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ONTOLOGY REPORT - ANNOTATIONS

Term:actin filament bundle assembly
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Accession:GO:0051017 term browser browse the term
Definition:The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.
Synonyms:related_synonym: actin bundling activity;   actin cable assembly;   actin cable formation
 alt_id: GO:0045011


show annotations for term's descendants           Sort by:
actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:11752434) RGD PMID:11752434 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:71,224,019...71,389,775 		JBrowse link
G Actn1 actinin, alpha 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:16043482) 		Ensembl
RGD		 PMID:16043482 GO_REF:0000107 NCBI chr 6:104,731,485...104,826,312
Ensembl chr 6:104,731,485...104,826,172 		JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (PMID:15841212) RGD PMID:15841212 NCBI chr 1:93,310,294...93,379,369
Ensembl chr 1:93,310,278...93,379,320 		JBrowse link
G Add1 adducin 1 involved_in ISO (PMID:3693401) RGD PMID:3693401 NCBI chr14:80,333,242...80,401,641
Ensembl chr14:80,333,244...80,391,732 		JBrowse link
G Add2 adducin 2 involved_in ISO
IEA 		(PMID:3693401)
GO_REF:0000107 		RGD
Ensembl		 PMID:3693401 GO_REF:0000107 NCBI chr 4:118,444,594...118,538,505
Ensembl chr 4:120,002,054...120,101,091 		JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in
acts_upstream_of_or_within 		ISO
IBA
ISS 		(PMID:18699778)
(PMID:14756805)
GO_REF:0000033
GO_REF:0000024 		RGD
GO_Central
UniProt		 PMID:14756805 PMID:18699778 GO_REF:0000024 GO_REF:0000033 NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,652,243...3,657,339 		JBrowse link
G Aif1l allograft inflammatory factor 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:35,627,239...35,651,793
Ensembl chr 3:35,627,239...35,651,793 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:17115031)
MGI:104684 (PMID:19208628)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:17115031 PMID:19208628 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:105,721,371...105,788,549
Ensembl chr10:105,721,417...105,788,549 		JBrowse link
G Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:15,364,090...15,453,602
Ensembl chr12:15,364,109...15,453,605 		JBrowse link
G Baiap2l2 BAR/IMD domain containing adaptor protein 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:112,704,798...112,731,691
Ensembl chr 7:112,704,682...112,731,127 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO
IEA 		(PMID:19116644)
GO_REF:0000107 		RGD
Ensembl		 PMID:19116644 GO_REF:0000107 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:130,268,442...130,281,360 		JBrowse link
G Cald1 caldesmon 1 involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:3384851 GO_REF:0000033, RGD:2303065 NCBI chr 4:64,232,906...64,414,085
Ensembl chr 4:64,233,171...64,414,085 		JBrowse link
G Coro1b coronin 1B involved_in IEA
ISO 		GO_REF:0000107
(PMID:17456547) 		Ensembl
RGD		 PMID:17456547 GO_REF:0000107 NCBI chr 1:210,872,437...210,877,876
Ensembl chr 1:210,871,841...210,877,876 		JBrowse link
G Dbnl drebrin-like NOT|acts_upstream_of_or_within ISO (PMID:10637315) RGD PMID:10637315 NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133 		JBrowse link
G Diaph3 diaphanous-related formin 3 acts_upstream_of_or_within ISO
IEA 		MGI:5574347 (PMID:18264091), (PMID:24239357)
GO_REF:0000107 		RGD
Ensembl		 PMID:18264091 PMID:24239357 GO_REF:0000107 NCBI chr15:62,543,375...63,013,060
Ensembl chr15:68,951,989...69,421,552 		JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (PMID:19241372), (PMID:23355471) RGD PMID:19241372 PMID:23355471 NCBI chr15:52,087,667...52,111,956
Ensembl chr15:52,087,667...52,112,128 		JBrowse link
G Dpysl3 dihydropyrimidinase-like 3 involved_in IDA PMID:16181627 UniProt PMID:16181627 RGD:8553533 NCBI chr18:35,625,357...35,731,152
Ensembl chr18:35,625,357...35,731,152 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
(PMID:17115031), (PMID:20532239)
MGI:2137336 (PMID:19208628)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17115031 PMID:19208628 PMID:20532239 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Espn espin acts_upstream_of_or_within
involved_in 		NAS
ISO
IBA 		(PMID:10588661)
GO_REF:0000033 		RGD
GO_Central		 PMID:10588661 PMID:8799813 GO_REF:0000033, RGD:632658 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Espnl espin-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:99,358,907...99,385,439
Ensembl chr 9:99,359,578...99,384,342 		JBrowse link
G Ezr ezrin involved_in ISO
IEA
ISS 		(PMID:10793131)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:10793131 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:49,373,033...49,416,573
Ensembl chr 1:49,373,035...49,416,573 		JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:21969592)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:21969592 GO_REF:0000024 GO_REF:0000033 NCBI chr15:19,038,726...19,060,644
Ensembl chr15:19,038,616...19,065,219 		JBrowse link
G Fmn2 formin 2 acts_upstream_of_or_within ISO
IEA 		(PMID:23439682)
GO_REF:0000107 		RGD
Ensembl		 PMID:23439682 GO_REF:0000107 NCBI chr13:88,986,863...89,303,789
Ensembl chr13:88,986,842...89,303,789 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in
acts_upstream_of_or_within 		IDA
IEA
ISO
IBA 		PMID:8769857
GO_REF:0000117
GO_REF:0000107
(PMID:17671164), (PMID:7738015)
GO_REF:0000033
(PMID:20393565) 		UniProt
Ensembl
RGD
GO_Central		 PMID:7738015 PMID:17671164 PMID:20393565 PMID:8769857 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:2317774 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:16,710,601...16,723,734 		JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:106,121,038...106,139,683
Ensembl chr10:106,133,144...106,139,683 		JBrowse link
G Fscn3 fascin actin-bundling protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:57,042,797...57,052,224
Ensembl chr 4:58,008,230...58,017,673 		JBrowse link
G Gas7 growth arrest specific 7 acts_upstream_of_or_within ISO (PMID:11795944) RGD PMID:11795944 NCBI chr10:52,651,690...52,882,244
Ensembl chr10:52,651,690...52,882,244 		JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:16636079)
GO_REF:0000107
GO_REF:0000002
(PMID:14756805)
GO_REF:0000033 		RGD
Ensembl
InterPro
GO_Central		 PMID:14756805 PMID:16636079 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:56,846,375...56,954,090
Ensembl chr15:56,847,433...56,954,092 		JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:12566430), (PMID:33999101)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:12566430 PMID:33999101 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:130,901,717...131,001,512
Ensembl chr 7:132,780,556...132,880,386 		JBrowse link
G Limd2 LIM domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,590,079...91,592,747
Ensembl chr10:91,590,082...91,592,439 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in IEA
ISO 		GO_REF:0000107
(PMID:15640140) 		Ensembl
RGD		 PMID:15640140 GO_REF:0000107 NCBI chr20:42,240,185...42,245,882
Ensembl chr20:42,240,185...42,245,882 		JBrowse link
G Myh10 myosin heavy chain 10 involved_in IMP
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:22992457 GO_REF:0000117, RGD:12798526 NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,893,166...54,024,036 		JBrowse link
G Myh11 myosin heavy chain 11 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:1,250,554...1,345,681
Ensembl chr10:1,263,194...1,345,678 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in IMP
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:22992457 GO_REF:0000117, RGD:12798526 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:111,224,291...111,304,963 		JBrowse link
G Myo1b myosin Ib involved_in IDA PMID:15475577 UniProt PMID:15475577 RGD:8554400 NCBI chr 9:57,182,059...57,344,335
Ensembl chr 9:57,181,987...57,344,328 		JBrowse link
G Pawr pro-apoptotic WT1 regulator involved_in IDA PMID:16229834 UniProt PMID:16229834 RGD:8554822 NCBI chr 7:45,531,480...45,611,492
Ensembl chr 7:45,531,637...45,611,492 		JBrowse link
G Pls1 plastin 1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:105,196,312...105,306,252
Ensembl chr 8:105,197,455...105,292,447 		JBrowse link
G Pls3 plastin 3 involved_in IEA
IBA 		GO_REF:0000002
GO_REF:0000033 		InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:116,401,247...116,495,898
Ensembl chr  X:116,401,293...116,495,893 		JBrowse link
G Rhod ras homolog family member D involved_in ISO
IEA 		(PMID:23087206)
GO_REF:0000107 		RGD
Ensembl		 PMID:23087206 GO_REF:0000107 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:211,138,126...211,152,061 		JBrowse link
G Shroom1 shroom family member 1 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:16684770) 		GO_Central
Ensembl
RGD		 PMID:16684770 GO_REF:0000033 GO_REF:0000107 NCBI chr10:37,621,149...37,631,895
Ensembl chr10:38,122,500...38,132,435 		JBrowse link
G Shroom2 shroom family member 2 NOT|involved_in ISO (PMID:16684770) RGD PMID:16684770 NCBI chr  X:21,812,469...21,983,724
Ensembl chr  X:25,308,163...25,479,385 		JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 involved_in ISO
IEA 		(PMID:23921380)
GO_REF:0000107 		RGD
Ensembl		 PMID:23921380 GO_REF:0000107 NCBI chr 1:173,702,338...173,763,540
Ensembl chr 1:173,702,347...173,763,947 		JBrowse link
G Ush1c USH1 protein network component harmonin acts_upstream_of_or_within ISO (PMID:12485990) RGD PMID:12485990 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
actin rod assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90b1 heat shock protein 90 beta family member 1 acts_upstream_of_or_within ISO
IEA 		(PMID:19000834)
GO_REF:0000107 		RGD
Ensembl		 PMID:19000834 GO_REF:0000107 NCBI chr 7:22,997,962...23,012,293
Ensembl chr 7:22,997,962...23,012,293 		JBrowse link
G Pdxp pyridoxal phosphatase acts_upstream_of_or_within ISO
IEA 		(PMID:19000834)
GO_REF:0000107 		RGD
Ensembl		 PMID:19000834 GO_REF:0000107 NCBI chr 7:112,352,971...112,358,419
Ensembl chr 7:112,352,726...112,358,419 		JBrowse link
contractile actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor acts_upstream_of_or_within ISO
IEA 		MGI:3522206|MGI:3522214 (PMID:15569937)
GO_REF:0000107 		RGD
Ensembl		 PMID:15569937 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:21,924,076...21,933,337 		JBrowse link
formin-nucleated actin cable assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn2 formin 2 involved_in ISO
IBA
IEA 		(PMID:26287480)
(PMID:21620703)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000117 		RGD
GO_Central
Ensembl
UniProt		 PMID:21620703 PMID:26287480 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr13:88,986,863...89,303,789
Ensembl chr13:88,986,842...89,303,789 		JBrowse link
G Spire1 spire-type actin nucleation factor 1 involved_in ISO
IEA 		(PMID:26287480)
(PMID:21620703)
GO_REF:0000107
GO_REF:0000117 		RGD
Ensembl
UniProt		 PMID:21620703 PMID:26287480 GO_REF:0000107 GO_REF:0000117 NCBI chr18:63,311,800...63,441,545
Ensembl chr18:63,311,800...63,441,534 		JBrowse link
G Spire2 spire-type actin nucleation factor 2 involved_in ISO
IEA 		(PMID:26287480)
(PMID:21620703)
GO_REF:0000107
GO_REF:0000117 		RGD
Ensembl
UniProt		 PMID:21620703 PMID:26287480 GO_REF:0000107 GO_REF:0000117 NCBI chr19:68,281,878...68,320,427
Ensembl chr19:68,281,870...68,320,427 		JBrowse link
microvillar actin bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Espn espin involved_in ISO
IEA 		(PMID:29572253)
GO_REF:0000107 		RGD
Ensembl		 PMID:29572253 GO_REF:0000107 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Myo1a myosin IA NAS RGD PMID:7779104 RGD:69898 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:65,428,258...65,443,213 		JBrowse link
negative regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:212,226,121...212,231,353 		JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:8769857 RGD:2317774 NCBI chr17:9,155,729...9,170,121
Ensembl chr17:9,155,787...9,170,122 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA prevents phenylephrine-induced actin organization RGD PMID:9155015 RGD:2293527 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:45,081,889...45,149,897 		JBrowse link
G Pfn1 profilin 1 involved_in ISO
IEA 		(PMID:23153535)
GO_REF:0000107 		RGD
Ensembl		 PMID:23153535 GO_REF:0000107 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA 		(PMID:17512523)
GO_REF:0000107 		RGD
Ensembl		 PMID:17512523 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:51,210,330...52,430,304 		JBrowse link
G Rab40b Rab40b, member RAS oncogene family involved_in ISO (PMID:33999101) RGD PMID:33999101 NCBI chr10:106,631,514...106,659,090
Ensembl chr10:107,129,801...107,157,457 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19208628) 		BHF-UCL
Ensembl
RGD		 PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:103,944,416...103,993,887
Ensembl chr 1:103,944,813...103,992,356 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19208628) 		BHF-UCL
Ensembl
RGD		 PMID:19208628 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410 		JBrowse link
negative regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 involved_in ISO
IEA 		(PMID:11804590)
GO_REF:0000107 		RGD
Ensembl		 PMID:11804590 GO_REF:0000107 NCBI chr 1:165,160,701...165,226,219
Ensembl chr 1:165,160,678...165,226,218 		JBrowse link
G Arhgap28 Rho GTPase activating protein 28 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:25211221) 		GO_Central
Ensembl
RGD		 PMID:25211221 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:115,277,849...115,444,789
Ensembl chr 9:115,279,734...115,445,008 		JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO
IEA 		(PMID:10699171)
GO_REF:0000107 		RGD
Ensembl		 PMID:10699171 GO_REF:0000107 NCBI chr  X:28,525,912...29,062,344
Ensembl chr  X:28,525,917...29,061,244 		JBrowse link
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr12:6,192,958...6,300,997
Ensembl chr12:6,128,661...6,300,997 		JBrowse link
G Cgnl1 cingulin-like 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 8:81,154,169...81,305,598
Ensembl chr 8:81,140,091...81,305,747 		JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:32,046,362...32,267,954
Ensembl chr13:32,046,444...32,267,924 		JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:122,555,524...122,737,587 		JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO
IEA 		MGI:4419137 (PMID:29162887)
GO_REF:0000107 		RGD
Ensembl		 PMID:29162887 GO_REF:0000107 NCBI chr 8:71,802,329...71,912,739
Ensembl chr 8:71,802,329...71,912,739 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO
IEA 		(PMID:17932950)
GO_REF:0000107 		RGD
Ensembl		 PMID:17932950 GO_REF:0000107 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:61,995,001...62,374,819 		JBrowse link
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819
Ensembl chr13:86,406,218...86,429,816 		JBrowse link
G Frmd7 FERM domain containing 7 acts_upstream_of_or_within ISO
IEA 		(PMID:23967341)
GO_REF:0000107 		RGD
Ensembl		 PMID:23967341 GO_REF:0000107 NCBI chr  X:130,375,925...130,423,836
Ensembl chr  X:135,261,029...135,308,786 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO
IEA 		(PMID:12556481)
GO_REF:0000107 		RGD
Ensembl		 PMID:12556481 GO_REF:0000107 NCBI chr10:60,974,183...60,995,047
Ensembl chr10:60,973,950...60,995,046 		JBrowse link
G LOC102551813 stathmin-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:96,217,025...96,222,032
Ensembl chr 5:151,964,351...151,970,842 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA 		(PMID:25198505)
GO_REF:0000107 		RGD
Ensembl		 PMID:25198505 GO_REF:0000107 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:46,756,506...46,870,821 		JBrowse link
G Mir138-1 microRNA 138-1 involved_in ISO (PMID:20232393) RGD PMID:20232393 NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:131,178,434...131,178,532 		JBrowse link
G Mir138-2 microRNA 138-2 involved_in ISO (PMID:20232393) RGD PMID:20232393 NCBI chr19:10,680,133...10,680,214 JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:22696064) RGD PMID:22696064 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:98,588,303...98,588,387 		JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:21347332) RGD PMID:21347332 NCBI chr10:71,902,600...71,902,691 JBrowse link
G Myoc myocilin involved_in ISO
IEA
ISS 		(PMID:17984096)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:17984096 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:77,509,963...77,520,361 		JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 IDA RGD PMID:21712390 RGD:7245493 NCBI chr 2:184,762,242...184,765,176
Ensembl chr 2:184,762,245...184,771,428 		JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA 		(PMID:25753039)
GO_REF:0000107 		RGD
Ensembl		 PMID:25753039 GO_REF:0000107 NCBI chr11:82,212,896...82,273,803
Ensembl chr11:82,212,951...82,273,803 		JBrowse link
G Pfn1 profilin 1 involved_in ISO
IEA 		(PMID:23153535)
GO_REF:0000107 		RGD
Ensembl		 PMID:23153535 GO_REF:0000107 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611 		JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO
IEA 		(PMID:24859005)
GO_REF:0000107 		RGD
Ensembl		 PMID:24859005 GO_REF:0000107 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:68,355,959...68,540,734 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:11038173) RGD PMID:11038173 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347 		JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 acts_upstream_of_or_within ISO
IEA 		(PMID:22266902)
GO_REF:0000107 		RGD
Ensembl		 PMID:22266902 GO_REF:0000107 NCBI chr 1:209,070,608...209,147,740
Ensembl chr 1:209,070,608...209,150,265 		JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:12052877 RGD:1299363 NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,988,827...34,258,927 		JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
(PMID:25071083) 		GO_Central
RGD		 PMID:25071083 GO_REF:0000033 NCBI chr 7:109,272,676...109,283,444
Ensembl chr 7:109,272,715...109,283,444 		JBrowse link
G Rhpn2 rhophilin, Rho GTPase binding protein 2 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:25071083)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25071083 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:87,991,143...88,051,895
Ensembl chr 1:97,127,697...97,188,803 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 IDA RGD PMID:11094076 RGD:1581790 NCBI chr 2:206,309,715...206,314,070
Ensembl chr 2:205,900,836...206,328,689 		JBrowse link
G Stmn1 stathmin 1 involved_in ISO
IEA 		(PMID:25198505)
GO_REF:0000107 		RGD
Ensembl		 PMID:25198505 GO_REF:0000107 NCBI chr 5:151,964,308...151,970,843
Ensembl chr 5:151,964,351...151,970,842 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:22194864)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:22194864 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:96,707,950...96,709,650
Ensembl chr 4:98,033,251...98,039,323 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:128,260,330...128,505,158 		JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 acts_upstream_of_or_within ISO
IEA 		(PMID:24632071)
GO_REF:0000107 		RGD
Ensembl		 PMID:24632071 GO_REF:0000107 NCBI chr 9:57,937,873...58,225,372
Ensembl chr 9:57,937,873...58,225,372 		JBrowse link
G Tmsb15b2 thymosin beta 15B2 acts_upstream_of_or_within ISO (PMID:19233202) RGD PMID:19233202 NCBI chr  X:100,298,705...100,300,820
Ensembl chr  X:105,090,980...105,093,094 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO
IEA 		(PMID:8625410)
GO_REF:0000107 		RGD
Ensembl		 PMID:8625410 GO_REF:0000107 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:17,073,314...17,085,802 		JBrowse link
G Wasf2 WASP family member 2 involved_in ISO
IEA 		(PMID:21107423)
GO_REF:0000107 		RGD
Ensembl		 PMID:21107423 GO_REF:0000107 NCBI chr 5:150,620,733...150,685,943
Ensembl chr 5:150,620,733...150,685,943 		JBrowse link
parallel actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aif1 allograft inflammatory factor 1 involved_in ISO (PMID:11500035) RGD PMID:11500035 NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,652,243...3,657,339 		JBrowse link
G Espn espin acts_upstream_of_or_within ISO (PMID:10588661) RGD PMID:10588661 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISO
IEA 		(PMID:21685497)
GO_REF:0000107 		RGD
Ensembl		 PMID:21685497 GO_REF:0000107 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:16,710,601...16,723,734 		JBrowse link
G Ush1c USH1 protein network component harmonin acts_upstream_of_or_within ISO (PMID:12485990) RGD PMID:12485990 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
positive regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO
IEA 		UniProtKB:P35411 (PMID:10415068)
GO_REF:0000107 		RGD
Ensembl		 PMID:10415068 GO_REF:0000107 NCBI chr19:10,233,326...10,244,856
Ensembl chr19:10,233,329...10,242,999 		JBrowse link
G ENSRNOG00000068258 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Flna filamin A IMP RGD PMID:22872576 RGD:7207404 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:157,159,051...157,182,343 		JBrowse link
G Id1 inhibitor of DNA binding 1 IMP RGD PMID:16628634 RGD:9686088 NCBI chr 3:161,671,525...161,672,691
Ensembl chr 3:161,671,538...161,672,685 		JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in ISO (PMID:33999101) RGD PMID:33999101 NCBI chr 7:130,901,717...131,001,512
Ensembl chr 7:132,780,556...132,880,386 		JBrowse link
G Limk1 LIM domain kinase 1 involved_in ISO
IEA 		(PMID:17512523)
GO_REF:0000107 		RGD
Ensembl		 PMID:17512523 GO_REF:0000107 NCBI chr12:27,663,177...27,697,085
Ensembl chr12:27,663,018...27,697,209 		JBrowse link
G LOC102551431 profilin-2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,478,445...60,478,837
Ensembl chr  X:64,487,904...64,488,365 		JBrowse link
G Mk1 Mk1 protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,780,819...18,783,308 JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:5319219 (PMID:21406566) 		GO_Central
RGD		 PMID:21406566 GO_REF:0000033 NCBI chr 7:92,378,228...92,517,444
Ensembl chr 7:92,378,238...92,517,303 		JBrowse link
G Pfn1 profilin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611 		JBrowse link
G Pfn2 profilin 2 involved_in ISO
IEA
IBA 		(PMID:23153535)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:23153535 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:142,067,102...142,072,938
Ensembl chr 2:144,205,636...144,222,936 		JBrowse link
G Pfn3 profilin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:9,217,595...9,218,122
Ensembl chr17:9,222,719...9,223,249 		JBrowse link
G Pgpep1 pyroglutamyl-peptidase I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,770,563...18,782,968
Ensembl chr16:18,805,009...18,817,462 		JBrowse link
G Plek pleckstrin involved_in ISO
IEA 		(PMID:10497244)
GO_REF:0000107 		RGD
Ensembl		 PMID:10497244 GO_REF:0000107 NCBI chr14:95,598,650...95,631,326
Ensembl chr14:95,598,654...95,655,721 		JBrowse link
G Swap70 switching B-cell complex subunit SWAP70 involved_in ISO
IEA 		(PMID:23921380)
GO_REF:0000107 		RGD
Ensembl		 PMID:23921380 GO_REF:0000107 NCBI chr 1:173,702,338...173,763,540
Ensembl chr 1:173,702,347...173,763,947 		JBrowse link
G Synpo synaptopodin involved_in ISO
IBA 		(PMID:15841212)
GO_REF:0000033 		RGD
GO_Central		 PMID:15841212 GO_REF:0000033 NCBI chr18:54,048,299...54,106,388
Ensembl chr18:56,319,571...56,353,306 		JBrowse link
G Synpo2 synaptopodin 2 involved_in ISO
IBA 		(PMID:24005909)
GO_REF:0000033 		RGD
GO_Central		 PMID:24005909 GO_REF:0000033 NCBI chr 2:213,901,685...214,055,844
Ensembl chr 2:213,900,868...214,055,844 		JBrowse link
G Synpo2l synaptopodin 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:3,631,974...3,641,429
Ensembl chr15:3,681,104...3,690,673 		JBrowse link
G Vil1 villin 1 involved_in ISO
IEA 		(PMID:19808673)
GO_REF:0000107 		RGD
Ensembl		 PMID:19808673 GO_REF:0000107 NCBI chr 9:83,440,248...83,467,963
Ensembl chr 9:83,440,248...83,467,961 		JBrowse link
positive regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO
IEA 		(PMID:24863063)
GO_REF:0000107 		RGD
Ensembl		 PMID:24863063 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA 		(PMID:23726972)
GO_REF:0000107 		RGD
Ensembl		 PMID:23726972 GO_REF:0000107 NCBI chr 8:55,423,945...55,425,729
Ensembl chr 8:55,423,825...55,425,729 		JBrowse link
G Arhgef10 Rho guanine nucleotide exchange factor 10 involved_in ISO
IEA
IBA 		(PMID:16896804)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:16896804 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr16:81,349,429...81,440,439
Ensembl chr16:81,349,429...81,440,054 		JBrowse link
G Arhgef10l Rho guanine nucleotide exchange factor 10 like involved_in ISO
IEA
IBA 		(PMID:16112081)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:16112081 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:152,792,247...152,935,255
Ensembl chr 5:158,075,370...158,180,685 		JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in IDA PMID:12775584 UniProt PMID:12775584 RGD:8554375 NCBI chr10:53,650,521...53,663,269
Ensembl chr10:54,149,372...54,162,128 		JBrowse link
G Arhgef5 Rho guanine nucleotide exchange factor 5 involved_in ISO (PMID:15601624) RGD PMID:15601624 NCBI chr 4:73,087,240...73,112,311
Ensembl chr 4:73,087,240...73,112,311 		JBrowse link
G Bag4 BAG cochaperone 4 involved_in ISO
IEA 		(PMID:21712384)
GO_REF:0000107 		RGD
Ensembl		 PMID:21712384 GO_REF:0000107 NCBI chr16:72,991,407...73,008,620
Ensembl chr16:72,991,362...73,013,273 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:104572 (PMID:15199148) RGD PMID:15199148 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931 		JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 involved_in ISO
IEA 		(PMID:16054028)
GO_REF:0000107 		RGD
Ensembl		 PMID:16054028 GO_REF:0000107 NCBI chr17:41,235,819...41,516,204
Ensembl chr17:41,236,229...41,516,221 		JBrowse link
G Ccdc88a coiled coil domain containing 88A involved_in ISO (PMID:16139227) RGD PMID:16139227 NCBI chr14:103,104,091...103,256,112
Ensembl chr14:107,305,199...107,453,285 		JBrowse link
G Ccn2 cellular communication network factor 2 involved_in ISO
IEA 		(PMID:20008146)
GO_REF:0000107 		RGD
Ensembl		 PMID:20008146 GO_REF:0000107 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:22,621,501...22,624,976 		JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:64,374,816...64,438,763
Ensembl chr11:64,377,926...64,438,272 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:26051942), (PMID:8625410) RGD PMID:8625410 PMID:26051942 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:154,839,631...154,876,627 		JBrowse link
G Epha1 Eph receptor A1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12775584) 		UniProt
Ensembl
RGD		 PMID:12775584 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:72,213,022...72,227,543
Ensembl chr 4:72,213,037...72,227,474 		JBrowse link
G Evl Enah/Vasp-like involved_in ISO
IEA 		(PMID:23153535)
GO_REF:0000107 		RGD
Ensembl		 PMID:23153535 GO_REF:0000107 NCBI chr 6:133,238,547...133,358,730
Ensembl chr 6:133,238,547...133,358,729 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO
IEA 		(PMID:29496737)
GO_REF:0000107 		RGD
Ensembl		 PMID:29496737 GO_REF:0000107 NCBI chr15:21,162,603...21,257,995
Ensembl chr15:21,162,605...21,258,115 		JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in ISO
IBA
IEA 		(PMID:15095401)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:15095401 GO_REF:0000033 GO_REF:0000107 NCBI chr19:50,116,415...50,135,868
Ensembl chr19:50,116,415...50,135,330 		JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:16,267,830...16,700,508
Ensembl chr18:16,267,977...16,700,508 		JBrowse link
G Gpr65 G-protein coupled receptor 65 involved_in ISO
IEA 		(PMID:15618224)
GO_REF:0000107 		RGD
Ensembl		 PMID:15618224 GO_REF:0000107 NCBI chr 6:117,515,786...117,536,514
Ensembl chr 6:123,219,633...123,266,285 		JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO
IEA 		(PMID:17654484)
GO_REF:0000107 		RGD
Ensembl		 PMID:17654484 GO_REF:0000107 NCBI chr 6:46,549,994...46,564,735
Ensembl chr 6:46,549,999...46,564,398 		JBrowse link
G Kiss1r KISS1 receptor IDA RGD PMID:11457843 RGD:1357971 NCBI chr 7:9,785,135...9,790,283
Ensembl chr 7:10,435,766...10,439,424 		JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA 		(PMID:28228547)
GO_REF:0000033 		RGD
GO_Central		 PMID:28228547 GO_REF:0000033 NCBI chr14:41,466,433...41,779,477
Ensembl chr14:41,466,433...41,778,837 		JBrowse link
G Limk1 LIM domain kinase 1 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:88190 (PMID:15199148) 		GO_Central
Ensembl
RGD		 PMID:15199148 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,663,177...27,697,085
Ensembl chr12:27,663,018...27,697,209 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:9600933) 		UniProt
Ensembl
RGD		 PMID:9600933 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:78,024,139...78,142,188 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO
IEA 		(PMID:15467718)
GO_REF:0000107 		RGD
Ensembl		 PMID:15467718 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435 		JBrowse link
G Myoc myocilin involved_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:19188438) 		Ensembl
UniProt
RGD		 PMID:19188438 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:77,509,963...77,520,361 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in ISO
IEA 		(PMID:9537418)
GO_REF:0000107 		RGD
Ensembl		 PMID:9537418 GO_REF:0000107 NCBI chr14:83,850,894...83,934,263
Ensembl chr14:83,850,894...83,934,151 		JBrowse link
G Nox4 NADPH oxidase 4 IMP RGD PMID:17511984 RGD:2324670 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:150,313,728...150,491,483 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:26051942) RGD PMID:26051942 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:73,256,557...73,411,702 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
IEA
ISS 		(PMID:11864573)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:11864573 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:161,522,399...161,637,623
Ensembl chr 1:161,491,847...161,637,612 		JBrowse link
G Pdlim4 PDZ and LIM domain 4 involved_in IDA
IMP 		PMID:14729062
PMID:22659164 		UniProt PMID:14729062 PMID:22659164 RGD:1300470, RGD:13432282 NCBI chr10:38,699,444...38,713,696
Ensembl chr10:38,699,444...38,713,659 		JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611 		JBrowse link
G Pfn2 profilin 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:23153535) 		Ensembl
RGD		 PMID:23153535 GO_REF:0000107 NCBI chr 2:142,067,102...142,072,938
Ensembl chr 2:144,205,636...144,222,936 		JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E involved_in ISO
IEA
IBA 		(PMID:11864573)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:11864573 GO_REF:0000033 GO_REF:0000107 NCBI chr10:72,548,906...72,684,702
Ensembl chr10:72,552,469...72,684,546 		JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISO
IEA
IBA 		RNAcentral:URS00001C770D_9606 (PMID:11864573), (PMID:20016286), (PMID:26498692)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:11864573 PMID:20016286 PMID:26498692 GO_REF:0000033 GO_REF:0000107 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:97,568,625...97,598,545 		JBrowse link
G Prkcq protein kinase C, theta IMP RGD PMID:9353339 RGD:1625621 NCBI chr17:72,156,215...72,288,508
Ensembl chr17:72,156,215...72,288,508 		JBrowse link
G Pxn paxillin involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr12:46,721,546...46,768,706
Ensembl chr12:46,721,546...46,768,697 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:23129259), (PMID:8625410) RGD PMID:8625410 PMID:23129259 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISO
IEA
ISS 		(PMID:21840392)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:21840392 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:130,754,883...130,777,303
Ensembl chr 7:130,754,871...130,777,668 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:61,071,574...61,084,408
Ensembl chr15:61,071,574...61,084,408 		JBrowse link
G Rhoa ras homolog family member A involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:8625410)
GO_REF:0000107
(PMID:25071083)
(PMID:15467718) 		RGD
Ensembl		 PMID:8625410 PMID:15467718 PMID:25071083 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302 		JBrowse link
G Rhoc ras homolog family member C involved_in ISO
IEA 		(PMID:20232393)
GO_REF:0000107 		RGD
Ensembl		 PMID:20232393 GO_REF:0000107 NCBI chr 2:194,975,586...194,981,637
Ensembl chr 2:194,975,242...194,983,745 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:20232393), (PMID:39106863) 		Ensembl
RGD		 PMID:20232393 PMID:39106863 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771 		JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:181,904,261...181,913,103 		JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:173,574,239...173,592,923
Ensembl chr 3:173,574,239...173,593,670 		JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO
IEA 		(PMID:20008146)
GO_REF:0000107 		RGD
Ensembl		 PMID:20008146 GO_REF:0000107 NCBI chr10:60,770,698...60,778,782
Ensembl chr10:60,770,698...60,778,996 		JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:27711054) RGD PMID:27711054 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:17,422,947...17,512,854 		JBrowse link
G Smad3 SMAD family member 3 IDA during transdifferentiation RGD PMID:15987742 RGD:2300418 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:73,024,760...73,132,324 		JBrowse link
G Sorbs3 sorbin and SH3 domain containing 3 involved_in ISO
IEA 		(PMID:9885244)
GO_REF:0000107 		RGD
Ensembl		 PMID:9885244 GO_REF:0000107 NCBI chr15:45,252,921...45,284,758
Ensembl chr15:51,663,095...51,694,522 		JBrowse link
G Synpo2l synaptopodin 2-like involved_in ISO (PMID:29206857) RGD PMID:29206857 NCBI chr15:3,631,974...3,641,429
Ensembl chr15:3,681,104...3,690,673 		JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:17435548 RGD:2304338 NCBI chr 4:36,645,344...36,653,548
Ensembl chr 4:36,645,571...36,653,546 		JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:17435548 RGD:2304338 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:116,478,617...116,647,492 		JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in IDA
IBA 		PMID:18216281
GO_REF:0000033 		GO_Central PMID:18216281 GO_REF:0000033, RGD:13461749 NCBI chr 5:62,487,763...62,493,492
Ensembl chr 5:62,487,763...62,493,492 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:111,435,170...111,456,946 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:P10600 (PMID:18718461) 		Ensembl
RGD		 PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:66,449,293...66,527,260 		JBrowse link
G Tpm1 tropomyosin 1 involved_in IGI PMID:15897890 BHF-UCL PMID:15897890 RGD:8656006 NCBI chr 8:76,516,654...76,543,661
Ensembl chr 8:76,511,871...76,543,468 		JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA 		UniProtKB:P01112 (PMID:23027131)
GO_REF:0000107 		RGD
Ensembl		 PMID:23027131 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
regulation of actin filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flna filamin A involved_in ISO (PMID:20713593) RGD PMID:20713593 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:157,159,051...157,182,343 		JBrowse link
G Rdx radixin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:61,274,460...61,333,967 		JBrowse link
regulation of stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:106,118,106...106,120,951
Ensembl chr10:106,118,108...106,120,951 		JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:22693585) RGD PMID:22693585 NCBI chr 4:119,683,085...119,783,471
Ensembl chr 4:119,683,076...119,783,471 		JBrowse link
G Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 involved_in ISO
IEA
IBA 		(PMID:18400762)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:18400762 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:148,433,382...148,476,027
Ensembl chr 5:153,716,988...153,757,787 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO
IEA 		MGI:3055492 (PMID:23716571)
GO_REF:0000107 		RGD
Ensembl		 PMID:23716571 GO_REF:0000107 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:68,627,656...68,661,358 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO UniProtKB:P42768 (PMID:8625410) RGD PMID:8625410 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:154,839,631...154,876,627 		JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in ISO
IEA 		(PMID:16361249)
GO_REF:0000107 		RGD
Ensembl		 PMID:16361249 GO_REF:0000107 NCBI chr19:50,116,415...50,135,868
Ensembl chr19:50,116,415...50,135,330 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO
IEA 		MGI:3608879 (PMID:23716571)
GO_REF:0000107 		RGD
Ensembl		 PMID:23716571 GO_REF:0000107 NCBI chr 3:144,654,563...144,672,831
Ensembl chr 3:144,654,566...144,672,831 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO MGI:2149438 (PMID:25217619) RGD PMID:25217619 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347 		JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 acts_upstream_of_or_within ISO
IEA 		MGI:2159732 (PMID:25217619)
GO_REF:0000107 		RGD
Ensembl		 PMID:25217619 GO_REF:0000107 NCBI chr16:18,699,389...18,708,045
Ensembl chr16:18,699,448...18,709,665 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISS
ISO 		GO_REF:0000024
(PMID:14665434) 		UniProt
RGD		 PMID:14665434 GO_REF:0000024 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:56,062,890...56,074,135 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO UniProtKB:P42768 (PMID:8625410) RGD PMID:8625410 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109 		JBrowse link
G Synpo synaptopodin involved_in ISO (PMID:15841212) RGD PMID:15841212 NCBI chr18:54,048,299...54,106,388
Ensembl chr18:56,319,571...56,353,306 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO
IEA 		(PMID:10806479)
GO_REF:0000107 		RGD
Ensembl		 PMID:10806479 GO_REF:0000107 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO
IEA 		(PMID:23716571)
GO_REF:0000107 		RGD
Ensembl		 PMID:23716571 GO_REF:0000107 NCBI chr 6:123,927,657...124,025,354
Ensembl chr 6:123,927,907...123,982,117 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO
IEA 		UniProtKB:P60953|UniProtKB:P63000 (PMID:8625410)
GO_REF:0000107 		RGD
Ensembl		 PMID:8625410 GO_REF:0000107 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:17,073,314...17,085,802 		JBrowse link
stress fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:15611106) RGD PMID:15611106 NCBI chr 1:163,249,654...163,321,711
Ensembl chr 1:163,250,157...163,340,859 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of ISO (PMID:15199148) RGD PMID:15199148 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931 		JBrowse link
G Cul3 cullin 3 involved_in ISO
IEA 		(PMID:19782033)
GO_REF:0000107 		RGD
Ensembl		 PMID:19782033 GO_REF:0000107 NCBI chr 9:89,040,987...89,118,775
Ensembl chr 9:89,040,987...89,118,427 		JBrowse link
G Dnm2 dynamin 2 involved_in IMP PMID:35620056 UniProt PMID:35620056 RGD:401901236 NCBI chr 8:28,254,344...28,336,297
Ensembl chr 8:28,254,529...28,336,295 		JBrowse link
G Eln elastin acts_upstream_of_or_within ISO
IEA 		MGI:2153007 (PMID:14614988)
GO_REF:0000107 		RGD
Ensembl		 PMID:14614988 GO_REF:0000107 NCBI chr12:27,604,983...27,648,413
Ensembl chr12:27,604,680...27,648,413 		JBrowse link
G Fam171a1 family with sequence similarity 171, member A1 involved_in ISO
IBA 		(PMID:30312582)
GO_REF:0000033 		RGD
GO_Central		 PMID:30312582 GO_REF:0000033 NCBI chr17:75,024,582...75,148,348
Ensembl chr17:79,934,050...80,057,495 		JBrowse link
G Fhdc1 FH2 domain containing 1 involved_in ISO
IEA 		(PMID:18815276)
GO_REF:0000107 		RGD
Ensembl		 PMID:18815276 GO_REF:0000107 NCBI chr 2:169,790,917...169,829,580
Ensembl chr 2:172,089,010...172,125,956 		JBrowse link
G Itgb1 integrin subunit beta 1 NOT|involved_in ISO (PMID:24036928) RGD PMID:24036928 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:73,602,126...73,650,269 		JBrowse link
G Itgb5 integrin subunit beta 5 involved_in ISO
IEA
IBA 		(PMID:24036928)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:24036928 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr11:80,333,588...80,449,373
Ensembl chr11:80,333,590...80,449,373 		JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 involved_in ISO
IEA 		(PMID:19782033)
GO_REF:0000107 		RGD
Ensembl		 PMID:19782033 GO_REF:0000107 NCBI chr 1:190,965,073...190,983,381
Ensembl chr 1:190,965,075...190,985,419 		JBrowse link
G Limk1 LIM domain kinase 1 acts_upstream_of ISO
IEA 		MGI:88190 (PMID:15199148)
GO_REF:0000107 		RGD
Ensembl		 PMID:15199148 GO_REF:0000107 NCBI chr12:27,663,177...27,697,085
Ensembl chr12:27,663,018...27,697,209 		JBrowse link
G Luzp1 leucine zipper protein 1 involved_in ISO
IEA
ISS 		(PMID:38832964)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:38832964 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:153,989,570...154,065,071
Ensembl chr 5:153,987,683...154,070,438 		JBrowse link
G Myl9 myosin light chain 9 involved_in ISO
IEA 		(PMID:39106863)
GO_REF:0000107 		RGD
Ensembl		 PMID:39106863 GO_REF:0000107 NCBI chr 3:165,742,020...165,748,409
Ensembl chr 3:165,742,046...165,748,410 		JBrowse link
G Pdcd10 programmed cell death 10 NOT|involved_in ISO (PMID:20332113) RGD PMID:20332113 NCBI chr 2:162,602,516...162,644,690
Ensembl chr 2:162,602,516...162,644,612 		JBrowse link
G Pdlim1 PDZ and LIM domain 1 involved_in IMP PMID:22659164 UniProt PMID:22659164 RGD:13432282 NCBI chr 1:248,991,818...249,040,409
Ensembl chr 1:248,991,818...249,047,379 		JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISO
IBA
IEA
ISS 		(PMID:22976292)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:22976292 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,768,662...22,244,586 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:11739395 RGD:70597 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:44,531,249...44,656,806 		JBrowse link
G Rhoa ras homolog family member A involved_in
acts_upstream_of_or_within 		ISO
IBA
IEA
ISS 		(PMID:19782033), (PMID:31570889)
(PMID:10699171), (PMID:14614988)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024 		RGD
GO_Central
Ensembl
UniProt		 PMID:10699171 PMID:14614988 PMID:19782033 PMID:31570889 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (PMID:39106863) RGD PMID:39106863 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:9461600) 		UniProt
RGD		 PMID:9461600 GO_REF:0000024 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:249,057,324...249,279,608 		JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO
IEA 		MGI:2662475 (PMID:26585507)
GO_REF:0000107 		RGD
Ensembl		 PMID:26585507 GO_REF:0000107 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:97,677,796...97,797,154 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:24036928) RGD PMID:24036928 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA 		MGI:3522206|MGI:3764698 (PMID:20525922)
GO_REF:0000107 		RGD
Ensembl		 PMID:20525922 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:21,924,076...21,933,337 		JBrowse link
G Tnfaip1 TNF alpha induced protein 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19782033) 		UniProt
Ensembl
RGD		 PMID:19782033 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,915,824...63,930,514
Ensembl chr10:63,915,825...63,930,514 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 IMP RGD PMID:31784544 RGD:155882534 NCBI chr 3:49,624,028...49,754,323
Ensembl chr 3:49,624,028...49,754,323 		JBrowse link
G Zyx zyxin involved_in ISO
IEA 		(PMID:24036928)
GO_REF:0000107 		RGD
Ensembl		 PMID:24036928 GO_REF:0000107 NCBI chr 4:72,203,991...72,213,181
Ensembl chr 4:72,204,007...72,213,181 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      cellular component organization or biogenesis 7219
        cellular component organization 6928
          cellular component assembly 3277
            actin filament bundle assembly 191
              actin rod assembly 2
              actomyosin contractile ring actin filament bundle assembly + 0
              contractile actin filament bundle assembly + 123
              negative regulation of actin filament bundle assembly + 43
              parallel actin filament bundle assembly + 8
              positive regulation of actin filament bundle assembly + 73
              regulation of actin filament bundle assembly + 123
Path 2
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      cellular component organization or biogenesis 7219
        cellular component organization 6928
          organelle organization 3741
            cytoskeleton organization 1599
              actin cytoskeleton organization 774
                actin filament organization 502
                  actin filament bundle organization 194
                    actin filament bundle assembly 191
                      actin rod assembly 2
                      actomyosin contractile ring actin filament bundle assembly + 0
                      contractile actin filament bundle assembly + 123
                      negative regulation of actin filament bundle assembly + 43
                      parallel actin filament bundle assembly + 8
                      positive regulation of actin filament bundle assembly + 73
                      regulation of actin filament bundle assembly + 123
paths to the root