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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA-binding transcription factor activity
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Accession:GO:0051090 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.
Synonyms:exact_synonym: regulation of sequence-specific DNA binding transcription factor activity
 narrow_synonym: regulation of androgen receptor activity;   regulation of thyroid hormone receptor activity
 broad_synonym: regulation of transcription factor activity
 alt_id: GO:1904167;   GO:2000823



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regulation of DNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2h3orf33 similar to human chromosome 3 open reading frame 33 involved_in ISO (PMID:20680465) RGD PMID:20680465 NCBI chr 2:148,376,598...148,404,343
Ensembl chr 2:148,380,581...148,404,387
JBrowse link
G Carf calcium responsive transcription factor acts_upstream_of_or_within ISO MGI:104738 (PMID:12154087) RGD PMID:12154087 NCBI chr 9:61,502,368...61,552,433
Ensembl chr 9:61,506,956...61,550,462
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A acts_upstream_of_or_within ISO MGI:2182269 (PMID:12154087) RGD PMID:12154087 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Crebzf CREB/ATF bZIP transcription factor involved_in ISO (PMID:15705566) RGD PMID:15705566 NCBI chr 1:144,416,864...144,423,540
Ensembl chr 1:144,417,446...144,428,553
JBrowse link
G Fanca FA complementation group A acts_upstream_of_or_within ISO MGI:2674094 (PMID:24501220) RGD PMID:24501220 NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527
JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO MGI:2673422 (PMID:24501220) RGD PMID:24501220 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:17535448) RGD PMID:17535448 NCBI chr 3:141,571,587...141,614,696
Ensembl chr 3:141,571,587...141,614,693
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:22275377 RGD:153297769 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (PMID:18270511) RGD PMID:18270511 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm8 lysine demethylase 8 acts_upstream_of_or_within ISO MGI:5311829 (PMID:26334721) RGD PMID:26334721 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:7889942) RGD PMID:7889942 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:27880909) RGD PMID:27880909 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:9448000)
UniProt
RGD
PMID:9448000 GO_REF:0000024 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:9448000)
UniProt
RGD
PMID:9448000 GO_REF:0000024 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO MGI:2447148 (PMID:27880909) RGD PMID:27880909 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:29924977) RGD PMID:29924977 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Stk36 serine/threonine kinase 36 involved_in ISO (PMID:10806483) RGD PMID:10806483 NCBI chr 9:76,176,922...76,204,423
Ensembl chr 9:76,176,920...76,204,422
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:23071339) RGD PMID:23071339 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:16964248)
UniProt
RGD
PMID:16964248 GO_REF:0000024 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISS
ISO
GO_REF:0000024
(PMID:29813070)
UniProt
RGD
PMID:29813070 GO_REF:0000024 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:2180720 (PMID:22234993) RGD PMID:22234993 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746
JBrowse link
cytoplasmic sequestering of NF-kappaB term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc22 coiled-coil domain containing 22 involved_in ISO (PMID:23563313) RGD PMID:23563313 NCBI chr  X:14,898,296...14,910,244
Ensembl chr  X:14,898,296...14,910,244
JBrowse link
G Faf1 Fas associated factor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:14600157)
UniProt
RGD
PMID:14600157 GO_REF:0000024 NCBI chr 5:124,426,032...124,790,014
Ensembl chr 5:124,426,062...124,789,977
JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in IMP
ISO
(PMID:16938301) RGD PMID:16938301 PMID:9918814 PMID:16580131 PMID:9343439 PMID:10620707 RGD:2298880, RGD:2298917, RGD:2298908, RGD:2298882 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Nfkbib NFKB inhibitor beta IMP RGD PMID:9343439 PMID:16580131 RGD:2298908, RGD:2298917 NCBI chr 1:84,046,292...84,053,862
Ensembl chr 1:84,046,295...84,053,862
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISS
ISO
GO_REF:0000024
(PMID:18040287)
UniProt
RGD
PMID:18040287 GO_REF:0000024 NCBI chr  X:104,656,809...104,665,122
Ensembl chr  X:104,656,812...104,665,097
JBrowse link
cytoplasmic sequestering of transcription factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) RGD PMID:20091349 NCBI chr 5:57,817,865...57,823,233
Ensembl chr 5:57,817,832...57,824,390
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 IMP RGD PMID:11439354 RGD:727319 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
JBrowse link
G Sri sorcin involved_in ISO (PMID:22338092) RGD PMID:22338092 NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:95727|MGI:95728 (PMID:16316410) RGD PMID:16316410 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:11025203) RGD PMID:11025203 NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219
JBrowse link
negative regulation of CREB transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (PMID:24113187) RGD PMID:24113187 NCBI chr19:9,972,425...10,001,118
Ensembl chr19:9,972,430...10,001,123
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IDA RGD PMID:15829559 RGD:1599733 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16121183)
UniProt
RGD
PMID:16121183 GO_REF:0000024 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:16652169) RGD PMID:16652169 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:15175325) RGD PMID:15175325 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12200423), (PMID:16148943), (PMID:23993098)
UniProt
RGD
PMID:12200423 PMID:16148943 PMID:23993098 GO_REF:0000024 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
JBrowse link
negative regulation of DNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO (PMID:18411297) RGD PMID:18411297 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO
PMID:7501458
(PMID:7501458)
RGD PMID:7501458 PMID:7501458 RGD:8554148 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 involved_in ISO (PMID:18977368)
(PMID:11751639)
RGD PMID:11751639 PMID:18977368 NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
JBrowse link
G Cys1 cystin 1 acts_upstream_of_or_within ISO (PMID:24349431) RGD PMID:24349431 NCBI chr 6:41,300,836...41,318,071
Ensembl chr 6:41,300,836...41,318,071
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IDA
ISO
(PMID:16956324) RGD PMID:16956324 PMID:20308610 RGD:6483365 NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:22164283) RGD PMID:22164283 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Esr1 estrogen receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:10816575)
UniProt
RGD
PMID:10816575 GO_REF:0000024 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:102858 (PMID:25547114) RGD PMID:25547114 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Flna filamin A involved_in ISO (PMID:15684392) RGD PMID:15684392 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Foxa2 forkhead box A2 involved_in ISO (PMID:12642491) RGD PMID:12642491 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (PMID:16120611) RGD PMID:16120611 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:16873067) RGD PMID:16873067 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Foxs1 forkhead box S1 involved_in ISO (PMID:18288644) RGD PMID:18288644 NCBI chr 3:141,397,012...141,398,296
Ensembl chr 3:141,397,016...141,398,281
JBrowse link
G Fzd6 frizzled class receptor 6 involved_in ISO (PMID:14747478) RGD PMID:14747478 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776
JBrowse link
G Glis2 GLIS family zinc finger 2 involved_in ISO (PMID:21127075) RGD PMID:21127075 NCBI chr10:10,951,157...10,978,524
Ensembl chr10:10,951,371...10,971,578
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11802795)
(PMID:19144722)
RGD PMID:11802795 PMID:19144722 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (PMID:19144722) RGD PMID:19144722 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:19041327) RGD PMID:19041327 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac3 histone deacetylase 3 acts_upstream_of_or_within ISO (PMID:24565863) RGD PMID:24565863 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:18850004) RGD PMID:18850004 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (PMID:10851137) RGD PMID:10851137 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes6 hes family bHLH transcription factor 6 involved_in ISO (PMID:10851137) RGD PMID:10851137 NCBI chr 9:92,001,849...92,003,562
Ensembl chr 9:92,001,841...92,003,559
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in ISO (PMID:21454491) RGD PMID:21454491 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:17234154 RGD:1601626 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA STAT5b RGD PMID:16584384 RGD:1625011 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor IDA RGD PMID:11641275 RGD:1599577 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
JBrowse link
G Id1 inhibitor of DNA binding 1 involved_in ISO (PMID:15138269), (PMID:7665172) RGD PMID:7665172 PMID:15138269 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:14627819) RGD PMID:14627819 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in ISO (PMID:14627819) RGD PMID:14627819 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO (PMID:23906066) RGD PMID:23906066 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 acts_upstream_of_or_within ISO (PMID:15082713) RGD PMID:15082713 NCBI chr 4:146,786,004...146,842,615
Ensembl chr 4:146,786,100...146,842,602
JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO MGI:4418468 (PMID:22921202) RGD PMID:22921202 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17805299), (PMID:19497860) RGD PMID:17805299 PMID:19497860 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO (PMID:24129709) RGD PMID:24129709 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:19443654) RGD PMID:19443654 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
JBrowse link
G Map3k10 mitogen activated protein kinase kinase kinase 10 involved_in ISO (PMID:19801649) RGD PMID:19801649 NCBI chr 1:82,955,784...82,974,084
Ensembl chr 1:82,955,207...82,974,084
JBrowse link
G Med13 mediator complex subunit 13 involved_in ISO (PMID:22541436) RGD PMID:22541436 NCBI chr10:71,086,978...71,176,535
Ensembl chr10:71,090,516...71,177,242
JBrowse link
G Men1 menin 1 involved_in ISO (PMID:11526476), (PMID:12226747) RGD PMID:11526476 PMID:12226747 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mir101-2 microRNA 101-2 acts_upstream_of ISO (PMID:30692230) RGD PMID:30692230 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir101a microRNA 101a acts_upstream_of ISO (PMID:30692230) RGD PMID:30692230 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410
JBrowse link
G Mir133b microRNA 133b involved_in ISO (PMID:24443799) RGD PMID:24443799 NCBI chr 9:23,098,134...23,098,217
Ensembl chr 9:23,098,134...23,098,217
JBrowse link
G Mir144 microRNA 144 acts_upstream_of ISO (PMID:27785072) RGD PMID:27785072 NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:3586988 (PMID:12198120), (PMID:22514318) RGD PMID:12198120 PMID:22514318 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 involved_in IMP
ISO
(PMID:19651776) RGD PMID:19651776 PMID:12697699 RGD:1624302 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:14752053)
UniProt
RGD
PMID:14752053 GO_REF:0000024 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 PMID:20181828 GO_REF:0000024, RGD:14390062 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:11940591) RGD PMID:11940591 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Pbx1 PBX homeobox 1 involved_in ISO (PMID:15684392) RGD PMID:15684392 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:11863372) RGD PMID:11863372 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:18629613) RGD PMID:18629613 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 involved_in ISO (PMID:20408817) RGD PMID:20408817 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:18593906) RGD PMID:18593906 NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in ISO (PMID:20844270) RGD PMID:20844270 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:8537352)
UniProt
RGD
PMID:8537352 GO_REF:0000024 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in ISO (PMID:16616919) RGD PMID:16616919 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643
JBrowse link
G Prnp prion protein involved_in ISO (PMID:20145049) RGD PMID:20145049 NCBI chr 3:119,186,073...119,201,513
Ensembl chr 3:119,177,485...119,203,937
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:15205472), (PMID:16488887) RGD PMID:15205472 PMID:16488887 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:16229683) RGD PMID:16229683 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within ISO (PMID:17328886) RGD PMID:17328886 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
JBrowse link
G Pura purine rich element binding protein A involved_in ISO (PMID:10597240) RGD PMID:10597240 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513
JBrowse link
G Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 acts_upstream_of_negative_effect ISO (PMID:12200424) RGD PMID:12200424 NCBI chr 6:72,977,432...73,252,378
Ensembl chr 6:72,977,432...73,252,378
JBrowse link
G Rlim ring finger protein, LIM domain interacting acts_upstream_of_or_within ISO MGI:894670 (PMID:10431247) RGD PMID:10431247 NCBI chr  X:68,983,259...69,004,368
Ensembl chr  X:68,988,375...69,004,271
JBrowse link
G Rnf2 ring finger protein 2 involved_in ISO (PMID:18629613) RGD PMID:18629613 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
JBrowse link
G Rpl11 ribosomal protein L11 IDA RGD PMID:16280383 RGD:11035228 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 involved_in ISO (PMID:18945944) RGD PMID:18945944 NCBI chr17:45,278,867...45,330,806
Ensembl chr17:45,234,097...45,330,736
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:11672523), (PMID:20955178)
(PMID:20955178)
RGD PMID:11672523 PMID:20955178 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:15247905) RGD PMID:15247905 NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034
JBrowse link
G Spop speckle type BTB/POZ protein acts_upstream_of_or_within ISO (PMID:15121856) RGD PMID:15121856 NCBI chr10:80,358,121...80,438,983
Ensembl chr10:80,358,124...80,483,955
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (PMID:12072434) RGD PMID:12072434 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Taf3 TATA-box binding protein associated factor 3 involved_in ISO (PMID:18549481) RGD PMID:18549481 NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
JBrowse link
G Tbx6 T-box transcription factor 6 involved_in ISO (PMID:22164283) RGD PMID:22164283 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593
JBrowse link
G Tbxt T-box transcription factor T involved_in ISO (PMID:22164283) RGD PMID:22164283 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
JBrowse link
G Tcf7l2 transcription factor 7 like 2 involved_in ISO (PMID:12799378) RGD PMID:12799378 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Thra thyroid hormone receptor alpha IDA RGD PMID:2537467 RGD:1580107 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
G Thra_v2 thyroid hormone receptor alpha, variant 2 IDA RGD PMID:2537467 RGD:1580107
G Tnfrsf4 TNF receptor superfamily member 4 involved_in ISO (PMID:7749983) RGD PMID:7749983 NCBI chr 5:166,606,909...166,609,599
Ensembl chr 5:166,606,909...166,609,599
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:7749983) RGD PMID:7749983 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (PMID:15299019)
(PMID:17724128)
RGD PMID:15299019 PMID:17724128 NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:15047715) RGD PMID:15047715 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:10887101) RGD PMID:10887101 NCBI chr13:77,248,687...77,252,343
Ensembl chr13:77,248,717...77,252,329
JBrowse link
negative regulation of hh target transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:30111653)
UniProt
RGD
PMID:30111653 GO_REF:0000024 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
negative regulation of NF-kappaB transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450) RGD PMID:23609450 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Adora3 adenosine A3 receptor involved_in ISO (PMID:27886186) RGD PMID:27886186 NCBI chr 2:193,352,759...193,392,946
Ensembl chr 2:193,388,713...193,392,357
JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:16432157) RGD PMID:16432157 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Anxa4 annexin A4 involved_in ISO (PMID:20237821) RGD PMID:20237821 NCBI chr 4:119,184,378...119,241,183
Ensembl chr 4:119,184,374...119,241,161
JBrowse link
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:16378096) RGD PMID:16378096 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Arrb2 arrestin, beta 2 involved_in ISO (PMID:15125834), (PMID:16378096) RGD PMID:15125834 PMID:16378096 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Bcl3 BCL3, transcription coactivator involved_in ISO (PMID:16306601) RGD PMID:16306601 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Brms1 BRMS1, transcriptional repressor and anoikis regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:17000776)
UniProt
RGD
PMID:17000776 GO_REF:0000024 NCBI chr 1:202,345,766...202,355,028
Ensembl chr 1:202,345,704...202,355,028
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Cat catalase acts_upstream_of_or_within ISO (PMID:9600348) RGD PMID:9600348 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
JBrowse link
G Cd200 Cd200 molecule involved_in ISO (PMID:26670206) RGD PMID:26670206 NCBI chr11:55,410,166...55,437,527
Ensembl chr11:55,410,196...55,501,648
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:17785205), (PMID:20228063)
UniProt
RGD
PMID:17785205 PMID:20228063 GO_REF:0000024 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:10353611) RGD PMID:10353611 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:10593895)
UniProt
RGD
PMID:10593895 GO_REF:0000024 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Cmklr1 chemerin chemokine-like receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15753205)
UniProt
RGD
PMID:15753205 GO_REF:0000024 NCBI chr12:42,974,462...43,027,321
Ensembl chr12:42,974,410...43,028,129
JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15799966), (PMID:17183367)
(PMID:16573520)
RGD PMID:15799966 PMID:16573520 PMID:17183367 NCBI chr14:96,880,463...96,984,494
Ensembl chr14:96,880,463...96,984,501
JBrowse link
G Commd6 COMM domain containing 6 acts_upstream_of_or_within ISO (PMID:16573520) RGD PMID:16573520 NCBI chr15:78,467,333...78,474,382
Ensembl chr15:78,467,804...78,474,382
JBrowse link
G Commd7 COMM domain containing 7 involved_in ISO (PMID:15799966) RGD PMID:15799966 NCBI chr 3:142,099,566...142,114,348
Ensembl chr 3:142,099,251...142,114,317
JBrowse link
G Coro1a coronin 1A involved_in ISO (PMID:25093672) RGD PMID:25093672 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISS
ISO
GO_REF:0000024
(PMID:18313383)
UniProt
RGD
PMID:18313383 GO_REF:0000024 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:23568032)
UniProt
RGD
PMID:23568032 GO_REF:0000024 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
GO_REF:0000024
(PMID:20154697)
UniProt
RGD
PMID:20154697 GO_REF:0000024 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Dap death-associated protein involved_in ISO (PMID:1087798) RGD PMID:1087798 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11927590) RGD PMID:11927590 NCBI chr10:10,854,732...10,880,171
Ensembl chr10:10,854,732...10,880,161
JBrowse link
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728) RGD PMID:16203728 NCBI chr 2:34,926,962...35,028,440
Ensembl chr 2:34,928,863...35,027,852
JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (PMID:16002694) RGD PMID:16002694 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:16652169) RGD PMID:16652169 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:20547752) RGD PMID:20547752 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:22842346) RGD PMID:22842346 NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in ISO (PMID:10383454) RGD PMID:10383454 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 involved_in ISO (PMID:10383454) RGD PMID:10383454 NCBI chr 4:146,786,004...146,842,615
Ensembl chr 4:146,786,100...146,842,602
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (PMID:10383454), (PMID:18156187) RGD PMID:10383454 PMID:18156187 NCBI chr 7:55,653,949...55,714,371
Ensembl chr 7:55,653,962...55,713,121
JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (PMID:18246070) RGD PMID:18246070 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543
JBrowse link
G Lrrc14 leucine rich repeat containing 14 involved_in ISS
ISO
GO_REF:0000024
(PMID:27426725)
UniProt
RGD
PMID:27426725 GO_REF:0000024 NCBI chr 7:108,430,755...108,437,118
Ensembl chr 7:108,430,792...108,437,111
JBrowse link
G Mir140 microRNA 140 acts_upstream_of ISO (PMID:30233718) RGD PMID:30233718 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir16 microRNA 16 involved_in ISO (PMID:30365148) RGD PMID:30365148 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
JBrowse link
G Mir21 microRNA 21 acts_upstream_of ISO UniProtKB:P01584 (PMID:25327529) RGD PMID:25327529 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir27a microRNA 27a acts_upstream_of ISO UniProtKB:P01584 (PMID:25327529) RGD PMID:25327529 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mturn maturin, neural progenitor differentiation regulator homolog involved_in ISO (PMID:24681962) RGD PMID:24681962 NCBI chr 4:83,807,528...83,828,494
Ensembl chr 4:83,807,579...83,824,950
JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (PMID:11931770) RGD PMID:11931770 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) RGD PMID:11931770 NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20829348)
UniProt
RGD
PMID:20829348 GO_REF:0000024 NCBI chr20:3,589,974...3,608,348
Ensembl chr20:3,590,642...3,605,616
JBrowse link
G Nlrc3 NLR family, CARD domain containing 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:15705585)
UniProt
RGD
PMID:15705585 GO_REF:0000024 NCBI chr10:11,551,378...11,585,027
Ensembl chr10:11,551,356...11,584,398
JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 involved_in ISO (PMID:20434986) RGD PMID:20434986 NCBI chr19:10,477,638...10,581,023
Ensembl chr19:10,477,628...10,562,121
JBrowse link
G Nlrp12 NLR family, pyrin domain containing 12 involved_in ISO (PMID:18230725) RGD PMID:18230725 NCBI chr 1:65,932,610...65,969,873
Ensembl chr 1:65,932,595...65,960,934
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:2680581 (PMID:15220916) RGD PMID:15220916 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (PMID:18972444) RGD PMID:18972444 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nwd1 NACHT and WD repeat domain containing 1 involved_in ISO (PMID:24681825) RGD PMID:24681825 NCBI chr16:17,166,479...17,242,055
Ensembl chr16:17,170,659...17,252,705
JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in ISO (PMID:23746843), (PMID:23806334), (PMID:24726327), (PMID:27523608), (PMID:27559085), (PMID:35170849), (PMID:35587511)
(PMID:27523608)
RGD PMID:23746843 PMID:23806334 PMID:24726327 PMID:27523608 PMID:27559085 More... NCBI chr 2:78,290,437...78,316,633
Ensembl chr 2:78,290,959...78,316,422
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:23575687) RGD PMID:23575687 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:4361448 (PMID:21874024) RGD PMID:21874024 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO (PMID:16816390) RGD PMID:16816390 NCBI chr 7:8,546,312...8,559,838
Ensembl chr 7:8,546,312...8,559,808
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:21300060) RGD PMID:21300060 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta involved_in ISO UniProtKB:Q04206 (PMID:28159925) RGD PMID:28159925 NCBI chr16:58,558,119...58,579,325
Ensembl chr16:58,558,122...58,579,576
JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO MGI:2668456 (PMID:17325201) RGD PMID:17325201 NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in ISO (PMID:16648481) RGD PMID:16648481 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISS
ISO
GO_REF:0000024
(PMID:18040287)
UniProt
RGD
PMID:18040287 GO_REF:0000024 NCBI chr  X:104,656,809...104,665,122
Ensembl chr  X:104,656,812...104,665,097
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISS
ISO
GO_REF:0000024
(PMID:20159982)
UniProt
RGD
PMID:20159982 GO_REF:0000024 NCBI chr 3:155,928,564...155,964,228
Ensembl chr 3:155,916,412...155,965,451
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:16585594) RGD PMID:16585594 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in ISO (PMID:17449468) RGD PMID:17449468 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005
JBrowse link
G Rwdd3 RWD domain containing 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:23469069)
UniProt
RGD
PMID:23469069 GO_REF:0000024 NCBI chr 2:209,233,622...209,254,842
Ensembl chr 2:209,233,622...209,248,853
JBrowse link
G Setd6 SET domain containing 6, protein lysine methyltransferase involved_in ISS
ISO
GO_REF:0000024
(PMID:21131967)
UniProt
RGD
PMID:21131967 GO_REF:0000024 NCBI chr19:9,343,309...9,350,477
Ensembl chr19:9,347,458...9,350,453
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:15152190) RGD PMID:15152190 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Siva1 SIVA1, apoptosis-inducing factor involved_in ISO (PMID:16491128) RGD PMID:16491128 NCBI chr 6:131,705,323...131,709,697
Ensembl chr 6:131,705,323...131,709,690
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:28362429) RGD PMID:28362429 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in ISO (PMID:18239685) RGD PMID:18239685 NCBI chr 4:81,821,991...81,877,906
Ensembl chr 4:81,821,989...81,879,100
JBrowse link
G Tceal7 transcription elongation factor A like 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:19966855)
UniProt
RGD
PMID:19966855 GO_REF:0000024 NCBI chr  X:99,228,405...99,230,551
Ensembl chr  X:99,228,458...99,230,543
JBrowse link
G Tmigd3 transmembrane and immunoglobulin domain containing 3 involved_in ISO (PMID:27886186) RGD PMID:27886186 NCBI chr 2:193,338,950...193,415,107
Ensembl chr 2:193,338,950...193,415,105
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:18223652) RGD PMID:18223652 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Traf3 Tnf receptor-associated factor 3 involved_in ISO (PMID:20185819)
(PMID:17015635)
RGD PMID:17015635 PMID:20185819 NCBI chr 6:130,199,696...130,307,168
Ensembl chr 6:130,206,484...130,305,481
JBrowse link
G Traip TRAF-interacting protein acts_upstream_of_or_within ISO (PMID:9109628) RGD PMID:9109628 NCBI chr 8:108,641,860...108,661,640
Ensembl chr 8:108,641,852...108,661,638
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:19675099) RGD PMID:19675099 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim37 tripartite motif-containing 37 involved_in ISO (PMID:11279055) RGD PMID:11279055 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558
JBrowse link
G Trim40 tripartite motif-containing 40 involved_in IMP
ISO
PMID:21474709
(PMID:21474709)
RGD PMID:21474709 PMID:21474709 RGD:8553878 NCBI chr20:1,676,114...1,685,906
Ensembl chr20:1,676,270...1,685,214
JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) RGD PMID:16643855 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20164180), (PMID:20228063)
UniProt
RGD
PMID:20164180 PMID:20228063 GO_REF:0000024 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:11279055) RGD PMID:11279055 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:18178554) RGD PMID:18178554 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
positive regulation of androgen receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud31 BUD31 homolog involved_in ISS
ISO
GO_REF:0000024
(PMID:25091737)
UniProt
RGD
PMID:25091737 GO_REF:0000024 NCBI chr12:9,462,838...9,470,387
Ensembl chr12:9,462,441...9,470,509
JBrowse link
G Rwdd1 RWD domain containing 1 involved_in ISO (PMID:18761815) RGD PMID:18761815 NCBI chr20:25,949,723...25,967,147
Ensembl chr20:25,941,966...25,967,193
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:20181722) RGD PMID:20181722 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Thap11 THAP domain containing 11 acts_upstream_of_or_within ISO MGI:3052237|MGI:3797582 (PMID:26876175) RGD PMID:26876175 NCBI chr19:33,746,977...33,748,794
Ensembl chr19:33,746,854...33,749,540
JBrowse link
positive regulation of CREB transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (PMID:12441059) RGD PMID:12441059 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Adcy8 adenylate cyclase 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:10864938), (PMID:12441059)
UniProt
RGD
PMID:10864938 PMID:12441059 GO_REF:0000024 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 acts_upstream_of_or_within ISO (PMID:27759003) RGD PMID:27759003 NCBI chr 9:17,661,258...17,696,359
Ensembl chr 9:17,660,930...17,711,704
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D IMP RGD PMID:16706838 RGD:6906921 NCBI chr16:5,227,157...5,521,163
Ensembl chr16:5,228,306...5,668,215
JBrowse link
G Camk1d calcium/calmodulin-dependent protein kinase ID involved_in ISO (PMID:16324104) RGD PMID:16324104 NCBI chr17:72,581,899...72,982,704
Ensembl chr17:72,581,979...72,980,556
JBrowse link
G Cd200 Cd200 molecule involved_in ISO (PMID:26670206) RGD PMID:26670206 NCBI chr11:55,410,166...55,437,527
Ensembl chr11:55,410,196...55,501,648
JBrowse link
G Crebbp CREB binding protein acts_upstream_of_or_within ISO (PMID:7913207) RGD PMID:7913207 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:23993098)
UniProt
RGD
PMID:23993098 GO_REF:0000024 NCBI chr16:18,988,197...19,046,914
Ensembl chr16:18,988,250...19,043,381
JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16148943)
UniProt
RGD
PMID:16148943 GO_REF:0000024 NCBI chr 2:175,709,603...175,719,768
Ensembl chr 2:175,709,644...175,719,763
JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 involved_in ISO (PMID:30611118) RGD PMID:30611118 NCBI chr 1:134,552,830...134,655,929
Ensembl chr 1:134,554,696...134,655,500
JBrowse link
G Epha5 EPH receptor A5 involved_in IMP PMID:20824214 UniProt PMID:20824214 RGD:8554330 NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317
JBrowse link
G Lpar5 lysophosphatidic acid receptor 5 acts_upstream_of_or_within ISO MGI:5431493 (PMID:22461625) RGD PMID:22461625 NCBI chr 4:157,870,493...157,883,979
Ensembl chr 4:157,881,796...157,882,950
JBrowse link
G Reln reelin involved_in ISO (PMID:21852430) RGD PMID:21852430 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
JBrowse link
G Tssk4 testis-specific serine kinase 4 involved_in ISO (PMID:15964553)
(PMID:17927909)
RGD PMID:15964553 PMID:17927909 NCBI chr15:29,140,803...29,144,128
Ensembl chr15:29,141,792...29,144,128
JBrowse link
positive regulation of DNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:19057511) RGD PMID:19057511 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Ankrd42 ankyrin repeat domain 42 acts_upstream_of_or_within ISO (PMID:20547855) RGD PMID:20547855 NCBI chr 1:146,648,080...146,691,086
Ensembl chr 1:146,648,080...146,691,108
JBrowse link
G Anxa3 annexin A3 involved_in ISO (PMID:16236264) RGD PMID:16236264 NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617
JBrowse link
G Arhgef5 Rho guanine nucleotide exchange factor 5 involved_in ISO (PMID:15601624) RGD PMID:15601624 NCBI chr 4:72,087,205...72,112,316
Ensembl chr 4:72,087,247...72,111,254
JBrowse link
G Arid5b AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within
ISO (PMID:21532585)
(PMID:17962384)
RGD PMID:17962384 PMID:21532585 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Atf2 activating transcription factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:10821277)
UniProt
RGD
PMID:10821277 GO_REF:0000024 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Bdnf brain-derived neurotrophic factor acts_upstream_of_or_within IDA PMID:23878391 MGI PMID:23878391 RGD:10047172 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bex2 brain expressed X-linked 2 involved_in ISO (PMID:16314316) RGD PMID:16314316 NCBI chr  X:99,019,847...99,021,375
Ensembl chr  X:99,019,000...99,021,503
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:19057511) RGD PMID:19057511 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within ISO (PMID:19136564) RGD PMID:19136564 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Cops5 COP9 signalosome subunit 5 involved_in ISO (PMID:20978819) RGD PMID:20978819 NCBI chr 5:9,192,233...9,210,498
Ensembl chr 5:9,192,100...9,210,731
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 acts_upstream_of_or_within IDA PMID:9234731 MGI PMID:9234731 RGD:10047266 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Cytl1 cytokine like 1 acts_upstream_of_or_within ISO (PMID:17644814) RGD PMID:17644814 NCBI chr14:73,053,876...73,058,886
Ensembl chr14:73,053,877...73,058,886
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO (PMID:18534616) RGD PMID:18534616 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in ISO (PMID:17593335) RGD PMID:17593335 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:24117217) RGD PMID:24117217 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within
involved_in
IMP
ISO
(PMID:24565863)
(PMID:25818647)
RGD PMID:24565863 PMID:25818647 PMID:19057620 RGD:2311715 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Esr1 estrogen receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:10681512), (PMID:9328340)
UniProt
RGD
PMID:9328340 PMID:10681512 GO_REF:0000024 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Esr2 estrogen receptor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:10681512)
UniProt
RGD
PMID:10681512 GO_REF:0000024 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919
JBrowse link
G Fank1 fibronectin type III and ankyrin repeat domains 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20978819)
UniProt
RGD
PMID:20978819 GO_REF:0000024 NCBI chr 1:188,577,512...188,685,501
Ensembl chr 1:188,577,575...188,685,504
JBrowse link
G Fcgr2b Fc gamma receptor 2B involved_in ISO (PMID:23921129) RGD PMID:23921129 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit IDA RGD PMID:12371906 RGD:629541 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Foxa1 forkhead box A1 involved_in ISO (PMID:16087863) RGD PMID:16087863 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in IDA
ISO
PMID:18945944
(PMID:10557084), (PMID:14739301)
PMID:14688793
RGD PMID:10557084 PMID:14739301 PMID:18945944 PMID:14688793 RGD:8554426, RGD:8553956 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643
JBrowse link
G Fzd2 frizzled class receptor 2 involved_in ISO (PMID:18929644) RGD PMID:18929644 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in ISO (PMID:14688793) RGD PMID:14688793 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO (PMID:20833366) RGD PMID:20833366 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:19071119) RGD PMID:19071119 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (PMID:19071119) RGD PMID:19071119 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:16407227) RGD PMID:16407227 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Hmga2 high mobility group AT-hook 2 IMP RGD PMID:9311991 RGD:1601604 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 acts_upstream_of_or_within ISO (PMID:19651901) RGD PMID:19651901 NCBI chr 8:84,022,493...84,059,329
Ensembl chr 8:84,022,495...84,062,976
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:24504023) RGD PMID:24504023 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Ifrd1 interferon-related developmental regulator 1 acts_upstream_of_or_within IGI PMID:15743821 MGI PMID:15743821 RGD:10047350 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
JBrowse link
G Il10 interleukin 10 involved_in ISS
ISO
GO_REF:0000024
(PMID:7749983)
UniProt
RGD
PMID:7749983 GO_REF:0000024 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:10748004) RGD PMID:10748004 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:7749983) RGD PMID:7749983 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Il5 interleukin 5 involved_in ISO (PMID:7749983) RGD PMID:7749983 NCBI chr10:37,874,342...37,877,213
Ensembl chr10:37,874,342...37,877,213
JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:7749983) RGD PMID:7749983 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Jak2 Janus kinase 2 IMP Stat3 RGD PMID:15322111 RGD:1641932 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Jup junction plakoglobin involved_in ISO (PMID:14661054) RGD PMID:14661054 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:21135090) RGD PMID:21135090 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:15035989) RGD PMID:15035989 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in ISO (PMID:14739301)
(PMID:15035989)
RGD PMID:14739301 PMID:15035989 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16127453), (PMID:18818105)
(PMID:18586328)
RGD PMID:16127453 PMID:18586328 PMID:18818105 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Myocd myocardin involved_in ISO (PMID:19098903) RGD PMID:19098903 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IDA RGD PMID:11713241 RGD:727330 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Ndp norrin cystine knot growth factor NDP involved_in ISO (PMID:15035989) RGD PMID:15035989 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934
JBrowse link
G Neurod1 neuronal differentiation 1 involved_in ISO (PMID:14752053)
(PMID:14697366)
RGD PMID:14697366 PMID:14752053 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:14697366), (PMID:16504944)
UniProt
RGD
PMID:14697366 PMID:16504944 GO_REF:0000024 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
JBrowse link
G Neurog1 neurogenin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:14697366)
UniProt
RGD
PMID:14697366 GO_REF:0000024 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Neurog2 neurogenin 2 involved_in ISO (PMID:14697366) RGD PMID:14697366 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within IDA PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:18296735) RGD PMID:18296735 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Nodal nodal growth differentiation factor involved_in ISO (PMID:21116837) RGD PMID:21116837 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:18629613) RGD PMID:18629613 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:31549850
(PMID:19136564)
RGD PMID:19136564 PMID:31549850 RGD:126781738 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Plpp3 phospholipid phosphatase 3 involved_in ISO (PMID:20123964) RGD PMID:20123964 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:19651776)
UniProt
RGD
PMID:19651776 GO_REF:0000024 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppp2r5b protein phosphatase 2, regulatory subunit B', beta acts_upstream_of_or_within IDA PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 1:203,527,268...203,535,442
Ensembl chr 1:203,527,270...203,535,416
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within ISO (PMID:23261540) RGD PMID:23261540 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
JBrowse link
G Prkd2 protein kinase D2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19192391)
UniProt
RGD
PMID:19192391 GO_REF:0000024 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:20123964) RGD PMID:20123964 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:19494289) RGD PMID:19494289 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
G Rnf220 ring finger protein 220 acts_upstream_of_or_within ISO UniProtKB:Q9NQZ6 (PMID:32094113)
MGI:2679294 (PMID:32094113)
RGD PMID:32094113 NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:11950834), (PMID:17938176) RGD PMID:11950834 PMID:17938176 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:11950834) RGD PMID:11950834 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:11909962), (PMID:16177824) RGD PMID:11909962 PMID:16177824 NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034
JBrowse link
G Srf serum response factor involved_in ISO (PMID:18296735), (PMID:19098903) RGD PMID:18296735 PMID:19098903 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:18818105) RGD PMID:18818105 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tcf3 transcription factor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:14752053)
UniProt
RGD
PMID:14752053 GO_REF:0000024 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tfdp1 transcription factor Dp-1 involved_in ISO (PMID:17062573) RGD PMID:17062573 NCBI chr16:76,162,040...76,200,871
Ensembl chr16:76,162,043...76,200,817
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:16272348 RGD:1598594 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10748004) RGD PMID:10748004 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A involved_in ISO (PMID:12296995)
(PMID:19940926)
RGD PMID:12296995 PMID:19940926 NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695
JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:19940926) RGD PMID:19940926 NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445
JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:12296995) RGD PMID:12296995 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:12296995) RGD PMID:12296995 NCBI chr13:103,569,944...103,618,747
Ensembl chr13:103,572,314...103,618,709
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:12296995) RGD PMID:12296995 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 5:60,800,568...60,824,858
Ensembl chr 5:60,800,032...60,824,858
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr20:1,700,905...1,710,249
Ensembl chr20:1,700,905...1,710,249
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr20:1,708,297...1,731,176
Ensembl chr20:1,709,788...1,731,120
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr17:43,538,282...43,550,633
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674
JBrowse link
G Trim37 tripartite motif-containing 37 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558
JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr17:41,351,857...41,365,021 JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IDA glucocorticoid receptor, independent of sumoylation activity or presence of a GME RGD PMID:11812797 RGD:2301354 NCBI chr10:14,277,749...14,294,681
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443
JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (PMID:15035989) RGD PMID:15035989 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:19056892) RGD PMID:19056892 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:10557084) RGD PMID:10557084 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:18929644) RGD PMID:18929644 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Zc4h2 zinc finger C4H2-type containing acts_upstream_of_or_within ISO UniProtKB:Q5VTB9 (PMID:32094113)
MGI:1913993 (PMID:32094113)
RGD PMID:32094113 NCBI chr  X:60,525,706...60,546,519
Ensembl chr  X:60,525,712...60,546,488
JBrowse link
G Zic2 Zic family member 2 involved_in ISO (PMID:20676059) RGD PMID:20676059 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
JBrowse link
positive regulation of NF-kappaB transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in ISO (PMID:10391939) RGD PMID:10391939 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:19158675) RGD PMID:19158675 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Amh anti-Mullerian hormone IMP RGD PMID:11356848 RGD:70295 NCBI chr 7:8,906,776...8,909,192
Ensembl chr 7:8,906,836...8,909,282
JBrowse link
G Ankrd42 ankyrin repeat domain 42 acts_upstream_of_or_within ISO (PMID:20547855) RGD PMID:20547855 NCBI chr 1:146,648,080...146,691,086
Ensembl chr 1:146,648,080...146,691,108
JBrowse link
G Ar androgen receptor involved_in ISS
ISO
GO_REF:0000024
(PMID:21310825)
UniProt
RGD
PMID:21310825 GO_REF:0000024 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19043560), (PMID:21887730)
UniProt
RGD
PMID:19043560 PMID:21887730 GO_REF:0000024 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(PMID:22265677)
(PMID:10400625), (PMID:14695475), (PMID:18287044), (PMID:24074955), (PMID:27777308)
UniProt
RGD
PMID:10400625 PMID:14695475 PMID:18287044 PMID:22265677 PMID:24074955 More... GO_REF:0000024 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in ISO (PMID:17052756) RGD PMID:17052756 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Capn3 calpain 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:18073330)
UniProt
RGD
PMID:18073330 GO_REF:0000024 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Card11 caspase recruitment domain family, member 11 involved_in ISO (PMID:12154360), (PMID:24074955)
(PMID:12154356)
RGD PMID:12154356 PMID:12154360 PMID:24074955 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
JBrowse link
G Card14 caspase recruitment domain family, member 14 involved_in ISO (PMID:21302310)
(PMID:27113748)
RGD PMID:21302310 PMID:27113748 NCBI chr10:104,572,059...104,601,606
Ensembl chr10:104,566,424...104,601,905
JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in
NOT|acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:22265677), (PMID:29080677)
MGI:3698412 (PMID:17187069)
(PMID:25057046), (PMID:25702837), (PMID:26488816), (PMID:29080677), (PMID:31296852), (PMID:33558980)
UniProt
RGD
PMID:17187069 PMID:22265677 PMID:25057046 PMID:25702837 PMID:26488816 More... GO_REF:0000024 NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:15616592) RGD PMID:15616592 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cat catalase acts_upstream_of_or_within ISO (PMID:15020231) RGD PMID:15020231 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
JBrowse link
G Cd40lg CD40 ligand involved_in ISS
ISO
GO_REF:0000024
(PMID:15067037)
UniProt
RGD
PMID:15067037 GO_REF:0000024 NCBI chr  X:135,127,052...135,138,768
Ensembl chr  X:135,126,969...135,138,306
JBrowse link
G Cd84 CD84 molecule involved_in ISO (PMID:20628063) RGD PMID:20628063 NCBI chr13:84,327,580...84,367,153
Ensembl chr13:84,327,553...84,362,076
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (PMID:21364645) RGD PMID:21364645 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19854831)
UniProt
RGD
PMID:19854831 GO_REF:0000024 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:19136564) RGD PMID:19136564 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Clock clock circadian regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:22895791)
UniProt
RGD
PMID:22895791 GO_REF:0000024 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Clu clusterin involved_in ISS
ISO
GO_REF:0000024
(PMID:20068069)
UniProt
RGD
PMID:20068069 GO_REF:0000024 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:19211730 RGD:5130956 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Crnn cornulin involved_in ISO (PMID:30009832) RGD PMID:30009832 NCBI chr 2:178,733,329...178,736,404
Ensembl chr 2:178,731,796...178,736,216
JBrowse link
G Cth cystathionine gamma-lyase involved_in ISS
ISO
GO_REF:0000024
(PMID:22244329)
UniProt
RGD
PMID:22244329 GO_REF:0000024 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Dhx33 DEAH-box helicase 33 involved_in ISO (PMID:24037184) RGD PMID:24037184 NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:15355351) RGD PMID:15355351 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:15121867)
UniProt
RGD
PMID:15121867 GO_REF:0000024 NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (PMID:15218148) RGD PMID:15218148 NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Fer FER tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(PMID:21518868)
UniProt
RGD
PMID:21518868 GO_REF:0000024 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:18505784) RGD PMID:18505784 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO UniProtKB:Q9HC29 (PMID:24790089) RGD PMID:24790089 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO UniProtKB:Q9HC29 (PMID:24790089) RGD PMID:24790089 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Icam1 intercellular adhesion molecule 1 IMP RGD PMID:9062344 RGD:1600239 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta acts_upstream_of_or_within IMP
ISO
(PMID:15790681) RGD PMID:15790681 PMID:15939736 RGD:7495757 NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISS
ISO
GO_REF:0000024
(PMID:15620648), (PMID:18287044)
UniProt
RGD
PMID:15620648 PMID:18287044 GO_REF:0000024 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:152,216,596...152,239,499
JBrowse link
G Il18 interleukin 18 involved_in ISS
ISO
GO_REF:0000024
(PMID:25500532)
UniProt
RGD
PMID:25500532 GO_REF:0000024 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il18r1 interleukin 18 receptor 1 involved_in ISO (PMID:25500532) RGD PMID:25500532 NCBI chr 9:42,727,416...42,760,971
Ensembl chr 9:42,727,869...42,760,715
JBrowse link
G Il18rap interleukin 18 receptor accessory protein involved_in ISO (PMID:25500532) RGD PMID:25500532 NCBI chr 9:42,768,112...42,800,964
Ensembl chr 9:42,768,220...42,800,959
JBrowse link
G Il1b interleukin 1 beta acts_upstream_of
involved_in
ISO (PMID:25327529)
(PMID:10383454), (PMID:12958148)
RGD PMID:10383454 PMID:12958148 PMID:25327529 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:18003919) RGD PMID:18003919 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:19727662) RGD PMID:19727662 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(PMID:12054681)
(PMID:16831874)
RGD PMID:10383454 PMID:12054681 PMID:16831874 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(PMID:15082713)
RGD PMID:10383454 PMID:15082713 NCBI chr 4:146,786,004...146,842,615
Ensembl chr 4:146,786,100...146,842,602
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(PMID:12054681)
RGD PMID:10383454 PMID:12054681 NCBI chr 7:55,653,949...55,714,371
Ensembl chr 7:55,653,962...55,713,121
JBrowse link
G Itgb2 integrin subunit beta 2 IMP RGD PMID:9062344 RGD:1600239 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Kras KRAS proto-oncogene, GTPase IMP RGD PMID:14576830 RGD:1600488 NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 acts_upstream_of_or_within ISO UniProtKB:Q04206 (PMID:21343296) RGD PMID:21343296 NCBI chr 2:194,900,038...194,905,394
Ensembl chr 2:194,900,038...194,905,395
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25754930) RGD PMID:25754930 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Lrrfip1 LRR binding FLII interacting protein 1 acts_upstream_of_or_within ISO MGI:96824 (PMID:19265123) RGD PMID:19265123 NCBI chr 9:91,592,032...91,720,250
Ensembl chr 9:91,643,197...91,720,250
JBrowse link
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO MGI:108005|MGI:96824 (PMID:19265123) RGD PMID:19265123 NCBI chr 8:111,091,453...111,193,947
Ensembl chr 8:111,091,503...111,193,255
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) RGD PMID:20345905 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Malt1 MALT1 paracaspase involved_in
acts_upstream_of_or_within
ISO (PMID:18223652)
MGI:3639305 (PMID:14614861)
RGD PMID:14614861 PMID:18223652 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
JBrowse link
G Map3k13 mitogen-activated protein kinase kinase kinase 13 involved_in ISO (PMID:12492477) RGD PMID:12492477 NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:18586328) RGD PMID:18586328 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mtdh metadherin involved_in ISS
ISO
GO_REF:0000024
(PMID:16452207), (PMID:18316612)
UniProt
RGD
PMID:16452207 PMID:18316612 GO_REF:0000024 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
JBrowse link
G Mtpn myotrophin involved_in IDA PMID:18693253 UniProt PMID:18693253 RGD:8553542 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within
ISO (PMID:22155231)
MGI:1918518|MGI:2147032|MGI:2385681 (PMID:12855817), (PMID:19265123)
RGD PMID:12855817 PMID:19265123 PMID:22155231 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in ISO (PMID:12646168) RGD PMID:12646168 NCBI chr 6:20,991,785...21,018,254
Ensembl chr 6:20,995,266...21,018,248
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:19158675) RGD PMID:19158675 NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO (PMID:17054981), (PMID:19043560) RGD PMID:17054981 PMID:19043560 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
ISO (PMID:11385577), (PMID:16203728), (PMID:21887730), (PMID:24790089)
MGI:2680581 (PMID:15220916)
(PMID:12527755)
RGD PMID:11385577 PMID:12527755 PMID:15220916 PMID:16203728 PMID:21887730 More... NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:15087454) RGD PMID:15087454 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15488758)
UniProt
RGD
PMID:15488758 GO_REF:0000024 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Nts neurotensin acts_upstream_of ISO (PMID:21806946) RGD PMID:21806946 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:15528384) RGD PMID:15528384 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:19136564) RGD PMID:19136564 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISS
ISO
GO_REF:0000024
(PMID:15130913), (PMID:23180369)
UniProt
RGD
PMID:15130913 PMID:23180369 GO_REF:0000024 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601
JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:21,006,522...21,007,284
Ensembl chr14:21,006,538...21,007,310
JBrowse link
G Prdx3 peroxiredoxin 3 involved_in ISO (PMID:12492477) RGD PMID:12492477 NCBI chr 1:260,001,642...260,014,064
Ensembl chr 1:260,001,637...260,014,111
JBrowse link
G Prkch protein kinase C, eta involved_in ISS
ISO
GO_REF:0000024
(PMID:21820409)
UniProt
RGD
PMID:21820409 GO_REF:0000024 NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
JBrowse link
G Prkci protein kinase C, iota involved_in ISS
ISO
GO_REF:0000024
(PMID:10467349)
UniProt
RGD
PMID:10467349 GO_REF:0000024 NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352
JBrowse link
G Prkcq protein kinase C, theta involved_in ISS
ISO
GO_REF:0000024
(PMID:12782715)
(PMID:16356855)
UniProt
RGD
PMID:12782715 PMID:16356855 GO_REF:0000024 NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
JBrowse link
G Prkcz protein kinase C, zeta involved_in IMP PMID:8557035 UniProt PMID:8557035 RGD:8554313 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Prkd1 protein kinase D1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12505989)
UniProt
RGD
PMID:12505989 GO_REF:0000024 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Prkd2 protein kinase D2 involved_in ISS
ISO
GO_REF:0000024
(PMID:15604256), (PMID:16928771), (PMID:28428613)
UniProt
RGD
PMID:15604256 PMID:16928771 PMID:28428613 GO_REF:0000024 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376
JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:16845397)
BHF-UCL
RGD
PMID:16845397 GO_REF:0000024 NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554
JBrowse link
G Ptma prothymosin alpha involved_in IGI PMID:11897665 CAFA PMID:11897665 RGD:10059606 NCBI chr 9:87,176,251...87,180,333
Ensembl chr 9:87,176,230...87,180,333
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:12646168) RGD PMID:12646168 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rab7b Rab7b, member RAS oncogene family involved_in ISO (PMID:20953574) RGD PMID:20953574 NCBI chr13:43,121,168...43,147,581
Ensembl chr13:43,121,226...43,147,581
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in ISO (PMID:19136968) RGD PMID:19136968 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in
ISO (PMID:15790681)
(PMID:22244329)
UniProtKB:P23396 (PMID:18045535)
RGD PMID:15790681 PMID:18045535 PMID:22244329 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rhebl1 RHEB like 1 involved_in ISO (PMID:16328882) RGD PMID:16328882 NCBI chr 7:130,026,255...130,031,127
Ensembl chr 7:130,026,341...130,030,248
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:10521396), (PMID:21931591), (PMID:8612133)
(PMID:20125124), (PMID:31519886), (PMID:31519887)
RGD PMID:8612133 PMID:10521396 PMID:20125124 PMID:21931591 PMID:31519886 More... NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:11821383), (PMID:21887730), (PMID:21931591), (PMID:29452636), (PMID:30026309), (PMID:30279485), (PMID:30478312)
(PMID:21887730)
MGI:2446070 (PMID:14638696)
RGD PMID:11821383 PMID:14638696 PMID:21887730 PMID:21931591 PMID:29452636 More... NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 involved_in ISO (PMID:21931591) RGD PMID:21931591 NCBI chr15:29,283,153...29,292,107
Ensembl chr15:29,283,145...29,292,121
JBrowse link
G Ripk4 receptor-interacting serine-threonine kinase 4 involved_in ISO (PMID:21931591) RGD PMID:21931591 NCBI chr11:37,122,555...37,144,799
Ensembl chr11:37,122,565...37,144,799
JBrowse link
G Rnf25 ring finger protein 25 involved_in ISO (PMID:12748188) RGD PMID:12748188 NCBI chr 9:76,170,037...76,176,924
Ensembl chr 9:76,170,037...76,176,849
JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:19136968) RGD PMID:19136968 NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 involved_in ISO (PMID:27162350) RGD PMID:27162350 NCBI chr 5:114,744,311...115,088,155
Ensembl chr 5:114,744,304...115,088,155
JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO UniProtKB:Q04206 (PMID:18045535) RGD PMID:18045535 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680
JBrowse link
G Rps6ka5 ribosomal protein S6 kinase A5 involved_in ISO (PMID:12628924), (PMID:18511904) RGD PMID:12628924 PMID:18511904 NCBI chr 6:119,828,823...120,006,190
Ensembl chr 6:119,828,846...120,006,224
JBrowse link
G Rtkn2 rhotekin 2 involved_in ISO (PMID:26124677) RGD PMID:26124677 NCBI chr20:20,536,628...20,609,951
Ensembl chr20:20,525,256...20,609,951
JBrowse link
G Slco3a1 solute carrier organic anion transporter family, member 3a1 involved_in ISO (PMID:24945726) RGD PMID:24945726 NCBI chr 1:128,106,232...128,388,043
Ensembl chr 1:128,106,228...128,387,925
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in IMP
ISO
ISS
PMID:28284343
(PMID:20577214)
GO_REF:0000024
RGD
UniProt
PMID:20577214 PMID:28284343 GO_REF:0000024, RGD:14397556 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
ISO
GO_REF:0000024
(PMID:20622870)
UniProt
RGD
PMID:20622870 GO_REF:0000024 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064
JBrowse link
G Tfrc transferrin receptor involved_in ISO (PMID:23016877) RGD PMID:23016877 NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IDA RGD PMID:15781474 RGD:1579751 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:17823118) RGD PMID:17823118 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 acts_upstream_of_or_within ISO MGI:108005|MGI:3029019 (PMID:12855817) RGD PMID:12855817 NCBI chr 9:1,102,559...1,111,023
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:19509286)
(PMID:12447442)
RGD PMID:12447442 PMID:19509286 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:21618349)
(PMID:12594207)
RGD PMID:12594207 PMID:21618349 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr3 toll-like receptor 3 involved_in ISO MGI:3690535 (PMID:12855817) RGD PMID:12855817 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of
acts_upstream_of_or_within
IMP
ISO
(PMID:29038465)
(PMID:30233718)
(PMID:12594207)
RGD PMID:12594207 PMID:29038465 PMID:30233718 PMID:16651628 RGD:1598593 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:15790681)
(PMID:10383454), (PMID:16280327), (PMID:16611992), (PMID:24790089), (PMID:25193116)
UniProt
RGD
PMID:10383454 PMID:15790681 PMID:16280327 PMID:16611992 PMID:24790089 More... GO_REF:0000024 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A involved_in ISO (PMID:12296995), (PMID:9367155) RGD PMID:9367155 PMID:12296995 NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695
JBrowse link
G Tnfrsf8 TNF receptor superfamily member 8 IMP RGD PMID:8982082 RGD:730027 NCBI chr 5:157,123,183...157,168,421
Ensembl chr 5:157,123,185...157,168,421
JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:9367155) RGD PMID:9367155 NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445
JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (PMID:14521928) RGD PMID:14521928 NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
JBrowse link
G Traf1 TNF receptor-associated factor 1 involved_in ISO (PMID:10692572) RGD PMID:10692572 NCBI chr 3:18,222,024...18,242,163
Ensembl chr 3:18,222,054...18,241,807
JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in IMP
ISO
(PMID:15121867)
(PMID:11279055), (PMID:12296995), (PMID:15121867)
RGD PMID:11279055 PMID:12296995 PMID:15121867 PMID:10713108 RGD:2298798 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:12296995), (PMID:15121867)
(PMID:15121867)
RGD PMID:12296995 PMID:15121867 NCBI chr13:103,569,944...103,618,747
Ensembl chr13:103,572,314...103,618,709
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:20345905)
(PMID:11279055), (PMID:11751921), (PMID:12296995), (PMID:16378096)
UniProt
RGD
PMID:11279055 PMID:11751921 PMID:12296995 PMID:16378096 PMID:20345905 GO_REF:0000024 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 acts_upstream_of_or_within ISO (PMID:15951441), (PMID:24011459) RGD PMID:15951441 PMID:24011459 NCBI chr 7:104,521,593...104,998,352
Ensembl chr 7:104,521,593...104,998,352
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 5:60,800,568...60,824,858
Ensembl chr 5:60,800,032...60,824,858
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr20:1,700,905...1,710,249
Ensembl chr20:1,700,905...1,710,249
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:23077300)
(PMID:16816390)
RGD PMID:16816390 PMID:23077300 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Trim37 tripartite motif-containing 37 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558
JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr17:41,351,857...41,365,021 JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573), (PMID:23077300) RGD PMID:21512573 PMID:23077300 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim52 tripartite motif-containing 52 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr15:82,886,237...82,924,611
Ensembl chr15:82,886,237...82,909,759
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:23077300) RGD PMID:23077300 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:14695475), (PMID:16129784) RGD PMID:14695475 PMID:16129784 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355
JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18287027) RGD PMID:18287027 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISS
ISO
GO_REF:0000024
(PMID:15917220)
UniProt
RGD
PMID:15917220 GO_REF:0000024 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20217
    biological regulation 13615
      regulation of molecular function 1762
        regulation of DNA-binding transcription factor activity 396
          negative regulation of DNA-binding transcription factor activity + 168
          negative regulation of hh target transcription factor activity 1
          positive regulation of DNA-binding transcription factor activity + 229
Path 2
Term Annotations click to browse term
  biological_process 20217
    biological regulation 13615
      regulation of biological process 13195
        regulation of cellular process 12831
          regulation of metabolic process 6778
            regulation of biosynthetic process 5549
              regulation of cellular biosynthetic process 5448
                regulation of macromolecule biosynthetic process 5348
                  regulation of RNA biosynthetic process 3415
                    regulation of DNA-templated transcription 3407
                      regulation of DNA-binding transcription factor activity 396
                        negative regulation of DNA-binding transcription factor activity + 168
                        negative regulation of hh target transcription factor activity 1
                        positive regulation of DNA-binding transcription factor activity + 229
paths to the root