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ONTOLOGY REPORT - ANNOTATIONS


Term:negative chemotaxis
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Accession:GO:0050919 term browser browse the term
Definition:The directed movement of a motile cell or organism towards a lower concentration of a chemical.
Synonyms:exact_synonym: chemoaversion;   chemorepulsion


show annotations for term's descendants           Sort by:
 
negative chemotaxis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 ISO (PMID:23726972) UniProtKB PMID:23726972 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G ITGAV integrin subunit alpha V ISO (PMID:23726972) UniProtKB PMID:23726972 NCBI chr2B:73,880,962...73,972,486
Ensembl chr2B:191,680,655...191,773,028
JBrowse link
G ITGB3 integrin subunit beta 3 ISO (PMID:23726972) UniProtKB PMID:23726972 NCBI chr17:10,134,450...10,194,596 JBrowse link
G NRP2 neuropilin 2 ISO (MGI:MGI:3578029|PMID:15814794)
(MGI:MGI:3613099|PMID:16319111)
MGI PMID:15814794, PMID:16319111 MGI:MGI:3578029, MGI:MGI:3613099 NCBI chr2B:92,911,721...93,027,032
Ensembl chr2B:211,042,324...211,157,547
JBrowse link
G PDGFA platelet derived growth factor subunit A ISO (PMID:9409235) BHF-UCL PMID:9409235 NCBI chr 7:648,722...672,023 JBrowse link
G PLXNA3 plexin A3 ISO (MGI:MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:MGI:2152659 NCBI chr  X:143,900,029...143,915,391
Ensembl chr  X:153,772,700...153,786,167
JBrowse link
G RHOA ras homolog family member A ISO (PMID:23726972) UniProtKB PMID:23726972 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RYK receptor like tyrosine kinase ISO (MGI:MGI:3625635|PMID:16723543) MGI PMID:16723543 MGI:MGI:3625635 NCBI chr 3:131,174,507...131,296,815 JBrowse link
G SEMA3A semaphorin 3A ISO (MGI:MGI:2152659|PMID:11683995) MGI PMID:11683995 MGI:MGI:2152659 NCBI chr 7:75,929,699...76,484,246
Ensembl chr 7:89,590,359...90,004,122
JBrowse link
G SEMA3F semaphorin 3F ISO (MGI:MGI:3613099|PMID:16319111)
(MGI:MGI:2152659|PMID:11683995)
MGI PMID:11683995, PMID:16319111 MGI:MGI:2152659, MGI:MGI:3613099 NCBI chr 3:50,083,733...50,117,518
Ensembl chr 3:51,318,089...51,351,958
JBrowse link
G SLIT1 slit guidance ligand 1 ISO (PMID:11748139)
(MGI:MGI:3626138|PMID:12097499)
UniProtKB
MGI
PMID:11748139, PMID:12097499 MGI:MGI:3626138 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (PMID:11748139)
(MGI:MGI:3042495|PMID:14960623), (MGI:MGI:3626138|PMID:12097499)
(PMID:19005219)
UniProtKB
MGI
PMID:11748139, PMID:12097499, PMID:14960623, PMID:19005219 MGI:MGI:3042495, MGI:MGI:3626138 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SLIT3 slit guidance ligand 3 ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242
JBrowse link
G WNT5A Wnt family member 5A ISO (MGI:MGI:3625635|PMID:16723543) MGI PMID:16723543 MGI:MGI:3625635 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT1 slit guidance ligand 1 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr10:93,618,550...93,806,263
Ensembl chr10:97,119,133...97,303,095
JBrowse link
G SLIT2 slit guidance ligand 2 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SLIT3 slit guidance ligand 3 NOT ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242
JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRG1 neuregulin 1 ISO (MGI:MGI:5320808|PMID:22376909) MGI PMID:22376909 MGI:MGI:5320808 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977
JBrowse link
G NRG3 neuregulin 3 ISO (MGI:MGI:5320808|PMID:22376909) MGI PMID:22376909 MGI:MGI:5320808 NCBI chr10:78,267,693...79,384,895
Ensembl chr10:81,862,036...82,973,334
JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308
JBrowse link
G SLIT2 slit guidance ligand 2 ISO (PMID:15207848) UniProtKB PMID:15207848 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
chemorepulsion of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTN1 netrin 1 ISO (MGI:MGI:5906064|PMID:28483977) UniProt PMID:28483977 MGI:MGI:5906064 NCBI chr17:42,409,797...42,631,930
Ensembl chr17:47,152,225...47,368,134
JBrowse link
G ROBO3 roundabout guidance receptor 3 ISO (MGI:MGI:3834283|PMID:18466743) MGI PMID:18466743 MGI:MGI:3834283 NCBI chr11:119,692,232...119,708,309
Ensembl chr11:123,607,268...123,623,356
JBrowse link
G UNC5C unc-5 netrin receptor C ISO (MGI:MGI:5906064|PMID:28483977) UniProt PMID:28483977 MGI:MGI:5906064 NCBI chr 4:87,527,262...87,921,351
Ensembl chr 4:98,205,554...98,587,888
JBrowse link
chemorepulsion of branchiomotor axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405
JBrowse link
chemorepulsion of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RYK receptor like tyrosine kinase ISO (MGI:MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:23517308 MGI:MGI:5707582 NCBI chr 3:131,174,507...131,296,815 JBrowse link
G WNT5A Wnt family member 5A ISO (MGI:MGI:4866939|PMID:21106844), (MGI:MGI:5707582|PMID:23517308) ParkinsonsUK-UCL PMID:21106844, PMID:23517308 MGI:MGI:4866939, MGI:MGI:5707582 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
induction of negative chemotaxis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 ISO (PMID:10197527) UniProtKB PMID:10197527 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
negative regulation of negative chemotaxis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO1 roundabout guidance receptor 1 ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308
JBrowse link
G ROBO2 roundabout guidance receptor 2 ISO (PMID:11748139) UniProtKB PMID:11748139 NCBI chr 3:76,013,780...77,764,156
Ensembl chr 3:79,030,223...79,632,309
JBrowse link
regulation of negative chemotaxis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA4 plexin A4 ISO (MGI:MGI:3578029|PMID:15814794) MGI PMID:15814794 MGI:MGI:3578029 NCBI chr 7:124,097,028...124,621,504
Ensembl chr 7:136,643,657...136,992,405
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12529
    response to stimulus 6721
      response to chemical 3911
        chemotaxis 477
          negative chemotaxis 22
            chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration 3
            chemorepulsion involved in interneuron migration from the subpallium to the cortex 2
            chemorepulsion involved in postnatal olfactory bulb interneuron migration 2
            chemorepulsion involved in precerebellar neuron migration 0
            chemorepulsion of axon + 6
            germ cell repulsion 0
            negative aerotaxis 0
            negative regulation of negative chemotaxis + 2
            positive regulation of negative chemotaxis + 1
            regulation of negative chemotaxis + 4
            synaptic target inhibition 0
Path 2
Term Annotations click to browse term
  biological_process 12529
    response to stimulus 6721
      response to external stimulus 2504
        taxis 482
          chemotaxis 477
            negative chemotaxis 22
              chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration 3
              chemorepulsion involved in interneuron migration from the subpallium to the cortex 2
              chemorepulsion involved in postnatal olfactory bulb interneuron migration 2
              chemorepulsion involved in precerebellar neuron migration 0
              chemorepulsion of axon + 6
              germ cell repulsion 0
              negative aerotaxis 0
              negative regulation of negative chemotaxis + 2
              positive regulation of negative chemotaxis + 1
              regulation of negative chemotaxis + 4
              synaptic target inhibition 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.