2,193,624
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:5007924|PMID:19342595) MGI PMID:19342595 MGI:5007924 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426
JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4838384|PMID:20619341) Ensembl
Ensembl
MGI
PMID:20619341 GO_REF:0000107 MGI:4838384 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in IMP (PMID:11889139), (PMID:12615657) UniProt
UniProt
PMID:11889139 PMID:12615657 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IMP (PMID:18297060) BHF-UCL
BHF-UCL
PMID:18297060 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
G MIR143 microRNA 143 acts_upstream_of_or_within ISO (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr 5:149,428,918...149,429,023
Ensembl chr 5:149,428,918...149,429,023
JBrowse link
G MIR145 microRNA 145 acts_upstream_of_or_within ISO (MGI:4443305|PMID:19816508) MGI PMID:19816508 MGI:4443305 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733
JBrowse link
G MYOCD myocardin involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513738|PMID:15569937) Ensembl
Ensembl
MGI
PMID:15569937 GO_REF:0000107 MGI:3513738 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
enteric smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr19:31,149,876...31,350,877
Ensembl chr19:31,149,979...31,349,436
JBrowse link
negative regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR21 microRNA 21 involved_in IDA (PMID:22034194) BHF-UCL PMID:22034194 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
negative regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
negative regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD17 ankyrin repeat domain 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360129|PMID:19619540) Ensembl
Ensembl
MGI
PMID:19619540 GO_REF:0000107 MGI:4360129 NCBI chr 4:73,073,376...73,258,798
Ensembl chr 4:73,073,376...73,258,798
JBrowse link
G EREG epiregulin involved_in IDA (PMID:14581411) UniProt
UniProt
PMID:14581411 NCBI chr 4:74,365,145...74,388,749
Ensembl chr 4:74,365,145...74,388,749
JBrowse link
G FOXO4 forkhead box O4 involved_in IDA (PMID:16054032) UniProt
UniProt
PMID:16054032 NCBI chr  X:71,095,851...71,103,532
Ensembl chr  X:71,095,851...71,103,532
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G MED28 mediator complex subunit 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3762062|PMID:17848560) Ensembl
Ensembl
MGI
PMID:17848560 GO_REF:0000107 MGI:3762062 NCBI chr 4:17,614,641...17,634,105
Ensembl chr 4:17,614,641...17,634,105
JBrowse link
G MIR199B microRNA 199b involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 9:128,244,721...128,244,830
Ensembl chr 9:128,244,721...128,244,830
JBrowse link
G PRDM6 PR/SET domain 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619789|PMID:16537907) Ensembl
Ensembl
MGI
PMID:16537907 GO_REF:0000107 MGI:3619789 NCBI chr 5:123,089,241...123,194,266
Ensembl chr 5:123,089,241...123,194,266
JBrowse link
G RBPMS2 RNA binding protein, mRNA processing factor 2 involved_in IBA
ISS
IMP
(PMID:21873635)
(PMID:25064856)
GO_Central
UniProt
GO_Central
UniProt
PMID:21873635 PMID:25064856 GO_REF:0000024 NCBI chr15:64,739,891...64,775,589
Ensembl chr15:64,739,891...64,775,589
JBrowse link
G RCAN1 regulator of calcineurin 1 ISO RGD PMID:15148306 RGD:1581653 NCBI chr21:34,516,442...34,615,113
Ensembl chr21:34,513,142...34,615,113
JBrowse link
negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in IDA (PMID:18239137) BHF-UCL
BHF-UCL
PMID:18239137 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR100 microRNA 100 involved_in IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr11:122,152,229...122,152,308
Ensembl chr11:122,152,229...122,152,308
JBrowse link
G MIR15B microRNA 15b involved_in IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr 3:160,404,588...160,404,685
Ensembl chr 3:160,404,588...160,404,685
JBrowse link
G MIR221 microRNA 221 involved_in IMP (PMID:18548003), (PMID:19088079) BHF-UCL PMID:18548003 PMID:19088079 NCBI chr  X:45,746,157...45,746,266
Ensembl chr  X:45,746,157...45,746,266
JBrowse link
G MIR26A1 microRNA 26a-1 involved_in IDA (PMID:20857419) BHF-UCL PMID:20857419 NCBI chr 3:37,969,404...37,969,480
Ensembl chr 3:37,969,404...37,969,480
JBrowse link
G MIR26A2 microRNA 26a-2 involved_in IDA (PMID:20857419) BHF-UCL PMID:20857419 NCBI chr12:57,824,609...57,824,692
Ensembl chr12:57,824,609...57,824,692
JBrowse link
G NFATC1 nuclear factor of activated T cells 1 involved_in IDA (PMID:23853098) BHF-UCL
BHF-UCL
PMID:23853098 NCBI chr18:79,395,930...79,529,323
Ensembl chr18:79,395,856...79,529,325
JBrowse link
G NFATC2 nuclear factor of activated T cells 2 involved_in IDA (PMID:23853098) BHF-UCL
BHF-UCL
PMID:23853098 NCBI chr20:51,386,963...51,562,839
Ensembl chr20:51,386,957...51,562,831
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 involved_in IDA (PMID:23853098) BHF-UCL
BHF-UCL
PMID:23853098 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G PDCD4 programmed cell death 4 involved_in IDA (PMID:18548003) BHF-UCL
BHF-UCL
PMID:18548003 NCBI chr10:110,871,928...110,900,006
Ensembl chr10:110,871,795...110,900,006
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IDA (PMID:19088079) BHF-UCL
BHF-UCL
PMID:19088079 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT1 DNA methyltransferase 1 involved_in IMP (PMID:27021683) BHF-UCL
BHF-UCL
PMID:27021683 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G FGF9 fibroblast growth factor 9 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr13:21,671,073...21,704,498
Ensembl chr13:21,671,073...21,704,498
JBrowse link
positive regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTH cystathionine gamma-lyase involved_in IMP (PMID:21659522) BHF-UCL
BHF-UCL
PMID:21659522 NCBI chr 1:70,411,268...70,439,851
Ensembl chr 1:70,411,218...70,439,851
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592
JBrowse link
G MIR424 microRNA 424 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr  X:134,546,614...134,546,711
Ensembl chr  X:134,546,614...134,546,711
JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPER1 G protein-coupled estrogen receptor 1 involved_in IMP (PMID:23840305) AgBase
AgBase
PMID:23840305 NCBI chr 7:1,087,118...1,093,810
Ensembl chr 7:1,082,208...1,093,815
JBrowse link
G MIR1-1 microRNA 1-1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr20:62,554,306...62,554,376
Ensembl chr20:62,554,306...62,554,376
JBrowse link
G MIR1-2 microRNA 1-2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr18:21,829,004...21,829,088
Ensembl chr18:21,829,004...21,829,088
JBrowse link
G MIR145 microRNA 145 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733
JBrowse link
G MYOCD myocardin involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
positive regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR22 microRNA 22 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:1,713,903...1,713,987
Ensembl chr17:1,713,903...1,713,987
JBrowse link
G MIR34A microRNA 34a involved_in IDA (PMID:25526086) BHF-UCL PMID:25526086 NCBI chr 1:9,151,668...9,151,777
Ensembl chr 1:9,151,668...9,151,777
JBrowse link
G MYOCD myocardin involved_in IDA (PMID:18451334) BHF-UCL
BHF-UCL
PMID:18451334 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G OLFM2 olfactomedin 2 involved_in IMP (PMID:25298399) UniProt
UniProt
PMID:25298399 NCBI chr19:9,853,718...9,936,515
Ensembl chr19:9,853,718...9,936,515
JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO RGD PMID:16135793 RGD:2303115 NCBI chr15:68,054,315...68,193,847
Ensembl chr15:68,054,309...68,198,603
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ISO RGD PMID:23110084 RGD:9586362 NCBI chr 7:151,238,780...151,277,149
Ensembl chr 7:151,238,764...151,277,896
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
PMID:8616889 Ensembl
MGI
Ensembl
PMID:8616889 GO_REF:0000107 RGD:8553354 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (MGI:3806378|PMID:18776146) MGI PMID:18776146 MGI:3806378 NCBI chr19:31,149,876...31,350,877
Ensembl chr19:31,149,979...31,349,436
JBrowse link
positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGA8 integrin subunit alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:15,513,954...15,719,922
Ensembl chr10:15,513,954...15,719,922
JBrowse link
G MYOCD myocardin involved_in IDA (PMID:15907818) BHF-UCL PMID:15907818 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G NPNT nephronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENG endoglin involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IDA (PMID:19088079) BHF-UCL
BHF-UCL
PMID:19088079 NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783
JBrowse link
G MIR125B1 microRNA 125b-1 involved_in IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844
JBrowse link
G MIR125B2 microRNA 125b-2 involved_in IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325
JBrowse link
G MIR21 microRNA 21 involved_in IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR140 microRNA 140 involved_in IDA (PMID:27021683) BHF-UCL PMID:27021683 NCBI chr16:69,933,081...69,933,180
Ensembl chr16:69,933,081...69,933,180
JBrowse link
G MIR18A microRNA 18a involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr13:91,350,751...91,350,821
Ensembl chr13:91,350,751...91,350,821
JBrowse link
G SOD2 superoxide dismutase 2 involved_in IDA (PMID:27021683) BHF-UCL
BHF-UCL
PMID:27021683 NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529
JBrowse link
regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SDC4 syndecan 4 NOT|involved_in ISO PMID:25089138 BHF-UCL PMID:25089138 RGD:11079193 NCBI chr20:45,325,288...45,348,424
Ensembl chr20:45,325,288...45,348,424
JBrowse link
regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3766861|PMID:17881493) Ensembl
Ensembl
MGI
PMID:17881493 GO_REF:0000107 MGI:3766861 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3688953|PMID:16989802) UniProt
UniProt
MGI
PMID:16989802 GO_REF:0000024 MGI:3688953 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G MYOCD myocardin involved_in TAS
ISO
(PMID:17215356) BHF-UCL
BHF-UCL
RGD
PMID:12756293 PMID:17215356 RGD:1299358 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G SRF serum response factor involved_in TAS (PMID:17215356) BHF-UCL
BHF-UCL
PMID:17215356 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3641341|PMID:16824956) MGI
Ensembl
Ensembl
PMID:16824956 GO_REF:0000107 MGI:3641341 NCBI chr10:31,318,417...31,529,804
Ensembl chr10:31,318,495...31,529,814
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437379|PMID:20110314) Ensembl
Ensembl
MGI
PMID:20110314 GO_REF:0000107 MGI:4437379 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4848001|PMID:20881014) Ensembl
MGI
Ensembl
PMID:20881014 GO_REF:0000107 MGI:4848001 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chr19:31,149,876...31,350,877
Ensembl chr19:31,149,979...31,349,436
JBrowse link
vascular associated smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5318950|PMID:21350216) Ensembl
Ensembl
MGI
PMID:21350216 GO_REF:0000107 MGI:5318950 NCBI chr19:18,782,773...18,791,305
Ensembl chr19:18,782,773...18,791,305
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592
JBrowse link
G ENG endoglin involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEP (PMID:15821257) UniProt
UniProt
PMID:15821257 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:42,761,227...42,763,041
Ensembl chr17:42,758,447...42,763,041
JBrowse link
G SGCB sarcoglycan beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1352919|PMID:10678176) Ensembl
Ensembl
MGI
PMID:10678176 GO_REF:0000107 MGI:1352919 NCBI chr 4:52,020,706...52,038,299
Ensembl chr 4:52,020,706...52,038,299
JBrowse link
vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLNR apelin receptor involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:57,233,591...57,237,250
Ensembl chr11:57,233,577...57,237,250
JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CFD complement factor D acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr19:859,664...863,641
Ensembl chr19:859,453...867,884
JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G EPC1 enhancer of polycomb homolog 1 ISO RGD PMID:22398275 RGD:9587795 NCBI chr10:32,267,751...32,378,769
Ensembl chr10:32,267,751...32,378,798
JBrowse link
G MIR145 microRNA 145 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733
JBrowse link
G MRTFB myocardin related transcription factor B acts_upstream_of_or_within ISO (MGI:3607644|PMID:16204380) MGI PMID:16204380 MGI:3607644 NCBI chr16:13,994,774...14,266,779
Ensembl chr16:14,071,319...14,266,773
JBrowse link
G MYOCD myocardin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3796777|PMID:18458156) MGI PMID:18458156 MGI:3796777 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3029686|PMID:14706070) MGI
Ensembl
PMID:14706070 GO_REF:0000107 MGI:3029686 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link

Term paths to the root