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ONTOLOGY REPORT - ANNOTATIONS

Term:actin filament bundle assembly
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Accession:GO:0051017 term browser browse the term
Definition:The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.
Synonyms:related_synonym: actin bundling activity;   actin cable assembly;   actin cable formation
 alt_id: GO:0045011


show annotations for term's descendants           Sort by:
actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:11752434) MGI PMID:11752434 NCBI chr 1:179,099,330...179,229,677
Ensembl chr 1:179,099,330...179,229,684 		JBrowse link
G ACTN1 actinin alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:68,874,128...68,979,302
Ensembl chr14:68,874,128...68,979,440 		JBrowse link
G ACTN4 actinin alpha 4 involved_in ISO (MGI:3577135|PMID:15841212) UniProt PMID:15841212 MGI:3577135 NCBI chr19:38,647,649...38,731,589
Ensembl chr19:38,647,649...38,731,589 		JBrowse link
G ADD1 adducin 1 involved_in IDA (PMID:3693401) BHF-UCL PMID:3693401 NCBI chr 4:2,843,844...2,930,062
Ensembl chr 4:2,843,844...2,930,076 		JBrowse link
G ADD2 adducin 2 involved_in IDA (PMID:3693401) BHF-UCL PMID:3693401 NCBI chr 2:70,656,784...70,768,200
Ensembl chr 2:70,607,618...70,768,225 		JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA		 (PMID:14756805)
(PMID:18699778)		 Ensembl
MGI
TreeGrafter
GO_Central
UniProt		 PMID:14756805 PMID:18699778 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021 		JBrowse link
G AIF1L allograft inflammatory factor 1 like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:131,096,531...131,123,144
Ensembl chr 9:131,096,476...131,123,152 		JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:19208628) Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:19208628 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:81,035,151...81,117,434
Ensembl chr17:81,035,122...81,117,434 		JBrowse link
G BAIAP2L1 BAR/IMD domain containing adaptor protein 2 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:98,291,650...98,401,090
Ensembl chr 7:98,291,650...98,401,090 		JBrowse link
G BAIAP2L2 BAR/IMD domain containing adaptor protein 2 like 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr22:38,084,900...38,110,967
Ensembl chr22:38,084,652...38,111,015 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19116644) Ensembl
MGI		 PMID:19116644 GO_REF:0000107 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945 		JBrowse link
G CALD1 caldesmon 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter		 PMID:3384851 GO_REF:0000033 GO_REF:0000118 RGD:2303065 NCBI chr 7:134,745,467...134,970,729
Ensembl chr 7:134,744,252...134,970,729 		JBrowse link
G CORO1B coronin 1B involved_in IDA (PMID:17456547) UniProt PMID:17456547 NCBI chr11:67,435,510...67,443,809
Ensembl chr11:67,435,510...67,443,821 		JBrowse link
G DBNL drebrin like NOT|acts_upstream_of_or_within ISO (PMID:10637315) MGI PMID:10637315 NCBI chr 7:44,044,702...44,069,456
Ensembl chr 7:44,044,640...44,069,456 		JBrowse link
G DIAPH3 diaphanous related formin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18264091)
(PMID:24239357)		 Ensembl
MGI		 PMID:18264091 PMID:24239357 GO_REF:0000107 NCBI chr13:59,665,583...60,163,928
Ensembl chr13:59,665,583...60,163,928 		JBrowse link
G DMD dystrophin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:31,119,222...33,339,388
Ensembl chr  X:31,097,677...33,339,609 		JBrowse link
G DMTN dematin actin binding protein involved_in TAS
IBA
IDA		 (PMID:7615546)
(PMID:19241372), (PMID:23355471)		 UniProt
GO_Central		 PMID:7615546 PMID:19241372 PMID:23355471 GO_REF:0000033 NCBI chr 8:22,048,931...22,082,525
Ensembl chr 8:22,048,995...22,082,527 		JBrowse link
G DPYSL3 dihydropyrimidinase like 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:147,390,808...147,510,068
Ensembl chr 5:147,390,808...147,510,068 		JBrowse link
G EPS8 EGFR pathway substrate 8, signaling adaptor involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19208628) UniProt
MGI
Ensembl		 PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,620,134...15,789,388
Ensembl chr12:15,620,134...15,882,329 		JBrowse link
G ESPN espin involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:10588661) GO_Central
MGI		 PMID:10588661 GO_REF:0000033 NCBI chr 1:6,424,776...6,461,370
Ensembl chr 1:6,424,776...6,461,367 		JBrowse link
G ESPNL espin like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:238,100,340...238,133,287
Ensembl chr 2:238,100,340...238,133,287 		JBrowse link
G EZR ezrin involved_in IDA (PMID:10793131) UniProt PMID:10793131 NCBI chr 6:158,765,748...158,819,368
Ensembl chr 6:158,765,741...158,819,368 		JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISS
IBA
IEA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:58,564,117...58,627,610
Ensembl chr 3:58,564,117...58,627,610 		JBrowse link
G FMN2 formin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23439682) Ensembl
MGI		 PMID:23439682 GO_REF:0000107 NCBI chr 1:240,091,883...240,475,187
Ensembl chr 1:240,014,348...240,475,187 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
IDA		 (PMID:8647875)
(PMID:17671164), (PMID:7738015)
(PMID:20393565)		 PINC
MGI
GO_Central
TreeGrafter
UniProt
Ensembl		 PMID:7738015 PMID:8647875 PMID:17671164 PMID:20393565 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:5,592,816...5,606,655
Ensembl chr 7:5,592,816...5,606,655 		JBrowse link
G FSCN2 fascin actin-bundling protein 2, retinal involved_in TAS
IBA		 (PMID:10783262) PINC
GO_Central		 PMID:10783262 GO_REF:0000033 NCBI chr17:81,515,062...81,537,130
Ensembl chr17:81,528,377...81,537,130 		JBrowse link
G FSCN3 fascin actin-bundling protein 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:127,593,736...127,602,144
Ensembl chr 7:127,591,409...127,602,144 		JBrowse link
G GAS7 growth arrest specific 7 acts_upstream_of_or_within ISO (PMID:11795944) MGI PMID:11795944 NCBI chr17:9,910,606...10,198,606
Ensembl chr17:9,910,606...10,198,606 		JBrowse link
G LCP1 lymphocyte cytosolic protein 1 acts_upstream_of_or_within
involved_in		 ISS
IEA
IBA
IMP		 (PMID:16636079) ARUK-UCL
TreeGrafter
GO_Central
InterPro
UniProt
Ensembl		 PMID:16636079 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:46,125,923...46,182,177
Ensembl chr13:46,125,920...46,211,871 		JBrowse link
G LIMA1 LIM domain and actin binding 1 involved_in IDA
IEA
IBA		 (PMID:12566430) UniProt
TreeGrafter
GO_Central		 PMID:12566430 GO_REF:0000033 GO_REF:0000118 NCBI chr12:50,175,788...50,283,520
Ensembl chr12:50,175,788...50,283,520 		JBrowse link
G LIMD2 LIM domain containing 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:63,695,888...63,701,155
Ensembl chr17:63,695,888...63,701,172 		JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:113,857,345...113,863,475
Ensembl chr 6:113,857,345...113,863,475 		JBrowse link
G MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:109,444,062...109,465,968
Ensembl chr 6:109,444,062...109,465,968 		JBrowse link
G MYH10 myosin heavy chain 10 ISO RGD PMID:22992457 RGD:12798526 NCBI chr17:8,474,212...8,630,725
Ensembl chr17:8,474,207...8,631,376 		JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:22992457 RGD:12798526 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010 		JBrowse link
G MYO1B myosin IB involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:191,245,404...191,425,386
Ensembl chr 2:191,245,185...191,425,389 		JBrowse link
G NEDD9 neural precursor cell expressed, developmentally down-regulated 9 involved_in NAS (PMID:11827972) UniProt PMID:11827972 NCBI chr 6:11,183,298...11,382,348
Ensembl chr 6:11,183,298...11,382,348 		JBrowse link
G PAWR pro-apoptotic WT1 regulator involved_in ISS UniProt GO_REF:0000024 NCBI chr12:79,584,879...79,690,964
Ensembl chr12:79,574,979...79,690,964 		JBrowse link
G PLS1 plastin 1 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:142,596,393...142,713,664
Ensembl chr 3:142,596,393...142,713,664 		JBrowse link
G PLS3 plastin 3 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:115,561,174...115,650,861
Ensembl chr  X:115,561,174...115,650,861 		JBrowse link
G RHOD ras homolog family member D involved_in IMP (PMID:23087206) UniProt PMID:23087206 NCBI chr11:67,056,847...67,072,017
Ensembl chr11:67,056,847...67,072,017 		JBrowse link
G SHROOM1 shroom family member 1 involved_in ISS
IBA
IEA		 (PMID:16684770) HGNC
GO_Central
Ensembl		 PMID:16684770 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:132,822,141...132,830,647
Ensembl chr 5:132,822,141...132,830,659 		JBrowse link
G SHROOM2 shroom family member 2 NOT|involved_in ISS (PMID:16684770) HGNC PMID:16684770 NCBI chr  X:9,786,429...9,949,443
Ensembl chr  X:9,786,429...9,949,443 		JBrowse link
G SPTAN1 spectrin alpha, non-erythrocytic 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:128,552,587...128,633,662
Ensembl chr 9:128,552,558...128,633,662 		JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:9,664,077...9,752,993
Ensembl chr11:9,664,077...9,752,993 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12485990) BHF-UCL
MGI		 PMID:12485990 GO_REF:0000024 NCBI chr11:17,493,900...17,544,416
Ensembl chr11:17,493,895...17,544,416 		JBrowse link
actin rod assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSP90B1 heat shock protein 90 beta family member 1 acts_upstream_of_or_within IDA (PMID:19000834) MGI PMID:19000834 NCBI chr12:103,930,410...103,947,926
Ensembl chr12:103,930,107...103,953,931 		JBrowse link
G PDXP pyridoxal phosphatase acts_upstream_of_or_within IMP
IDA		 (PMID:19000834) MGI PMID:19000834 NCBI chr22:37,658,723...37,666,932
Ensembl chr22:37,658,723...37,666,932 		JBrowse link
contractile actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569937) Ensembl
MGI		 PMID:15569937 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
formin-nucleated actin cable assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN2 formin 2 involved_in ISS
IDA
IEA		 (PMID:26287480) UniProt
Ensembl		 PMID:26287480 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:240,091,883...240,475,187
Ensembl chr 1:240,014,348...240,475,187 		JBrowse link
G SPIRE1 spire type actin nucleation factor 1 involved_in ISS
IMP		 (PMID:26287480) UniProt PMID:26287480 GO_REF:0000024 NCBI chr18:12,446,512...12,662,091
Ensembl chr18:12,446,512...12,658,107 		JBrowse link
G SPIRE2 spire type actin nucleation factor 2 involved_in IMP
IEA
ISS		 (PMID:26287480) UniProt
Ensembl		 PMID:26287480 GO_REF:0000024 GO_REF:0000107 NCBI chr16:89,828,475...89,871,319
Ensembl chr16:89,818,179...89,871,319 		JBrowse link
microvillar actin bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESPN espin involved_in IMP (PMID:29572253) UniProt PMID:29572253 NCBI chr 1:6,424,776...6,461,370
Ensembl chr 1:6,424,776...6,461,367 		JBrowse link
negative regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFL1 cofilin 1 ISO RGD PMID:24093776 RGD:11570550 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026 		JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:8769857 RGD:2317774 NCBI chr 5:177,456,610...177,473,634
Ensembl chr 5:177,456,608...177,474,401 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO prevents phenylephrine-induced actin organization RGD PMID:9155015 RGD:2293527 NCBI chr 5:56,815,549...56,896,152
Ensembl chr 5:56,815,549...56,896,152 		JBrowse link
G PFN1 profilin 1 involved_in IMP (PMID:23153535) UniProt PMID:23153535 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IDA (PMID:17512523) BHF-UCL PMID:17512523 NCBI chr 6:161,347,417...162,727,766
Ensembl chr 6:161,347,417...162,727,775 		JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:19208628) Ensembl
MGI
BHF-UCL		 PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr19:50,659,255...50,719,802
Ensembl chr19:50,659,255...50,719,802 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19208628) BHF-UCL
MGI
Ensembl		 PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,415...50,733,212 		JBrowse link
negative regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 involved_in IMP (PMID:11804590) UniProt PMID:11804590 NCBI chr11:72,685,069...72,752,408
Ensembl chr11:72,685,069...72,793,599 		JBrowse link
G ARHGAP28 Rho GTPase activating protein 28 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25211221) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:25211221 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:6,729,716...6,915,716
Ensembl chr18:6,729,716...6,915,716 		JBrowse link
G ARHGAP6 Rho GTPase activating protein 6 involved_in IMP (PMID:10699171) BHF-UCL PMID:10699171 NCBI chr  X:11,137,544...11,665,920
Ensembl chr  X:11,117,651...11,665,920 		JBrowse link
G ARHGEF18 Rho/Rac guanine nucleotide exchange factor 18 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr19:7,348,937...7,479,989
Ensembl chr19:7,348,937...7,472,485 		JBrowse link
G CGNL1 cingulin like 1 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr15:57,376,505...57,550,717
Ensembl chr15:57,375,967...57,550,717 		JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:33,496,245...33,718,254
Ensembl chr 3:33,496,245...33,718,356 		JBrowse link
G CORO2B coronin 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29162887) Ensembl
MGI		 PMID:29162887 GO_REF:0000107 NCBI chr15:68,518,373...68,727,806
Ensembl chr15:68,578,993...68,727,806 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein involved_in IDA (PMID:17932950) UniProt PMID:17932950 NCBI chr 8:13,083,361...13,604,620
Ensembl chr 8:13,083,361...13,604,610 		JBrowse link
G F11R F11 receptor involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 1:160,995,211...161,021,152
Ensembl chr 1:160,995,211...161,021,175 		JBrowse link
G FRMD7 FERM domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23967341) Ensembl
MGI		 PMID:23967341 GO_REF:0000107 NCBI chr  X:132,076,990...132,128,020
Ensembl chr  X:132,076,990...132,128,020 		JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IDA (PMID:12556481) UniProt PMID:12556481 NCBI chr17:1,494,577...1,516,612
Ensembl chr17:1,494,577...1,516,742 		JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IDA (PMID:25198505) CAFA PMID:25198505 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377 		JBrowse link
G MIR138-1 microRNA 138-1 involved_in IDA (PMID:20232393) BHF-UCL PMID:20232393 NCBI chr 3:44,114,212...44,114,310
Ensembl chr 3:44,114,212...44,114,310 		JBrowse link
G MIR138-2 microRNA 138-2 involved_in IDA (PMID:20232393) BHF-UCL PMID:20232393 NCBI chr16:56,858,518...56,858,601
Ensembl chr16:56,858,518...56,858,601 		JBrowse link
G MIR149 microRNA 149 involved_in IDA (PMID:26498692) ARUK-UCL PMID:26498692 NCBI chr 2:240,456,001...240,456,089
Ensembl chr 2:240,456,001...240,456,089 		JBrowse link
G MIR20A microRNA 20a involved_in IDA (PMID:22696064) BHF-UCL PMID:22696064 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135 		JBrowse link
G MIR21 microRNA 21 involved_in IDA (PMID:21347332) BHF-UCL PMID:21347332 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G MYOC myocilin involved_in IDA (PMID:17984096) UniProt PMID:17984096 NCBI chr 1:171,635,417...171,652,688
Ensembl chr 1:171,635,417...171,652,688 		JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 3:196,739,857...196,832,647
Ensembl chr 3:196,739,857...196,832,647 		JBrowse link
G PFN1 profilin 1 involved_in IMP (PMID:23153535) UniProt PMID:23153535 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:111,732,496...111,976,517
Ensembl chr 3:111,732,497...111,976,517 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:68,215,756...68,301,821
Ensembl chr 5:68,215,740...68,301,821 		JBrowse link
G PPFIA1 PTPRF interacting protein alpha 1 acts_upstream_of_or_within
involved_in		 IMP
IEA		 (PMID:22266902) MGI
Ensembl		 PMID:22266902 GO_REF:0000107 NCBI chr11:70,270,690...70,384,396
Ensembl chr11:70,270,690...70,385,312 		JBrowse link
G PPP1R9A protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:12052877 RGD:1299363 NCBI chr 7:94,907,236...95,296,415
Ensembl chr 7:94,907,202...95,296,415 		JBrowse link
G RHPN1 rhophilin Rho GTPase binding protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:25071083) GO_Central
MGI		 PMID:25071083 GO_REF:0000033 NCBI chr 8:143,364,255...143,384,221
Ensembl chr 8:143,368,876...143,384,221 		JBrowse link
G RHPN2 rhophilin Rho GTPase binding protein 2 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:25071083) MGI
GO_Central		 PMID:25071083 GO_REF:0000033 NCBI chr19:32,978,592...33,064,888
Ensembl chr19:32,978,592...33,064,888 		JBrowse link
G RHPN2P1 rhophilin Rho GTPase binding protein 2 pseudogene 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:20,228,419...20,276,864 JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11094076 GO_REF:0000107 RGD:1581790 NCBI chr 1:101,236,899...101,242,313
Ensembl chr 1:101,236,865...101,243,713 		JBrowse link
G STMN1 stathmin 1 involved_in IMP (PMID:25198505) CAFA PMID:25198505 NCBI chr 1:25,884,179...25,906,880
Ensembl chr 1:25,884,181...25,906,991 		JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252 		JBrowse link
G TJP1 tight junction protein 1 involved_in ISS
IEA		 ARUK-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:29,699,367...29,969,049
Ensembl chr15:29,699,367...29,968,915 		JBrowse link
G TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 acts_upstream_of_or_within IDA (PMID:24632071) MGI PMID:24632071 NCBI chr 2:191,949,046...192,194,933
Ensembl chr 2:191,949,043...192,194,933 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in IMP (PMID:8625410) CAFA PMID:8625410 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431 		JBrowse link
G WASF2 WASP family member 2 involved_in IMP (PMID:21107423) UniProt PMID:21107423 NCBI chr 1:27,404,230...27,490,167
Ensembl chr 1:27,404,230...27,490,167 		JBrowse link
parallel actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIF1 allograft inflammatory factor 1 involved_in IEA
ISS		 Ensembl
ARUK-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021 		JBrowse link
G ESPN espin acts_upstream_of_or_within ISO (PMID:10588661) MGI PMID:10588661 NCBI chr 1:6,424,776...6,461,370
Ensembl chr 1:6,424,776...6,461,367 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in IDA (PMID:21685497) UniProt PMID:21685497 NCBI chr 7:5,592,816...5,606,655
Ensembl chr 7:5,592,816...5,606,655 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12485990) BHF-UCL
MGI		 PMID:12485990 GO_REF:0000024 NCBI chr11:17,493,900...17,544,416
Ensembl chr11:17,493,895...17,544,416 		JBrowse link
positive regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in IGI (PMID:10415068) ARUK-UCL PMID:10415068 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044 		JBrowse link
G FLNA filamin A involved_in ISO
IEA		 RGD
Ensembl		 PMID:22872576 GO_REF:0000107 RGD:7207404 NCBI chr  X:154,348,531...154,374,634
Ensembl chr  X:154,348,524...154,374,634 		JBrowse link
G ID1 inhibitor of DNA binding 1 ISO RGD PMID:16628634 RGD:9686088 NCBI chr20:31,605,289...31,606,510
Ensembl chr20:31,605,283...31,606,515 		JBrowse link
G LIMK1 LIM domain kinase 1 involved_in IDA (PMID:17512523) BHF-UCL PMID:17512523 NCBI chr 7:74,083,804...74,122,525
Ensembl chr 7:74,082,933...74,122,525 		JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:21406566) GO_Central
MGI
TreeGrafter		 PMID:21406566 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:124,550,784...124,728,473
Ensembl chr 8:124,550,784...124,728,473 		JBrowse link
G PDE4DIP phosphodiesterase 4D interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:148,808,434...149,033,016
Ensembl chr 1:148,808,140...149,048,286 		JBrowse link
G PFN1 profilin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061 		JBrowse link
G PFN2 profilin 2 involved_in IMP
IBA		 (PMID:23153535) UniProt
GO_Central		 PMID:23153535 GO_REF:0000033 NCBI chr 3:149,964,904...149,970,895
Ensembl chr 3:149,964,904...150,050,788 		JBrowse link
G PFN3 profilin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:177,400,109...177,400,661
Ensembl chr 5:177,400,109...177,400,661 		JBrowse link
G PLEK pleckstrin involved_in IDA (PMID:10497244) BHF-UCL PMID:10497244 NCBI chr 2:68,365,282...68,397,453
Ensembl chr 2:68,365,282...68,397,453 		JBrowse link
G SWAP70 switching B cell complex subunit SWAP70 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:9,664,077...9,752,993
Ensembl chr11:9,664,077...9,752,993 		JBrowse link
G SYNPO synaptopodin involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:150,586,010...150,659,207
Ensembl chr 5:150,601,080...150,659,207 		JBrowse link
G SYNPO2 synaptopodin 2 involved_in IDA
IBA
IEA		 (PMID:24005909) UniProt
GO_Central
TreeGrafter		 PMID:24005909 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:118,850,681...119,061,247
Ensembl chr 4:118,850,688...119,061,247 		JBrowse link
G SYNPO2L synaptopodin 2 like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:73,644,886...73,656,029
Ensembl chr10:73,644,881...73,663,803 		JBrowse link
G VIL1 villin 1 involved_in IDA (PMID:19808673) UniProt PMID:19808673 NCBI chr 2:218,419,123...218,453,295
Ensembl chr 2:218,419,121...218,453,295 		JBrowse link
positive regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IMP (PMID:24863063) BHF-UCL PMID:24863063 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G AMOT angiomotin involved_in TAS (PMID:16043488) UniProt PMID:16043488 NCBI chr  X:112,774,877...112,840,831
Ensembl chr  X:112,774,503...112,840,831 		JBrowse link
G APOA1 apolipoprotein A1 involved_in IDA (PMID:23726972) UniProt PMID:23726972 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G ARHGEF10 Rho guanine nucleotide exchange factor 10 involved_in IMP
IBA
IEA		 (PMID:16896804) BHF-UCL
GO_Central
TreeGrafter		 PMID:16896804 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:1,823,300...1,958,641
Ensembl chr 8:1,823,926...1,958,641 		JBrowse link
G ARHGEF10L Rho guanine nucleotide exchange factor 10 like involved_in IDA
IEA
IBA		 (PMID:16112081) HGNC-UCL
TreeGrafter
GO_Central		 PMID:16112081 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:17,513,435...17,697,875
Ensembl chr 1:17,539,698...17,697,874 		JBrowse link
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:8,310,241...8,322,511
Ensembl chr17:8,310,241...8,322,514 		JBrowse link
G ARHGEF5 Rho guanine nucleotide exchange factor 5 involved_in IMP (PMID:15601624) UniProt PMID:15601624 NCBI chr 7:144,355,402...144,380,632
Ensembl chr 7:144,355,288...144,380,632 		JBrowse link
G BAG4 BAG cochaperone 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,176,855...38,213,301
Ensembl chr 8:38,176,533...38,213,301 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15199148) Ensembl
MGI		 PMID:15199148 GO_REF:0000107 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929 		JBrowse link
G CARMIL1 capping protein regulator and myosin 1 linker 1 involved_in IMP
IEA		 (PMID:16054028) UniProt
Ensembl		 PMID:16054028 GO_REF:0000107 NCBI chr 6:25,279,374...25,620,530
Ensembl chr 6:25,279,078...25,620,530 		JBrowse link
G CCDC88A coiled-coil domain containing 88A involved_in IMP (PMID:16139227) CACAO PMID:16139227 NCBI chr 2:55,287,842...55,419,856
Ensembl chr 2:55,287,842...55,419,895 		JBrowse link
G CCN2 cellular communication network factor 2 involved_in IDA (PMID:20008146) BHF-UCL PMID:20008146 NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372 		JBrowse link
G CD47 CD47 molecule involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 3:108,043,091...108,091,031
Ensembl chr 3:108,043,091...108,091,862 		JBrowse link
G CDC42 cell division cycle 42 involved_in IMP (PMID:26051942), (PMID:8625410) CAFA PMID:8625410 PMID:26051942 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360 		JBrowse link
G EPHA1 EPH receptor A1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:143,391,129...143,408,856
Ensembl chr 7:143,390,289...143,408,856 		JBrowse link
G EVL Enah/Vasp-like involved_in IMP (PMID:23153535) UniProt PMID:23153535 NCBI chr14:99,971,422...100,144,236
Ensembl chr14:99,971,449...100,144,236 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IMP (PMID:29496737) ARUK-UCL PMID:29496737 NCBI chr14:52,857,273...52,951,050
Ensembl chr14:52,857,268...52,952,435 		JBrowse link
G FHOD1 formin homology 2 domain containing 1 involved_in IDA (PMID:15095401) BHF-UCL PMID:15095401 NCBI chr16:67,229,389...67,247,481
Ensembl chr16:67,229,387...67,247,481 		JBrowse link
G GPR65 G protein-coupled receptor 65 involved_in IDA (PMID:15618224) BHF-UCL PMID:15618224 NCBI chr14:88,005,135...88,014,811
Ensembl chr14:88,005,135...88,014,811 		JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:9,403,475...9,423,569
Ensembl chr 2:9,403,475...9,423,528 		JBrowse link
G KISS1R KISS1 receptor ISO RGD PMID:11457843 RGD:1357971 NCBI chr19:917,333...921,005
Ensembl chr19:917,287...921,005 		JBrowse link
G LIMCH1 LIM and calponin homology domains 1 involved_in IMP
IEA
IBA		 (PMID:28228547) CACAO
TreeGrafter
GO_Central		 PMID:28228547 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:41,359,607...41,700,044
Ensembl chr 4:41,359,607...41,700,044 		JBrowse link
G LIMK1 LIM domain kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15199148) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:15199148 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:74,083,804...74,122,525
Ensembl chr 7:74,082,933...74,122,525 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:110,873,263...111,038,998
Ensembl chr 9:110,873,263...111,038,470 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15467718) Ensembl
MGI		 PMID:15467718 GO_REF:0000107 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556 		JBrowse link
G MYOC myocilin involved_in IDA (PMID:19188438) UniProt PMID:19188438 NCBI chr 1:171,635,417...171,652,688
Ensembl chr 1:171,635,417...171,652,688 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IMP (PMID:9537418) HGNC-UCL PMID:9537418 NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,556...29,698,598 		JBrowse link
G NOX4 NADPH oxidase 4 ISO RGD PMID:17511984 RGD:2324670 NCBI chr11:89,324,353...89,589,557
Ensembl chr11:89,324,353...89,498,187 		JBrowse link
G NRP1 neuropilin 1 involved_in IMP (PMID:26051942) BHF-UCL PMID:26051942 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IMP (PMID:11864573) UniProt PMID:11864573 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635 		JBrowse link
G PDLIM4 PDZ and LIM domain 4 involved_in ISO PMID:14729062
PMID:22659164		 UniProt PMID:14729062 PMID:22659164 RGD:1300470 RGD:13432282 NCBI chr 5:132,257,696...132,273,454
Ensembl chr 5:132,257,696...132,273,454 		JBrowse link
G PFN1 profilin 1 ISO RGD PMID:12740026 RGD:2324854 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061 		JBrowse link
G PFN2 profilin 2 involved_in IEA
IMP		 (PMID:23153535) Ensembl
UniProt		 PMID:23153535 GO_REF:0000107 NCBI chr 3:149,964,904...149,970,895
Ensembl chr 3:149,964,904...150,050,788 		JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E involved_in IDA (PMID:11864573) UniProt PMID:11864573 NCBI chr17:58,755,854...58,985,179
Ensembl chr17:58,755,854...58,985,179 		JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F involved_in IGI
IDA
IMP		 (PMID:26498692)
(PMID:11864573)
(PMID:20016286)		 ARUK-UCL
UniProt		 PMID:11864573 PMID:20016286 PMID:26498692 NCBI chr22:21,919,425...21,952,848
Ensembl chr22:21,919,425...21,952,848 		JBrowse link
G PRKCQ protein kinase C theta ISO RGD PMID:9353339 RGD:1625621 NCBI chr10:6,394,097...6,580,646
Ensembl chr10:6,427,143...6,580,301 		JBrowse link
G PXN paxillin involved_in IMP (PMID:24863063) BHF-UCL PMID:24863063 NCBI chr12:120,210,447...120,265,730
Ensembl chr12:120,210,439...120,265,771 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IMP
IDA		 (PMID:8625410)
(PMID:23129259)		 CAFA
UniProt		 PMID:8625410 PMID:23129259 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967 		JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 involved_in IMP (PMID:21840392) UniProt PMID:21840392 NCBI chr12:47,734,363...47,758,880
Ensembl chr12:47,734,363...47,771,040 		JBrowse link
G RGCC regulator of cell cycle involved_in IDA (PMID:19158077) BHF-UCL PMID:19158077 NCBI chr13:41,457,550...41,470,871
Ensembl chr13:41,457,550...41,470,871 		JBrowse link
G RHOA ras homolog family member A involved_in
acts_upstream_of_or_within		 IMP
IDA
IEA		 (PMID:8625410)
(PMID:15467718)		 CAFA
MGI
Ensembl		 PMID:8625410 PMID:15467718 GO_REF:0000107 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998 		JBrowse link
G RHOC ras homolog family member C involved_in IMP (PMID:20232393) BHF-UCL PMID:20232393 NCBI chr 1:112,701,131...112,707,408
Ensembl chr 1:112,701,127...112,707,434 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IMP (PMID:20232393) BHF-UCL PMID:20232393 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330 		JBrowse link
G S100A10 S100 calcium binding protein A10 involved_in IMP (PMID:23129259) UniProt PMID:23129259 NCBI chr 1:151,982,915...151,993,859
Ensembl chr 1:151,982,915...151,993,859 		JBrowse link
G SDC4 syndecan 4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10504291 GO_REF:0000107 RGD:2312327 NCBI chr20:45,325,288...45,348,424
Ensembl chr20:45,325,288...45,348,424 		JBrowse link
G SERPINF2 serpin family F member 2 involved_in IDA (PMID:20008146) BHF-UCL PMID:20008146 NCBI chr17:1,742,871...1,755,265
Ensembl chr17:1,742,836...1,755,265 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr 5:172,325,181...172,454,525
Ensembl chr 5:172,325,000...172,454,525 		JBrowse link
G SMAD3 SMAD family member 3 involved_in ISO
IEA		 during transdifferentiation RGD
Ensembl		 PMID:15987742 GO_REF:0000107 RGD:2300418 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
G SORBS3 sorbin and SH3 domain containing 3 involved_in IDA (PMID:9885244) UniProt PMID:9885244 NCBI chr 8:22,544,973...22,575,788
Ensembl chr 8:22,544,986...22,575,788 		JBrowse link
G SYNPO2L synaptopodin 2 like involved_in ISS (PMID:29206857) BHF-UCL PMID:29206857 NCBI chr10:73,644,886...73,656,029
Ensembl chr10:73,644,881...73,663,803 		JBrowse link
G TAC1 tachykinin precursor 1 ISO RGD PMID:17435548 RGD:2304338 NCBI chr 7:97,732,086...97,740,472
Ensembl chr 7:97,732,084...97,740,472 		JBrowse link
G TACR1 tachykinin receptor 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:17435548 GO_REF:0000107 RGD:2304338 NCBI chr 2:75,046,463...75,199,520
Ensembl chr 2:75,046,463...75,199,520 		JBrowse link
G TESK1 testis associated actin remodelling kinase 1 involved_in IEA
IBA
ISS
TAS		 (PMID:18216281) Ensembl
TreeGrafter
GO_Central
ARUK-UCL		 PMID:18216281 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:35,605,262...35,610,033
Ensembl chr 9:35,605,262...35,610,041 		JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in IDA (PMID:18718461) BHF-UCL PMID:18718461 NCBI chr14:75,958,097...75,983,011
Ensembl chr14:75,958,097...75,983,011 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
G TPM1 tropomyosin 1 involved_in ISS (PMID:15897890) BHF-UCL PMID:15897890 NCBI chr15:63,042,747...63,071,915
Ensembl chr15:63,042,620...63,071,915 		JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:15611338 RGD:1601406 NCBI chr 9:132,891,349...132,945,378
Ensembl chr 9:132,891,348...132,946,874 		JBrowse link
G WNT11 Wnt family member 11 involved_in IMP (PMID:20103596) UniProt PMID:20103596 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736 		JBrowse link
G WNT4 Wnt family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969 		JBrowse link
regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLNA filamin A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:154,348,531...154,374,634
Ensembl chr  X:154,348,524...154,374,634 		JBrowse link
G RDX radixin involved_in IMP (PMID:22467863) UniProt PMID:22467863 NCBI chr11:110,174,922...110,296,614
Ensembl chr11:109,864,295...110,296,712 		JBrowse link
regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 involved_in IMP (PMID:25705373) ARUK-UCL PMID:25705373 NCBI chr17:81,509,971...81,512,799
Ensembl chr17:81,509,413...81,523,847 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within IMP (PMID:22693585) MGI PMID:22693585 NCBI chr 2:73,385,758...73,609,919
Ensembl chr 2:73,385,758...73,625,166 		JBrowse link
G ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 involved_in IMP
IBA
IEA		 (PMID:18400762) UniProt
GO_Central
TreeGrafter		 PMID:18400762 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:23,428,563...23,484,631
Ensembl chr 1:23,428,563...23,484,637 		JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23716571) Ensembl
MGI		 PMID:23716571 GO_REF:0000107 NCBI chr15:72,686,207...72,738,473
Ensembl chr15:72,686,179...72,738,475 		JBrowse link
G CDC42 cell division cycle 42 involved_in IGI (PMID:8625410) CAFA PMID:8625410 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360 		JBrowse link
G FHOD1 formin homology 2 domain containing 1 involved_in IMP (PMID:16361249) CAFA PMID:16361249 NCBI chr16:67,229,389...67,247,481
Ensembl chr16:67,229,387...67,247,481 		JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23716571) Ensembl
MGI		 PMID:23716571 GO_REF:0000107 NCBI chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25217619) Ensembl
MGI		 PMID:25217619 GO_REF:0000107 NCBI chr 5:68,215,756...68,301,821
Ensembl chr 5:68,215,740...68,301,821 		JBrowse link
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25217619) Ensembl
MGI		 PMID:25217619 GO_REF:0000107 NCBI chr19:18,153,163...18,170,532
Ensembl chr19:18,153,163...18,170,532 		JBrowse link
G PTGER4 prostaglandin E receptor 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:40,679,915...40,746,800
Ensembl chr 5:40,679,915...40,693,735 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IGI (PMID:8625410) CAFA PMID:8625410 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in TAS (PMID:12778124) UniProt PMID:12778124 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,944,612...21,111,813 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in TAS (PMID:12778124) UniProt PMID:12778124 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330 		JBrowse link
G SLC9A1 solute carrier family 9 member A1 involved_in TAS (PMID:17565280) BHF-UCL PMID:17565280 NCBI chr 1:27,098,809...27,155,125
Ensembl chr 1:27,098,809...27,166,981 		JBrowse link
G SYNPO synaptopodin involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:150,586,010...150,659,207
Ensembl chr 5:150,601,080...150,659,207 		JBrowse link
G TSC1 TSC complex subunit 1 involved_in IDA (PMID:10806479) UniProt PMID:10806479 NCBI chr 9:132,891,349...132,945,378
Ensembl chr 9:132,891,348...132,946,874 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23716571) Ensembl
MGI		 PMID:23716571 GO_REF:0000107 NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in IGI (PMID:8625410) CAFA PMID:8625410 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431 		JBrowse link
stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 involved_in IMP (PMID:15611106) UniProt PMID:15611106 NCBI chr11:75,260,122...75,351,661
Ensembl chr11:75,260,122...75,351,705 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15199148) Ensembl
MGI		 PMID:15199148 GO_REF:0000107 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929 		JBrowse link
G CUL3 cullin 3 involved_in IMP (PMID:19782033) UniProt PMID:19782033 NCBI chr 2:224,470,150...224,585,363
Ensembl chr 2:224,470,150...224,585,397 		JBrowse link
G DNM2 dynamin 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:10,718,079...10,831,903
Ensembl chr19:10,718,055...10,833,488 		JBrowse link
G ELN elastin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14614988) Ensembl
MGI		 PMID:14614988 GO_REF:0000107 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907 		JBrowse link
G FAM171A1 family with sequence similarity 171 member A1 involved_in IMP
IBA
IEA		 (PMID:30312582) UniProt
GO_Central
TreeGrafter		 PMID:30312582 GO_REF:0000033 GO_REF:0000118 NCBI chr10:15,211,643...15,374,554
Ensembl chr10:15,211,643...15,371,289 		JBrowse link
G FHDC1 FH2 domain containing 1 involved_in IDA (PMID:18815276) UniProt PMID:18815276 NCBI chr 4:152,911,339...152,979,671
Ensembl chr 4:152,936,323...152,979,671 		JBrowse link
G ITGB1 integrin subunit beta 1 NOT|involved_in IMP (PMID:24036928) UniProt PMID:24036928 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792 		JBrowse link
G ITGB5 integrin subunit beta 5 involved_in IMP
IBA		 (PMID:24036928) UniProt
GO_Central		 PMID:24036928 GO_REF:0000033 NCBI chr 3:124,761,948...124,901,418
Ensembl chr 3:124,761,948...124,901,418 		JBrowse link
G KCTD13 potassium channel tetramerization domain containing 13 involved_in IMP (PMID:19782033) UniProt PMID:19782033 NCBI chr16:29,906,339...29,926,226
Ensembl chr16:29,905,012...29,926,236 		JBrowse link
G LIMK1 LIM domain kinase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15199148) Ensembl
MGI		 PMID:15199148 GO_REF:0000107 NCBI chr 7:74,083,804...74,122,525
Ensembl chr 7:74,082,933...74,122,525 		JBrowse link
G PDCD10 programmed cell death 10 NOT|involved_in IMP (PMID:20332113) UniProt PMID:20332113 NCBI chr 3:167,683,298...167,734,892
Ensembl chr 3:167,683,298...167,734,939 		JBrowse link
G PDLIM1 PDZ and LIM domain 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:95,237,572...95,291,003
Ensembl chr10:95,237,572...95,291,012 		JBrowse link
G PHACTR1 phosphatase and actin regulator 1 involved_in IEA
IBA
IMP		 (PMID:22976292) Ensembl
GO_Central
TreeGrafter
UniProt		 PMID:22976292 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:12,716,767...13,287,837
Ensembl chr 6:12,716,312...13,290,446 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:11739395 GO_REF:0000107 RGD:70597 NCBI chr 8:27,310,506...27,459,391
Ensembl chr 8:27,311,482...27,459,391 		JBrowse link
G RHOA ras homolog family member A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:10699171), (PMID:14614988)
(PMID:19782033), (PMID:31570889)		 Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:10699171 PMID:14614988 PMID:19782033 PMID:31570889 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:95,311,773...95,561,371
Ensembl chr10:95,311,771...95,561,414 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP (PMID:24036928) UniProt PMID:24036928 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20525922) Ensembl
MGI		 PMID:20525922 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G TNFAIP1 TNF alpha induced protein 1 involved_in IMP (PMID:19782033) UniProt PMID:19782033 NCBI chr17:28,335,761...28,347,009
Ensembl chr17:28,335,602...28,347,009 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:31784544 GO_REF:0000107 RGD:155882534 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057 		JBrowse link
G ZYX zyxin involved_in IMP (PMID:24036928) UniProt PMID:24036928 NCBI chr 7:143,381,345...143,391,111
Ensembl chr 7:143,381,295...143,391,111 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    cellular process 18300
      cellular component organization or biogenesis 7533
        cellular component organization 7308
          cellular component assembly 3535
            actin filament bundle assembly 189
              actin rod assembly 2
              actomyosin contractile ring actin filament bundle assembly + 0
              contractile actin filament bundle assembly + 123
              negative regulation of actin filament bundle assembly + 41
              parallel actin filament bundle assembly + 7
              positive regulation of actin filament bundle assembly + 71
              regulation of actin filament bundle assembly + 121
Path 2
Term Annotations click to browse term
  biological_process 19669
    cellular process 18300
      cellular component organization or biogenesis 7533
        cellular component organization 7308
          organelle organization 3966
            cytoskeleton organization 1659
              actin cytoskeleton organization 813
                actin filament organization 520
                  actin filament bundle organization 193
                    actin filament bundle assembly 189
                      actin rod assembly 2
                      actomyosin contractile ring actin filament bundle assembly + 0
                      contractile actin filament bundle assembly + 123
                      negative regulation of actin filament bundle assembly + 41
                      parallel actin filament bundle assembly + 7
                      positive regulation of actin filament bundle assembly + 71
                      regulation of actin filament bundle assembly + 121
paths to the root