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ONTOLOGY REPORT - ANNOTATIONS

Term:sensory perception of light stimulus
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Accession:GO:0050953 term browser browse the term
Definition:The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.


show annotations for term's descendants           Sort by:
sensory perception of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:14740321), (PMID:15671307) RGD PMID:14740321 PMID:15671307 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Cdh23 cadherin-related 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16679490)
MGI:1856228 (PMID:14609561)		 Ensembl
RGD		 PMID:14609561 PMID:16679490 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Clrn1 clarin 1 involved_in ISO
IEA		 (PMID:15521980)
GO_REF:0000107		 RGD
Ensembl		 PMID:15521980 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISO (PMID:10842024) RGD PMID:10842024 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 ISO (PMID:11398101)
MGI:2155422 (PMID:14609561)		 RGD PMID:11398101 PMID:14609561 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO MGI:2657247 (PMID:16723493) RGD PMID:16723493 NCBI chr 1:235,909,583...235,965,435
Ensembl chr 1:235,909,775...235,965,315 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO MGI:2181812 (PMID:16723493) RGD PMID:16723493 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush1g USH1 protein network component sans involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
G Ush2a usherin involved_in ISO
IEA		 (PMID:10090909)
GO_REF:0000107		 RGD
Ensembl		 PMID:10090909 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Whrn whirlin involved_in IEA
ISO		 GO_REF:0000107
(PMID:17171570)		 Ensembl
RGD		 PMID:17171570 GO_REF:0000107 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in ISO (PMID:24413176) RGD PMID:24413176 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223 		JBrowse link
G Best1 bestrophin 1 acts_upstream_of_or_within ISO MGI:3795281 (PMID:16636205) RGD PMID:16636205 NCBI chr 1:206,629,340...206,646,085
Ensembl chr 1:206,629,500...206,646,063 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:152,408,588...152,521,478
Ensembl chr 4:152,408,657...152,521,268 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO MGI:1856936 (PMID:16636205) RGD PMID:16636205 NCBI chr 3:36,906,771...37,169,165
Ensembl chr 3:36,910,427...37,168,944 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:21680557) RGD PMID:21680557 NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023 		JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (PMID:30998843) RGD PMID:30998843 NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:22447858) RGD PMID:22447858 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (PMID:16820008) RGD PMID:16820008 NCBI chr 5:46,991,051...47,002,902
Ensembl chr 5:46,992,946...46,996,570 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17584859)
MGI:2152779 (PMID:18171936)
GO_REF:0000033		 RGD
GO_Central		 PMID:17584859 PMID:18171936 GO_REF:0000033 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:12077706)
MGI:3588845 (PMID:17065522)		 RGD PMID:12077706 PMID:17065522 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17405131)		 UniProt
RGD		 PMID:17405131 GO_REF:0000024 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717 		JBrowse link
G Gucy2f guanylate cyclase 2F involved_in ISO (PMID:17255100) RGD PMID:17255100 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183 		JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (PMID:26420485), (PMID:28053051) RGD PMID:26420485 PMID:28053051 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (PMID:12484775) RGD PMID:12484775 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO
ISS		 (PMID:27889058)
GO_REF:0000024		 RGD
UniProt		 PMID:27889058 GO_REF:0000024 NCBI chr 7:9,373,927...9,380,845
Ensembl chr 7:9,373,927...9,380,597 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3028628 (PMID:14625292)		 GO_Central
RGD		 PMID:14625292 GO_REF:0000033 NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO MGI:102791 (PMID:28053051) RGD PMID:28053051 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:107555 (PMID:21835343) RGD PMID:21835343 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084 		JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO MGI:107556 (PMID:21835343) RGD PMID:21835343 NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:6,412,170...6,424,103
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO MGI:1857860 (PMID:10412977) RGD PMID:10412977 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3046273 (PMID:16775142)		 GO_Central
RGD		 PMID:16775142 GO_REF:0000033 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Arr3 arrestin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:65,699,881...65,712,224
Ensembl chr  X:65,698,699...65,712,153 		JBrowse link
G Arrb1 arrestin, beta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Atf6 activating transcription factor 6 involved_in ISO
IEA		 (PMID:26029869)
GO_REF:0000107		 RGD
Ensembl		 PMID:26029869 GO_REF:0000107 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within ISO (PMID:36125046), (PMID:36700052) RGD PMID:36125046 PMID:36700052 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25541840)		 UniProt
RGD		 PMID:25541840 GO_REF:0000024 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bfsp2 beaded filament structural protein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:104,006,226...104,063,399
Ensembl chr 8:104,006,226...104,063,399 		JBrowse link
G Cabp1 calcium binding protein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:27822497)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:27822497 GO_REF:0000024 GO_REF:0000033 NCBI chr12:41,385,234...41,448,930
Ensembl chr12:41,378,897...41,448,927 		JBrowse link
G Cabp2 calcium binding protein 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:27822497)		 GO_Central
RGD		 PMID:27822497 GO_REF:0000033 NCBI chr 1:201,374,649...201,380,469
Ensembl chr 1:201,375,276...201,380,469 		JBrowse link
G Cabp4 calcium binding protein 4 involved_in ISO
IBA		 (PMID:16960802)
GO_REF:0000033		 RGD
GO_Central		 PMID:16960802 GO_REF:0000033 NCBI chr 1:201,428,671...201,442,950
Ensembl chr 1:201,428,672...201,433,172 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in
acts_upstream_of_or_within		 ISO (PMID:16505158), (PMID:9662399), (PMID:9662400)
MGI:3609549 (PMID:16155113)		 RGD PMID:9662399 PMID:9662400 PMID:16155113 PMID:16505158 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413 		JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429694 (PMID:11980879)		 Ensembl
RGD		 PMID:11980879 GO_REF:0000107 NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106 		JBrowse link
G Cfh complement factor H involved_in
acts_upstream_of_or_within		 ISO (PMID:17921253)
(PMID:17517971), (PMID:25991857)		 RGD PMID:17517971 PMID:17921253 PMID:25991857 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:11344259), (PMID:15456819) RGD PMID:11344259 PMID:15456819 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Cldn19 claudin 19 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Clic5 chloride intracellular channel 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Cln5 CLN5, intracellular trafficking protein acts_upstream_of_or_within ISO MGI:3521802 (PMID:15459177) RGD PMID:15459177 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438
Ensembl chr 2:79,893,548...79,903,438 		JBrowse link
G Cln6 CLN6, transmembrane ER protein acts_upstream_of_or_within ISO MGI:2159328 (PMID:9600738) RGD PMID:9600738 NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (PMID:7668363), (PMID:7683855), (PMID:8125718), (PMID:8282051) RGD PMID:7668363 PMID:7683855 PMID:8125718 PMID:8282051 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Clrn1 clarin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:38,711,726...38,750,942
Ensembl chr 9:38,711,710...38,750,942 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:10573014), (PMID:8872475) RGD PMID:8872475 PMID:10573014 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:17557158) RGD PMID:17557158 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IEA		 (PMID:10486316), (PMID:16752401)
GO_REF:0000107		 RGD
Ensembl		 PMID:10486316 PMID:16752401 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:12915475)
(PMID:15316081)		 RGD PMID:12915475 PMID:15316081 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Cryaa crystallin, alpha A involved_in ISO (PMID:14512969), (PMID:9467006) RGD PMID:9467006 PMID:14512969 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Cryba1 crystallin, beta A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726 		JBrowse link
G Cryba2 crystallin, beta A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,447,250...76,457,968
Ensembl chr 9:76,447,251...76,450,460 		JBrowse link
G Cryba4 crystallin, beta A4 involved_in ISO
IBA		 (PMID:16960806)
GO_REF:0000033		 RGD
GO_Central		 PMID:16960806 GO_REF:0000033 NCBI chr12:44,378,734...44,393,226
Ensembl chr12:44,378,737...44,393,221 		JBrowse link
G Crybb1 crystallin, beta B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:44,369,734...44,383,344
Ensembl chr12:44,369,735...44,383,344 		JBrowse link
G Crybb2 crystallin, beta B2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857342 (PMID:7363969)		 GO_Central
RGD		 PMID:7363969 GO_REF:0000033 NCBI chr12:43,569,747...43,579,671
Ensembl chr12:43,569,747...43,579,671 		JBrowse link
G Crybb3 crystallin, beta B3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:43,557,103...43,562,120
Ensembl chr12:43,557,103...43,562,120 		JBrowse link
G Crybg3 crystallin beta-gamma domain containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:40,749,198...40,861,753
Ensembl chr11:40,749,214...40,861,752 		JBrowse link
G Cryga crystallin, gamma A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,482,176...66,484,638
Ensembl chr 9:66,482,176...66,509,896 		JBrowse link
G Crygb crystallin, gamma B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520 		JBrowse link
G Crygc crystallin, gamma C involved_in IEA
ISO
IBA		 GO_REF:0000107
(PMID:12011157), (PMID:18618005)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12011157 PMID:18618005 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:66,451,591...66,453,626
Ensembl chr 9:66,451,593...66,453,626 		JBrowse link
G Crygd crystallin, gamma D involved_in ISO
IBA		 (PMID:12011157), (PMID:12676897), (PMID:9927684)
GO_REF:0000033		 RGD
GO_Central		 PMID:9927684 PMID:12011157 PMID:12676897 GO_REF:0000033 NCBI chr 9:66,442,057...66,443,668
Ensembl chr 9:66,442,054...66,444,067 		JBrowse link
G Cryge crystallin, gamma E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:66,429,924...66,432,521
Ensembl chr 9:66,429,924...66,433,274 		JBrowse link
G Crygf crystallin, gamma F involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:67,448,265...67,450,429
Ensembl chr 9:67,447,954...67,450,429 		JBrowse link
G Crygn crystallin, gamma N involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,394,015...10,401,542
Ensembl chr 4:10,394,020...10,401,543 		JBrowse link
G Crygs crystallin, gamma S involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:78,207,170...78,212,273
Ensembl chr11:78,207,170...78,212,273 		JBrowse link
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 involved_in ISO (PMID:16055927) RGD PMID:16055927 NCBI chr 2:116,923,272...116,945,312
Ensembl chr 2:116,923,272...116,945,264 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25983245)		 UniProt
RGD		 PMID:25983245 GO_REF:0000024 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403 		JBrowse link
G Elfn1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:36179691) RGD PMID:36179691 NCBI chr12:14,660,049...14,725,709
Ensembl chr12:14,660,083...14,724,580 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861921 (PMID:15728559)		 Ensembl
RGD		 PMID:15728559 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 acts_upstream_of_or_within ISO MGI:2446461 (PMID:12019334) RGD PMID:12019334 NCBI chr 5:47,445,280...47,489,929
Ensembl chr 5:47,452,150...47,489,809 		JBrowse link
G Gja3 gap junction protein, alpha 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:31,181,360...31,206,820
Ensembl chr15:31,181,369...31,206,810 		JBrowse link
G Gjc1 gap junction protein, gamma 1 acts_upstream_of_or_within ISO MGI:2386124 (PMID:15659592) RGD PMID:15659592 NCBI chr10:87,758,192...87,785,443
Ensembl chr10:87,760,528...87,785,867 		JBrowse link
G Gjd2 gap junction protein, delta 2 acts_upstream_of_or_within ISO MGI:2388389 (PMID:15659592) RGD PMID:15659592 NCBI chr 3:100,771,450...100,776,134
Ensembl chr 3:100,772,062...100,775,061 		JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3696673 (PMID:17114051)		 Ensembl
RGD		 PMID:17114051 GO_REF:0000107 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162 		JBrowse link
G Glrb glycine receptor, beta acts_upstream_of_or_within ISO MGI:1856363 (PMID:1338094) RGD PMID:1338094 NCBI chr 2:166,134,616...166,207,498
Ensembl chr 2:166,134,626...166,207,489 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:3707707|MGI:95779 (PMID:16603466), (PMID:30111842) RGD PMID:16603466 PMID:30111842 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845|MGI:5051274|MGI:95778 (PMID:17515894), (PMID:29518352), (PMID:30111842) RGD PMID:17515894 PMID:29518352 PMID:30111842 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:17,162,500...17,212,283
Ensembl chr 4:17,162,490...17,212,283 		JBrowse link
G Gpr179 G protein-coupled receptor 179 involved_in ISO (PMID:22325362)
(PMID:24114537), (PMID:33922602)		 RGD PMID:22325362 PMID:24114537 PMID:33922602 NCBI chr10:82,324,568...82,340,448
Ensembl chr10:82,337,771...82,340,448 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in IEA GO_REF:0000002
GO_REF:0000043		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792 		JBrowse link
G Guca1a guanylate cyclase activator 1A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2664159 (PMID:11493703), (PMID:15173221)		 GO_Central
RGD		 PMID:11493703 PMID:15173221 GO_REF:0000033 NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565 		JBrowse link
G Guca1b guanylate cyclase activator 1B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2664160 (PMID:11493703), (PMID:15173221)		 GO_Central
RGD		 PMID:11493703 PMID:15173221 GO_REF:0000033 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455 		JBrowse link
G Gucy2e guanylate cyclase 2E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182467 (PMID:10908613), (PMID:15359216)		 Ensembl
RGD		 PMID:10908613 PMID:15359216 GO_REF:0000107 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461 		JBrowse link
G Kcnk9 potassium two pore domain channel subfamily K member 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36070380)		 UniProt
RGD		 PMID:36070380 GO_REF:0000024 NCBI chr 7:104,429,186...104,473,924
Ensembl chr 7:104,437,934...104,473,175 		JBrowse link
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1344394 (PMID:19907020)		 Ensembl
RGD		 PMID:19907020 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamc3 laminin subunit gamma 3 acts_upstream_of_or_within ISO MGI:99916 (PMID:19907020) RGD PMID:19907020 NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Lrit1 leucine-rich repeat, Ig-like and transmembrane domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:12,822,076...12,830,003
Ensembl chr16:12,822,076...12,831,772 		JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within ISO MGI:5629558 (PMID:24598786) RGD PMID:24598786 NCBI chr 2:218,337,215...218,360,318
Ensembl chr 2:218,337,819...218,357,307 		JBrowse link
G Mfrp membrane frizzled-related protein acts_upstream_of_or_within ISO MGI:1888705 (PMID:12140190) RGD PMID:12140190 NCBI chr 8:44,445,636...44,450,859
Ensembl chr 8:44,445,697...44,450,859 		JBrowse link
G Mip major intrinsic protein of lens fiber acts_upstream_of_or_within ISO MGI:1861978 (PMID:11773604) RGD PMID:11773604 NCBI chr 7:643,502...653,121
Ensembl chr 7:647,315...654,400 		JBrowse link
G Myo3a myosin IIIA involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (PMID:15316067) RGD PMID:15316067 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
G Myo7a myosin VIIA involved_in
acts_upstream_of_or_within		 ISO (PMID:7870171)
MGI:1857528|MGI:2155417|MGI:2155422|MGI:2155423|MGI:2182918|MGI:3045593 (PMID:11222540), (PMID:15316067)		 RGD PMID:7870171 PMID:11222540 PMID:15316067 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3793713 (PMID:25652399) RGD PMID:25652399 NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846 		JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22937111)		 Ensembl
RGD		 PMID:22937111 GO_REF:0000107 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176560 (PMID:10706625), (PMID:16702404) RGD PMID:10706625 PMID:16702404 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5426260 (PMID:22343139)		 GO_Central
RGD		 PMID:22343139 GO_REF:0000033 NCBI chr17:14,031,151...14,035,897
Ensembl chr17:14,031,153...14,036,189 		JBrowse link
G Nyx nyctalopin acts_upstream_of_or_within ISO MGI:2177945 (PMID:12506099), (PMID:15359216) RGD PMID:12506099 PMID:15359216 NCBI chr  X:9,280,864...9,301,900
Ensembl chr  X:9,280,864...9,301,900 		JBrowse link
G Olfm2 olfactomedin 2 acts_upstream_of_or_within ISO (PMID:25218043) RGD PMID:25218043 NCBI chr 8:19,204,472...19,282,154
Ensembl chr 8:19,204,475...19,282,117 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11017080)		 ParkinsonsUK-UCL
Ensembl
RGD		 PMID:11017080 GO_REF:0000024 GO_REF:0000107 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 involved_in ISO (PMID:15342707) RGD PMID:15342707 NCBI chr 1:78,879,612...78,910,453
Ensembl chr 1:78,880,114...78,901,469
Ensembl chr 1:78,880,114...78,901,469 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:151,905,056...151,925,419
Ensembl chr  X:151,905,096...151,925,388 		JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457 		JBrowse link
G Opn4 opsin 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Opn5 opsin 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:2448714 (PMID:16799054) RGD PMID:16799054 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdc phosducin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:62,297,281...62,371,754
Ensembl chr13:62,358,196...62,371,754 		JBrowse link
G Pdcl phosducin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000043
MGI:3576662|MGI:5516193 (PMID:23637185)		 UniProt
RGD		 PMID:23637185 GO_REF:0000043 NCBI chr 3:21,110,165...21,119,763
Ensembl chr 3:21,110,167...21,119,715
Ensembl chr 3:21,110,167...21,119,715 		JBrowse link
G Pde6c phosphodiesterase 6C involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2657247 (PMID:22937111)		 GO_Central
RGD		 PMID:22937111 GO_REF:0000033 NCBI chr 1:235,909,583...235,965,435
Ensembl chr 1:235,909,775...235,965,315 		JBrowse link
G Pde6d phosphodiesterase 6D involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:87,192,989...87,237,979
Ensembl chr 9:87,192,983...87,237,969 		JBrowse link
G Pde6g phosphodiesterase 6G involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:105,721,502...105,726,150
Ensembl chr10:105,721,682...105,726,719 		JBrowse link
G Pde6h phosphodiesterase 6H involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO MGI:3527191 (PMID:15649713) RGD PMID:15649713 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
G Rcvrn recoverin acts_upstream_of_or_within ISO MGI:3584102 (PMID:15173221) RGD PMID:15173221 NCBI chr10:52,388,706...52,396,454
Ensembl chr10:52,388,706...52,396,453 		JBrowse link
G Rd3 RD3 regulator of GUCY2D involved_in ISO (PMID:8486383) RGD PMID:8486383 NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:12407145) RGD PMID:12407145 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (PMID:15790565) RGD PMID:15790565 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in ISO (PMID:12226107)
(PMID:17032653)		 RGD PMID:12226107 PMID:17032653 NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388 		JBrowse link
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within ISO MGI:3586327 (PMID:15755727) RGD PMID:15755727 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462 		JBrowse link
G Rgr retinal G protein coupled receptor involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223 		JBrowse link
G Rgs9 regulator of G-protein signaling 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:94,195,265...94,270,892
Ensembl chr10:94,197,054...94,270,892 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181812 (PMID:22937111)		 Ensembl
RGD		 PMID:22937111 GO_REF:0000107 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator involved_in
acts_upstream_of_or_within		 ISO (PMID:9399904)
MGI:2386674 (PMID:12651948)		 RGD PMID:9399904 PMID:12651948 NCBI chr  X:12,566,447...12,628,171
Ensembl chr  X:12,566,645...12,747,882 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 acts_upstream_of_or_within ISO MGI:2655714 (PMID:12651948) RGD PMID:12651948 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599 		JBrowse link
G Rs1 retinoschisin 1 involved_in ISO (PMID:19093009) RGD PMID:19093009 NCBI chr  X:33,962,440...33,992,203
Ensembl chr  X:33,963,657...33,992,115 		JBrowse link
G Slc24a1 solute carrier family 24 member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:65,440,842...65,466,001
Ensembl chr 8:65,440,730...65,466,001 		JBrowse link
G Slc38a8 solute carrier family 38, member 8 acts_upstream_of_or_within ISO (PMID:37862028) RGD PMID:37862028 NCBI chr19:47,522,781...47,561,443
Ensembl chr19:47,525,301...47,554,726 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23056253)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23056253 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO GO:0007601 (PMID:12808454) RGD PMID:12808454 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO MGI:4417931 (PMID:23543054) RGD PMID:23543054 NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO (PMID:22920256) RGD PMID:22920256 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO (PMID:16445854) RGD PMID:16445854 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 involved_in ISO (PMID:19878917) RGD PMID:19878917 NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605 		JBrowse link
G Unc119 unc-119 lipid binding chaperone involved_in IEA
IBA		 GO_REF:0000043
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr10:63,237,862...63,243,339
Ensembl chr10:63,237,903...63,243,339 		JBrowse link
G Ush2a usherin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Vsx1 visual system homeobox 1 acts_upstream_of_or_within ISO MGI:3040317 (PMID:15043821) RGD PMID:15043821 NCBI chr 3:139,514,270...139,521,869
Ensembl chr 3:139,514,270...139,521,869 		JBrowse link
G Vsx2 visual system homeobox 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (PMID:9771706), (PMID:9817917) RGD PMID:9771706 PMID:9817917 NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (PMID:13678579), (PMID:20676059) RGD PMID:13678579 PMID:20676059 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 20075
    multicellular organismal process 8904
      system process 3539
        nervous system process 2753
          sensory perception 2077
            sensory perception of light stimulus 149
              detection of light stimulus involved in sensory perception + 24
              visual perception + 145
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