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ONTOLOGY REPORT - ANNOTATIONS

Term:defense response to Gram-negative bacterium
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Accession:GO:0050829 term browser browse the term
Definition:Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism.
Synonyms:exact_synonym: defence response to Gram-negative bacteria;   defence response to Gram-negative bacterium;   defense response to Gram-negative bacteria
 related_synonym: Gram-negative antibacterial peptide activity


show annotations for term's descendants           Sort by:
defense response to Gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO
IEA		 (MGI:4939876|PMID:21245295)
GO_REF:0000107		 RGD
Ensembl		 PMID:21245295 GO_REF:0000107 MGI:4939876 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902 		JBrowse link
G App amyloid beta precursor protein involved_in IDA PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Aqp1 aquaporin 1 involved_in ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)		 RGD PMID:18665841 MGI:4457239 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221 		JBrowse link
G Bpifc BPI fold containing family C involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:17,848,787...17,905,993
Ensembl chr 7:17,861,007...17,905,919 		JBrowse link
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in		 IMP
ISO
IBA		 (PMID:9148921)
GO_REF:0000033
(MGI:3770082|PMID:17012259)		 RGD
GO_Central		 PMID:9148921 PMID:17012259 PMID:19879657 GO_REF:0000033 MGI:3770082, RGD:2316237 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543 		JBrowse link
G Casp1 caspase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6391726|PMID:29887864)		 Ensembl
RGD		 PMID:29887864 GO_REF:0000107 MGI:6391726 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383 		JBrowse link
G Cd160 CD160 molecule acts_upstream_of_or_within ISO (PMID:22801499) RGD PMID:22801499 NCBI chr 2:184,340,820...184,383,421
Ensembl chr 2:184,340,599...184,375,834 		JBrowse link
G Cd4 Cd4 molecule acts_upstream_of_or_within ISO MGI:1857281 (PMID:14688352) RGD PMID:14688352 NCBI chr 4:157,668,878...157,695,366 JBrowse link
G Chga chromogranin A involved_in ISO
ISS
IEA		 (PMID:15723172)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:15723172 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:121,696,051...121,707,399
Ensembl chr 6:121,696,051...121,707,398 		JBrowse link
G Cst11 cystatin 11 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:12072414)		 UniProt
GO_Central
RGD		 PMID:12072414 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:136,211,414...136,214,138
Ensembl chr 3:136,211,414...136,214,138 		JBrowse link
G Ctsg cathepsin G involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:2116408)		 UniProt
Ensembl
RGD		 PMID:2116408 GO_REF:0000024 GO_REF:0000107 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353 		JBrowse link
G Defa10 defensin alpha 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,513,892...70,516,234
Ensembl chr16:70,514,248...70,515,024 		JBrowse link
G Defa11 defensin alpha 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,533,436...70,535,592
Ensembl chr16:70,533,436...70,535,604 		JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,349,550...70,350,582
Ensembl chr16:70,349,567...70,350,603 		JBrowse link
G Defa5 defensin alpha 5 involved_in ISO
IBA		 (PMID:12660734), (PMID:19589339), (PMID:22573326), (PMID:25354318), (PMID:30808760)
GO_REF:0000033		 RGD
GO_Central		 PMID:12660734 PMID:19589339 PMID:22573326 PMID:25354318 PMID:30808760 GO_REF:0000033 NCBI chr16:70,342,530...70,344,854
Ensembl chr16:70,342,530...70,344,836 		JBrowse link
G Defa5-ps2 defensin alpha 5, pseudogene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:70,391,781...70,392,695
Ensembl chr16:70,391,781...70,392,695
Ensembl chr16:70,391,781...70,392,695 		JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,405,223...70,406,237
Ensembl chr16:70,405,268...70,406,142 		JBrowse link
G Defa7 defensin alpha 7 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:70,419,152...70,430,555
Ensembl chr16:70,419,277...70,420,046 		JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,433,121...70,434,154
Ensembl chr16:70,433,166...70,434,059 		JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,481,813...70,482,803
Ensembl chr16:70,481,821...70,482,717 		JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,371,492...70,372,481
Ensembl chr16:70,371,518...70,372,353 		JBrowse link
G Defb1 defensin beta 1 involved_in ISO
IBA
ISS		 (PMID:25122636)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:25122636 GO_REF:0000024 GO_REF:0000033 NCBI chr16:70,298,862...70,313,604
Ensembl chr16:70,298,863...70,313,604 		JBrowse link
G Defb10 defensin beta 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,202,599...70,212,734
Ensembl chr16:70,202,655...70,212,707 		JBrowse link
G Defb105a defensin beta 105A acts_upstream_of_or_within ISO (PMID:12193721) RGD PMID:12193721 NCBI chr16:70,136,218...70,138,645
Ensembl chr16:70,725,701...70,728,143
Ensembl chr16:70,725,701...70,728,143 		JBrowse link
G Defb11 defensin beta 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,156,044...70,163,062
Ensembl chr16:70,156,141...70,163,068 		JBrowse link
G Defb14 defensin beta 14 involved_in ISO (PMID:15625724) RGD PMID:15625724 NCBI chr16:70,663,443...70,668,473
Ensembl chr16:70,663,333...70,666,540 		JBrowse link
G Defb2 defensin beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,231,870...70,245,817
Ensembl chr16:70,231,945...70,245,784 		JBrowse link
G Defb20 defensin beta 20 involved_in ISO (PMID:15625724) RGD PMID:15625724 NCBI chr 3:140,948,108...140,950,907
Ensembl chr 3:140,948,154...140,950,777 		JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:33224970) RGD PMID:33224970 NCBI chr 3:141,042,810...141,044,228
Ensembl chr 3:141,042,810...141,044,184 		JBrowse link
G Defb24 defensin beta 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:141,046,571...141,052,706
Ensembl chr 3:141,046,564...141,052,753 		JBrowse link
G Defb37 defensin beta 37 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,783,532...70,796,798
Ensembl chr16:70,783,554...70,796,892 		JBrowse link
G Defb38 defensin beta 38 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,756,370...70,759,701
Ensembl chr16:70,756,409...70,759,641 		JBrowse link
G Defb39 defensin beta 39 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:70,740,347...70,744,157
Ensembl chr16:70,734,713...70,744,192 		JBrowse link
G Defb4 defensin beta 4 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:70,650,472...70,653,665
Ensembl chr16:70,650,472...70,653,665 		JBrowse link
G Defb40 defensin beta 40 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,824,419...70,827,502
Ensembl chr16:70,824,522...70,827,449 		JBrowse link
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:37,311,888...37,313,579
Ensembl chr15:37,312,308...37,313,370 		JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:15625724), (PMID:20068036)
(MGI:5784982|PMID:20068036)		 RGD PMID:15625724 PMID:20068036 MGI:5784982 NCBI chr16:70,612,985...70,615,389
Ensembl chr16:70,613,146...70,615,467 		JBrowse link
G Defb9 defensin beta 9 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:70,180,692...70,183,602
Ensembl chr16:70,180,771...70,183,554 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2670828|PMID:12884308)		 UniProt
RGD		 PMID:12884308 GO_REF:0000024 MGI:2670828 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478 		JBrowse link
G Drosha drosha ribonuclease III involved_in ISO (PMID:20180804) RGD PMID:20180804 NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688 		JBrowse link
G ENSRNOG00000064390 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr16:70,426,027...70,475,448 JBrowse link
G Galp galanin-like peptide involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:67,684,023...67,703,121
Ensembl chr 1:67,684,025...67,702,269 		JBrowse link
G Gsdmd gasdermin D involved_in ISO (MGI:5796057|PMID:27383986) RGD PMID:27383986 MGI:5796057 NCBI chr 7:107,542,489...107,547,051
Ensembl chr 7:107,542,083...107,547,055 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23877675)		 AgBase
RGD		 PMID:23877675 GO_REF:0000024 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640 		JBrowse link
G Ighm immunoglobulin heavy constant epsilon involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:132,329,269...133,053,426 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:15114670), (PMID:20027291) RGD PMID:15114670 PMID:20027291 NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903 		JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO		 GO_REF:0000107
(MGI:3828868|PMID:19144317)		 Ensembl
RGD		 PMID:19144317 GO_REF:0000107 MGI:3828868 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Il17f interleukin 17F involved_in IEA
ISO		 GO_REF:0000107
(MGI:3828868|PMID:19144317)		 Ensembl
RGD		 PMID:19144317 GO_REF:0000107 MGI:3828868 NCBI chr 9:23,190,094...23,201,482
Ensembl chr 9:23,190,100...23,201,482 		JBrowse link
G Il22ra1 interleukin 22 receptor subunit alpha 1 acts_upstream_of_or_within ISO MGI:4431742 (PMID:22801499) RGD PMID:22801499 NCBI chr 5:147,961,496...147,986,296
Ensembl chr 5:147,961,349...147,986,296 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:15114670), (PMID:20027291) RGD PMID:15114670 PMID:20027291 NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578 		JBrowse link
G Lalba lactalbumin, alpha involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:129,625,531...129,628,034
Ensembl chr 7:129,625,535...129,628,061 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11528597)
(MGI:1097829|PMID:9338787)
GO_REF:0000104
GO_REF:0000033
MGI:1857975 (PMID:12055258)		 RGD
UniProt
GO_Central		 PMID:9338787 PMID:11528597 PMID:12055258 GO_REF:0000033 GO_REF:0000104 MGI:1097829 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586 		JBrowse link
G Lce3e late cornified envelope 3E involved_in ISO (PMID:28634035) RGD PMID:28634035 NCBI chr 2:178,578,488...178,579,661
Ensembl chr 2:178,579,162...178,579,458 		JBrowse link
G Lyc2 lysozyme C type 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:52,887,104...52,894,447
Ensembl chr 7:52,886,883...52,894,446 		JBrowse link
G Lypd8 Ly6/Plaur domain containing 8 involved_in ISO
IBA		 (MGI:5779978|PMID:27027293)
GO_REF:0000033		 RGD
GO_Central		 PMID:27027293 GO_REF:0000033 MGI:5779978 NCBI chr10:42,561,834...42,572,684
Ensembl chr10:42,561,816...42,572,683 		JBrowse link
G Lyz2 lysozyme 2 involved_in IMP
ISO
IEA
IBA		 (MGI:3042773|PMID:14977423)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:14977423 PMID:2840982 GO_REF:0000033 GO_REF:0000118 MGI:3042773, RGD:1599862 NCBI chr 7:52,906,810...52,912,154
Ensembl chr 7:52,906,811...52,912,106 		JBrowse link
G Lyzl4 lysozyme-like 4 NOT|involved_in IDA PMID:22110709 UniProt PMID:22110709 RGD:12793004 NCBI chr 8:121,248,129...121,255,366
Ensembl chr 8:121,248,168...121,255,353 		JBrowse link
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (PMID:11248802) RGD PMID:11248802 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISO
ISS		 (PMID:23753625)
(MGI:6294207|PMID:23753625), (MGI:6294210|PMID:23257510)
GO_REF:0000024		 RGD
UniProt		 PMID:23257510 PMID:23753625 GO_REF:0000024 MGI:6294207 MGI:6294210 NCBI chr 1:209,452,176...209,456,692
Ensembl chr 1:209,452,133...209,458,855 		JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3664578 (PMID:21190736)
(MGI:4818706|PMID:20581831)
(PMID:20581831)		 Ensembl
RGD		 PMID:20581831 PMID:21190736 GO_REF:0000107 MGI:4818706 NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930 (PMID:31182790) RGD PMID:31182790 NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Ngp neutrophilic granule protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:110,394,173...110,397,571
Ensembl chr 8:110,394,203...110,397,570 		JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO (PMID:12791997), (PMID:12796777) RGD PMID:12791997 PMID:12796777 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404 		JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:16865779 RGD:1582113 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202 		JBrowse link
G Optn optineurin involved_in ISO
IEA		 (PMID:21617041)
GO_REF:0000107		 RGD
Ensembl		 PMID:21617041 GO_REF:0000107 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251 		JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) RGD PMID:23892723 NCBI chr 1:202,230,034...202,242,900
Ensembl chr 1:202,232,228...202,242,857 		JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (MGI:5787845|PMID:27184844) RGD PMID:27184844 MGI:5787845 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:16982856), (PMID:21487011) RGD PMID:16982856 PMID:21487011 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955 		JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,544,364...70,546,533
Ensembl chr16:70,513,888...70,546,522 		JBrowse link
G Reg3b regenerating family member 3 beta involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:5488881|PMID:21694778)		 Ensembl
UniProt
RGD		 PMID:21694778 GO_REF:0000024 GO_REF:0000107 MGI:5488881 NCBI chr 4:110,861,775...110,865,015
Ensembl chr 4:110,861,775...110,865,015 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (MGI:5897756|PMID:16931762) RGD PMID:16931762 MGI:5897756 NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723 		JBrowse link
G RGD1306474 similar to RIKEN cDNA 9530003J23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:52,875,842...52,880,716
Ensembl chr 7:52,875,842...52,880,716 		JBrowse link
G Rnase2 ribonuclease A family member 2 NOT|involved_in ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:24,449,618...24,450,427
Ensembl chr15:24,449,611...24,450,479 		JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in ISO
IBA		 (MGI:5902674|PMID:25075772)
GO_REF:0000033		 RGD
GO_Central		 PMID:25075772 GO_REF:0000033 MGI:5902674 NCBI chr15:24,354,305...24,357,289
Ensembl chr15:24,354,303...24,357,328 		JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:144,659,709...144,661,310
Ensembl chr 3:144,659,826...144,661,310 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IEA		 UniProtKB:P22777 (PMID:17032919)
GO_REF:0000107
(MGI:3830955|PMID:17032919)		 RGD
Ensembl		 PMID:17032919 GO_REF:0000107 MGI:3830955 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:6358358)		 Ensembl
RGD		 PMID:6358358 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in ISO (MGI:4939978|PMID:21217009) RGD PMID:21217009 MGI:4939978 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (MGI:5787845|PMID:27184844) RGD PMID:27184844 MGI:5787845 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
MGI:1860885 (PMID:15661922)		 Ensembl
GO_Central
RGD		 PMID:15661922 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796 		JBrowse link
G Tnfrsf14 TNF receptor superfamily member 14 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3582550 (PMID:22801499)		 GO_Central
RGD		 PMID:22801499 GO_REF:0000033 NCBI chr 5:165,486,069...165,494,421
Ensembl chr 5:165,484,262...165,493,703 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within_positive_effect ISO (MGI:6391726|PMID:29887864) RGD PMID:29887864 MGI:6391726 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) RGD PMID:24850429 NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO MGI:3706236 (PMID:24042119) RGD PMID:24042119 NCBI chr 8:108,236,838...108,240,056
Ensembl chr 8:108,236,838...108,240,056 		JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:32616672)
GO_REF:0000107
(PMID:14665435), (PMID:14871399)		 UniProt
RGD
Ensembl		 PMID:14665435 PMID:14871399 PMID:32616672 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100 		JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISS
ISO		 GO_REF:0000024
(MGI:7581102|PMID:25425233)
(PMID:25425233)		 UniProt
RGD		 PMID:25425233 GO_REF:0000024 MGI:7581102 NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741 		JBrowse link
G Elane elastase, neutrophil expressed involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100 		JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1930003 (PMID:23241959)		 GO_Central
RGD		 PMID:23241959 GO_REF:0000033 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203 		JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:12,749,821...12,762,547
Ensembl chr 9:12,749,852...12,760,779 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO MGI:3706236 (PMID:24042119) RGD PMID:24042119 NCBI chr 8:108,236,838...108,240,056
Ensembl chr 8:108,236,838...108,240,056 		JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226 		JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 acts_upstream_of_or_within ISO MGI:4819800 (PMID:20643340) RGD PMID:20643340 NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    biological process involved in interspecies interaction between organisms 1976
      response to other organism 1850
        defense response to other organism 1305
          defense response to bacterium 365
            defense response to Gram-negative bacterium 98
              G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium 0
              biosynthetic process of antibacterial peptides active against Gram-negative bacteria + 1
              neutrophil-mediated killing of gram-negative bacterium + 8
Path 2
Term Annotations click to browse term
  biological_process 20413
    response to stimulus 10920
      response to external stimulus 2746
        response to external biotic stimulus 1854
          response to other organism 1850
            response to bacterium 997
              defense response to bacterium 365
                defense response to Gram-negative bacterium 98
                  G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium 0
                  biosynthetic process of antibacterial peptides active against Gram-negative bacteria + 1
                  neutrophil-mediated killing of gram-negative bacterium + 8
paths to the root