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ONTOLOGY REPORT - ANNOTATIONS


Term:defense response to Gram-positive bacterium
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Accession:GO:0050830 term browser browse the term
Definition:Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.
Synonyms:exact_synonym: defence response to Gram-positive bacteria;   defence response to Gram-positive bacterium;   defense response to Gram-positive bacteria
 related_synonym: Gram-positive antibacterial peptide activity


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defense response to Gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015743.1 ISS GO_REF:0000024 AgBase GO_REF:0000024 Ensembl chr14:73,674,753...73,675,382 JBrowse link
G AABR07067422.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:44,576,918...44,586,358 JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO
IEA
MGI:MGI:2180086 (MGI:MGI:1930064|PMID:11168643)
GO_REF:0000107
RGD
Ensembl
PMID:11168643 GO_REF:0000107, MGI:MGI:1930064 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO
IEA
(PMID:16034137)
GO_REF:0000107
RGD
Ensembl
PMID:16034137 GO_REF:0000107 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Adm adrenomedullin ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Ang angiogenin ISO (PMID:12548285)
(MGI:MGI:2652649|PMID:12548285)
RGD PMID:12548285 MGI:MGI:2652649 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,103,688...28,121,494
Ensembl chr15:28,103,703...28,104,206
JBrowse link
G App amyloid beta precursor protein IDA
ISO
PMID:20209079
(PMID:20209079)
RGD PMID:20209079, PMID:20209079 RGD:10400853 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G B2m beta-2 microglobulin ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G C5ar1 complement C5a receptor 1 ISO (MGI:MGI:3814295|PMID:17114491) RGD PMID:17114491 MGI:MGI:3814295 NCBI chr 1:78,186,777...78,195,132
Ensembl chr 1:78,186,776...78,195,328
JBrowse link
G Camp cathelicidin antimicrobial peptide IMP
IBA
ISO
PMID:21873635
(PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:17012259), (PMID:20209079), (PMID:23537644), (PMID:7529412), (PMID:9182550)
MGI:MGI:2182791 (MGI:MGI:3611523|PMID:16177355), (MGI:MGI:3770082|PMID:17012259)
RGD PMID:7529412, PMID:9182550, PMID:12759353, PMID:12860195, PMID:14978112, PMID:16177355, PMID:17012259, PMID:20209079, PMID:23537644, PMID:17142779, PMID:21873635 MGI:MGI:3611523, MGI:MGI:3770082, RGD:2316243, RGD:13792537 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Card9 caspase recruitment domain family, member 9 ISO MGI:MGI:3698412 (MGI:MGI:3697751|PMID:17187069) RGD PMID:17187069 MGI:MGI:3697751 NCBI chr 3:3,798,346...3,806,841
Ensembl chr 3:3,798,347...3,806,713
JBrowse link
G Cd36 CD36 molecule ISO MGI:MGI:2447190|MGI:MGI:3573941 (MGI:MGI:3528769|PMID:15690042), (MGI:MGI:3587138|PMID:16061696) RGD PMID:15690042, PMID:16061696 MGI:MGI:3528769, MGI:MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Chga chromogranin A IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15723172)
Ensembl
UniProt
RGD
PMID:15723172 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:126,434,226...126,445,569
Ensembl chr 6:126,434,226...126,445,568
JBrowse link
G Ctsg cathepsin G ISO MGI:MGI:2182170 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Defa10 defensin alpha 10 ISO
IBA
MGI:MGI:94880|MGI:MGI:94882|MGI:MGI:99582 (MGI:MGI:3698376|PMID:11248802)
PMID:21873635
RGD PMID:11248802, PMID:21873635 MGI:MGI:3698376, RGD:13792537 NCBI chr16:75,498,236...75,499,012
Ensembl chr16:75,498,236...75,499,012
JBrowse link
G Defa11 defensin alpha 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,517,421...75,519,605
Ensembl chr16:75,517,505...75,518,336
JBrowse link
G Defa24 defensin alpha 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,345,086...75,346,122
Ensembl chr16:75,345,086...75,346,122
JBrowse link
G Defa5 defensin alpha 5 ISO
IBA
(PMID:21861459)
PMID:21873635
RGD PMID:21861459, PMID:21873635 RGD:13792537 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defa6 defensin alpha 6 ISO
IBA
MGI:MGI:94880|MGI:MGI:94882|MGI:MGI:94883 (MGI:MGI:3698376|PMID:11248802)
PMID:21873635
RGD PMID:11248802, PMID:21873635 MGI:MGI:3698376, RGD:13792537 NCBI chr16:75,400,781...75,401,655
Ensembl chr16:75,400,781...75,401,655
JBrowse link
G Defa8 defensin alpha 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,428,675...75,429,568
Ensembl chr16:75,428,675...75,429,568
JBrowse link
G Defa9 defensin alpha 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,465,710...75,466,604
Ensembl chr16:75,465,710...75,466,606
JBrowse link
G Defal1 defensin alpha-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,366,925...75,367,985
Ensembl chr16:75,366,929...75,367,906
JBrowse link
G Defb1 defensin beta 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:12860195), (PMID:25122636)
UniProt
RGD
PMID:12860195, PMID:25122636, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr16:75,294,385...75,309,127
Ensembl chr16:75,294,376...75,309,176
JBrowse link
G Defb10 defensin beta 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,198,178...75,208,230
Ensembl chr16:75,198,178...75,208,230
JBrowse link
G Defb11 defensin beta 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,146,200...75,156,555
Ensembl chr16:75,149,437...75,156,321
JBrowse link
G Defb13 defensin beta 13 NOT ISO RGD DOI:10.1016/j.ijms.2006.01.054 NCBI chr16:75,027,131...75,028,977
Ensembl chr16:75,027,131...75,028,977
JBrowse link
G Defb14 defensin beta 14 ISO (PMID:11085990), (PMID:15625724) RGD PMID:11085990, PMID:15625724 NCBI chr16:75,647,523...75,650,913
Ensembl chr16:75,647,680...75,648,538
JBrowse link
G Defb15 defensin beta 15 ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
JBrowse link
G Defb2 defensin beta 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,227,468...75,241,303
Ensembl chr16:75,227,468...75,241,303
JBrowse link
G Defb20 defensin beta 20 ISO (PMID:15625724) RGD PMID:15625724 NCBI chr 3:147,952,879...147,955,502
Ensembl chr 3:147,952,879...147,955,502
JBrowse link
G Defb24 defensin beta 24 ISO
IBA
(PMID:24449502)
PMID:21873635
RGD PMID:24449502, PMID:21873635 RGD:13792537 NCBI chr 3:148,051,364...148,057,497
Ensembl chr 3:148,051,263...148,057,523
JBrowse link
G Defb37 defensin beta 37 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,083,173...75,094,963
Ensembl chr16:75,083,172...75,095,108
JBrowse link
G Defb38 defensin beta 38 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,058,572...75,061,804
Ensembl chr16:75,058,572...75,061,804
JBrowse link
G Defb39 defensin beta 39 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,042,516...75,046,320
Ensembl chr16:75,042,516...75,046,320
JBrowse link
G Defb4 defensin beta 4 ISO
ISS
(MGI:MGI:5784982|PMID:20068036)
(PMID:15625724), (PMID:20068036)
GO_REF:0000024
RGD
UniProt
PMID:15625724, PMID:20068036 GO_REF:0000024, MGI:MGI:5784982 NCBI chr16:75,634,598...75,637,789
Ensembl chr16:75,634,598...75,637,789
JBrowse link
G Defb40 defensin beta 40 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,702,347...75,705,489
Ensembl chr16:75,702,347...75,705,489
JBrowse link
G Defb5 defensin beta 5 ISO (PMID:15625724), (PMID:20068036) RGD PMID:15625724, PMID:20068036 NCBI chr16:75,597,323...75,599,483
Ensembl chr16:75,589,530...75,599,534
JBrowse link
G Defb9 defensin beta 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,176,307...75,179,090
Ensembl chr16:75,176,247...75,179,089
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 ISO
ISS
(MGI:MGI:2670828|PMID:12884308)
(PMID:11007786), (PMID:19189310)
GO_REF:0000024
RGD
UniProt
PMID:11007786, PMID:12884308, PMID:19189310 GO_REF:0000024, MGI:MGI:2670828 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Drosha drosha ribonuclease III ISO (PMID:20180804) RGD PMID:20180804 NCBI chr 2:62,887,267...63,000,307
Ensembl chr 2:62,887,267...62,999,572
JBrowse link
G Epha2 Eph receptor A2 ISO MGI:MGI:3040415 (MGI:MGI:3847147|PMID:19443703) RGD PMID:19443703 MGI:MGI:3847147 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion ISO (PMID:12860195)
(MGI:MGI:5897760|PMID:10496312)
RGD PMID:10496312, PMID:12860195 MGI:MGI:5897760 NCBI chr 1:221,420,312...221,421,827
Ensembl chr 1:221,420,271...221,421,842
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO
ISS
MGI:MGI:96052 (MGI:MGI:65050|PMID:8125254)
GO_REF:0000024
RGD
UniProt
PMID:8125254 GO_REF:0000024, MGI:MGI:65050 NCBI chr 5:151,172,189...151,199,746
Ensembl chr 5:151,172,206...151,199,745
JBrowse link
G Gbp1 guanylate binding protein 1 ISO (MGI:MGI:4412460|PMID:18025219), (MGI:MGI:5007562|PMID:21551061) RGD PMID:18025219, PMID:21551061 MGI:MGI:4412460, MGI:MGI:5007562 NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570
JBrowse link
G Gbp2 guanylate binding protein 2 ISO
IBA
IEA
(MGI:MGI:4412460|PMID:18025219)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18025219, PMID:21873635 GO_REF:0000107, MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784
JBrowse link
G Gbp4 guanylate binding protein 4 IBA
ISO
PMID:21873635
(MGI:MGI:4412460|PMID:18025219)
RGD PMID:18025219, PMID:21873635 MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,249,232...248,263,104
Ensembl chr 2:248,249,468...248,263,168
JBrowse link
G Gbp6 guanylate binding protein family member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:5,927,568...5,954,923
Ensembl chr14:5,928,737...5,945,321
JBrowse link
G Gsdmd gasdermin D ISO (MGI:MGI:5796057|PMID:27383986) RGD PMID:27383986 MGI:MGI:5796057 NCBI chr 7:116,889,147...116,894,134
Ensembl chr 7:116,889,572...116,894,134
JBrowse link
G H2bc12 H2B clustered histone 12 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,527,421...44,527,801
Ensembl chr17:44,527,421...44,527,801
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (PMID:11034317), (PMID:11113131) RGD PMID:11034317, PMID:11113131 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 ISO (MGI:MGI:5568873|PMID:24567532) RGD PMID:24567532 MGI:MGI:5568873 NCBI chr10:31,561,838...31,590,624
Ensembl chr10:31,561,895...31,588,943
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO MGI:MGI:95527 (MGI:MGI:65050|PMID:8125254) RGD PMID:8125254 MGI:MGI:65050 NCBI chr 3:148,579,917...148,623,026
Ensembl chr 3:148,579,920...148,623,033
JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,833,924...44,834,305
Ensembl chr17:44,833,924...44,834,305
JBrowse link
G Hist1h2bl histone cluster 1 H2B family member l ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:44,748,445...44,748,910
Ensembl chr17:44,748,482...44,748,862
JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:43,679,925...43,689,311
Ensembl chr17:43,679,925...43,689,311
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E ISO (PMID:11859126), (PMID:12860195) RGD PMID:11859126, PMID:12860195 NCBI chr 2:198,360,837...198,363,399
Ensembl chr 2:198,360,998...198,361,378
JBrowse link
G Hmgb2 high mobility group box 2 ISO
ISS
(PMID:23877675)
GO_REF:0000024
RGD
AgBase
PMID:23877675 GO_REF:0000024 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Il12a interleukin 12A ISO
IEA
(PMID:1357073)
GO_REF:0000107
RGD
Ensembl
PMID:1357073 GO_REF:0000107 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il17a interleukin 17A ISO
IEA
(MGI:MGI:3828868|PMID:19144317), (MGI:MGI:4459373|PMID:20364087)
GO_REF:0000107
RGD
Ensembl
PMID:19144317, PMID:20364087 GO_REF:0000107, MGI:MGI:3828868, MGI:MGI:4459373 NCBI chr 9:26,841,299...26,844,786
Ensembl chr 9:26,841,299...26,844,786
JBrowse link
G Il17f interleukin 17F ISO
IEA
(MGI:MGI:3828868|PMID:19144317)
GO_REF:0000107
RGD
Ensembl
PMID:19144317 GO_REF:0000107, MGI:MGI:3828868 NCBI chr 9:26,885,702...26,897,219
Ensembl chr 9:26,885,708...26,897,219
JBrowse link
G Il27ra interleukin 27 receptor subunit alpha ISO MGI:MGI:3525439 (MGI:MGI:1926579|PMID:11057672) RGD PMID:11057672 MGI:MGI:1926579 NCBI chr19:25,151,835...25,163,995
Ensembl chr19:25,149,897...25,164,086
JBrowse link
G Il7r interleukin 7 receptor ISO (MGI:MGI:4459373|PMID:20364087) RGD PMID:20364087 MGI:MGI:4459373
G Kb15 type II keratin Kb15 ISO (MGI:MGI:5466437|PMID:23006328) RGD PMID:23006328 MGI:MGI:5466437 NCBI chr 7:143,208,034...143,217,771
Ensembl chr 7:143,208,527...143,217,535
JBrowse link
G Klrk1 killer cell lectin like receptor K1 ISO
IEA
(MGI:MGI:3028810|PMID:14764662)
GO_REF:0000107
RGD
Ensembl
PMID:14764662 GO_REF:0000107, MGI:MGI:3028810 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
G Lbp lipopolysaccharide binding protein ISO
IBA
IEA
(PMID:12932360)
PMID:21873635
GO_REF:0000107
(MGI:MGI:3807766|PMID:12932360)
RGD
Ensembl
PMID:12932360, PMID:21873635 GO_REF:0000107, MGI:MGI:3807766, RGD:13792537 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Lce3e late cornified envelope 3E ISO (PMID:28634035) RGD PMID:28634035 NCBI chr 2:193,275,472...193,276,006
Ensembl chr 2:193,275,507...193,275,803
JBrowse link
G LOC100364500 RT1 class I, locus CE11-like ISO (PMID:25631937) RGD PMID:25631937 NCBI chr20:2,704,153...2,707,111
Ensembl chr20:2,704,148...2,707,120
JBrowse link
G LOC100910070 lysozyme g-like protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:44,605,306...44,611,810
Ensembl chr 9:44,605,304...44,617,210
JBrowse link
G LOC103690086 uncharacterized LOC103690086 ISO (MGI:MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:MGI:4412460 NCBI chr14:5,642,357...5,646,406 JBrowse link
G LOC103693222 lysozyme g-like protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:44,574,626...44,590,028
Ensembl chr 9:44,499,800...44,509,201
JBrowse link
G LOC103694852 ribonuclease K6-like ISO
IBA
(PMID:16940129)
PMID:21873635
RGD PMID:16940129, PMID:21873635 RGD:13792537 Ensembl chr15:28,081,004...28,081,465 JBrowse link
G LOC290595 hypothetical gene supported by AF152002 ISO (PMID:25585381) RGD PMID:25585381 NCBI chr16:14,352,998...14,360,604
Ensembl chr16:14,353,459...14,360,555
JBrowse link
G LOC685067 similar to guanylate binding protein family, member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:248,215,324...248,241,278
Ensembl chr 2:248,219,428...248,239,899
JBrowse link
G Lta lymphotoxin alpha ISO MGI:MGI:104798 (MGI:MGI:3690573|PMID:9834074) RGD PMID:9834074 MGI:MGI:3690573 NCBI chr20:4,851,889...4,854,677
Ensembl chr20:4,852,496...4,854,677
JBrowse link
G Ltf lactotransferrin ISO (PMID:9596699) RGD PMID:9596699 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Lyc2 lysozyme C type 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:60,316,045...60,323,610
Ensembl chr 7:60,316,045...60,323,609
JBrowse link
G Lyg1 lysozyme G1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:44,527,596...44,539,320
Ensembl chr 9:44,527,742...44,534,041
JBrowse link
G Lyg2 lysozyme G2 ISO
IBA
(PMID:21093056)
PMID:21873635
RGD PMID:21093056, PMID:21873635 RGD:13792537 NCBI chr 9:44,497,508...44,509,921
Ensembl chr 9:44,499,800...44,509,201
JBrowse link
G Lyz2 lysozyme 2 IMP
IBA
ISO
PMID:21873635
(MGI:MGI:3042773|PMID:14977423)
(PMID:21093056)
RGD PMID:14977423, PMID:21093056, PMID:2840982, PMID:21873635 MGI:MGI:3042773, RGD:1599862, RGD:13792537 NCBI chr 7:60,335,968...60,341,264
Ensembl chr 7:60,335,969...60,341,264
JBrowse link
G Mbl1 mannose binding lectin 1 ISO MGI:MGI:96924 (MGI:MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:MGI:3577322 NCBI chr16:18,736,154...18,742,193
Ensembl chr16:18,736,154...18,742,193
JBrowse link
G Mbl2 mannose binding lectin 2 ISO (PMID:15148336)
MGI:MGI:96923 (MGI:MGI:3577322|PMID:15148336)
RGD PMID:15148336 MGI:MGI:3577322 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO (MGI:MGI:3698376|PMID:11248802) RGD PMID:11248802 MGI:MGI:3698376 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
G Mpeg1 macrophage expressed 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6294210|PMID:23257510)
(PMID:30609079)
UniProt
RGD
PMID:23257510, PMID:30609079 GO_REF:0000024, MGI:MGI:6294210 NCBI chr 1:228,724,559...228,729,054
Ensembl chr 1:228,724,900...228,727,160
JBrowse link
G Mpo myeloperoxidase NOT ISO MGI:MGI:2176344 (MGI:MGI:1333719|PMID:10085024) RGD PMID:10085024 MGI:MGI:1333719 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260
JBrowse link
G Mr1 major histocompatibility complex, class I-related ISO
IEA
(PMID:27527800)
GO_REF:0000107
RGD
Ensembl
PMID:27527800 GO_REF:0000107 NCBI chr13:72,771,992...72,789,861
Ensembl chr13:72,771,984...72,789,841
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
MGI:MGI:2385681 (MGI:MGI:3619313|PMID:11067888), (MGI:MGI:3760234|PMID:17635956)
UniProt
RGD
PMID:11067888, PMID:17635956, PMID:21873635 GO_REF:0000024, MGI:MGI:3619313, MGI:MGI:3760234, RGD:13792537 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Myo1f myosin IF ISO MGI:MGI:3664779 (MGI:MGI:3664353|PMID:17023661) RGD PMID:17023661 MGI:MGI:3664353 NCBI chr 7:18,440,742...18,491,448
Ensembl chr 7:18,440,742...18,491,448
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:3576788 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 ISO (MGI:MGI:5790524|PMID:27374331) RGD PMID:27374331 MGI:MGI:5790524 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 ISO MGI:MGI:2429397|MGI:MGI:2674231 (MGI:MGI:3775161|PMID:18261938) RGD PMID:18261938 MGI:MGI:3775161 NCBI chr 4:85,123,965...85,175,206
Ensembl chr 4:85,123,960...85,174,951
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:1341839|MGI:MGI:3529594 (MGI:MGI:3528786|PMID:15692051), (MGI:MGI:3775161|PMID:18261938), (MGI:MGI:3839525|PMID:19139201) RGD PMID:15692051, PMID:18261938, PMID:19139201 MGI:MGI:3528786, MGI:MGI:3775161, MGI:MGI:3839525 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Np4 defensin NP-4 precursor ISO
IBA
(PMID:2500436)
PMID:21873635
RGD PMID:2500436, PMID:21873635 RGD:13792537 NCBI chr16:75,478,548...75,481,146
Ensembl chr16:75,414,786...75,481,115
JBrowse link
G Npy neuropeptide Y ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:79,557,856...79,565,059
Ensembl chr 4:79,557,854...79,565,097
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:MGI:3606250 (MGI:MGI:3699774|PMID:11544318) RGD PMID:11544318 MGI:MGI:3699774 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11461926), (PMID:16354652)
Ensembl
RGD
PMID:11461926, PMID:16354652, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:79,790,879...79,796,064
Ensembl chr 1:79,790,705...79,796,111
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 ISO
IBA
(PMID:11461926)
PMID:21873635
RGD PMID:11461926, PMID:21873635 RGD:13792537 NCBI chr 7:14,426,481...14,435,987
Ensembl chr 7:14,429,701...14,435,967
JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 ISO (PMID:11461926), (PMID:16354652) RGD PMID:11461926, PMID:16354652 NCBI chr 2:191,903,626...192,264,872
Ensembl chr 2:192,253,629...192,264,840
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 ISO (PMID:11461926), (PMID:16354652) RGD PMID:11461926, PMID:16354652 NCBI chr 2:190,125,655...190,204,230
Ensembl chr 2:190,125,693...190,148,265
JBrowse link
G Pla2g1b phospholipase A2 group IB ISO (PMID:12860195) RGD PMID:12860195 NCBI chr12:46,879,346...46,890,234
Ensembl chr12:46,879,343...46,889,082
JBrowse link
G Pla2g2a phospholipase A2 group IIA ISS
ISO
GO_REF:0000024
(PMID:10358193)
UniProt
RGD
PMID:10358193 GO_REF:0000024 NCBI chr 5:157,282,650...157,285,295
Ensembl chr 5:157,282,669...157,285,328
JBrowse link
G Pld1 phospholipase D1 ISO (MGI:MGI:3699774|PMID:11544318) RGD PMID:11544318 MGI:MGI:3699774 NCBI chr 2:113,651,967...113,849,403
Ensembl chr 2:113,652,348...113,849,403
JBrowse link
G Ppp1r11 protein phosphatase 1, regulatory (inhibitor) subunit 11 ISO
ISS
(MGI:MGI:6094454|PMID:27805901)
GO_REF:0000024
RGD
UniProt
PMID:27805901 GO_REF:0000024, MGI:MGI:6094454 NCBI chr20:2,094,931...2,098,438
Ensembl chr20:2,094,931...2,098,433
JBrowse link
G Rarres2 retinoic acid receptor responder 2 ISO (PMID:23527010) RGD PMID:23527010 NCBI chr 4:78,205,809...78,208,956
Ensembl chr 4:78,205,812...78,208,767
JBrowse link
G RatNP-3b defensin RatNP-3 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,528,348...75,530,511
Ensembl chr16:75,497,832...75,530,517
JBrowse link
G Reg3b regenerating family member 3 beta IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5488881|PMID:21694778)
Ensembl
UniProt
RGD
PMID:21694778 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5488881 NCBI chr 4:109,467,272...109,470,510
Ensembl chr 4:109,467,272...109,470,510
JBrowse link
G Reg3g regenerating family member 3 gamma ISS
ISO
GO_REF:0000024
(MGI:MGI:3760234|PMID:17635956), (MGI:MGI:5488544|PMID:23401489), (MGI:MGI:5897756|PMID:16931762)
UniProt
RGD
PMID:16931762, PMID:17635956, PMID:23401489 GO_REF:0000024, MGI:MGI:3760234, MGI:MGI:5488544, MGI:MGI:5897756 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
G RGD1306474 similar to RIKEN cDNA 9530003J23 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:60,305,006...60,309,878
Ensembl chr 7:60,305,006...60,309,878
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:20,416,735...20,417,959
Ensembl chr 1:20,417,008...20,417,637
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:73,674,647...73,675,638 JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 ISO MGI:MGI:2446070|MGI:MGI:2660793 (MGI:MGI:2176422|PMID:11894098), (MGI:MGI:2176424|PMID:11894097), (MGI:MGI:3775161|PMID:18261938) RGD PMID:11894097, PMID:11894098, PMID:18261938 MGI:MGI:2176422, MGI:MGI:2176424, MGI:MGI:3775161 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Rnase2 ribonuclease A family member 2 NOT ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:28,154,482...28,155,291
Ensembl chr15:28,154,482...28,155,291
JBrowse link
G Rnase3 ribonuclease A family member 3 ISO (PMID:12860195), (PMID:23992292) RGD PMID:12860195, PMID:23992292 NCBI chr15:28,216,744...28,217,614
Ensembl chr15:28,216,744...28,217,614
JBrowse link
G Rnase6 ribonuclease A family member k6 ISO
IBA
(PMID:25075772)
PMID:21873635
(MGI:MGI:5902674|PMID:25075772)
RGD PMID:25075772, PMID:21873635 MGI:MGI:5902674, RGD:13792537 NCBI chr15:28,080,307...28,084,269
Ensembl chr15:28,081,004...28,081,465
JBrowse link
G Romo1 reactive oxygen species modulator 1 ISO (PMID:22083756) RGD PMID:22083756 NCBI chr 3:151,688,213...151,689,813
Ensembl chr 3:151,688,454...151,689,711
JBrowse link
G Rpl39 ribosomal protein L39 ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:123,705,241...123,707,257
Ensembl chr  X:123,705,235...123,708,211
JBrowse link
G RT1-S3 RT1 class Ib, locus S3 ISO (PMID:25631937) RGD PMID:25631937 NCBI chr20:3,176,124...3,180,825
Ensembl chr20:3,176,107...3,179,818
JBrowse link
G Scd stearoyl-CoA desaturase ISO MGI:MGI:3620028 (MGI:MGI:3588475|PMID:16040962) RGD PMID:16040962 MGI:MGI:3588475 NCBI chr 1:264,159,966...264,173,061
Ensembl chr 1:264,160,129...264,172,729
JBrowse link
G Seh1l SEH1-like nucleoporin ISO (MGI:MGI:4830383|PMID:20824097) RGD PMID:20824097 MGI:MGI:4830383 NCBI chr18:63,545,150...63,568,101 JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains ISO (MGI:MGI:4939978|PMID:21217009) RGD PMID:21217009 MGI:MGI:4939978 NCBI chr 1:72,443,750...72,462,293
Ensembl chr 1:72,443,758...72,461,547
JBrowse link
G Stab2 stabilin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:11829752)
Ensembl
UniProt
RGD
PMID:11829752 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:27,369,853...27,552,078
Ensembl chr 7:27,369,853...27,552,078
JBrowse link
G Tac1 tachykinin, precursor 1 ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tbk1 TANK-binding kinase 1 ISO MGI:MGI:3046789 (MGI:MGI:3530402|PMID:15661922) RGD PMID:15661922 MGI:MGI:3530402 NCBI chr 7:63,655,247...63,687,978
Ensembl chr 7:63,655,247...63,687,978
JBrowse link
G Tirap TIR domain containing adaptor protein ISO MGI:MGI:3573942 (MGI:MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:MGI:3528769 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Tlr2 toll-like receptor 2 ISO (PMID:11521063)
MGI:MGI:2178675|MGI:MGI:2674036 (MGI:MGI:3528769|PMID:15690042), (MGI:MGI:3619313|PMID:11067888), (MGI:MGI:3839525|PMID:19139201)
RGD PMID:11067888, PMID:11521063, PMID:15690042, PMID:19139201 MGI:MGI:3528769, MGI:MGI:3619313, MGI:MGI:3839525 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tnf tumor necrosis factor ISO MGI:MGI:104797 (MGI:MGI:3690573|PMID:9834074) RGD PMID:9834074 MGI:MGI:3690573 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfaip8 TNF alpha induced protein 8 ISO (MGI:MGI:4830383|PMID:20824097) RGD PMID:20824097 MGI:MGI:4830383 NCBI chr18:44,664,310...44,779,914
Ensembl chr18:44,716,226...44,779,914
JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 ISO
IBA
MGI:MGI:3582550 (MGI:MGI:5432939|PMID:22801499)
PMID:21873635
RGD PMID:22801499, PMID:21873635 MGI:MGI:5432939, RGD:13792537 NCBI chr 5:172,328,259...172,337,221
Ensembl chr 5:172,328,262...172,335,892
JBrowse link
G Tnfsf8 TNF superfamily member 8 ISO MGI:MGI:3054968 (MGI:MGI:3700858|PMID:16177108) RGD PMID:16177108 MGI:MGI:3700858 NCBI chr 5:79,664,779...79,691,547
Ensembl chr 5:79,664,765...79,691,258
JBrowse link
G Vip vasoactive intestinal peptide ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Zg16 zymogen granule protein 16 ISO MGI:MGI:3529206 (MGI:MGI:5824939|PMID:27849619) RGD PMID:27849619 MGI:MGI:5824939 NCBI chr 1:198,483,800...198,486,157
Ensembl chr 1:198,483,805...198,486,157
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G ISO
IEA
MGI:MGI:2182170 (MGI:MGI:4353632|PMID:11907569)
GO_REF:0000107
RGD
Ensembl
PMID:11907569 GO_REF:0000107, MGI:MGI:4353632 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:3576788 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO MGI:MGI:3529594 (MGI:MGI:3528786|PMID:15692051) RGD PMID:15692051 MGI:MGI:3528786 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    interspecies interaction between organisms 1919
      response to other organism 1708
        defense response to other organism 1119
          defense response to bacterium 429
            defense response to Gram-positive bacterium 132
              biosynthetic process of antibacterial peptides active against Gram-positive bacteria + 1
              neutrophil-mediated killing of gram-positive bacterium + 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to external stimulus 3204
        response to external biotic stimulus 1712
          response to other organism 1708
            response to bacterium 1043
              defense response to bacterium 429
                defense response to Gram-positive bacterium 132
                  biosynthetic process of antibacterial peptides active against Gram-positive bacteria + 1
                  neutrophil-mediated killing of gram-positive bacterium + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.